KEGG pathway |
Name |
hsa00010
|
Glycolysis / Gluconeogenesis
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
-
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
-
|
Likely pathogenic |
Fructose-biphosphatase deficiency [MONDO:MONDO:0009251,MedGen:C0016756,OMIM:229700,Orphanet:348] |
|
-
|
Likely pathogenic |
Glycogen storage disease, type VII [MONDO:MONDO:0009295,MedGen:C0017926,OMIM:232800,Orphanet:371] |
|
-
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
-
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
-
|
LP/P |
Pyruvate kinase deficiency of red cells (PKRD) [MIM:266200] |
|
-
|
Pathogenic/Likely pathogenic |
not provided|Pyruvate kinase deficiency of red cells [MedGen:C3661900|MONDO:MONDO:0009950,MedGen:C0340968,OMIM:266200,Orphanet:766] |
|
-
|
LP/P |
Phosphoglycerate kinase 1 deficiency (PGK1D) [MIM:300653] |
|
-
|
LP/P |
Pyruvate dehydrogenase E1-alpha deficiency (PDHAD) [MIM:312170] |
|
-
|
LP/P |
Diabetes mellitus, permanent neonatal, 1 (PNDM1) [MIM:606176] |
|
-
|
Likely pathogenic |
Maturity onset diabetes mellitus in young [Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
-
|
Pathogenic |
Glycogen storage disease due to lactate dehydrogenase M-subunit deficiency [MONDO:MONDO:0013047,MedGen:C2931743,OMIM:612933,Orphanet:284426] |
|
-
|
Likely pathogenic |
Pyruvate dehydrogenase E1-beta deficiency [MONDO:MONDO:0013580,MedGen:C3279841,OMIM:614111,Orphanet:255138,Orphanet:765] |
|
-
|
LP/P |
Congenital disorder of glycosylation 1T (CDG1T) [MIM:614921] |
|
-
|
LP/P |
Microphthalmia, isolated, 8 (MCOP8) [MIM:615113] |
|
-
|
Likely pathogenic |
Isolated microphthalmia 8 [MONDO:MONDO:0014050,MedGen:C3554524,OMIM:615113,Orphanet:2542] |
|
.
|
- |
- |
|
rs1018955701
|
- |
- |
|
rs1041969
|
LB/B |
- |
|
rs104894009
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs104894015
|
LP/P |
Hyperinsulinemic hypoglycemia, familial, 3 (HHF3) [MIM:602485] |
|
rs1064794848
|
LP/P |
Neurodevelopmental disorder with visual defects and brain anomalies (NEDVIBA) [MIM:618547] |
|
rs1064794848
|
Pathogenic/Likely pathogenic |
not provided|Neurodevelopmental disorder with visual defects and brain anomalies|Retinitis pigmentosa|Inborn genetic diseases|Hemolytic anemia due to hexokinase deficiency|Retinitis pigmentosa 79|Autism spectrum disorder [MedGen:C3661900|MONDO:MONDO:0032807,MedGen:C5231404,OMIM:618547|Human Phenotype Ontology:HP:0000547,MONDO:MONDO:0019200,MeSH:D012174,MedGen:C0035334,OMIM:268000,OMIM:PS268000,Orphanet:791|MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0009340,MedGen:C3150343,OMIM:235700,Orphanet:90031|MONDO:MONDO:0044320,MedGen:C4479526,OMIM:617460|MONDO:MONDO:0005258,MeSH:D000067877,MedGen:C1510586,Orphanet:106] |
|
rs1064795154
|
LP/P |
Neurodevelopmental disorder with visual defects and brain anomalies (NEDVIBA) [MIM:618547] |
|
rs1126673
|
- |
- |
|
rs1131691416
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1131691416
|
Pathogenic/Likely pathogenic |
not provided|Maturity-onset diabetes of the young type 2|Type 2 diabetes mellitus [MedGen:C3661900|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853]; Hyperinsulinism due to glucokinase deficiency [MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299]; Permanent neonatal diabetes mellitus 1 [MONDO:MONDO:0100165,MedGen:C5393570,OMIM:606176]; Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs115638369
|
- |
- |
|
rs1167329263
|
- |
- |
|
rs1167329263
|
LP/P |
Pyruvate kinase deficiency of red cells (PKRD) [MIM:266200] |
|
rs1168600424
|
- |
- |
|
rs1170817007
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs118204083
|
LP/P |
Pyruvate kinase deficiency of red cells (PKRD) [MIM:266200] |
|
rs118204089
|
Pathogenic |
Pyruvate kinase deficiency of red cells [MONDO:MONDO:0009950,MedGen:C0340968,OMIM:266200,Orphanet:766] |
|
rs121909534
|
Pathogenic |
HNSHA due to aldolase A deficiency [MONDO:MONDO:0012747,MedGen:C0272066,OMIM:611881,Orphanet:57] |
|
rs121912707
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Seizure|Pyridoxine-dependent epilepsy caused by ALDH7A1 mutant [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|Human Phenotype Ontology:HP:0001250,Human Phenotype Ontology:HP:0001275,Human Phenotype Ontology:HP:0001303,Human Phenotype Ontology:HP:0002125,Human Phenotype Ontology:HP:0002182,Human Phenotype Ontology:HP:0002279,Human Phenotype Ontology:HP:0002306,Human Phenotype Ontology:HP:0002348,Human Phenotype Ontology:HP:0002391,Human Phenotype Ontology:HP:0002417,Human Phenotype Ontology:HP:0002430,Human Phenotype Ontology:HP:0002431,Human Phenotype Ontology:HP:0002432,Human Phenotype Ontology:HP:0002434,Human Phenotype Ontology:HP:0002437,Human Phenotype Ontology:HP:0002466,Human Phenotype Ontology:HP:0002479,Human Phenotype Ontology:HP:0002794,Human Phenotype Ontology:HP:0006997,Human Phenotype Ontology:HP:0010520,MedGen:C0036572|MONDO:MONDO:0020741,MedGen:CN293409] |
|
rs121912711
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs121918189
|
- |
- |
|
rs121918189
|
Pathogenic |
Fructose-biphosphatase deficiency [MONDO:MONDO:0009251,MedGen:C0016756,OMIM:229700,Orphanet:348] |
|
rs121918190
|
Pathogenic |
Fructose-biphosphatase deficiency [MONDO:MONDO:0009251,MedGen:C0016756,OMIM:229700,Orphanet:348] |
|
rs121964925
|
LP/P |
Erythrocytosis, familial, 8 (ECYT8) [MIM:222800] |
|
rs121964988
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs121964991
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs121964993
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs1227427396
|
LP/P |
Pyruvate kinase deficiency of red cells (PKRD) [MIM:266200] |
|
rs1229984
|
LB/B |
- |
|
rs1239029841
|
LP/P |
Pyruvate kinase deficiency of red cells (PKRD) [MIM:266200] |
|
rs1256830271
|
- |
- |
|
rs1272572107
|
Pathogenic/Likely pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs1272792336
|
- |
- |
|
rs1280636156
|
- |
- |
|
rs1286804191
|
LP/P |
Diabetes mellitus, permanent neonatal, 1 (PNDM1) [MIM:606176] |
|
rs1301021797
|
LP/P |
Congenital disorder of glycosylation 1T (CDG1T) [MIM:614921] |
|
rs1311982393
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1320810473
|
LP/P |
Congenital disorder of glycosylation 1T (CDG1T) [MIM:614921] |
|
rs1331843613
|
- |
- |
|
rs1332966015
|
Pathogenic |
not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1348837644
|
- |
- |
|
rs1360415315
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1360415315
|
Pathogenic |
not provided|Maturity-onset diabetes of the young type 2|Hyperinsulinism due to glucokinase deficiency [MedGen:C3661900|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299]; Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552]; Permanent neonatal diabetes mellitus [MONDO:MONDO:0100164,MedGen:C1833104,OMIM:PS606176,Orphanet:99885]; Type 2 diabetes mellitus|Maturity onset diabetes mellitus in young|Monogenic diabetes [Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs1375656631
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs137852530
|
LB/B |
- |
|
rs137852533
|
LP/P |
Phosphoglycerate kinase 1 deficiency (PGK1D) [MIM:300653] |
|
rs137852539
|
Pathogenic |
Glycogen storage disease due to phosphoglycerate kinase 1 deficiency [MONDO:MONDO:0010392,MedGen:C1970848,OMIM:300653,Orphanet:713] |
|
rs137853258
|
LP/P |
Pyruvate dehydrogenase E1-alpha deficiency (PDHAD) [MIM:312170] |
|
rs137853582
|
- |
- |
|
rs138887023
|
- |
- |
|
rs138893744
|
Pathogenic |
Glycogen storage disease, type VII [MONDO:MONDO:0009295,MedGen:C0017926,OMIM:232800,Orphanet:371] |
|
rs139273956
|
- |
- |
|
rs140960775
|
- |
- |
|
rs141315355
|
- |
- |
|
rs141623265
|
- |
- |
|
rs143485300
|
- |
- |
|
rs1441649062
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs144723656
|
Pathogenic |
Maturity-onset diabetes of the young type 2|not provided [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:CN517202] |
|
rs144723656
|
Pathogenic/Likely pathogenic |
not provided|Maturity onset diabetes mellitus in young [MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs144739734
|
- |
- |
|
rs146153216
|
- |
- |
|
rs146556418
|
- |
- |
|
rs1470521850
|
Pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs147065275
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1471862905
|
- |
- |
|
rs1476637197
|
Pathogenic |
Maturity-onset diabetes of the young type 2|Monogenic diabetes [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs148311934
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs148311934
|
Pathogenic |
Maturity-onset diabetes of the young type 2|not provided|Maturity onset diabetes mellitus in young|Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552]; Type 2 diabetes mellitus [Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853]; Hyperinsulinism due to glucokinase deficiency [MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299]; Permanent neonatal diabetes mellitus 1|Monogenic diabetes [MONDO:MONDO:0100165,MedGen:C5393570,OMIM:606176|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs1490487177
|
- |
- |
|
rs149408684
|
- |
- |
|
rs150526754
|
- |
- |
|
rs150939574
|
- |
- |
|
rs1554334872
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2|Maturity onset diabetes mellitus in young [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1554334905
|
Likely pathogenic |
not specified|not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [MedGen:CN169374|MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1554335132
|
Pathogenic |
not specified|Maturity onset diabetes mellitus in young|Monogenic diabetes [MedGen:CN169374|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs1554335135
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1554335135
|
Pathogenic/Likely pathogenic |
not provided|Maturity onset diabetes mellitus in young [MedGen:CN517202|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1554335761
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1555933963
|
Pathogenic/Likely pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency|not provided|Pyruvate dehydrogenase complex deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243|MedGen:C3661900|MONDO:MONDO:0019169,MedGen:C0034345,OMIM:PS312170,Orphanet:765,Orphanet:79243] |
|
rs1562711915
|
Pathogenic |
not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1562715426
|
Pathogenic |
not provided|Maturity onset diabetes mellitus in young [MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1562717053
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1562717053
|
Pathogenic |
not provided|Maturity-onset diabetes of the young type 2 [MedGen:C3661900|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552]; Permanent neonatal diabetes mellitus 1 [MONDO:MONDO:0100165,MedGen:C5393570,OMIM:606176]; Type 2 diabetes mellitus [Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853]; Hyperinsulinism due to glucokinase deficiency|Monogenic diabetes|Maturity onset diabetes mellitus in young [MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1564557037
|
LP/P |
Neurodevelopmental disorder with visual defects and brain anomalies (NEDVIBA) [MIM:618547] |
|
rs1564557037
|
Likely pathogenic |
Neurodevelopmental disorder with visual defects and brain anomalies|Neurodevelopmental abnormality|Charcot-Marie-Tooth disease type 4G [MONDO:MONDO:0032807,MedGen:C5231404,OMIM:618547|Human Phenotype Ontology:HP:0012759,MedGen:C4022737|MONDO:MONDO:0011534,MedGen:C1854449,OMIM:605285,Orphanet:99953] |
|
rs1583591303
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1583599303
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1583599303
|
Pathogenic/Likely pathogenic/Likely risk allele |
not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1750309299
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1750388096
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs17853396
|
LB/B |
- |
|
rs1831150965
|
Likely pathogenic |
Hereditary fructosuria [Human Phenotype Ontology:HP:0005973,MONDO:MONDO:0009249,MedGen:C0016751,OMIM:229600,Orphanet:469] |
|
rs184074326
|
- |
- |
|
rs184618766
|
- |
- |
|
rs193922272
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs193922281
|
Pathogenic/Likely pathogenic |
Maturity-onset diabetes of the young type 2|not provided|Maturity onset diabetes mellitus in young [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs193922282
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs193922282
|
LP/P |
Diabetes mellitus, permanent neonatal, 1 (PNDM1) [MIM:606176] |
|
rs193922290
|
Likely pathogenic/Likely risk allele |
Maturity-onset diabetes of the young type 2|Maturity onset diabetes mellitus in young [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs193922297
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs193922311
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs193922319
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2|Maturity onset diabetes mellitus in young|Monogenic diabetes [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs193922327
|
Pathogenic/Likely pathogenic |
Maturity-onset diabetes of the young type 2|not provided [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900] |
|
rs199624420
|
- |
- |
|
rs200000745
|
- |
- |
|
rs200196486
|
- |
- |
|
rs200244541
|
- |
- |
|
rs200544560
|
- |
- |
|
rs200556774
|
- |
- |
|
rs200969445
|
Pathogenic |
Oligosynaptic infertility|Azoospermia|Spermatogenic failure 70 [MONDO:MONDO:0009776,MedGen:C0403810,OMIM:258150,Orphanet:217034|Human Phenotype Ontology:HP:0000027,MONDO:MONDO:0100459,MeSH:D053713,MedGen:C0004509|MONDO:MONDO:0030733,MedGen:C5676962,OMIM:619828] |
|
rs201321507
|
- |
- |
|
rs201745983
|
- |
- |
|
rs201934016
|
- |
- |
|
rs201948406
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Inborn genetic diseases [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs202226446
|
- |
- |
|
rs2032247686
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs2032282970
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs2063174067
|
LP/P |
Pyruvate dehydrogenase E1-alpha deficiency (PDHAD) [MIM:312170] |
|
rs2063189233
|
Pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs2063213272
|
Pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs2066702
|
LB/B |
- |
|
rs2096273902
|
Likely pathogenic |
not provided|Maturity onset diabetes mellitus in young|Monogenic diabetes [MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs2096280050
|
US |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs2096281827
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs2118343224
|
Pathogenic |
Hereditary fructosuria [Human Phenotype Ontology:HP:0005973,MONDO:MONDO:0009249,MedGen:C0016751,OMIM:229600,Orphanet:469] |
|
rs2128820597
|
Pathogenic/Likely pathogenic |
Maturity-onset diabetes of the young type 2|Monogenic diabetes|not provided [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|MedGen:C3661900] |
|
rs2128821509
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs2135856711
|
Pathogenic |
Glycogen storage disease, type VII [MONDO:MONDO:0009295,MedGen:C0017926,OMIM:232800,Orphanet:371] |
|
rs2147176072
|
Likely pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs2147178249
|
Pathogenic |
not provided|Pyruvate dehydrogenase E1-alpha deficiency [MedGen:C3661900|MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs2147180839
|
Likely pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs2147180851
|
Likely pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs2147184502
|
Likely pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs2151019295
|
Pathogenic/Likely pathogenic |
HNSHA due to aldolase A deficiency [MONDO:MONDO:0012747,MedGen:C0272066,OMIM:611881,Orphanet:57] |
|
rs2458502
|
- |
- |
|
rs28359542
|
LB/B |
- |
|
rs28383586
|
LB/B |
- |
|
rs284797
|
- |
- |
|
rs28730628
|
LB/B |
- |
|
rs35229514
|
- |
- |
|
rs35385902
|
LB/B |
- |
|
rs367861880
|
- |
- |
|
rs371767574
|
- |
- |
|
rs371807385
|
- |
- |
|
rs372660425
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs374118874
|
- |
- |
|
rs376093116
|
- |
- |
|
rs376297762
|
- |
- |
|
rs376690171
|
- |
- |
|
rs377699817
|
- |
- |
|
rs398122379
|
LP/P |
Hexokinase deficiency (HK deficiency) [MIM:235700] |
|
rs539728659
|
- |
- |
|
rs541509845
|
- |
- |
|
rs545372800
|
- |
- |
|
rs546847108
|
- |
- |
|
rs547918064
|
- |
- |
|
rs547918064
|
Likely pathogenic |
not provided|Isolated microphthalmia 8 [MedGen:C3661900|MONDO:MONDO:0014050,MedGen:C3554524,OMIM:615113,Orphanet:2542] |
|
rs555935217
|
- |
- |
|
rs56251804
|
- |
- |
|
rs566453434
|
Pathogenic/Likely pathogenic |
not provided|Fructose-biphosphatase deficiency [MedGen:C3661900|MONDO:MONDO:0009251,MedGen:C0016756,OMIM:229700,Orphanet:348] |
|
rs573040804
|
- |
- |
|
rs587780346
|
Pathogenic/Likely pathogenic |
Gestational diabetes|not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [Human Phenotype Ontology:HP:0009800,MONDO:MONDO:0005406,MedGen:C0085207|MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs671
|
- |
- |
|
rs671
|
LP/P |
AMED syndrome, digenic (AMEDS) [MIM:619151] |
|
rs74451421
|
- |
- |
|
rs746913146
|
Pathogenic |
not provided|Maturity onset diabetes mellitus in young|Monogenic diabetes [MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs747097960
|
LP/P |
Pyruvate kinase deficiency of red cells (PKRD) [MIM:266200] |
|
rs747209153
|
- |
- |
|
rs747837917
|
- |
- |
|
rs747971446
|
- |
- |
|
rs748408705
|
- |
- |
|
rs748682601
|
Pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs748947397
|
- |
- |
|
rs750026492
|
Pathogenic/Likely pathogenic |
Hereditary fructosuria [Human Phenotype Ontology:HP:0005973,MONDO:MONDO:0009249,MedGen:C0016751,OMIM:229600,Orphanet:469] |
|
rs750389182
|
- |
- |
|
rs750660594
|
- |
- |
|
rs751972865
|
LP/P |
Erythrocytosis, familial, 8 (ECYT8) [MIM:222800] |
|
rs752807581
|
- |
- |
|
rs753407393
|
- |
- |
|
rs754185312
|
- |
- |
|
rs754994587
|
- |
- |
|
rs755461904
|
- |
- |
|
rs755761896
|
- |
- |
|
rs756704521
|
- |
- |
|
rs757087726
|
Pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs757746489
|
- |
- |
|
rs757985056
|
- |
- |
|
rs758609113
|
Pathogenic/Likely pathogenic |
not provided|Fructose-biphosphatase deficiency [MedGen:CN517202|MONDO:MONDO:0009251,MedGen:C0016756,OMIM:229700,Orphanet:348] |
|
rs758737171
|
LP/P |
Hyperinsulinemic hypoglycemia, familial, 3 (HHF3) [MIM:602485] |
|
rs75967634
|
- |
- |
|
rs759725155
|
- |
- |
|
rs759933654
|
- |
- |
|
rs760185950
|
- |
- |
|
rs760379773
|
- |
- |
|
rs760971491
|
- |
- |
|
rs761042153
|
- |
- |
|
rs761295869
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs762200045
|
- |
- |
|
rs763392896
|
- |
- |
|
rs767632371
|
- |
- |
|
rs768176085
|
- |
- |
|
rs768361068
|
- |
- |
|
rs768697532
|
- |
- |
|
rs769268803
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs769268803
|
Pathogenic |
not provided|Permanent neonatal diabetes mellitus [MedGen:C3661900|MONDO:MONDO:0100164,MedGen:C1833104,OMIM:PS606176,Orphanet:99885]; Hyperinsulinism due to glucokinase deficiency [MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299]; Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552]; Type 2 diabetes mellitus|Maturity-onset diabetes of the young type 2 [Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs769512330
|
- |
- |
|
rs769724893
|
LB/B |
- |
|
rs769763635
|
- |
- |
|
rs769879612
|
- |
- |
|
rs770231054
|
Likely pathogenic |
Maturity onset diabetes mellitus in young [Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs770331582
|
- |
- |
|
rs770807520
|
- |
- |
|
rs771107373
|
- |
- |
|
rs772238965
|
- |
- |
|
rs772754004
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs773503933
|
- |
- |
|
rs775111586
|
- |
- |
|
rs775156542
|
- |
- |
|
rs776400068
|
- |
- |
|
rs776421832
|
- |
- |
|
rs777019739
|
- |
- |
|
rs777954556
|
LP/P |
Lactate dehydrogenase B deficiency (LDHBD) [MIM:614128] |
|
rs779006912
|
- |
- |
|
rs779314973
|
- |
- |
|
rs779828856
|
- |
- |
|
rs780442649
|
- |
- |
|
rs780715532
|
- |
- |
|
rs781110394
|
- |
- |
|
rs781222092
|
Pathogenic |
Deficiency of bisphosphoglycerate mutase [MONDO:MONDO:0009113,MedGen:C1291620,OMIM:222800,Orphanet:714] |
|
rs781507152
|
- |
- |
|
rs794727839
|
Likely pathogenic |
not provided|Maturity-onset diabetes of the young type 2|Maturity onset diabetes mellitus in young|Monogenic diabetes|not specified [MedGen:C3661900|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|MedGen:CN169374] |
|
rs796052271
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs80356655
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs80356655
|
Pathogenic |
Maturity-onset diabetes of the young type 2|not provided|Permanent neonatal diabetes mellitus 1|Maturity onset diabetes mellitus in young|Type 2 diabetes mellitus|Hyperinsulinism due to glucokinase deficiency|Monogenic diabetes [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900|MONDO:MONDO:0100165,MedGen:C5393570,OMIM:606176|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853|MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs863224149
|
Pathogenic |
not provided|Pyruvate dehydrogenase E1-alpha deficiency [MedGen:C3661900|MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs863224150
|
Pathogenic |
not provided|Pyruvate dehydrogenase E1-alpha deficiency|Pyruvate dehydrogenase complex deficiency [MedGen:C3661900|MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243|MONDO:MONDO:0019169,MedGen:C0034345,OMIM:PS312170,Orphanet:765,Orphanet:79243] |
|
rs864622558
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs866904446
|
Pathogenic/Likely pathogenic |
Glycogen storage disease, type VII [MONDO:MONDO:0009295,MedGen:C0017926,OMIM:232800,Orphanet:371] |
|
rs981505482
|
LP/P |
Pyruvate kinase deficiency of red cells (PKRD) [MIM:266200] |
hsa00020
|
Citrate cycle (TCA cycle)
|
dbSNP |
Type |
Disease name |
|
-
|
Pathogenic |
Paragangliomas 1 [MONDO:MONDO:0008192,MedGen:C3494181,OMIM:168000,Orphanet:29072] |
|
-
|
Pathogenic |
Mitochondrial DNA depletion syndrome 9 [MONDO:MONDO:0009504,MedGen:C3151476,OMIM:245400,Orphanet:17] |
|
-
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
-
|
LP/P |
Pyruvate dehydrogenase E1-alpha deficiency (PDHAD) [MIM:312170] |
|
-
|
Likely pathogenic |
Pyruvate dehydrogenase E1-beta deficiency [MONDO:MONDO:0013580,MedGen:C3279841,OMIM:614111,Orphanet:255138,Orphanet:765] |
|
.
|
- |
- |
|
rs1040177874
|
- |
- |
|
rs104894302
|
Pathogenic |
Paragangliomas 1|Hereditary cancer-predisposing syndrome|Paragangliomas with sensorineural hearing loss [MONDO:MONDO:0008192,MedGen:C3494181,OMIM:168000,Orphanet:29072|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MedGen:C1868633]; Cowden syndrome 3 [MONDO:MONDO:0014045,MedGen:CN166604,Orphanet:201]; Pheochromocytoma [Human Phenotype Ontology:HP:0002666,MONDO:MONDO:0008233,MedGen:C0031511,OMIM:171300,Orphanet:29072]; Carney-Stratakis syndrome [MONDO:MONDO:0011740,MedGen:C1847319,OMIM:606864,Orphanet:97286] |
|
rs1057519736
|
LB/B |
- |
|
rs1057519736
|
Pathogenic; risk factor |
Acute myeloid leukemia|Acute myocardial infarction [Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|MONDO:MONDO:0004781,MedGen:C0155626] |
|
rs1057519906
|
LB/B |
- |
|
rs1057519906
|
LP/P |
Glioma (GLM) [MIM:137800] |
|
rs1057519906
|
Likely pathogenic; risk factor |
Neoplasm of the large intestine|Neoplasm of brain|Brainstem glioma|Acute myeloid leukemia|Hepatocellular carcinoma|Acute myocardial infarction [Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MONDO:MONDO:0004781,MedGen:C0155626] |
|
rs1060503769
|
Pathogenic |
Carney-Stratakis syndrome [MONDO:MONDO:0011740,MedGen:C1847319,OMIM:606864,Orphanet:97286]; Pheochromocytoma [Human Phenotype Ontology:HP:0002666,MONDO:MONDO:0008233,MedGen:C0031511,OMIM:171300,Orphanet:29072]; Cowden syndrome 3 [MONDO:MONDO:0014045,MedGen:CN166604,Orphanet:201]; Paragangliomas with sensorineural hearing loss|Hereditary cancer-predisposing syndrome [MedGen:C1868633|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] |
|
rs1131691065
|
Pathogenic |
Hereditary cancer-predisposing syndrome|Pheochromocytoma [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0002666,MONDO:MONDO:0008233,MedGen:C0031511,OMIM:171300,Orphanet:29072]; Paragangliomas with sensorineural hearing loss [MedGen:C1868633]; Cowden syndrome 3 [MONDO:MONDO:0014045,MedGen:CN166604,Orphanet:201]; Carney-Stratakis syndrome|Mitochondrial complex 2 deficiency, nuclear type 3 [MONDO:MONDO:0011740,MedGen:C1847319,OMIM:606864,Orphanet:97286|MONDO:MONDO:0030937,MedGen:C5436934,OMIM:619167] |
|
rs1200905118
|
- |
- |
|
rs1213395414
|
- |
- |
|
rs121913499
|
US |
Colorectal cancer |
|
rs121913499
|
Pathogenic/Likely pathogenic |
Lung adenocarcinoma|Breast neoplasm|Neoplasm of brain|Hepatocellular carcinoma|Astrocytoma|Medulloblastoma|Malignant melanoma of skin|Transitional cell carcinoma of the bladder|Neoplasm of the large intestine|Multiple myeloma|Prostate adenocarcinoma|Brainstem glioma|Glioblastoma|Myelodysplastic syndrome|Acute myeloid leukemia|Adenoid cystic carcinoma|not provided|Enchondromatosis|Enchondromatosis [Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0009592,MONDO:MONDO:0019781,MeSH:D001254,MedGen:C0004114|Human Phenotype Ontology:HP:0002885,MONDO:MONDO:0007959,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:616|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|MONDO:MONDO:0004971,MeSH:D003528,MedGen:C0010606|MedGen:C3661900|Human Phenotype Ontology:HP:0005701,MONDO:MONDO:0008145,MedGen:C0014084,OMIM:166000,Orphanet:296|Human Phenotype Ontology:HP:0005701,MONDO:MONDO:0008145,MedGen:C0014084,OMIM:166000,Orphanet:296]; Maffucci syndrome|Glioma susceptibility 1|Maffucci syndrome [MONDO:MONDO:0013808,MedGen:C0024454,OMIM:614569,Orphanet:163634|MONDO:MONDO:0024498,MedGen:C2750850,OMIM:137800|MONDO:MONDO:0013808,MedGen:C0024454,OMIM:614569,Orphanet:163634] |
|
rs121913500
|
US |
A glioma sample |
|
rs121913500
|
Pathogenic/Likely pathogenic |
Glioblastoma multiforme, somatic|Transitional cell carcinoma of the bladder|Myelodysplastic syndrome|Medulloblastoma|Malignant melanoma of skin|Hepatocellular carcinoma|Lung adenocarcinoma|Brainstem glioma|Breast neoplasm|Prostate adenocarcinoma|Multiple myeloma|Neoplasm of brain|Acute myeloid leukemia|Oligodendroglioma|Adenoid cystic carcinoma|Neoplasm of the large intestine|Astrocytoma|Glioblastoma|Metaphyseal chondromatosis with D-2-hydroxyglutaric aciduria|not provided|Glioma susceptibility 1|Enchondromatosis|Metaphyseal chondromatosis [MedGen:C4016231|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0002885,MONDO:MONDO:0007959,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:616|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0033681,MONDO:MONDO:0016695,MeSH:D009837,MedGen:C0028945,Orphanet:251627|MONDO:MONDO:0004971,MeSH:D003528,MedGen:C0010606|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0009592,MONDO:MONDO:0019781,MeSH:D001254,MedGen:C0004114|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0013941,MedGen:C3553958,OMIM:614875,Orphanet:99646|MedGen:C3661900|MONDO:MONDO:0024498,MedGen:C2750850,OMIM:137800|Human Phenotype Ontology:HP:0005701,MONDO:MONDO:0008145,MedGen:C0014084,OMIM:166000,Orphanet:296|] |
|
rs121913502
|
LP/P |
D-2-hydroxyglutaric aciduria 2 (D2HGA2) [MIM:613657] |
|
rs121913502
|
Pathogenic/Likely pathogenic |
D-2-hydroxyglutaric aciduria 2|Squamous cell carcinoma of the head and neck|not provided|Acute myeloid leukemia|Neoplasm of the large intestine|Myelodysplastic syndrome|Multiple myeloma|Inborn genetic diseases [MONDO:MONDO:0013345,MedGen:C3150909,OMIM:613657,Orphanet:79315|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MedGen:C3661900|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MeSH:D030342,MedGen:C0950123] |
|
rs121913503
|
Pathogenic/Likely pathogenic; risk factor |
Hepatocellular carcinoma|Acute myeloid leukemia|Neoplasm of the large intestine|Neoplasm of brain|Brainstem glioma|Acute myocardial infarction [Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|MONDO:MONDO:0004781,MedGen:C0155626] |
|
rs121913503
|
LP/P |
Glioma (GLM) [MIM:137800] |
|
rs121913503
|
Pathogenic/Likely pathogenic; risk factor |
Acute myeloid leukemia|Hepatocellular carcinoma|Neoplasm of brain|Myelodysplastic syndrome|Neoplasm of the large intestine|Brainstem glioma|Acute myocardial infarction [Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|MONDO:MONDO:0004781,MedGen:C0155626] |
|
rs121964988
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs121964991
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs121964993
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs1233115152
|
- |
- |
|
rs1250941205
|
- |
- |
|
rs1252881714
|
- |
- |
|
rs1256830271
|
- |
- |
|
rs1258494752
|
LP/P |
Pyruvate carboxylase deficiency (PC deficiency) [MIM:266150] |
|
rs1272572107
|
Pathogenic/Likely pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs1304729997
|
- |
- |
|
rs137853258
|
LP/P |
Pyruvate dehydrogenase E1-alpha deficiency (PDHAD) [MIM:312170] |
|
rs139584437
|
- |
- |
|
rs140626260
|
Pathogenic/Likely pathogenic |
Mitochondrial DNA depletion syndrome 9 [MONDO:MONDO:0009504,MedGen:C3151476,OMIM:245400,Orphanet:17] |
|
rs141728876
|
- |
- |
|
rs1423978863
|
Pathogenic |
Hereditary cancer-predisposing syndrome|Mitochondrial complex II deficiency, nuclear type 1 [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0100294,MedGen:C5700310,OMIM:252011,Orphanet:3208]; Paragangliomas 5 [MONDO:MONDO:0013602,MedGen:C3279992,OMIM:614165,Orphanet:29072] |
|
rs148890709
|
- |
- |
|
rs148943214
|
- |
- |
|
rs150561917
|
- |
- |
|
rs1555015018
|
Likely pathogenic |
Pyruvate carboxylase deficiency [MONDO:MONDO:0009949,MedGen:C0034341,OMIM:266150,Orphanet:3008] |
|
rs1555629667
|
- |
- |
|
rs1555632876
|
- |
- |
|
rs1555933963
|
Pathogenic/Likely pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency|not provided|Pyruvate dehydrogenase complex deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243|MedGen:C3661900|MONDO:MONDO:0019169,MedGen:C0034345,OMIM:PS312170,Orphanet:765,Orphanet:79243] |
|
rs1560992565
|
Pathogenic |
Mitochondrial complex II deficiency, nuclear type 1 [MONDO:MONDO:0100294,MedGen:C5700310,OMIM:252011,Orphanet:3208]; Paragangliomas 5|Hereditary cancer-predisposing syndrome|Paragangliomas 5 [MONDO:MONDO:0013602,MedGen:C3279992,OMIM:614165,Orphanet:29072|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0013602,MedGen:C3279992,OMIM:614165,Orphanet:29072] |
|
rs1573369925
|
Pathogenic |
Mitochondrial DNA depletion syndrome 9 [MONDO:MONDO:0009504,MedGen:C3151476,OMIM:245400,Orphanet:17] |
|
rs200969445
|
Pathogenic |
Oligosynaptic infertility|Azoospermia|Spermatogenic failure 70 [MONDO:MONDO:0009776,MedGen:C0403810,OMIM:258150,Orphanet:217034|Human Phenotype Ontology:HP:0000027,MONDO:MONDO:0100459,MeSH:D053713,MedGen:C0004509|MONDO:MONDO:0030733,MedGen:C5676962,OMIM:619828] |
|
rs2032247686
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs2032282970
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs2063174067
|
LP/P |
Pyruvate dehydrogenase E1-alpha deficiency (PDHAD) [MIM:312170] |
|
rs2063189233
|
Pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs2063213272
|
Pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs2146127288
|
Likely pathogenic |
Infantile cerebellar-retinal degeneration [MONDO:MONDO:0013802,MedGen:C3281192,OMIM:614559,Orphanet:313850] |
|
rs2147176072
|
Likely pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs2147178249
|
Pathogenic |
not provided|Pyruvate dehydrogenase E1-alpha deficiency [MedGen:C3661900|MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs2147180839
|
Likely pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs2147180851
|
Likely pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs2147184502
|
Likely pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs267606870
|
LP/P |
D-2-hydroxyglutaric aciduria 2 (D2HGA2) [MIM:613657] |
|
rs267607097
|
LP/P |
Mitochondrial DNA depletion syndrome 9 (MTDPS9) [MIM:245400] |
|
rs267607098
|
Pathogenic |
Mitochondrial DNA depletion syndrome 9 [MONDO:MONDO:0009504,MedGen:C3151476,OMIM:245400,Orphanet:17] |
|
rs267607099
|
LP/P |
Mitochondrial DNA depletion syndrome 9 (MTDPS9) [MIM:245400] |
|
rs28359542
|
LB/B |
- |
|
rs28383586
|
LB/B |
- |
|
rs28940589
|
LP/P |
Pyruvate carboxylase deficiency (PC deficiency) [MIM:266150] |
|
rs28940590
|
LP/P |
Pyruvate carboxylase deficiency (PC deficiency) [MIM:266150] |
|
rs35494829
|
- |
- |
|
rs369153479
|
Pathogenic |
Mitochondrial DNA depletion syndrome 9 [MONDO:MONDO:0009504,MedGen:C3151476,OMIM:245400,Orphanet:17] |
|
rs370866394
|
- |
- |
|
rs371807385
|
- |
- |
|
rs376297762
|
- |
- |
|
rs377518755
|
- |
- |
|
rs532952188
|
- |
- |
|
rs537907558
|
- |
- |
|
rs546847108
|
- |
- |
|
rs564792232
|
- |
- |
|
rs575833641
|
- |
- |
|
rs745389409
|
- |
- |
|
rs747837917
|
- |
- |
|
rs747951792
|
- |
- |
|
rs748682601
|
Pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs753407393
|
- |
- |
|
rs753617532
|
- |
- |
|
rs755024692
|
Pathogenic |
not provided|Optic atrophy 9 [MedGen:C3661900|MONDO:MONDO:0014571,MedGen:C4225384,OMIM:616289] |
|
rs755461904
|
- |
- |
|
rs756712426
|
US |
Retinitis pigmentosa 90 (RP90) [MIM:619007] |
|
rs757087726
|
Pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs759846791
|
- |
- |
|
rs764832926
|
- |
- |
|
rs767061831
|
Likely pathogenic |
D-2-hydroxyglutaric aciduria 2 [MONDO:MONDO:0013345,MedGen:C3150909,OMIM:613657,Orphanet:79315] |
|
rs768176085
|
- |
- |
|
rs770028533
|
- |
- |
|
rs770807520
|
- |
- |
|
rs776400068
|
- |
- |
|
rs776448754
|
- |
- |
|
rs781739244
|
- |
- |
|
rs781834702
|
- |
- |
|
rs781837455
|
- |
- |
|
rs782010539
|
- |
- |
|
rs782308462
|
LP/P |
Developmental and epileptic encephalopathy 51 (DEE51) [MIM:617339] |
|
rs782487022
|
- |
- |
|
rs786202403
|
Pathogenic/Likely pathogenic |
Hereditary cancer-predisposing syndrome|Pheochromocytoma [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0002666,MONDO:MONDO:0008233,MedGen:C0031511,OMIM:171300,Orphanet:29072]; Cowden syndrome 3 [MONDO:MONDO:0014045,MedGen:CN166604,Orphanet:201]; Carney-Stratakis syndrome [MONDO:MONDO:0011740,MedGen:C1847319,OMIM:606864,Orphanet:97286]; Paragangliomas with sensorineural hearing loss [MedGen:C1868633] |
|
rs786205145
|
Likely pathogenic |
Carney triad [MONDO:MONDO:0011424,MedGen:C1858592,OMIM:604287,Orphanet:139411] |
|
rs80338847
|
Pathogenic |
Paragangliomas 1|Hereditary pheochromocytoma-paraganglioma|not provided [MONDO:MONDO:0008192,MedGen:C3494181,OMIM:168000,Orphanet:29072|MONDO:MONDO:0017366,MedGen:C1708353,Orphanet:29072|MedGen:CN517202] |
|
rs80338847
|
Likely pathogenic |
Paragangliomas with sensorineural hearing loss [MedGen:C1868633]; Carney-Stratakis syndrome [MONDO:MONDO:0011740,MedGen:C1847319,OMIM:606864,Orphanet:97286]; Cowden syndrome 3 [MONDO:MONDO:0014045,MedGen:CN166604,Orphanet:201]; Pheochromocytoma [Human Phenotype Ontology:HP:0002666,MONDO:MONDO:0008233,MedGen:C0031511,OMIM:171300,Orphanet:29072] |
|
rs863224149
|
Pathogenic |
not provided|Pyruvate dehydrogenase E1-alpha deficiency [MedGen:C3661900|MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs863224150
|
Pathogenic |
not provided|Pyruvate dehydrogenase E1-alpha deficiency|Pyruvate dehydrogenase complex deficiency [MedGen:C3661900|MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243|MONDO:MONDO:0019169,MedGen:C0034345,OMIM:PS312170,Orphanet:765,Orphanet:79243] |
|
rs905092947
|
- |
- |
hsa00030
|
Pentose phosphate pathway
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Fructose-biphosphatase deficiency [MONDO:MONDO:0009251,MedGen:C0016756,OMIM:229700,Orphanet:348] |
|
-
|
Likely pathogenic |
Glycogen storage disease, type VII [MONDO:MONDO:0009295,MedGen:C0017926,OMIM:232800,Orphanet:371] |
|
-
|
LP/P |
Anemia, non-spherocytic hemolytic, due to G6PD deficiency (NSHA) [MIM:300908] |
|
-
|
Likely pathogenic |
Anemia, nonspherocytic hemolytic, due to G6PD deficiency [MONDO:MONDO:0010480,MedGen:C2720289,OMIM:300908,Orphanet:466026] |
|
-
|
Likely pathogenic |
Primary hyperoxaluria type 3 [MONDO:MONDO:0013327,MedGen:C3150878,OMIM:613616,Orphanet:416,Orphanet:93600] |
|
.
|
- |
- |
|
rs1050829
|
LB/B |
- |
|
rs121909534
|
Pathogenic |
HNSHA due to aldolase A deficiency [MONDO:MONDO:0012747,MedGen:C0272066,OMIM:611881,Orphanet:57] |
|
rs121918189
|
- |
- |
|
rs121918189
|
Pathogenic |
Fructose-biphosphatase deficiency [MONDO:MONDO:0009251,MedGen:C0016756,OMIM:229700,Orphanet:348] |
|
rs121918190
|
Pathogenic |
Fructose-biphosphatase deficiency [MONDO:MONDO:0009251,MedGen:C0016756,OMIM:229700,Orphanet:348] |
|
rs1280636156
|
- |
- |
|
rs1362222659
|
- |
- |
|
rs1378312777
|
- |
- |
|
rs137852316
|
LP/P |
Anemia, non-spherocytic hemolytic, due to G6PD deficiency (NSHA) [MIM:300908] |
|
rs137852325
|
LP/P |
Anemia, non-spherocytic hemolytic, due to G6PD deficiency (NSHA) [MIM:300908] |
|
rs137852329
|
LP/P |
Anemia, non-spherocytic hemolytic, due to G6PD deficiency (NSHA) [MIM:300908] |
|
rs137852341
|
LB/B |
- |
|
rs137852349
|
LP/P |
Anemia, non-spherocytic hemolytic, due to G6PD deficiency (NSHA) [MIM:300908] |
|
rs137852543
|
LP/P |
Phosphoribosylpyrophosphate synthetase superactivity (PRPS1 superactivity) [MIM:300661] |
|
rs137852545
|
LP/P |
Phosphoribosylpyrophosphate synthetase superactivity (PRPS1 superactivity) [MIM:300661] |
|
rs137853582
|
- |
- |
|
rs138207257
|
LP/P |
Hyperoxaluria primary 3 (HP3) [MIM:613616] |
|
rs138893744
|
Pathogenic |
Glycogen storage disease, type VII [MONDO:MONDO:0009295,MedGen:C0017926,OMIM:232800,Orphanet:371] |
|
rs143485300
|
- |
- |
|
rs1556381145
|
- |
- |
|
rs1557229416
|
- |
- |
|
rs1557229683
|
LP/P |
Anemia, non-spherocytic hemolytic, due to G6PD deficiency (NSHA) [MIM:300908] |
|
rs1557229736
|
Pathogenic/Likely pathogenic |
Inborn genetic diseases|Anemia, nonspherocytic hemolytic, due to G6PD deficiency [MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0010480,MedGen:C2720289,OMIM:300908,Orphanet:466026] |
|
rs1557230580
|
- |
- |
|
rs1831150965
|
Likely pathogenic |
Hereditary fructosuria [Human Phenotype Ontology:HP:0005973,MONDO:MONDO:0009249,MedGen:C0016751,OMIM:229600,Orphanet:469] |
|
rs184658792
|
- |
- |
|
rs189919790
|
- |
- |
|
rs200529020
|
Likely pathogenic |
Primary hyperoxaluria type 3 [MONDO:MONDO:0013327,MedGen:C3150878,OMIM:613616,Orphanet:416,Orphanet:93600] |
|
rs200544560
|
- |
- |
|
rs201215269
|
- |
- |
|
rs202231318
|
- |
- |
|
rs2118343224
|
Pathogenic |
Hereditary fructosuria [Human Phenotype Ontology:HP:0005973,MONDO:MONDO:0009249,MedGen:C0016751,OMIM:229600,Orphanet:469] |
|
rs2135856711
|
Pathogenic |
Glycogen storage disease, type VII [MONDO:MONDO:0009295,MedGen:C0017926,OMIM:232800,Orphanet:371] |
|
rs2147682409
|
Likely pathogenic |
Charcot-Marie-Tooth Neuropathy X|Charcot-Marie-Tooth disease X-linked recessive 5|not provided [MedGen:CN118851|MONDO:MONDO:0010699,MedGen:C1839566,OMIM:311070,Orphanet:99014|MedGen:C3661900] |
|
rs2148328852
|
Pathogenic/Likely pathogenic |
not provided|Anemia, nonspherocytic hemolytic, due to G6PD deficiency [MedGen:C3661900|MONDO:MONDO:0010480,MedGen:C2720289,OMIM:300908,Orphanet:466026] |
|
rs2148328873
|
Likely pathogenic |
Anemia, nonspherocytic hemolytic, due to G6PD deficiency [MONDO:MONDO:0010480,MedGen:C2720289,OMIM:300908,Orphanet:466026] |
|
rs2151019295
|
Pathogenic/Likely pathogenic |
HNSHA due to aldolase A deficiency [MONDO:MONDO:0012747,MedGen:C0272066,OMIM:611881,Orphanet:57] |
|
rs374714195
|
- |
- |
|
rs376093116
|
- |
- |
|
rs376690171
|
- |
- |
|
rs387906468
|
Pathogenic/Likely pathogenic |
G6PD PUERTO LIMON|Anemia, nonspherocytic hemolytic, due to G6PD deficiency|not provided [|MONDO:MONDO:0010480,MedGen:C2720289,OMIM:300908,Orphanet:466026|MedGen:C3661900] |
|
rs541509845
|
- |
- |
|
rs555935217
|
- |
- |
|
rs566453434
|
Pathogenic/Likely pathogenic |
not provided|Fructose-biphosphatase deficiency [MedGen:C3661900|MONDO:MONDO:0009251,MedGen:C0016756,OMIM:229700,Orphanet:348] |
|
rs746419489
|
Pathogenic |
Primary hyperoxaluria type 3|not provided [MONDO:MONDO:0013327,MedGen:C3150878,OMIM:613616,Orphanet:416,Orphanet:93600|MedGen:C3661900] |
|
rs748408705
|
- |
- |
|
rs749994897
|
- |
- |
|
rs750026492
|
Pathogenic/Likely pathogenic |
Hereditary fructosuria [Human Phenotype Ontology:HP:0005973,MONDO:MONDO:0009249,MedGen:C0016751,OMIM:229600,Orphanet:469] |
|
rs752807581
|
- |
- |
|
rs754049561
|
- |
- |
|
rs754160997
|
- |
- |
|
rs756489804
|
Pathogenic |
Primary hyperoxaluria type 3 [MONDO:MONDO:0013327,MedGen:C3150878,OMIM:613616,Orphanet:416,Orphanet:93600] |
|
rs756704521
|
- |
- |
|
rs757746489
|
- |
- |
|
rs758609113
|
Pathogenic/Likely pathogenic |
not provided|Fructose-biphosphatase deficiency [MedGen:CN517202|MONDO:MONDO:0009251,MedGen:C0016756,OMIM:229700,Orphanet:348] |
|
rs759725155
|
- |
- |
|
rs760379773
|
- |
- |
|
rs762200045
|
- |
- |
|
rs764224799
|
- |
- |
|
rs76645461
|
LP/P |
Anemia, non-spherocytic hemolytic, due to G6PD deficiency (NSHA) [MIM:300908] |
|
rs76645461
|
Pathogenic/Likely pathogenic |
G6PD AURES|not provided|Anemia, nonspherocytic hemolytic, due to G6PD deficiency|G6PD deficiency|Anemia, nonspherocytic hemolytic, due to G6PD deficiency [|MedGen:C3661900|MONDO:MONDO:0010480,MedGen:C2720289,OMIM:300908,Orphanet:466026|MONDO:MONDO:0005775,MedGen:C2939465|MONDO:MONDO:0010480,MedGen:C2720289,OMIM:300908,Orphanet:466026]; Malaria, susceptibility to|Malaria, susceptibility to [MONDO:MONDO:0021024,MedGen:C1970028,OMIM:611162,Orphanet:673|MONDO:MONDO:0021024,MedGen:C1970028,OMIM:611162,Orphanet:673] |
|
rs767405535
|
Pathogenic |
Primary hyperoxaluria type 3|not provided [MONDO:MONDO:0013327,MedGen:C3150878,OMIM:613616,Orphanet:416,Orphanet:93600|MedGen:C3661900] |
|
rs769512330
|
- |
- |
|
rs772424772
|
- |
- |
|
rs780442649
|
- |
- |
|
rs780715532
|
- |
- |
|
rs781110394
|
- |
- |
|
rs78160297
|
- |
- |
|
rs782090947
|
Pathogenic/Likely pathogenic |
not provided|Anemia, nonspherocytic hemolytic, due to G6PD deficiency [MedGen:C3661900|MONDO:MONDO:0010480,MedGen:C2720289,OMIM:300908,Orphanet:466026] |
|
rs782314561
|
- |
- |
|
rs782412869
|
- |
- |
|
rs782436684
|
- |
- |
|
rs782453942
|
- |
- |
|
rs782483326
|
- |
- |
|
rs782549710
|
- |
- |
|
rs78365220
|
LP/P |
Anemia, non-spherocytic hemolytic, due to G6PD deficiency (NSHA) [MIM:300908] |
|
rs78478128
|
LP/P |
Anemia, non-spherocytic hemolytic, due to G6PD deficiency (NSHA) [MIM:300908] |
|
rs78478128
|
Pathogenic |
G6PD ORISSA|Anemia, nonspherocytic hemolytic, due to G6PD deficiency|not provided|G6PD deficiency|Malaria, susceptibility to [|MONDO:MONDO:0010480,MedGen:C2720289,OMIM:300908,Orphanet:466026|MedGen:C3661900|MONDO:MONDO:0005775,MedGen:C2939465|MONDO:MONDO:0021024,MedGen:C1970028,OMIM:611162,Orphanet:673] |
|
rs796052088
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria type 3|not provided [MONDO:MONDO:0013327,MedGen:C3150878,OMIM:613616,Orphanet:416,Orphanet:93600|MedGen:C3661900] |
|
rs80338675
|
LP/P |
ARTS syndrome (ARTS) [MIM:301835] |
|
rs80338731
|
LP/P |
Charcot-Marie-Tooth disease, X-linked recessive, 5 (CMTX5) [MIM:311070] |
|
rs866904446
|
Pathogenic/Likely pathogenic |
Glycogen storage disease, type VII [MONDO:MONDO:0009295,MedGen:C0017926,OMIM:232800,Orphanet:371] |
|
rs869025593
|
Pathogenic |
Hearing loss, X-linked 1|Arts syndrome [MONDO:MONDO:0010577,MedGen:C1844677,OMIM:304500,Orphanet:90625|MONDO:MONDO:0010533,MedGen:C0796028,OMIM:301835,Orphanet:1187] |
hsa00040
|
Pentose and glucuronate interconversions
|
dbSNP |
Type |
Disease name |
|
-
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
-
|
LP/P |
Developmental and epileptic encephalopathy 84 (DEE84) [MIM:618792] |
|
.
|
- |
- |
|
rs11666105
|
- |
- |
|
rs1170817007
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs121912707
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Seizure|Pyridoxine-dependent epilepsy caused by ALDH7A1 mutant [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|Human Phenotype Ontology:HP:0001250,Human Phenotype Ontology:HP:0001275,Human Phenotype Ontology:HP:0001303,Human Phenotype Ontology:HP:0002125,Human Phenotype Ontology:HP:0002182,Human Phenotype Ontology:HP:0002279,Human Phenotype Ontology:HP:0002306,Human Phenotype Ontology:HP:0002348,Human Phenotype Ontology:HP:0002391,Human Phenotype Ontology:HP:0002417,Human Phenotype Ontology:HP:0002430,Human Phenotype Ontology:HP:0002431,Human Phenotype Ontology:HP:0002432,Human Phenotype Ontology:HP:0002434,Human Phenotype Ontology:HP:0002437,Human Phenotype Ontology:HP:0002466,Human Phenotype Ontology:HP:0002479,Human Phenotype Ontology:HP:0002794,Human Phenotype Ontology:HP:0006997,Human Phenotype Ontology:HP:0010520,MedGen:C0036572|MONDO:MONDO:0020741,MedGen:CN293409] |
|
rs121912711
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs1226928039
|
- |
- |
|
rs1239594775
|
- |
- |
|
rs1267443415
|
Pathogenic |
Neuronopathy, distal hereditary motor, autosomal recessive 8 [MONDO:MONDO:0030055,MedGen:C5394466,OMIM:618912] |
|
rs1294400653
|
- |
- |
|
rs1311982393
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1322196849
|
- |
- |
|
rs13222
|
LP/P |
46,XY sex reversal 8 (SRXY8) [MIM:614279] |
|
rs1348837644
|
- |
- |
|
rs138675307
|
- |
- |
|
rs138887023
|
- |
- |
|
rs140112768
|
- |
- |
|
rs1438253227
|
- |
- |
|
rs146556418
|
- |
- |
|
rs149295644
|
- |
- |
|
rs150526754
|
- |
- |
|
rs1564317029
|
- |
- |
|
rs1568021957
|
- |
- |
|
rs1750309299
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1750388096
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs200000745
|
- |
- |
|
rs200908381
|
- |
- |
|
rs201321507
|
- |
- |
|
rs201835306
|
- |
- |
|
rs201894374
|
US |
Developmental and epileptic encephalopathy 84 (DEE84) [MIM:618792] |
|
rs201948406
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Inborn genetic diseases [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs2234622
|
LB/B |
- |
|
rs2234625
|
- |
- |
|
rs2270941
|
- |
- |
|
rs2458502
|
- |
- |
|
rs2959896
|
- |
- |
|
rs369608407
|
Pathogenic/Likely pathogenic |
Epileptic encephalopathy|Developmental and epileptic encephalopathy, 84 [Human Phenotype Ontology:HP:0200134,MedGen:C0543888|MONDO:MONDO:0032918,MedGen:C5394081,OMIM:618792] |
|
rs370245703
|
- |
- |
|
rs370312954
|
- |
- |
|
rs372660425
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs372696285
|
- |
- |
|
rs372885680
|
- |
- |
|
rs373645316
|
- |
- |
|
rs5054
|
LB/B |
- |
|
rs5056
|
LB/B |
- |
|
rs556067053
|
- |
- |
|
rs556400964
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs559792550
|
- |
- |
|
rs573040804
|
- |
- |
|
rs747847507
|
- |
- |
|
rs748809586
|
- |
- |
|
rs749485571
|
- |
- |
|
rs753288504
|
- |
- |
|
rs753830206
|
- |
- |
|
rs755264844
|
- |
- |
|
rs756117252
|
- |
- |
|
rs756827825
|
- |
- |
|
rs758625590
|
- |
- |
|
rs761295869
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs762922297
|
- |
- |
|
rs765892707
|
- |
- |
|
rs771427619
|
- |
- |
|
rs772424772
|
- |
- |
|
rs772620790
|
- |
- |
|
rs773503933
|
- |
- |
|
rs773593573
|
- |
- |
|
rs773802985
|
- |
- |
|
rs775137066
|
- |
- |
|
rs776421832
|
- |
- |
|
rs781200594
|
- |
- |
|
rs782266548
|
- |
- |
|
rs782328441
|
- |
- |
|
rs79233786
|
- |
- |
|
rs796052271
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs864622558
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs865845501
|
- |
- |
|
rs984091958
|
- |
- |
hsa00051
|
Fructose and mannose metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
-
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
-
|
Likely pathogenic |
Fructose-biphosphatase deficiency [MONDO:MONDO:0009251,MedGen:C0016756,OMIM:229700,Orphanet:348] |
|
-
|
Likely pathogenic |
Glycogen storage disease, type VII [MONDO:MONDO:0009295,MedGen:C0017926,OMIM:232800,Orphanet:371] |
|
-
|
LP/P |
Diabetes mellitus, permanent neonatal, 1 (PNDM1) [MIM:606176] |
|
-
|
Likely pathogenic |
Maturity onset diabetes mellitus in young [Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
-
|
Likely pathogenic |
Neuronopathy, distal hereditary motor, autosomal recessive 8 [MONDO:MONDO:0030055,MedGen:C5394466,OMIM:618912] |
|
.
|
- |
- |
|
rs104893643
|
LP/P |
Fructosuria (FRUCT) [MIM:229800] |
|
rs104893644
|
LP/P |
Fructosuria (FRUCT) [MIM:229800] |
|
rs1063554
|
- |
- |
|
rs1064794848
|
LP/P |
Neurodevelopmental disorder with visual defects and brain anomalies (NEDVIBA) [MIM:618547] |
|
rs1064794848
|
Pathogenic/Likely pathogenic |
not provided|Neurodevelopmental disorder with visual defects and brain anomalies|Retinitis pigmentosa|Inborn genetic diseases|Hemolytic anemia due to hexokinase deficiency|Retinitis pigmentosa 79|Autism spectrum disorder [MedGen:C3661900|MONDO:MONDO:0032807,MedGen:C5231404,OMIM:618547|Human Phenotype Ontology:HP:0000547,MONDO:MONDO:0019200,MeSH:D012174,MedGen:C0035334,OMIM:268000,OMIM:PS268000,Orphanet:791|MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0009340,MedGen:C3150343,OMIM:235700,Orphanet:90031|MONDO:MONDO:0044320,MedGen:C4479526,OMIM:617460|MONDO:MONDO:0005258,MeSH:D000067877,MedGen:C1510586,Orphanet:106] |
|
rs1064795154
|
LP/P |
Neurodevelopmental disorder with visual defects and brain anomalies (NEDVIBA) [MIM:618547] |
|
rs11553107
|
LB/B |
- |
|
rs121909533
|
LP/P |
Glycogen storage disease 12 (GSD12) [MIM:611881] |
|
rs121909534
|
LP/P |
Glycogen storage disease 12 (GSD12) [MIM:611881] |
|
rs121918189
|
- |
- |
|
rs121918189
|
Pathogenic |
Fructose-biphosphatase deficiency [MONDO:MONDO:0009251,MedGen:C0016756,OMIM:229700,Orphanet:348] |
|
rs121918190
|
Pathogenic |
Fructose-biphosphatase deficiency [MONDO:MONDO:0009251,MedGen:C0016756,OMIM:229700,Orphanet:348] |
|
rs1267443415
|
Pathogenic |
Neuronopathy, distal hereditary motor, autosomal recessive 8 [MONDO:MONDO:0030055,MedGen:C5394466,OMIM:618912] |
|
rs1280636156
|
- |
- |
|
rs1332966015
|
Pathogenic |
not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1337350024
|
- |
- |
|
rs1375656631
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1379500249
|
- |
- |
|
rs138367050
|
- |
- |
|
rs138893744
|
Pathogenic |
Glycogen storage disease, type VII [MONDO:MONDO:0009295,MedGen:C0017926,OMIM:232800,Orphanet:371] |
|
rs139620518
|
- |
- |
|
rs139948811
|
- |
- |
|
rs139998516
|
- |
- |
|
rs140641547
|
- |
- |
|
rs141315355
|
- |
- |
|
rs143026820
|
- |
- |
|
rs143485300
|
- |
- |
|
rs1438253227
|
- |
- |
|
rs1441649062
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs145813597
|
US |
Sorbitol dehydrogenase deficiency with peripheral neuropathy (SORDD) [MIM:618912] |
|
rs1470521850
|
Pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs148239543
|
- |
- |
|
rs148311934
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs148311934
|
Pathogenic |
Maturity-onset diabetes of the young type 2|not provided|Maturity onset diabetes mellitus in young|Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552]; Type 2 diabetes mellitus [Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853]; Hyperinsulinism due to glucokinase deficiency [MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299]; Permanent neonatal diabetes mellitus 1|Monogenic diabetes [MONDO:MONDO:0100165,MedGen:C5393570,OMIM:606176|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs148627840
|
- |
- |
|
rs1490487177
|
- |
- |
|
rs149975952
|
US |
Sorbitol dehydrogenase deficiency with peripheral neuropathy (SORDD) [MIM:618912] |
|
rs150279875
|
- |
- |
|
rs1554335132
|
Pathogenic |
not specified|Maturity onset diabetes mellitus in young|Monogenic diabetes [MedGen:CN169374|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs1554335135
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1554335135
|
Pathogenic/Likely pathogenic |
not provided|Maturity onset diabetes mellitus in young [MedGen:CN517202|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1554335761
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1562715426
|
Pathogenic |
not provided|Maturity onset diabetes mellitus in young [MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1564557037
|
LP/P |
Neurodevelopmental disorder with visual defects and brain anomalies (NEDVIBA) [MIM:618547] |
|
rs1564557037
|
Likely pathogenic |
Neurodevelopmental disorder with visual defects and brain anomalies|Neurodevelopmental abnormality|Charcot-Marie-Tooth disease type 4G [MONDO:MONDO:0032807,MedGen:C5231404,OMIM:618547|Human Phenotype Ontology:HP:0012759,MedGen:C4022737|MONDO:MONDO:0011534,MedGen:C1854449,OMIM:605285,Orphanet:99953] |
|
rs181651478
|
- |
- |
|
rs1831150965
|
Likely pathogenic |
Hereditary fructosuria [Human Phenotype Ontology:HP:0005973,MONDO:MONDO:0009249,MedGen:C0016751,OMIM:229600,Orphanet:469] |
|
rs190292776
|
- |
- |
|
rs193922297
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs193922303
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs193922319
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2|Maturity onset diabetes mellitus in young|Monogenic diabetes [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs193922327
|
Pathogenic/Likely pathogenic |
Maturity-onset diabetes of the young type 2|not provided [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900] |
|
rs199878471
|
- |
- |
|
rs200544560
|
- |
- |
|
rs201037118
|
- |
- |
|
rs201998835
|
- |
- |
|
rs2096278847
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs2096280050
|
US |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs2118343224
|
Pathogenic |
Hereditary fructosuria [Human Phenotype Ontology:HP:0005973,MONDO:MONDO:0009249,MedGen:C0016751,OMIM:229600,Orphanet:469] |
|
rs2128820597
|
Pathogenic/Likely pathogenic |
Maturity-onset diabetes of the young type 2|Monogenic diabetes|not provided [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|MedGen:C3661900] |
|
rs2128821509
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs2135856711
|
Pathogenic |
Glycogen storage disease, type VII [MONDO:MONDO:0009295,MedGen:C0017926,OMIM:232800,Orphanet:371] |
|
rs2151019295
|
Pathogenic/Likely pathogenic |
HNSHA due to aldolase A deficiency [MONDO:MONDO:0012747,MedGen:C0272066,OMIM:611881,Orphanet:57] |
|
rs2959896
|
- |
- |
|
rs35117690
|
- |
- |
|
rs367815523
|
- |
- |
|
rs376093116
|
- |
- |
|
rs376690171
|
- |
- |
|
rs397518462
|
LP/P |
Alacrima, achalasia, and impaired intellectual development syndrome (AAMR) [MIM:615510] |
|
rs398122379
|
LP/P |
Hexokinase deficiency (HK deficiency) [MIM:235700] |
|
rs541509845
|
- |
- |
|
rs554595347
|
- |
- |
|
rs555935217
|
- |
- |
|
rs562642551
|
- |
- |
|
rs566453434
|
Pathogenic/Likely pathogenic |
not provided|Fructose-biphosphatase deficiency [MedGen:C3661900|MONDO:MONDO:0009251,MedGen:C0016756,OMIM:229700,Orphanet:348] |
|
rs587780346
|
Pathogenic/Likely pathogenic |
Gestational diabetes|not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [Human Phenotype Ontology:HP:0009800,MONDO:MONDO:0005406,MedGen:C0085207|MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs747367976
|
- |
- |
|
rs747847507
|
- |
- |
|
rs749145675
|
- |
- |
|
rs750026492
|
Pathogenic/Likely pathogenic |
Hereditary fructosuria [Human Phenotype Ontology:HP:0005973,MONDO:MONDO:0009249,MedGen:C0016751,OMIM:229600,Orphanet:469] |
|
rs750714549
|
- |
- |
|
rs751012777
|
- |
- |
|
rs752807581
|
- |
- |
|
rs754185312
|
- |
- |
|
rs754994587
|
- |
- |
|
rs755264844
|
- |
- |
|
rs755955022
|
- |
- |
|
rs756704521
|
- |
- |
|
rs757746489
|
- |
- |
|
rs758609113
|
Pathogenic/Likely pathogenic |
not provided|Fructose-biphosphatase deficiency [MedGen:CN517202|MONDO:MONDO:0009251,MedGen:C0016756,OMIM:229700,Orphanet:348] |
|
rs758816952
|
- |
- |
|
rs759725155
|
- |
- |
|
rs760068551
|
- |
- |
|
rs760379773
|
- |
- |
|
rs760807537
|
- |
- |
|
rs761714818
|
LP/P |
Muscular dystrophy-dystroglycanopathy limb-girdle C14 (MDDGC14) [MIM:615352] |
|
rs762200045
|
- |
- |
|
rs762369271
|
- |
- |
|
rs769268803
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs769268803
|
Pathogenic |
not provided|Permanent neonatal diabetes mellitus [MedGen:C3661900|MONDO:MONDO:0100164,MedGen:C1833104,OMIM:PS606176,Orphanet:99885]; Hyperinsulinism due to glucokinase deficiency [MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299]; Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552]; Type 2 diabetes mellitus|Maturity-onset diabetes of the young type 2 [Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs769512330
|
- |
- |
|
rs771553926
|
- |
- |
|
rs772754004
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs775137066
|
- |
- |
|
rs775924004
|
- |
- |
|
rs779828856
|
- |
- |
|
rs780442649
|
- |
- |
|
rs780715532
|
- |
- |
|
rs781078287
|
- |
- |
|
rs781110394
|
- |
- |
|
rs794727839
|
Likely pathogenic |
not provided|Maturity-onset diabetes of the young type 2|Maturity onset diabetes mellitus in young|Monogenic diabetes|not specified [MedGen:C3661900|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|MedGen:CN169374] |
|
rs80356655
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs80356655
|
Pathogenic |
Maturity-onset diabetes of the young type 2|not provided|Permanent neonatal diabetes mellitus 1|Maturity onset diabetes mellitus in young|Type 2 diabetes mellitus|Hyperinsulinism due to glucokinase deficiency|Monogenic diabetes [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900|MONDO:MONDO:0100165,MedGen:C5393570,OMIM:606176|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853|MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs866904446
|
Pathogenic/Likely pathogenic |
Glycogen storage disease, type VII [MONDO:MONDO:0009295,MedGen:C0017926,OMIM:232800,Orphanet:371] |
|
rs943355847
|
- |
- |
|
rs992781636
|
- |
- |
hsa00052
|
Galactose metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
-
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
-
|
LP/P |
Galactosemia 2 (GALAC2) [MIM:230200] |
|
-
|
Pathogenic |
Deficiency of galactokinase [MONDO:MONDO:0009255,MedGen:C0268155,OMIM:230200,Orphanet:352,Orphanet:79237] |
|
-
|
Pathogenic |
not provided|Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase [MedGen:C3661900|MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239] |
|
-
|
LP/P |
GM1-gangliosidosis 1 (GM1G1) [MIM:230500] |
|
-
|
Pathogenic |
Infantile GM1 gangliosidosis|Mucopolysaccharidosis, MPS-IV-B [MONDO:MONDO:0009260,MedGen:C0268271,OMIM:230500,Orphanet:354,Orphanet:79255|MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582]; GM1 gangliosidosis [MONDO:MONDO:0018149,MedGen:C0085131,Orphanet:354] |
|
-
|
LP/P |
GM1-gangliosidosis 2 (GM1G2) [MIM:230600] |
|
-
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
-
|
Likely pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
-
|
Likely pathogenic |
Glycogen storage disease, type VII [MONDO:MONDO:0009295,MedGen:C0017926,OMIM:232800,Orphanet:371] |
|
-
|
Pathogenic |
GM1 gangliosidosis [MONDO:MONDO:0018149,MedGen:C0085131,Orphanet:354]; Mucopolysaccharidosis, MPS-IV-B [MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582] |
|
-
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
-
|
Pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
-
|
LP/P |
Diabetes mellitus, permanent neonatal, 1 (PNDM1) [MIM:606176] |
|
-
|
Likely pathogenic |
Maturity onset diabetes mellitus in young [Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
-
|
LP/P |
Congenital disorder of glycosylation 1T (CDG1T) [MIM:614921] |
|
-
|
Pathogenic |
Combined low LDL and fibrinogen [MONDO:MONDO:0957260,MedGen:C5830484,OMIM:620364] |
|
-
|
Likely pathogenic |
Galactosemia [Human Phenotype Ontology:HP:0004919,MONDO:MONDO:0018116,MedGen:C0016952,OMIM:PS230400,Orphanet:352] |
|
.
|
- |
- |
|
rs1011631903
|
Pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs104894009
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs104894577
|
Pathogenic |
Deficiency of galactokinase [MONDO:MONDO:0009255,MedGen:C0268155,OMIM:230200,Orphanet:352,Orphanet:79237] |
|
rs104894827
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs104894832
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs104894835
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs104894840
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs104894841
|
Pathogenic |
Fabry disease|not provided [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324|MedGen:C3661900] |
|
rs104894844
|
Pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs104894845
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs1057516600
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs1057521047
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs1064794848
|
LP/P |
Neurodevelopmental disorder with visual defects and brain anomalies (NEDVIBA) [MIM:618547] |
|
rs1064794848
|
Pathogenic/Likely pathogenic |
not provided|Neurodevelopmental disorder with visual defects and brain anomalies|Retinitis pigmentosa|Inborn genetic diseases|Hemolytic anemia due to hexokinase deficiency|Retinitis pigmentosa 79|Autism spectrum disorder [MedGen:C3661900|MONDO:MONDO:0032807,MedGen:C5231404,OMIM:618547|Human Phenotype Ontology:HP:0000547,MONDO:MONDO:0019200,MeSH:D012174,MedGen:C0035334,OMIM:268000,OMIM:PS268000,Orphanet:791|MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0009340,MedGen:C3150343,OMIM:235700,Orphanet:90031|MONDO:MONDO:0044320,MedGen:C4479526,OMIM:617460|MONDO:MONDO:0005258,MeSH:D000067877,MedGen:C1510586,Orphanet:106] |
|
rs1064795154
|
LP/P |
Neurodevelopmental disorder with visual defects and brain anomalies (NEDVIBA) [MIM:618547] |
|
rs111033648
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033652
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033669
|
- |
- |
|
rs111033669
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033715
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033715
|
Pathogenic/Likely pathogenic |
Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase|not provided|Galactosemia [MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239|MedGen:C3661900|Human Phenotype Ontology:HP:0004919,MONDO:MONDO:0018116,MedGen:C0016952,OMIM:PS230400,Orphanet:352] |
|
rs111033720
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033725
|
Pathogenic |
Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase|not provided [MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239|MedGen:C3661900] |
|
rs111033800
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033800
|
Pathogenic/Likely pathogenic |
Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase|not provided|Galactosemia [MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239|MedGen:C3661900|Human Phenotype Ontology:HP:0004919,MONDO:MONDO:0018116,MedGen:C0016952,OMIM:PS230400,Orphanet:352] |
|
rs111033802
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033802
|
Pathogenic/Likely pathogenic |
Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase|Galactosemia [MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239|Human Phenotype Ontology:HP:0004919,MONDO:MONDO:0018116,MedGen:C0016952,OMIM:PS230400,Orphanet:352] |
|
rs111033806
|
Pathogenic |
Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase [MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239] |
|
rs111033808
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033808
|
Pathogenic/Likely pathogenic |
Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase|not provided|Galactosemia [MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239|MedGen:C3661900|Human Phenotype Ontology:HP:0004919,MONDO:MONDO:0018116,MedGen:C0016952,OMIM:PS230400,Orphanet:352] |
|
rs111033809
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033810
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033811
|
Pathogenic/Likely pathogenic |
Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase|not provided|Galactosemia [MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239|MedGen:C3661900|Human Phenotype Ontology:HP:0004919,MONDO:MONDO:0018116,MedGen:C0016952,OMIM:PS230400,Orphanet:352] |
|
rs111033812
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033814
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033815
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033828
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033832
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs1131691416
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1131691416
|
Pathogenic/Likely pathogenic |
not provided|Maturity-onset diabetes of the young type 2|Type 2 diabetes mellitus [MedGen:C3661900|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853]; Hyperinsulinism due to glucokinase deficiency [MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299]; Permanent neonatal diabetes mellitus 1 [MONDO:MONDO:0100165,MedGen:C5393570,OMIM:606176]; Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs113173389
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs115413295
|
- |
- |
|
rs115413295
|
Pathogenic |
Galactosemia 4|not provided [MONDO:MONDO:0030105,MedGen:C5394377,OMIM:618881,Orphanet:570422|MedGen:C3661900] |
|
rs1183869568
|
Pathogenic |
not provided|Fabry disease [MedGen:C3661900|Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs121907937
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs121908047
|
LP/P |
Galactosemia 3 (GALAC3) [MIM:230350] |
|
rs1232001857
|
Likely pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs1243515778
|
Pathogenic/Likely pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs1280636156
|
- |
- |
|
rs1286804191
|
LP/P |
Diabetes mellitus, permanent neonatal, 1 (PNDM1) [MIM:606176] |
|
rs1301021797
|
LP/P |
Congenital disorder of glycosylation 1T (CDG1T) [MIM:614921] |
|
rs1320810473
|
LP/P |
Congenital disorder of glycosylation 1T (CDG1T) [MIM:614921] |
|
rs1332966015
|
Pathogenic |
not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1360415315
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1360415315
|
Pathogenic |
not provided|Maturity-onset diabetes of the young type 2|Hyperinsulinism due to glucokinase deficiency [MedGen:C3661900|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299]; Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552]; Permanent neonatal diabetes mellitus [MONDO:MONDO:0100164,MedGen:C1833104,OMIM:PS606176,Orphanet:99885]; Type 2 diabetes mellitus|Maturity onset diabetes mellitus in young|Monogenic diabetes [Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs1375656631
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1378338444
|
Pathogenic/Likely pathogenic |
GM1 gangliosidosis type 3 [MONDO:MONDO:0009262,MedGen:C0268273,OMIM:230650,Orphanet:79257]; Infantile GM1 gangliosidosis [MONDO:MONDO:0009260,MedGen:C0268271,OMIM:230500,Orphanet:354,Orphanet:79255]; GM1 gangliosidosis type 2|GM1 gangliosidosis [MONDO:MONDO:0009261,MedGen:C0268272,OMIM:230600,Orphanet:354,Orphanet:79256|MONDO:MONDO:0018149,MedGen:C0085131,Orphanet:354]; Mucopolysaccharidosis, MPS-IV-B [MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582] |
|
rs137853860
|
- |
- |
|
rs137853860
|
LP/P |
Galactosemia 3 (GALAC3) [MIM:230350] |
|
rs137853861
|
- |
- |
|
rs137853861
|
LP/P |
Galactosemia 3 (GALAC3) [MIM:230350] |
|
rs138893744
|
Pathogenic |
Glycogen storage disease, type VII [MONDO:MONDO:0009295,MedGen:C0017926,OMIM:232800,Orphanet:371] |
|
rs140826989
|
Pathogenic |
Glycogen storage disease, type II|not provided [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365|MedGen:C3661900] |
|
rs141315355
|
- |
- |
|
rs141533320
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs142441831
|
- |
- |
|
rs142481170
|
- |
- |
|
rs142752477
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs1432841878
|
Pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs143485300
|
- |
- |
|
rs1441649062
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs144723656
|
Pathogenic |
Maturity-onset diabetes of the young type 2|not provided [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:CN517202] |
|
rs144723656
|
Pathogenic/Likely pathogenic |
not provided|Maturity onset diabetes mellitus in young [MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1447365901
|
Pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs144993986
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase [MedGen:C3661900|MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239] |
|
rs1470521850
|
Pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs1476637197
|
Pathogenic |
Maturity-onset diabetes of the young type 2|Monogenic diabetes [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs148311934
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs148311934
|
Pathogenic |
Maturity-onset diabetes of the young type 2|not provided|Maturity onset diabetes mellitus in young|Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552]; Type 2 diabetes mellitus [Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853]; Hyperinsulinism due to glucokinase deficiency [MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299]; Permanent neonatal diabetes mellitus 1|Monogenic diabetes [MONDO:MONDO:0100165,MedGen:C5393570,OMIM:606176|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs1490487177
|
- |
- |
|
rs1553612220
|
LP/P |
Mucopolysaccharidosis 4B (MPS4B) [MIM:253010] |
|
rs1554334872
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2|Maturity onset diabetes mellitus in young [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1554334905
|
Likely pathogenic |
not specified|not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [MedGen:CN169374|MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1554335132
|
Pathogenic |
not specified|Maturity onset diabetes mellitus in young|Monogenic diabetes [MedGen:CN169374|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs1554335135
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1554335135
|
Pathogenic/Likely pathogenic |
not provided|Maturity onset diabetes mellitus in young [MedGen:CN517202|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1554335761
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1555748630
|
- |
- |
|
rs1555748926
|
LP/P |
Galactosemia 2 (GALAC2) [MIM:230200] |
|
rs1562711915
|
Pathogenic |
not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1562715426
|
Pathogenic |
not provided|Maturity onset diabetes mellitus in young [MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1562717053
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1562717053
|
Pathogenic |
not provided|Maturity-onset diabetes of the young type 2 [MedGen:C3661900|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552]; Permanent neonatal diabetes mellitus 1 [MONDO:MONDO:0100165,MedGen:C5393570,OMIM:606176]; Type 2 diabetes mellitus [Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853]; Hyperinsulinism due to glucokinase deficiency|Monogenic diabetes|Maturity onset diabetes mellitus in young [MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1564100957
|
Likely pathogenic |
not provided|Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase [MedGen:C3661900|MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239] |
|
rs1564557037
|
LP/P |
Neurodevelopmental disorder with visual defects and brain anomalies (NEDVIBA) [MIM:618547] |
|
rs1564557037
|
Likely pathogenic |
Neurodevelopmental disorder with visual defects and brain anomalies|Neurodevelopmental abnormality|Charcot-Marie-Tooth disease type 4G [MONDO:MONDO:0032807,MedGen:C5231404,OMIM:618547|Human Phenotype Ontology:HP:0012759,MedGen:C4022737|MONDO:MONDO:0011534,MedGen:C1854449,OMIM:605285,Orphanet:99953] |
|
rs1583591303
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1583599303
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1583599303
|
Pathogenic/Likely pathogenic/Likely risk allele |
not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1699002261
|
Likely pathogenic |
GM1 gangliosidosis type 3 [MONDO:MONDO:0009262,MedGen:C0268273,OMIM:230650,Orphanet:79257]; GM1 gangliosidosis type 2 [MONDO:MONDO:0009261,MedGen:C0268272,OMIM:230600,Orphanet:354,Orphanet:79256]; Infantile GM1 gangliosidosis [MONDO:MONDO:0009260,MedGen:C0268271,OMIM:230500,Orphanet:354,Orphanet:79255] |
|
rs1699791081
|
Likely pathogenic |
GM1 gangliosidosis [MONDO:MONDO:0018149,MedGen:C0085131,Orphanet:354]; Mucopolysaccharidosis, MPS-IV-B [MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582] |
|
rs1800299
|
LB/B |
- |
|
rs190285241
|
- |
- |
|
rs1928132914
|
Likely pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs1928137126
|
Likely pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs1928189534
|
Pathogenic |
Fabry disease|not provided [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324|MedGen:C3661900] |
|
rs1928195468
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs1928326804
|
Pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs1928406948
|
Likely pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs193922272
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs193922281
|
Pathogenic/Likely pathogenic |
Maturity-onset diabetes of the young type 2|not provided|Maturity onset diabetes mellitus in young [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs193922282
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs193922282
|
LP/P |
Diabetes mellitus, permanent neonatal, 1 (PNDM1) [MIM:606176] |
|
rs193922290
|
Likely pathogenic/Likely risk allele |
Maturity-onset diabetes of the young type 2|Maturity onset diabetes mellitus in young [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs193922297
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs193922311
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs193922319
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2|Maturity onset diabetes mellitus in young|Monogenic diabetes [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs193922327
|
Pathogenic/Likely pathogenic |
Maturity-onset diabetes of the young type 2|not provided [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900] |
|
rs200544560
|
- |
- |
|
rs2039041225
|
Pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs2039217093
|
Pathogenic/Likely pathogenic |
Glycogen storage disease, type II|not provided [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365|MedGen:C3661900] |
|
rs2061598873
|
Likely pathogenic |
Deficiency of galactokinase [MONDO:MONDO:0009255,MedGen:C0268155,OMIM:230200,Orphanet:352,Orphanet:79237] |
|
rs2096273902
|
Likely pathogenic |
not provided|Maturity onset diabetes mellitus in young|Monogenic diabetes [MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs2096280050
|
US |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs2096281827
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs2128820597
|
Pathogenic/Likely pathogenic |
Maturity-onset diabetes of the young type 2|Monogenic diabetes|not provided [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|MedGen:C3661900] |
|
rs2128821509
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs2132341560
|
Likely pathogenic |
Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase [MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239] |
|
rs2135856711
|
Pathogenic |
Glycogen storage disease, type VII [MONDO:MONDO:0009295,MedGen:C0017926,OMIM:232800,Orphanet:371] |
|
rs2143827215
|
Likely pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs2143857207
|
Pathogenic/Likely pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs2143871845
|
Pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs2147480697
|
Likely pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs28935487
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs28935491
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs28935492
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs28940868
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs367543259
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs368438393
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs370107958
|
Likely pathogenic |
not specified|Mucopolysaccharidosis, MPS-IV-B [MedGen:CN169374|MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582] |
|
rs371517491
|
- |
- |
|
rs371517491
|
Pathogenic/Likely pathogenic |
Deficiency of galactokinase [MONDO:MONDO:0009255,MedGen:C0268155,OMIM:230200,Orphanet:352,Orphanet:79237] |
|
rs373307393
|
Pathogenic |
not provided|Glycogen storage disease, type II [MedGen:C3661900|MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs375310352
|
- |
- |
|
rs375690568
|
LP/P |
Galactosemia 2 (GALAC2) [MIM:230200] |
|
rs376663785
|
LP/P |
GM1-gangliosidosis 3 (GM1G3) [MIM:230650] |
|
rs376663785
|
Pathogenic/Likely pathogenic |
not provided|Inborn genetic diseases|Mucopolysaccharidosis, MPS-IV-B [MedGen:C3661900|MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582]; GM1 gangliosidosis|GM1 gangliosidosis type 2 [MONDO:MONDO:0018149,MedGen:C0085131,Orphanet:354|MONDO:MONDO:0009261,MedGen:C0268272,OMIM:230600,Orphanet:354,Orphanet:79256]; Infantile GM1 gangliosidosis [MONDO:MONDO:0009260,MedGen:C0268271,OMIM:230500,Orphanet:354,Orphanet:79255]; Mucopolysaccharidosis, MPS-IV-B [MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582]; GM1 gangliosidosis type 3|Mucopolysaccharidosis, MPS-IV-B|GLB1-Related Disorders [MONDO:MONDO:0009262,MedGen:C0268273,OMIM:230650,Orphanet:79257|MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582|MedGen:CN169666] |
|
rs377544304
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs398122379
|
LP/P |
Hexokinase deficiency (HK deficiency) [MIM:235700] |
|
rs398123174
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs398123182
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase [MedGen:C3661900|MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239] |
|
rs398123221
|
Pathogenic |
not provided|Fabry disease [MedGen:C3661900|Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs5054
|
LB/B |
- |
|
rs5056
|
LB/B |
- |
|
rs533469192
|
- |
- |
|
rs549029029
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs551564683
|
LB/B |
- |
|
rs587780346
|
Pathogenic/Likely pathogenic |
Gestational diabetes|not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [Human Phenotype Ontology:HP:0009800,MONDO:MONDO:0005406,MedGen:C0085207|MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs72555362
|
LP/P |
Mucopolysaccharidosis 4B (MPS4B) [MIM:253010] |
|
rs72555364
|
LP/P |
Mucopolysaccharidosis 4B (MPS4B) [MIM:253010] |
|
rs727503942
|
- |
- |
|
rs727505292
|
US |
Fabry disease (FD) [MIM:301500] |
|
rs730880451
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs746913146
|
Pathogenic |
not provided|Maturity onset diabetes mellitus in young|Monogenic diabetes [MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs748225017
|
- |
- |
|
rs75391579
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs754185312
|
- |
- |
|
rs754967473
|
- |
- |
|
rs754967473
|
LP/P |
Galactosemia 2 (GALAC2) [MIM:230200] |
|
rs754994587
|
- |
- |
|
rs757111744
|
- |
- |
|
rs757111744
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs757746489
|
- |
- |
|
rs758737171
|
LP/P |
Hyperinsulinemic hypoglycemia, familial, 3 (HHF3) [MIM:602485] |
|
rs763216519
|
Pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs764670084
|
- |
- |
|
rs764670084
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs768722066
|
- |
- |
|
rs769268803
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs769268803
|
Pathogenic |
not provided|Permanent neonatal diabetes mellitus [MedGen:C3661900|MONDO:MONDO:0100164,MedGen:C1833104,OMIM:PS606176,Orphanet:99885]; Hyperinsulinism due to glucokinase deficiency [MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299]; Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552]; Type 2 diabetes mellitus|Maturity-onset diabetes of the young type 2 [Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs769512330
|
- |
- |
|
rs770231054
|
Likely pathogenic |
Maturity onset diabetes mellitus in young [Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs772754004
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs772883420
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs773416476
|
LB/B |
- |
|
rs775137066
|
- |
- |
|
rs776407980
|
- |
- |
|
rs778418246
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs779828856
|
- |
- |
|
rs780715532
|
- |
- |
|
rs781110394
|
- |
- |
|
rs782085638
|
Pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs786204720
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs794727839
|
Likely pathogenic |
not provided|Maturity-onset diabetes of the young type 2|Maturity onset diabetes mellitus in young|Monogenic diabetes|not specified [MedGen:C3661900|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|MedGen:CN169374] |
|
rs796161389
|
Pathogenic/Likely pathogenic |
Glycogen storage disease, type II|not provided [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365|MedGen:C3661900] |
|
rs797044727
|
Likely pathogenic |
Fabry disease|not provided [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324|MedGen:C3661900] |
|
rs797044749
|
Pathogenic/Likely pathogenic |
Fabry disease|not provided|Cardiovascular phenotype [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324|MedGen:C3661900|MedGen:CN230736] |
|
rs797044774
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs80356655
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs80356655
|
Pathogenic |
Maturity-onset diabetes of the young type 2|not provided|Permanent neonatal diabetes mellitus 1|Maturity onset diabetes mellitus in young|Type 2 diabetes mellitus|Hyperinsulinism due to glucokinase deficiency|Monogenic diabetes [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900|MONDO:MONDO:0100165,MedGen:C5393570,OMIM:606176|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853|MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs866904446
|
Pathogenic/Likely pathogenic |
Glycogen storage disease, type VII [MONDO:MONDO:0009295,MedGen:C0017926,OMIM:232800,Orphanet:371] |
|
rs869312136
|
US |
Fabry disease (FD) [MIM:301500] |
|
rs869312137
|
US |
Fabry disease (FD) [MIM:301500] |
|
rs869312138
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312153
|
US |
Fabry disease (FD) [MIM:301500] |
|
rs869312159
|
US |
Fabry disease (FD) [MIM:301500] |
|
rs869312160
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312161
|
US |
Fabry disease (FD) [MIM:301500] |
|
rs869312163
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312214
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312218
|
Pathogenic |
Fabry disease|not provided [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324|MedGen:C3661900] |
|
rs869312224
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312254
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312255
|
Likely pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs869312256
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312270
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312317
|
Likely pathogenic |
Fabry disease|not provided [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324|MedGen:C3661900] |
|
rs869312318
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312393
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312396
|
Likely pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs869312399
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312407
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312408
|
Likely pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs879050821
|
LP/P |
GM1-gangliosidosis 1 (GM1G1) [MIM:230500] |
|
rs886041315
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs886042079
|
LB/B |
- |
|
rs886042079
|
Likely pathogenic |
Infantile GM1 gangliosidosis [MONDO:MONDO:0009260,MedGen:C0268271,OMIM:230500,Orphanet:354,Orphanet:79255] |
|
rs886042088
|
Pathogenic |
Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase [MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239] |
|
rs886042097
|
Likely pathogenic |
not provided|Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase [MedGen:C3661900|MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239] |
|
rs886042961
|
Pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs886044843
|
Pathogenic/Likely pathogenic |
not provided|Fabry disease [MedGen:C3661900|Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs886044845
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs915070690
|
Likely pathogenic |
Deficiency of galactokinase [MONDO:MONDO:0009255,MedGen:C0268155,OMIM:230200,Orphanet:352,Orphanet:79237] |
|
rs968221254
|
LP/P |
Mucopolysaccharidosis 4B (MPS4B) [MIM:253010] |
|
rs981970282
|
- |
- |
hsa00053
|
Ascorbate and aldarate metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
-
|
LP/P |
Developmental and epileptic encephalopathy 84 (DEE84) [MIM:618792] |
|
.
|
- |
- |
|
rs11509436
|
LB/B |
- |
|
rs11509438
|
LB/B |
- |
|
rs11509439
|
LB/B |
- |
|
rs1170817007
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs121912707
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Seizure|Pyridoxine-dependent epilepsy caused by ALDH7A1 mutant [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|Human Phenotype Ontology:HP:0001250,Human Phenotype Ontology:HP:0001275,Human Phenotype Ontology:HP:0001303,Human Phenotype Ontology:HP:0002125,Human Phenotype Ontology:HP:0002182,Human Phenotype Ontology:HP:0002279,Human Phenotype Ontology:HP:0002306,Human Phenotype Ontology:HP:0002348,Human Phenotype Ontology:HP:0002391,Human Phenotype Ontology:HP:0002417,Human Phenotype Ontology:HP:0002430,Human Phenotype Ontology:HP:0002431,Human Phenotype Ontology:HP:0002432,Human Phenotype Ontology:HP:0002434,Human Phenotype Ontology:HP:0002437,Human Phenotype Ontology:HP:0002466,Human Phenotype Ontology:HP:0002479,Human Phenotype Ontology:HP:0002794,Human Phenotype Ontology:HP:0006997,Human Phenotype Ontology:HP:0010520,MedGen:C0036572|MONDO:MONDO:0020741,MedGen:CN293409] |
|
rs121912711
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs1239594775
|
- |
- |
|
rs1292504288
|
- |
- |
|
rs1311982393
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1348837644
|
- |
- |
|
rs138887023
|
- |
- |
|
rs1454273149
|
- |
- |
|
rs146556418
|
- |
- |
|
rs1475371630
|
- |
- |
|
rs148563375
|
- |
- |
|
rs150526754
|
- |
- |
|
rs151151350
|
- |
- |
|
rs1750309299
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1750388096
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs200000745
|
- |
- |
|
rs200602157
|
- |
- |
|
rs201321507
|
- |
- |
|
rs201522765
|
- |
- |
|
rs201835306
|
- |
- |
|
rs201894374
|
US |
Developmental and epileptic encephalopathy 84 (DEE84) [MIM:618792] |
|
rs201948406
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Inborn genetic diseases [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs2458502
|
- |
- |
|
rs369608407
|
Pathogenic/Likely pathogenic |
Epileptic encephalopathy|Developmental and epileptic encephalopathy, 84 [Human Phenotype Ontology:HP:0200134,MedGen:C0543888|MONDO:MONDO:0032918,MedGen:C5394081,OMIM:618792] |
|
rs372660425
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs556400964
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs573040804
|
- |
- |
|
rs61755740
|
- |
- |
|
rs757707616
|
- |
- |
|
rs761295869
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs762922297
|
- |
- |
|
rs773503933
|
- |
- |
|
rs776421832
|
- |
- |
|
rs796052271
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs864622558
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
hsa00061
|
Fatty acid biosynthesis
|
dbSNP |
Type |
Disease name |
|
.
|
- |
- |
|
rs1009899437
|
- |
- |
|
rs1018160528
|
- |
- |
|
rs113931914
|
LB/B |
- |
|
rs1357271377
|
US |
A colorectal cancer sample |
|
rs1379750290
|
- |
- |
|
rs1384884525
|
- |
- |
|
rs139276176
|
- |
- |
|
rs139545909
|
- |
- |
|
rs140112183
|
- |
- |
|
rs141275719
|
- |
- |
|
rs144457204
|
- |
- |
|
rs1464624373
|
- |
- |
|
rs148026894
|
- |
- |
|
rs148840593
|
- |
- |
|
rs149224679
|
- |
- |
|
rs1555668215
|
- |
- |
|
rs17848945
|
- |
- |
|
rs200775885
|
- |
- |
|
rs200840955
|
- |
- |
|
rs200842352
|
- |
- |
|
rs201182683
|
- |
- |
|
rs201551371
|
- |
- |
|
rs2228307
|
LB/B |
- |
|
rs368171697
|
- |
- |
|
rs370433029
|
- |
- |
|
rs45489599
|
- |
- |
|
rs527625651
|
- |
- |
|
rs536230471
|
- |
- |
|
rs539939995
|
- |
- |
|
rs546995952
|
- |
- |
|
rs549257982
|
- |
- |
|
rs557050126
|
- |
- |
|
rs748930040
|
- |
- |
|
rs750541652
|
- |
- |
|
rs752767411
|
- |
- |
|
rs753704338
|
- |
- |
|
rs755372392
|
- |
- |
|
rs755971315
|
- |
- |
|
rs756482744
|
- |
- |
|
rs758221850
|
- |
- |
|
rs758311283
|
- |
- |
|
rs758552144
|
- |
- |
|
rs759583791
|
- |
- |
|
rs761208637
|
- |
- |
|
rs763857057
|
- |
- |
|
rs766712508
|
- |
- |
|
rs766955776
|
- |
- |
|
rs767347856
|
- |
- |
|
rs769391843
|
- |
- |
|
rs769948189
|
- |
- |
|
rs775705403
|
- |
- |
|
rs779383660
|
- |
- |
|
rs80133417
|
- |
- |
|
rs887438250
|
- |
- |
|
rs9890362
|
- |
- |
hsa00062
|
Fatty acid elongation
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
-
|
Likely pathogenic |
Deficiency of 3-hydroxyacyl-CoA dehydrogenase [MONDO:MONDO:0017715,MedGen:C1291230,OMIM:231530,Orphanet:309127,Orphanet:71212] |
|
-
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
-
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
.
|
- |
- |
|
rs104886492
|
US |
HSD10 mitochondrial disease (HSD10MD) [MIM:300438] |
|
rs1049568
|
- |
- |
|
rs1057519286
|
Pathogenic |
Dystonia, childhood-onset, with optic atrophy and basal ganglia abnormalities|Childhood Onset Dystonias [MONDO:MONDO:0015003,MedGen:C4310634,OMIM:617282,Orphanet:508093|MedGen:C0752202]; Optic atrophy|not provided [Human Phenotype Ontology:HP:0000648,Human Phenotype Ontology:HP:0007751,Human Phenotype Ontology:HP:0007855,MONDO:MONDO:0003608,MedGen:C0029124|MedGen:C3661900] |
|
rs112441786
|
- |
- |
|
rs1128400
|
- |
- |
|
rs11544658
|
LB/B |
- |
|
rs120074140
|
LP/P |
3-ketothiolase deficiency (3KTD) [MIM:203750] |
|
rs120074141
|
LP/P |
3-ketothiolase deficiency (3KTD) [MIM:203750] |
|
rs120074145
|
LP/P |
3-ketothiolase deficiency (3KTD) [MIM:203750] |
|
rs1202368985
|
- |
- |
|
rs1233969418
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1245431558
|
- |
- |
|
rs1256975692
|
- |
- |
|
rs1259755308
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs1278227329
|
Pathogenic/Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase|not provided [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134|MedGen:C3661900] |
|
rs1296824835
|
- |
- |
|
rs13222
|
Pathogenic |
46,XY disorder of sex development due to testicular 17,20-desmolase deficiency [Gene:6994,MONDO:MONDO:0013664,MedGen:C1839840,OMIM:614279,Orphanet:443087] |
|
rs1355672978
|
- |
- |
|
rs137852695
|
Pathogenic |
Neuronal ceroid lipofuscinosis 1|not provided|Neuronal ceroid lipofuscinosis|Inborn genetic diseases [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MedGen:C3661900|MONDO:MONDO:0016295,MedGen:C0027877,OMIM:PS256730,Orphanet:216,Orphanet:79263|MeSH:D030342,MedGen:C0950123] |
|
rs137852696
|
Pathogenic |
Neuronal ceroid lipofuscinosis 1|not provided|Retinitis pigmentosa|Inborn genetic diseases|PPT1-related condition [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MedGen:C3661900|Human Phenotype Ontology:HP:0000547,MONDO:MONDO:0019200,MeSH:D012174,MedGen:C0035334,OMIM:268000,OMIM:PS268000,Orphanet:791|MeSH:D030342,MedGen:C0950123|] |
|
rs137852697
|
Pathogenic/Likely pathogenic |
Neuronal ceroid lipofuscinosis 1|not provided [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MedGen:C3661900] |
|
rs137852698
|
Pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs137852700
|
- |
- |
|
rs137852700
|
Pathogenic/Likely pathogenic |
Neuronal ceroid lipofuscinosis 1|not provided|Neuronal Ceroid-Lipofuscinosis, Recessive|Neuronal ceroid lipofuscinosis|Inborn genetic diseases|PPT1-related condition [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MedGen:C3661900|MedGen:CN239323|MONDO:MONDO:0016295,MedGen:C0027877,OMIM:PS256730,Orphanet:216,Orphanet:79263|MeSH:D030342,MedGen:C0950123|] |
|
rs137852702
|
Pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs137853096
|
LP/P |
D-bifunctional protein deficiency (DBPD) [MIM:261515] |
|
rs137853101
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs137853102
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs138675307
|
- |
- |
|
rs1392361503
|
Pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs140387106
|
- |
- |
|
rs143657539
|
Pathogenic/Likely pathogenic |
Inborn genetic diseases|Neuronal ceroid lipofuscinosis 1|Neuronal ceroid lipofuscinosis [MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MONDO:MONDO:0016295,MedGen:C0027877,OMIM:PS256730,Orphanet:216,Orphanet:79263] |
|
rs1437567292
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs144457204
|
- |
- |
|
rs147168294
|
- |
- |
|
rs1477443863
|
Pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs148412181
|
Pathogenic/Likely pathogenic |
Neuronal ceroid lipofuscinosis 1|not provided|Neuronal ceroid lipofuscinosis|Global developmental delay [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MedGen:C3661900|MONDO:MONDO:0016295,MedGen:C0027877,OMIM:PS256730,Orphanet:216,Orphanet:79263|Human Phenotype Ontology:HP:0000754,Human Phenotype Ontology:HP:0001255,Human Phenotype Ontology:HP:0001263,Human Phenotype Ontology:HP:0001277,Human Phenotype Ontology:HP:0001292,Human Phenotype Ontology:HP:0002433,Human Phenotype Ontology:HP:0002473,Human Phenotype Ontology:HP:0002532,Human Phenotype Ontology:HP:0006793,Human Phenotype Ontology:HP:0006867,Human Phenotype Ontology:HP:0006885,Human Phenotype Ontology:HP:0006935,Human Phenotype Ontology:HP:0007005,Human Phenotype Ontology:HP:0007094,Human Phenotype Ontology:HP:0007106,Human Phenotype Ontology:HP:0007174,Human Phenotype Ontology:HP:0007224,Human Phenotype Ontology:HP:0007228,Human Phenotype Ontology:HP:0007342,Human Phenotype Ontology:HP:0025356,MedGen:C0557874] |
|
rs148412181
|
Pathogenic/Likely pathogenic |
Neuronal ceroid lipofuscinosis 1|Retinitis pigmentosa|not provided|Inborn genetic diseases [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|Human Phenotype Ontology:HP:0000547,MONDO:MONDO:0019200,MeSH:D012174,MedGen:C0035334,OMIM:268000,OMIM:PS268000,Orphanet:791|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs149033118
|
- |
- |
|
rs149295644
|
- |
- |
|
rs1557714302
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs1561442127
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs1564317029
|
- |
- |
|
rs1565291981
|
- |
- |
|
rs1591363760
|
Pathogenic/Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1591374629
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1591374632
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1649619197
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs199695749
|
- |
- |
|
rs200195789
|
- |
- |
|
rs200908381
|
- |
- |
|
rs202015012
|
- |
- |
|
rs202093592
|
- |
- |
|
rs2124470378
|
Pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs2124474566
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs2124484378
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs2134768688
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs2134768866
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs367902441
|
- |
- |
|
rs370245703
|
- |
- |
|
rs370433029
|
- |
- |
|
rs370720208
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of acetyl-CoA acetyltransferase [MedGen:C3661900|MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs371834662
|
- |
- |
|
rs374810645
|
- |
- |
|
rs375253960
|
- |
- |
|
rs386833626
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833627
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833647
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833648
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833649
|
- |
- |
|
rs386833649
|
Pathogenic/Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833650
|
Pathogenic |
Neuronal ceroid lipofuscinosis 1|not provided [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MedGen:C3661900] |
|
rs386833654
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833655
|
- |
- |
|
rs386833655
|
Pathogenic/Likely pathogenic |
Neuronal ceroid lipofuscinosis 1|not provided|Inborn genetic diseases|Neuronal ceroid lipofuscinosis [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MedGen:C3661900|MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0016295,MedGen:C0027877,OMIM:PS256730,Orphanet:216,Orphanet:79263] |
|
rs386833656
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833657
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833658
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833661
|
Pathogenic/Likely pathogenic |
Neuronal ceroid lipofuscinosis 1|Neuronal ceroid lipofuscinosis|Spastic ataxia [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MONDO:MONDO:0016295,MedGen:C0027877,OMIM:PS256730,Orphanet:216,Orphanet:79263|Human Phenotype Ontology:HP:0002497,MONDO:MONDO:0017845,MedGen:C1849156,OMIM:PS108600,Orphanet:316226] |
|
rs386833663
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833665
|
Pathogenic/Likely pathogenic |
Neuronal ceroid lipofuscinosis 1|not provided|Neuronal ceroid lipofuscinosis [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MedGen:C3661900|MONDO:MONDO:0016295,MedGen:C0027877,OMIM:PS256730,Orphanet:216,Orphanet:79263] |
|
rs386833666
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833668
|
Pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833669
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs532190594
|
Pathogenic |
not provided|Deficiency of acetyl-CoA acetyltransferase [MedGen:C3661900|MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs541517496
|
Pathogenic/Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs545752791
|
- |
- |
|
rs550705310
|
- |
- |
|
rs556081405
|
- |
- |
|
rs56069624
|
- |
- |
|
rs566644923
|
- |
- |
|
rs577954688
|
- |
- |
|
rs74428123
|
- |
- |
|
rs745423719
|
- |
- |
|
rs748303093
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of acetyl-CoA acetyltransferase [MedGen:C3661900|MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs749485571
|
- |
- |
|
rs750195919
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs752087770
|
- |
- |
|
rs753816946
|
- |
- |
|
rs756168037
|
- |
- |
|
rs758553855
|
- |
- |
|
rs759218713
|
LP/P |
Dystonia, childhood-onset, with optic atrophy and basal ganglia abnormalities (DYTOABG) [MIM:617282] |
|
rs761282960
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs763463911
|
- |
- |
|
rs763536047
|
- |
- |
|
rs763857057
|
- |
- |
|
rs764051026
|
Likely pathogenic |
not provided|Neuronal ceroid lipofuscinosis 1 [MedGen:C3661900|MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs766961054
|
- |
- |
|
rs768448235
|
- |
- |
|
rs768550964
|
- |
- |
|
rs768742328
|
- |
- |
|
rs768902719
|
- |
- |
|
rs772087249
|
- |
- |
|
rs772780687
|
- |
- |
|
rs773491386
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs774809147
|
- |
- |
|
rs776806726
|
- |
- |
|
rs776965057
|
- |
- |
|
rs779135938
|
Likely pathogenic |
Deficiency of 3-hydroxyacyl-CoA dehydrogenase|Hyperinsulinemic hypoglycemia|Hyperinsulinemic hypoglycemia, familial, 4 [MONDO:MONDO:0017715,MedGen:C1291230,OMIM:231530,Orphanet:309127,Orphanet:71212|Human Phenotype Ontology:HP:0000825,MONDO:MONDO:0005803,MedGen:C1864903,OMIM:PS256450,Orphanet:443095|MONDO:MONDO:0012382,MedGen:C1864948,OMIM:609975,Orphanet:71212] |
|
rs779634821
|
- |
- |
|
rs781200594
|
- |
- |
|
rs782266548
|
- |
- |
|
rs782328441
|
- |
- |
|
rs796052925
|
Pathogenic/Likely pathogenic |
not provided|Neuronal ceroid lipofuscinosis 1 [MedGen:C3661900|MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs80133417
|
- |
- |
|
rs866346652
|
- |
- |
|
rs878853322
|
Pathogenic/Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs878853323
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs878853324
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs886037927
|
Likely pathogenic |
HSD10 mitochondrial disease [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295] |
|
rs887438250
|
- |
- |
hsa00071
|
Fatty acid degradation
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
-
|
LP/P |
Acyl-CoA dehydrogenase very long-chain deficiency (ACADVLD) [MIM:201475] |
|
-
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
-
|
Likely pathogenic |
Deficiency of 3-hydroxyacyl-CoA dehydrogenase [MONDO:MONDO:0017715,MedGen:C1291230,OMIM:231530,Orphanet:309127,Orphanet:71212] |
|
-
|
Pathogenic |
Acyl-CoA oxidase deficiency [MONDO:MONDO:0009919,MedGen:C1849678,OMIM:264470,Orphanet:2971] |
|
-
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
-
|
Pathogenic/Likely pathogenic |
Carnitine palmitoyltransferase II deficiency|Encephalopathy, acute, infection-induced, susceptibility to, 4 [MONDO:MONDO:0015515,MedGen:C0342790,Orphanet:157|MONDO:MONDO:0013633,MedGen:C3280160,OMIM:614212,Orphanet:263524] |
|
-
|
LP/P |
Microphthalmia, isolated, 8 (MCOP8) [MIM:615113] |
|
-
|
Likely pathogenic |
Isolated microphthalmia 8 [MONDO:MONDO:0014050,MedGen:C3554524,OMIM:615113,Orphanet:2542] |
|
-
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
.
|
- |
- |
|
rs1041969
|
LB/B |
- |
|
rs104886492
|
US |
HSD10 mitochondrial disease (HSD10MD) [MIM:300438] |
|
rs1057516564
|
Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs1057517492
|
Pathogenic/Likely pathogenic |
Carnitine palmitoyl transferase II deficiency, severe infantile form|Carnitine palmitoyl transferase II deficiency, neonatal form|Carnitine palmitoyl transferase II deficiency, myopathic form|not provided [MONDO:MONDO:0010914,MedGen:C1833511,OMIM:600649,Orphanet:228305|MONDO:MONDO:0012136,MedGen:C1833518,OMIM:608836,Orphanet:228308|MONDO:MONDO:0009704,MedGen:C1833508,OMIM:255110,Orphanet:157,Orphanet:228302|MedGen:C3661900] |
|
rs1057517517
|
Likely pathogenic |
Carnitine palmitoyl transferase II deficiency, severe infantile form|Carnitine palmitoyl transferase II deficiency, neonatal form|Carnitine palmitoyl transferase II deficiency, myopathic form [MONDO:MONDO:0010914,MedGen:C1833511,OMIM:600649,Orphanet:228305|MONDO:MONDO:0012136,MedGen:C1833518,OMIM:608836,Orphanet:228308|MONDO:MONDO:0009704,MedGen:C1833508,OMIM:255110,Orphanet:157,Orphanet:228302] |
|
rs1126673
|
- |
- |
|
rs1135640
|
- |
- |
|
rs115638369
|
- |
- |
|
rs1170817007
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs118204090
|
Pathogenic |
Acyl-CoA oxidase deficiency [MONDO:MONDO:0009919,MedGen:C1849678,OMIM:264470,Orphanet:2971] |
|
rs118204091
|
- |
- |
|
rs118204091
|
Pathogenic |
Acyl-CoA oxidase deficiency [MONDO:MONDO:0009919,MedGen:C1849678,OMIM:264470,Orphanet:2971] |
|
rs118204092
|
Pathogenic |
Acyl-CoA oxidase deficiency [MONDO:MONDO:0009919,MedGen:C1849678,OMIM:264470,Orphanet:2971] |
|
rs1196921350
|
- |
- |
|
rs120074140
|
LP/P |
3-ketothiolase deficiency (3KTD) [MIM:203750] |
|
rs120074141
|
LP/P |
3-ketothiolase deficiency (3KTD) [MIM:203750] |
|
rs120074145
|
LP/P |
3-ketothiolase deficiency (3KTD) [MIM:203750] |
|
rs1202368985
|
- |
- |
|
rs121434275
|
LP/P |
Acyl-CoA dehydrogenase medium-chain deficiency (ACADMD) [MIM:201450] |
|
rs121434278
|
- |
- |
|
rs121434278
|
LP/P |
Acyl-CoA dehydrogenase medium-chain deficiency (ACADMD) [MIM:201450] |
|
rs121434279
|
LP/P |
Acyl-CoA dehydrogenase medium-chain deficiency (ACADMD) [MIM:201450] |
|
rs121434281
|
LP/P |
Acyl-CoA dehydrogenase medium-chain deficiency (ACADMD) [MIM:201450] |
|
rs121434283
|
LP/P |
Acyl-CoA dehydrogenase medium-chain deficiency (ACADMD) [MIM:201450] |
|
rs121912707
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Seizure|Pyridoxine-dependent epilepsy caused by ALDH7A1 mutant [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|Human Phenotype Ontology:HP:0001250,Human Phenotype Ontology:HP:0001275,Human Phenotype Ontology:HP:0001303,Human Phenotype Ontology:HP:0002125,Human Phenotype Ontology:HP:0002182,Human Phenotype Ontology:HP:0002279,Human Phenotype Ontology:HP:0002306,Human Phenotype Ontology:HP:0002348,Human Phenotype Ontology:HP:0002391,Human Phenotype Ontology:HP:0002417,Human Phenotype Ontology:HP:0002430,Human Phenotype Ontology:HP:0002431,Human Phenotype Ontology:HP:0002432,Human Phenotype Ontology:HP:0002434,Human Phenotype Ontology:HP:0002437,Human Phenotype Ontology:HP:0002466,Human Phenotype Ontology:HP:0002479,Human Phenotype Ontology:HP:0002794,Human Phenotype Ontology:HP:0006997,Human Phenotype Ontology:HP:0010520,MedGen:C0036572|MONDO:MONDO:0020741,MedGen:CN293409] |
|
rs121912711
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs121918528
|
Pathogenic/Likely pathogenic |
Carnitine palmitoyl transferase II deficiency, severe infantile form|Carnitine palmitoyltransferase II deficiency|Carnitine palmitoyl transferase II deficiency, myopathic form|Carnitine palmitoyl transferase II deficiency, neonatal form|Carnitine palmitoyl transferase II deficiency, neonatal form [MONDO:MONDO:0010914,MedGen:C1833511,OMIM:600649,Orphanet:228305|MONDO:MONDO:0015515,MedGen:C0342790,Orphanet:157|MONDO:MONDO:0009704,MedGen:C1833508,OMIM:255110,Orphanet:157,Orphanet:228302|MONDO:MONDO:0012136,MedGen:C1833518,OMIM:608836,Orphanet:228308|MONDO:MONDO:0012136,MedGen:C1833518,OMIM:608836,Orphanet:228308]; Carnitine palmitoyl transferase II deficiency, myopathic form [MONDO:MONDO:0009704,MedGen:C1833508,OMIM:255110,Orphanet:157,Orphanet:228302]; Carnitine palmitoyl transferase II deficiency, severe infantile form [MONDO:MONDO:0010914,MedGen:C1833511,OMIM:600649,Orphanet:228305]; Encephalopathy, acute, infection-induced, susceptibility to, 4|not provided|Encephalopathy, acute, infection-induced, susceptibility to, 4 [MONDO:MONDO:0013633,MedGen:C3280160,OMIM:614212,Orphanet:263524|MedGen:C3661900|MONDO:MONDO:0013633,MedGen:C3280160,OMIM:614212,Orphanet:263524] |
|
rs1229984
|
LB/B |
- |
|
rs1233969418
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1256975692
|
- |
- |
|
rs1260394550
|
Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs1278227329
|
Pathogenic/Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase|not provided [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134|MedGen:C3661900] |
|
rs1296824835
|
- |
- |
|
rs1311982393
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs137853096
|
LP/P |
D-bifunctional protein deficiency (DBPD) [MIM:261515] |
|
rs137853101
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs137853102
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs1392361503
|
Pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs1401737158
|
- |
- |
|
rs140629318
|
LP/P |
Acyl-CoA dehydrogenase very long-chain deficiency (ACADVLD) [MIM:201475] |
|
rs1432183079
|
LP/P |
Acyl-CoA dehydrogenase very long-chain deficiency (ACADVLD) [MIM:201475] |
|
rs1437567292
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs145712373
|
- |
- |
|
rs1466072211
|
- |
- |
|
rs1469108369
|
Likely pathogenic |
Carnitine palmitoyl transferase II deficiency, severe infantile form [MONDO:MONDO:0010914,MedGen:C1833511,OMIM:600649,Orphanet:228305] |
|
rs1471862905
|
- |
- |
|
rs149408684
|
- |
- |
|
rs1553169771
|
Likely pathogenic |
Carnitine palmitoyl transferase II deficiency, severe infantile form [MONDO:MONDO:0010914,MedGen:C1833511,OMIM:600649,Orphanet:228305] |
|
rs1553170005
|
Likely pathogenic |
Carnitine palmitoyl transferase II deficiency, severe infantile form [MONDO:MONDO:0010914,MedGen:C1833511,OMIM:600649,Orphanet:228305] |
|
rs1557466604
|
Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs1561442127
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs1565291981
|
- |
- |
|
rs1567876984
|
Pathogenic/Likely pathogenic |
ACOX1-related condition|Mitchell syndrome|not provided|ACOX1-related disorders|Acyl-CoA oxidase deficiency|Inborn genetic diseases [|MONDO:MONDO:0030073,MedGen:C5394554,OMIM:618960|MedGen:C3661900||MONDO:MONDO:0009919,MedGen:C1849678,OMIM:264470,Orphanet:2971|MeSH:D030342,MedGen:C0950123] |
|
rs1570876467
|
Pathogenic/Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs1591363760
|
Pathogenic/Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1591374629
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1591374632
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1750309299
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1750388096
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1799821
|
- |
- |
|
rs1799822
|
- |
- |
|
rs192275019
|
- |
- |
|
rs199695749
|
- |
- |
|
rs200080591
|
Pathogenic |
Carnitine palmitoyltransferase II deficiency|Carnitine palmitoyl transferase II deficiency, severe infantile form|Encephalopathy, acute, infection-induced, susceptibility to, 4 [MONDO:MONDO:0015515,MedGen:C0342790,Orphanet:157|MONDO:MONDO:0010914,MedGen:C1833511,OMIM:600649,Orphanet:228305|MONDO:MONDO:0013633,MedGen:C3280160,OMIM:614212,Orphanet:263524] |
|
rs200366828
|
LP/P |
Acyl-CoA dehydrogenase very long-chain deficiency (ACADVLD) [MIM:201475] |
|
rs201865375
|
- |
- |
|
rs201865375
|
Pathogenic/Likely pathogenic |
Mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency|not provided [MONDO:MONDO:0014563,MedGen:C4225391,OMIM:616277,Orphanet:255241|MedGen:C3661900] |
|
rs201934016
|
- |
- |
|
rs201948406
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Inborn genetic diseases [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs201996784
|
- |
- |
|
rs202015012
|
- |
- |
|
rs2066702
|
LB/B |
- |
|
rs2100417374
|
Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs2100417476
|
Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs2100453612
|
Pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs2134768688
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs2134768866
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs2229291
|
- |
- |
|
rs28730628
|
LB/B |
- |
|
rs28936674
|
- |
- |
|
rs28936674
|
Pathogenic/Likely pathogenic |
Carnitine palmitoyl transferase II deficiency, severe infantile form|Carnitine palmitoyltransferase II deficiency|Encephalopathy, acute, infection-induced, susceptibility to, 4 [MONDO:MONDO:0010914,MedGen:C1833511,OMIM:600649,Orphanet:228305|MONDO:MONDO:0015515,MedGen:C0342790,Orphanet:157|MONDO:MONDO:0013633,MedGen:C3280160,OMIM:614212,Orphanet:263524] |
|
rs35385902
|
LB/B |
- |
|
rs367861880
|
- |
- |
|
rs367902441
|
- |
- |
|
rs368311455
|
- |
- |
|
rs368311455
|
Pathogenic/Likely pathogenic |
Carnitine palmitoyltransferase II deficiency|Carnitine palmitoyl transferase II deficiency, severe infantile form|not provided|Encephalopathy, acute, infection-induced, susceptibility to, 4 [MONDO:MONDO:0015515,MedGen:C0342790,Orphanet:157|MONDO:MONDO:0010914,MedGen:C1833511,OMIM:600649,Orphanet:228305|MedGen:C3661900|MONDO:MONDO:0013633,MedGen:C3280160,OMIM:614212,Orphanet:263524] |
|
rs370720208
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of acetyl-CoA acetyltransferase [MedGen:C3661900|MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs371582393
|
Likely pathogenic |
Mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency [MONDO:MONDO:0014563,MedGen:C4225391,OMIM:616277,Orphanet:255241] |
|
rs371834662
|
- |
- |
|
rs372660425
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs3744032
|
- |
- |
|
rs375032130
|
Pathogenic/Likely pathogenic |
not provided|Mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency|See cases [MedGen:C3661900|MONDO:MONDO:0014563,MedGen:C4225391,OMIM:616277,Orphanet:255241|] |
|
rs375266808
|
Pathogenic |
Mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency|not provided [MONDO:MONDO:0014563,MedGen:C4225391,OMIM:616277,Orphanet:255241|MedGen:C3661900] |
|
rs377699817
|
- |
- |
|
rs387906253
|
LP/P |
Acyl-CoA dehydrogenase very long-chain deficiency (ACADVLD) [MIM:201475] |
|
rs515726177
|
Pathogenic/Likely pathogenic |
Carnitine palmitoyltransferase II deficiency|not provided|Carnitine palmitoyl transferase II deficiency, severe infantile form|Carnitine palmitoyl transferase II deficiency, neonatal form [MONDO:MONDO:0015515,MedGen:C0342790,Orphanet:157|MedGen:C3661900|MONDO:MONDO:0010914,MedGen:C1833511,OMIM:600649,Orphanet:228305|MONDO:MONDO:0012136,MedGen:C1833518,OMIM:608836,Orphanet:228308]; Encephalopathy, acute, infection-induced, susceptibility to, 4 [MONDO:MONDO:0013633,MedGen:C3280160,OMIM:614212,Orphanet:263524]; Carnitine palmitoyl transferase II deficiency, severe infantile form [MONDO:MONDO:0010914,MedGen:C1833511,OMIM:600649,Orphanet:228305]; Carnitine palmitoyl transferase II deficiency, myopathic form|Encephalopathy, acute, infection-induced, susceptibility to, 4 [MONDO:MONDO:0009704,MedGen:C1833508,OMIM:255110,Orphanet:157,Orphanet:228302|MONDO:MONDO:0013633,MedGen:C3280160,OMIM:614212,Orphanet:263524] |
|
rs532190594
|
Pathogenic |
not provided|Deficiency of acetyl-CoA acetyltransferase [MedGen:C3661900|MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs539239516
|
Pathogenic |
Carnitine palmitoyltransferase II deficiency|Encephalopathy, acute, infection-induced, susceptibility to, 4 [MONDO:MONDO:0015515,MedGen:C0342790,Orphanet:157|MONDO:MONDO:0013633,MedGen:C3280160,OMIM:614212,Orphanet:263524] |
|
rs541517496
|
Pathogenic/Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs545215807
|
LP/P |
Acyl-CoA dehydrogenase very long-chain deficiency (ACADVLD) [MIM:201475] |
|
rs547918064
|
- |
- |
|
rs547918064
|
Likely pathogenic |
not provided|Isolated microphthalmia 8 [MedGen:C3661900|MONDO:MONDO:0014050,MedGen:C3554524,OMIM:615113,Orphanet:2542] |
|
rs550705310
|
- |
- |
|
rs56251804
|
- |
- |
|
rs574370650
|
- |
- |
|
rs577954688
|
- |
- |
|
rs74315293
|
- |
- |
|
rs74315293
|
Pathogenic |
Carnitine palmitoyl transferase II deficiency, severe infantile form|Carnitine palmitoyltransferase II deficiency|Carnitine palmitoyl transferase II deficiency, myopathic form|not provided|Carnitine palmitoyl transferase II deficiency, neonatal form [MONDO:MONDO:0010914,MedGen:C1833511,OMIM:600649,Orphanet:228305|MONDO:MONDO:0015515,MedGen:C0342790,Orphanet:157|MONDO:MONDO:0009704,MedGen:C1833508,OMIM:255110,Orphanet:157,Orphanet:228302|MedGen:C3661900|MONDO:MONDO:0012136,MedGen:C1833518,OMIM:608836,Orphanet:228308]; Carnitine palmitoyl transferase II deficiency, myopathic form [MONDO:MONDO:0009704,MedGen:C1833508,OMIM:255110,Orphanet:157,Orphanet:228302]; Carnitine palmitoyl transferase II deficiency, severe infantile form [MONDO:MONDO:0010914,MedGen:C1833511,OMIM:600649,Orphanet:228305]; Encephalopathy, acute, infection-induced, susceptibility to, 4|Encephalopathy, acute, infection-induced, susceptibility to, 4 [MONDO:MONDO:0013633,MedGen:C3280160,OMIM:614212,Orphanet:263524|MONDO:MONDO:0013633,MedGen:C3280160,OMIM:614212,Orphanet:263524] |
|
rs74315294
|
- |
- |
|
rs74315294
|
Pathogenic/Likely pathogenic |
Carnitine palmitoyl transferase II deficiency, myopathic form|not provided|Carnitine palmitoyltransferase II deficiency|Carnitine palmitoyl transferase II deficiency, neonatal form|Carnitine palmitoyl transferase II deficiency, neonatal form [MONDO:MONDO:0009704,MedGen:C1833508,OMIM:255110,Orphanet:157,Orphanet:228302|MedGen:C3661900|MONDO:MONDO:0015515,MedGen:C0342790,Orphanet:157|MONDO:MONDO:0012136,MedGen:C1833518,OMIM:608836,Orphanet:228308|MONDO:MONDO:0012136,MedGen:C1833518,OMIM:608836,Orphanet:228308]; Carnitine palmitoyl transferase II deficiency, myopathic form [MONDO:MONDO:0009704,MedGen:C1833508,OMIM:255110,Orphanet:157,Orphanet:228302]; Carnitine palmitoyl transferase II deficiency, severe infantile form [MONDO:MONDO:0010914,MedGen:C1833511,OMIM:600649,Orphanet:228305]; Encephalopathy, acute, infection-induced, susceptibility to, 4|Carnitine palmitoyl transferase II deficiency, severe infantile form|Inborn genetic diseases|Rhabdomyolysis|Carnitine palmitoyl transferase II deficiency, neonatal form [MONDO:MONDO:0013633,MedGen:C3280160,OMIM:614212,Orphanet:263524|MONDO:MONDO:0010914,MedGen:C1833511,OMIM:600649,Orphanet:228305|MeSH:D030342,MedGen:C0950123|Human Phenotype Ontology:HP:0003201,MedGen:C0035410|MONDO:MONDO:0012136,MedGen:C1833518,OMIM:608836,Orphanet:228308]; Carnitine palmitoyl transferase II deficiency, severe infantile form|Abnormality of the musculature|Encephalopathy, acute, infection-induced, susceptibility to, 4 [MONDO:MONDO:0010914,MedGen:C1833511,OMIM:600649,Orphanet:228305|Human Phenotype Ontology:HP:0003011,Human Phenotype Ontology:HP:0003197,Human Phenotype Ontology:HP:0003708,MedGen:C4021745|MONDO:MONDO:0013633,MedGen:C3280160,OMIM:614212,Orphanet:263524] |
|
rs74315295
|
- |
- |
|
rs74315295
|
Pathogenic/Likely pathogenic |
Carnitine palmitoyl transferase II deficiency, myopathic form|Carnitine palmitoyl transferase II deficiency, severe infantile form|Carnitine palmitoyltransferase II deficiency|Carnitine palmitoyl transferase II deficiency, neonatal form|Encephalopathy, acute, infection-induced, susceptibility to, 4 [MONDO:MONDO:0009704,MedGen:C1833508,OMIM:255110,Orphanet:157,Orphanet:228302|MONDO:MONDO:0010914,MedGen:C1833511,OMIM:600649,Orphanet:228305|MONDO:MONDO:0015515,MedGen:C0342790,Orphanet:157|MONDO:MONDO:0012136,MedGen:C1833518,OMIM:608836,Orphanet:228308|MONDO:MONDO:0013633,MedGen:C3280160,OMIM:614212,Orphanet:263524]; Carnitine palmitoyl transferase II deficiency, neonatal form [MONDO:MONDO:0012136,MedGen:C1833518,OMIM:608836,Orphanet:228308]; Carnitine palmitoyl transferase II deficiency, severe infantile form [MONDO:MONDO:0010914,MedGen:C1833511,OMIM:600649,Orphanet:228305]; Carnitine palmitoyl transferase II deficiency, myopathic form|Carnitine palmitoyl transferase II deficiency, neonatal form [MONDO:MONDO:0009704,MedGen:C1833508,OMIM:255110,Orphanet:157,Orphanet:228302|MONDO:MONDO:0012136,MedGen:C1833518,OMIM:608836,Orphanet:228308]; Carnitine palmitoyl transferase II deficiency, severe infantile form|Seizure [MONDO:MONDO:0010914,MedGen:C1833511,OMIM:600649,Orphanet:228305|Human Phenotype Ontology:HP:0001250,Human Phenotype Ontology:HP:0001275,Human Phenotype Ontology:HP:0001303,Human Phenotype Ontology:HP:0002125,Human Phenotype Ontology:HP:0002182,Human Phenotype Ontology:HP:0002279,Human Phenotype Ontology:HP:0002306,Human Phenotype Ontology:HP:0002348,Human Phenotype Ontology:HP:0002391,Human Phenotype Ontology:HP:0002417,Human Phenotype Ontology:HP:0002430,Human Phenotype Ontology:HP:0002431,Human Phenotype Ontology:HP:0002432,Human Phenotype Ontology:HP:0002434,Human Phenotype Ontology:HP:0002437,Human Phenotype Ontology:HP:0002466,Human Phenotype Ontology:HP:0002479,Human Phenotype Ontology:HP:0002794,Human Phenotype Ontology:HP:0006997,Human Phenotype Ontology:HP:0010520,MedGen:C0036572]; Abnormality of the nervous system|Encephalopathy, acute, infection-induced, susceptibility to, 4 [Human Phenotype Ontology:HP:0000707,Human Phenotype Ontology:HP:0001333,Human Phenotype Ontology:HP:0006987,MONDO:MONDO:0002320,MedGen:C0497552|MONDO:MONDO:0013633,MedGen:C3280160,OMIM:614212,Orphanet:263524] |
|
rs74315300
|
Pathogenic |
Carnitine palmitoyl transferase II deficiency, myopathic form|Carnitine palmitoyltransferase II deficiency [MONDO:MONDO:0009704,MedGen:C1833508,OMIM:255110,Orphanet:157,Orphanet:228302|MONDO:MONDO:0015515,MedGen:C0342790,Orphanet:157] |
|
rs74428123
|
- |
- |
|
rs74451421
|
- |
- |
|
rs745423719
|
- |
- |
|
rs745844469
|
Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs747209153
|
- |
- |
|
rs748303093
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of acetyl-CoA acetyltransferase [MedGen:C3661900|MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs750195919
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs750389182
|
- |
- |
|
rs751557097
|
- |
- |
|
rs751557097
|
Pathogenic/Likely pathogenic |
Carnitine palmitoyltransferase II deficiency|Encephalopathy, acute, infection-induced, susceptibility to, 4 [MONDO:MONDO:0015515,MedGen:C0342790,Orphanet:157|MONDO:MONDO:0013633,MedGen:C3280160,OMIM:614212,Orphanet:263524] |
|
rs752737849
|
- |
- |
|
rs753816946
|
- |
- |
|
rs754386565
|
Pathogenic/Likely pathogenic |
Carnitine palmitoyl transferase II deficiency, neonatal form|Carnitine palmitoyl transferase II deficiency, myopathic form|Carnitine palmitoyl transferase II deficiency, severe infantile form|Encephalopathy, acute, infection-induced, susceptibility to, 4 [MONDO:MONDO:0012136,MedGen:C1833518,OMIM:608836,Orphanet:228308|MONDO:MONDO:0009704,MedGen:C1833508,OMIM:255110,Orphanet:157,Orphanet:228302|MONDO:MONDO:0010914,MedGen:C1833511,OMIM:600649,Orphanet:228305|MONDO:MONDO:0013633,MedGen:C3280160,OMIM:614212,Orphanet:263524]; Carnitine palmitoyl transferase II deficiency, severe infantile form [MONDO:MONDO:0010914,MedGen:C1833511,OMIM:600649,Orphanet:228305]; Carnitine palmitoyl transferase II deficiency, myopathic form [MONDO:MONDO:0009704,MedGen:C1833508,OMIM:255110,Orphanet:157,Orphanet:228302]; Carnitine palmitoyl transferase II deficiency, neonatal form|Carnitine palmitoyltransferase II deficiency|Encephalopathy, acute, infection-induced, susceptibility to, 4 [MONDO:MONDO:0012136,MedGen:C1833518,OMIM:608836,Orphanet:228308|MONDO:MONDO:0015515,MedGen:C0342790,Orphanet:157|MONDO:MONDO:0013633,MedGen:C3280160,OMIM:614212,Orphanet:263524] |
|
rs755331246
|
- |
- |
|
rs756168037
|
- |
- |
|
rs756326862
|
- |
- |
|
rs756414686
|
- |
- |
|
rs756931329
|
Pathogenic/Likely pathogenic |
Carnitine palmitoyl transferase II deficiency, severe infantile form|Carnitine palmitoyltransferase II deficiency|Carnitine palmitoyl transferase II deficiency, severe infantile form [MONDO:MONDO:0010914,MedGen:C1833511,OMIM:600649,Orphanet:228305|MONDO:MONDO:0015515,MedGen:C0342790,Orphanet:157|MONDO:MONDO:0010914,MedGen:C1833511,OMIM:600649,Orphanet:228305]; Carnitine palmitoyl transferase II deficiency, myopathic form [MONDO:MONDO:0009704,MedGen:C1833508,OMIM:255110,Orphanet:157,Orphanet:228302]; Encephalopathy, acute, infection-induced, susceptibility to, 4 [MONDO:MONDO:0013633,MedGen:C3280160,OMIM:614212,Orphanet:263524]; Carnitine palmitoyl transferase II deficiency, neonatal form|not provided|Encephalopathy, acute, infection-induced, susceptibility to, 4 [MONDO:MONDO:0012136,MedGen:C1833518,OMIM:608836,Orphanet:228308|MedGen:C3661900|MONDO:MONDO:0013633,MedGen:C3280160,OMIM:614212,Orphanet:263524] |
|
rs758723288
|
Likely pathogenic |
Mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency|not provided|ECHS1-related condition [MONDO:MONDO:0014563,MedGen:C4225391,OMIM:616277,Orphanet:255241|MedGen:C3661900|] |
|
rs75967634
|
- |
- |
|
rs761042153
|
- |
- |
|
rs761282960
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs761295869
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs761438840
|
Likely pathogenic |
Carnitine palmitoyl transferase II deficiency, neonatal form|Carnitine palmitoyl transferase II deficiency, myopathic form|Carnitine palmitoyl transferase II deficiency, severe infantile form [MONDO:MONDO:0012136,MedGen:C1833518,OMIM:608836,Orphanet:228308|MONDO:MONDO:0009704,MedGen:C1833508,OMIM:255110,Orphanet:157,Orphanet:228302|MONDO:MONDO:0010914,MedGen:C1833511,OMIM:600649,Orphanet:228305] |
|
rs763392896
|
- |
- |
|
rs768448235
|
- |
- |
|
rs768697532
|
- |
- |
|
rs769763635
|
- |
- |
|
rs771214714
|
Likely pathogenic |
Carnitine palmitoyl transferase II deficiency, neonatal form [MONDO:MONDO:0012136,MedGen:C1833518,OMIM:608836,Orphanet:228308] |
|
rs772087249
|
- |
- |
|
rs773491386
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs773503933
|
- |
- |
|
rs773677327
|
Pathogenic/Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency|not provided [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42|MedGen:C3661900] |
|
rs773966429
|
- |
- |
|
rs774716484
|
LP/P |
Acyl-CoA dehydrogenase very long-chain deficiency (ACADVLD) [MIM:201475] |
|
rs776421832
|
- |
- |
|
rs778743524
|
Pathogenic |
Carnitine palmitoyl transferase II deficiency, neonatal form|Carnitine palmitoyltransferase II deficiency [MONDO:MONDO:0012136,MedGen:C1833518,OMIM:608836,Orphanet:228308|MONDO:MONDO:0015515,MedGen:C0342790,Orphanet:157] |
|
rs779135938
|
Likely pathogenic |
Deficiency of 3-hydroxyacyl-CoA dehydrogenase|Hyperinsulinemic hypoglycemia|Hyperinsulinemic hypoglycemia, familial, 4 [MONDO:MONDO:0017715,MedGen:C1291230,OMIM:231530,Orphanet:309127,Orphanet:71212|Human Phenotype Ontology:HP:0000825,MONDO:MONDO:0005803,MedGen:C1864903,OMIM:PS256450,Orphanet:443095|MONDO:MONDO:0012382,MedGen:C1864948,OMIM:609975,Orphanet:71212] |
|
rs780940242
|
- |
- |
|
rs781507152
|
- |
- |
|
rs796052271
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs864622558
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs875989867
|
Pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs886037927
|
Likely pathogenic |
HSD10 mitochondrial disease [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295] |
hsa00100
|
Steroid biosynthesis
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
.
|
- |
- |
|
rs1202368985
|
- |
- |
|
rs1222153452
|
- |
- |
|
rs1249530918
|
LP/P |
Hypotrichosis 14 (HYPT14) [MIM:618275] |
|
rs1274851618
|
- |
- |
|
rs1291406206
|
- |
- |
|
rs13222
|
Pathogenic |
46,XY disorder of sex development due to testicular 17,20-desmolase deficiency [Gene:6994,MONDO:MONDO:0013664,MedGen:C1839840,OMIM:614279,Orphanet:443087] |
|
rs138675307
|
- |
- |
|
rs138781417
|
- |
- |
|
rs139230476
|
- |
- |
|
rs1392361503
|
Pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs144457204
|
- |
- |
|
rs148197561
|
- |
- |
|
rs149295644
|
- |
- |
|
rs150090274
|
- |
- |
|
rs1561442127
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs1564317029
|
- |
- |
|
rs17134592
|
- |
- |
|
rs1749878115
|
Pathogenic/Likely pathogenic |
Perrault syndrome 1|Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009300,MedGen:C4551721,OMIM:233400,Orphanet:2855|MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300]; Perrault syndrome|Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855|MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs1810791017
|
Likely pathogenic |
Squalene synthase deficiency [MONDO:MONDO:0032566,MedGen:C4748427,OMIM:618156] |
|
rs200217031
|
- |
- |
|
rs200908381
|
- |
- |
|
rs201022112
|
- |
- |
|
rs370245703
|
- |
- |
|
rs370433029
|
- |
- |
|
rs371623501
|
- |
- |
|
rs374810645
|
- |
- |
|
rs376669118
|
- |
- |
|
rs4731
|
LB/B |
- |
|
rs542597307
|
- |
- |
|
rs550705310
|
- |
- |
|
rs570650527
|
- |
- |
|
rs746780985
|
- |
- |
|
rs749461746
|
- |
- |
|
rs749485571
|
- |
- |
|
rs751451775
|
- |
- |
|
rs754529217
|
- |
- |
|
rs758856613
|
- |
- |
|
rs763857057
|
- |
- |
|
rs764164796
|
- |
- |
|
rs765961879
|
- |
- |
|
rs768550964
|
- |
- |
|
rs772780687
|
- |
- |
|
rs778046889
|
- |
- |
|
rs779490029
|
- |
- |
|
rs781200594
|
- |
- |
|
rs782266548
|
- |
- |
|
rs782328441
|
- |
- |
|
rs782421321
|
- |
- |
|
rs80133417
|
- |
- |
|
rs864622780
|
LP/P |
Cataract 44 (CTRCT44) [MIM:616509] |
|
rs887438250
|
- |
- |
|
rs904011
|
- |
- |
hsa00120
|
Primary bile acid biosynthesis
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
.
|
- |
- |
|
rs104886492
|
US |
HSD10 mitochondrial disease (HSD10MD) [MIM:300438] |
|
rs1049568
|
- |
- |
|
rs1057909
|
LB/B |
- |
|
rs1057910
|
LB/B |
- |
|
rs112441786
|
- |
- |
|
rs117111102
|
- |
- |
|
rs1202368985
|
- |
- |
|
rs1228918719
|
- |
- |
|
rs1228918719
|
LP/P |
Congenital bile acid synthesis defect 2 (CBAS2) [MIM:235555] |
|
rs1236669456
|
Pathogenic |
Congenital bile acid synthesis defect 2 [MONDO:MONDO:0009339,MedGen:C1856127,OMIM:235555,Orphanet:79303] |
|
rs12414460
|
- |
- |
|
rs1278639064
|
- |
- |
|
rs13222
|
Pathogenic |
46,XY disorder of sex development due to testicular 17,20-desmolase deficiency [Gene:6994,MONDO:MONDO:0013664,MedGen:C1839840,OMIM:614279,Orphanet:443087] |
|
rs1363857729
|
- |
- |
|
rs137853096
|
LP/P |
D-bifunctional protein deficiency (DBPD) [MIM:261515] |
|
rs137853101
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs137853102
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs138112316
|
- |
- |
|
rs138675307
|
- |
- |
|
rs1392361503
|
Pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs140387106
|
- |
- |
|
rs141489852
|
- |
- |
|
rs147168294
|
- |
- |
|
rs1486164573
|
- |
- |
|
rs149033118
|
- |
- |
|
rs149295644
|
- |
- |
|
rs1561442127
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs1564317029
|
- |
- |
|
rs17884712
|
- |
- |
|
rs1799853
|
LB/B |
- |
|
rs192154563
|
- |
- |
|
rs200183364
|
- |
- |
|
rs200346442
|
- |
- |
|
rs200569884
|
- |
- |
|
rs200908381
|
- |
- |
|
rs200965026
|
- |
- |
|
rs201296209
|
- |
- |
|
rs201702426
|
- |
- |
|
rs202093592
|
- |
- |
|
rs2296681
|
- |
- |
|
rs28371686
|
LB/B |
- |
|
rs368767518
|
- |
- |
|
rs370245703
|
- |
- |
|
rs375253960
|
- |
- |
|
rs41286884
|
- |
- |
|
rs4986893
|
- |
- |
|
rs543931018
|
- |
- |
|
rs545752791
|
- |
- |
|
rs550705310
|
- |
- |
|
rs556081405
|
- |
- |
|
rs56165452
|
LB/B |
- |
|
rs566644923
|
- |
- |
|
rs577954688
|
- |
- |
|
rs72552267
|
- |
- |
|
rs72558191
|
Pathogenic |
Warfarin response [MONDO:MONDO:0007390,MedGen:C0750384,OMIM:122700] |
|
rs72558192
|
- |
- |
|
rs74428123
|
- |
- |
|
rs749485571
|
- |
- |
|
rs753270728
|
- |
- |
|
rs763463911
|
- |
- |
|
rs763625282
|
- |
- |
|
rs764272389
|
- |
- |
|
rs765456449
|
- |
- |
|
rs774997677
|
- |
- |
|
rs776806726
|
- |
- |
|
rs776908257
|
- |
- |
|
rs776965057
|
- |
- |
|
rs777237591
|
- |
- |
|
rs779135938
|
Likely pathogenic |
Deficiency of 3-hydroxyacyl-CoA dehydrogenase|Hyperinsulinemic hypoglycemia|Hyperinsulinemic hypoglycemia, familial, 4 [MONDO:MONDO:0017715,MedGen:C1291230,OMIM:231530,Orphanet:309127,Orphanet:71212|Human Phenotype Ontology:HP:0000825,MONDO:MONDO:0005803,MedGen:C1864903,OMIM:PS256450,Orphanet:443095|MONDO:MONDO:0012382,MedGen:C1864948,OMIM:609975,Orphanet:71212] |
|
rs779634821
|
- |
- |
|
rs781200594
|
- |
- |
|
rs781583846
|
- |
- |
|
rs782266548
|
- |
- |
|
rs782328441
|
- |
- |
|
rs79500998
|
- |
- |
|
rs866346652
|
- |
- |
|
rs886037927
|
Likely pathogenic |
HSD10 mitochondrial disease [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295] |
|
rs889353794
|
- |
- |
hsa00130
|
Ubiquinone and other terpenoid-quinone biosynthesis
|
dbSNP |
Type |
Disease name |
|
-
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
-
|
LP/P |
Tyrosinemia 3 (TYRSN3) [MIM:276710] |
|
.
|
- |
- |
|
rs118203916
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
rs1276998235
|
Pathogenic |
Hawkinsinuria [Human Phenotype Ontology:HP:0034457,MONDO:MONDO:0007700,MedGen:C2931042,OMIM:140350,Orphanet:2118] |
|
rs137852865
|
LP/P |
Tyrosinemia 3 (TYRSN3) [MIM:276710] |
|
rs149180825
|
- |
- |
|
rs181309650
|
- |
- |
|
rs2044180572
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
rs367674632
|
Pathogenic/Likely pathogenic |
Hawkinsinuria [Human Phenotype Ontology:HP:0034457,MONDO:MONDO:0007700,MedGen:C2931042,OMIM:140350,Orphanet:2118]; Tyrosinemia type III|Tyrosinemia type III|not provided [MONDO:MONDO:0010162,MedGen:C0268623,OMIM:276710,Orphanet:69723|MONDO:MONDO:0010162,MedGen:C0268623,OMIM:276710,Orphanet:69723|MedGen:C3661900] |
|
rs761817519
|
Pathogenic/Likely pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
rs768158086
|
- |
- |
|
rs984792300
|
- |
- |
hsa00140
|
Steroid hormone biosynthesis
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Adrenal hyperplasia 5 (AH5) [MIM:202110] |
|
-
|
Likely pathogenic |
Deficiency of steroid 17-alpha-monooxygenase [MONDO:MONDO:0008730,MedGen:C0268285,OMIM:202110,Orphanet:90793] |
|
-
|
US |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
-
|
Likely pathogenic |
X-linked ichthyosis with steryl-sulfatase deficiency [MONDO:MONDO:0010622,MedGen:C0079588,OMIM:308100,Orphanet:461] |
|
-
|
Likely pathogenic |
Anterior segment dysgenesis 6 [MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
-
|
Likely pathogenic |
Anterior segment dysgenesis [Human Phenotype Ontology:HP:0007696,Human Phenotype Ontology:HP:0007699,Human Phenotype Ontology:HP:0007700,Human Phenotype Ontology:HP:0008040,MONDO:MONDO:0019503,MedGen:C1862839,OMIM:PS107250,Orphanet:88632] |
|
-
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
.
|
- |
- |
|
rs1013330593
|
- |
- |
|
rs104893628
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs104894061
|
Pathogenic |
Deficiency of steroid 11-beta-monooxygenase|not provided|Glucocorticoid-remediable aldosteronism [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795|MedGen:C3661900|MONDO:MONDO:0007080,MedGen:C3838731,OMIM:103900,Orphanet:403]; Deficiency of steroid 11-beta-monooxygenase [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795] |
|
rs104894062
|
Likely pathogenic |
Deficiency of steroid 11-beta-monooxygenase|not provided [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795|MedGen:C3661900] |
|
rs104894066
|
Pathogenic |
Deficiency of steroid 11-beta-monooxygenase [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795] |
|
rs104894068
|
Pathogenic/Likely pathogenic |
Deficiency of steroid 11-beta-monooxygenase|Glucocorticoid-remediable aldosteronism|not provided|Glucocorticoid-remediable aldosteronism [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795|MONDO:MONDO:0007080,MedGen:C3838731,OMIM:103900,Orphanet:403|MedGen:C3661900|MONDO:MONDO:0007080,MedGen:C3838731,OMIM:103900,Orphanet:403]; Deficiency of steroid 11-beta-monooxygenase [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795] |
|
rs104894135
|
LP/P |
Adrenal hyperplasia 5 (AH5) [MIM:202110] |
|
rs104894136
|
Pathogenic |
17-alpha-hydroxylase/17,20-lyase deficiency, combined partial|Breast cancer, susceptibility to|Deficiency of steroid 17-alpha-monooxygenase|not provided [MONDO:MONDO:0800380,MedGen:C4017190|MedGen:C3469522|MONDO:MONDO:0008730,MedGen:C0268285,OMIM:202110,Orphanet:90793|MedGen:C3661900] |
|
rs104894138
|
LP/P |
Adrenal hyperplasia 5 (AH5) [MIM:202110] |
|
rs104894139
|
LP/P |
Adrenal hyperplasia 5 (AH5) [MIM:202110] |
|
rs104894140
|
LP/P |
Adrenal hyperplasia 5 (AH5) [MIM:202110] |
|
rs104894142
|
LP/P |
Adrenal hyperplasia 5 (AH5) [MIM:202110] |
|
rs104894146
|
LP/P |
Adrenal hyperplasia 5 (AH5) [MIM:202110] |
|
rs104894147
|
LP/P |
Adrenal hyperplasia 5 (AH5) [MIM:202110] |
|
rs104894149
|
- |
- |
|
rs104894149
|
LP/P |
Adrenal hyperplasia 5 (AH5) [MIM:202110] |
|
rs104894150
|
- |
- |
|
rs104894153
|
LP/P |
Adrenal hyperplasia 5 (AH5) [MIM:202110] |
|
rs104894154
|
Pathogenic |
17-alpha-hydroxylase/17,20-lyase deficiency, combined complete|Deficiency of steroid 17-alpha-monooxygenase|not provided [MONDO:MONDO:0800379,MedGen:CN042980|MONDO:MONDO:0008730,MedGen:C0268285,OMIM:202110,Orphanet:90793|MedGen:C3661900] |
|
rs104894979
|
Likely pathogenic |
Glaucoma 3A|Anterior segment dysgenesis 6 [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
rs1057517829
|
LP/P |
Pseudovaginal perineoscrotal hypospadias (PPSH) [MIM:264600] |
|
rs1060499582
|
Pathogenic |
Deficiency of steroid 17-alpha-monooxygenase|not provided [MONDO:MONDO:0008730,MedGen:C0268285,OMIM:202110,Orphanet:90793|MedGen:C3661900] |
|
rs11569705
|
LB/B |
- |
|
rs1166405013
|
- |
- |
|
rs1173000590
|
Pathogenic |
not provided|Deficiency of steroid 17-alpha-monooxygenase [MedGen:C3661900|MONDO:MONDO:0008730,MedGen:C0268285,OMIM:202110,Orphanet:90793] |
|
rs1200476864
|
- |
- |
|
rs1202368985
|
- |
- |
|
rs121434244
|
LP/P |
Pseudovaginal perineoscrotal hypospadias (PPSH) [MIM:264600] |
|
rs121434245
|
LP/P |
Pseudovaginal perineoscrotal hypospadias (PPSH) [MIM:264600] |
|
rs121434246
|
LP/P |
Pseudovaginal perineoscrotal hypospadias (PPSH) [MIM:264600] |
|
rs121434249
|
LP/P |
Pseudovaginal perineoscrotal hypospadias (PPSH) [MIM:264600] |
|
rs121434250
|
LP/P |
Pseudovaginal perineoscrotal hypospadias (PPSH) [MIM:264600] |
|
rs121434251
|
LP/P |
Pseudovaginal perineoscrotal hypospadias (PPSH) [MIM:264600] |
|
rs121434252
|
LP/P |
Pseudovaginal perineoscrotal hypospadias (PPSH) [MIM:264600] |
|
rs121434253
|
LP/P |
Pseudovaginal perineoscrotal hypospadias (PPSH) [MIM:264600] |
|
rs121434534
|
LP/P |
Aromatase deficiency (AROD) [MIM:613546] |
|
rs121434536
|
LP/P |
Aromatase deficiency (AROD) [MIM:613546] |
|
rs121912978
|
LP/P |
Corticosterone methyloxidase 2 deficiency (CMO-2 deficiency) [MIM:610600] |
|
rs121912978
|
Pathogenic |
Corticosterone methyloxidase type 2 deficiency|not provided|Corticosterone methyl oxidase type II deficiency|Corticosterone 18-monooxygenase deficiency [MONDO:MONDO:0012524,MedGen:C3463917,OMIM:610600,Orphanet:427|MedGen:C3661900||MONDO:MONDO:0008751,MedGen:C0268293,OMIM:203400,Orphanet:427]; Corticosterone methyloxidase type 2 deficiency [MONDO:MONDO:0012524,MedGen:C3463917,OMIM:610600,Orphanet:427] |
|
rs1221010438
|
Pathogenic |
not provided|Deficiency of steroid 11-beta-monooxygenase [MedGen:C3661900|MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795] |
|
rs1228918719
|
- |
- |
|
rs1228918719
|
LP/P |
Congenital bile acid synthesis defect 2 (CBAS2) [MIM:235555] |
|
rs1236669456
|
Pathogenic |
Congenital bile acid synthesis defect 2 [MONDO:MONDO:0009339,MedGen:C1856127,OMIM:235555,Orphanet:79303] |
|
rs1245981952
|
- |
- |
|
rs1257727040
|
- |
- |
|
rs12721627
|
LB/B |
- |
|
rs12721629
|
LB/B |
- |
|
rs1280898306
|
- |
- |
|
rs1281169684
|
- |
- |
|
rs1309748501
|
- |
- |
|
rs1315777461
|
Likely pathogenic |
Congenital bile acid synthesis defect 2 [MONDO:MONDO:0009339,MedGen:C1856127,OMIM:235555,Orphanet:79303] |
|
rs13222
|
LP/P |
46,XY sex reversal 8 (SRXY8) [MIM:614279] |
|
rs13306279
|
- |
- |
|
rs1331249320
|
LP/P |
Pseudovaginal perineoscrotal hypospadias (PPSH) [MIM:264600] |
|
rs1347586947
|
- |
- |
|
rs1351295710
|
Likely pathogenic |
Corticosterone 18-monooxygenase deficiency|CYP11B2-related disorder|not provided [MONDO:MONDO:0008751,MedGen:C0268293,OMIM:203400,Orphanet:427||MedGen:C3661900] |
|
rs137853165
|
LP/P |
Ichthyosis, X-linked (IXL) [MIM:308100] |
|
rs137853166
|
LP/P |
Ichthyosis, X-linked (IXL) [MIM:308100] |
|
rs137853167
|
LP/P |
Ichthyosis, X-linked (IXL) [MIM:308100] |
|
rs137853168
|
LP/P |
Ichthyosis, X-linked (IXL) [MIM:308100] |
|
rs138105638
|
- |
- |
|
rs138675307
|
- |
- |
|
rs1392361503
|
Pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs139250712
|
- |
- |
|
rs1392720513
|
- |
- |
|
rs1405313151
|
- |
- |
|
rs1423560123
|
LP/P |
Adrenal hyperplasia 5 (AH5) [MIM:202110] |
|
rs142529153
|
- |
- |
|
rs1430256295
|
- |
- |
|
rs144457204
|
- |
- |
|
rs1447069098
|
Pathogenic |
not provided|Congenital adrenal hyperplasia|Deficiency of steroid 11-beta-monooxygenase [MedGen:C3661900|Human Phenotype Ontology:HP:0008258,MONDO:MONDO:0018479,MedGen:C0001627,Orphanet:418|MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795]; Glucocorticoid-remediable aldosteronism [MONDO:MONDO:0007080,MedGen:C3838731,OMIM:103900,Orphanet:403] |
|
rs145669559
|
- |
- |
|
rs145774441
|
- |
- |
|
rs146655862
|
- |
- |
|
rs147402365
|
LB/B |
- |
|
rs1477251308
|
- |
- |
|
rs148542782
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs149081683
|
- |
- |
|
rs149295644
|
- |
- |
|
rs149881706
|
Pathogenic/Likely pathogenic |
Deficiency of steroid 11-beta-monooxygenase|not provided [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795|MedGen:C3661900] |
|
rs1554652998
|
Pathogenic |
Deficiency of steroid 11-beta-monooxygenase|not provided [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795|MedGen:CN517202] |
|
rs1554652999
|
Pathogenic |
Deficiency of steroid 11-beta-monooxygenase [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795] |
|
rs1554653675
|
Pathogenic/Likely pathogenic |
Deficiency of steroid 11-beta-monooxygenase|not provided [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795|MedGen:C3661900] |
|
rs1558201263
|
- |
- |
|
rs1558603396
|
Likely pathogenic |
Glaucoma 3A|Anterior segment dysgenesis 6 [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
rs1561442127
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs1564317029
|
- |
- |
|
rs17134592
|
- |
- |
|
rs1749878115
|
Pathogenic/Likely pathogenic |
Perrault syndrome 1|Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009300,MedGen:C4551721,OMIM:233400,Orphanet:2855|MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300]; Perrault syndrome|Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855|MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs1815413655
|
LP/P |
Vitamin D-dependent rickets 3 (VDDR3) [MIM:619073] |
|
rs1816901292
|
Likely pathogenic |
not provided|Deficiency of steroid 11-beta-monooxygenase [MedGen:C3661900|MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795] |
|
rs1817612031
|
Pathogenic/Likely pathogenic |
not provided|Corticosterone 18-monooxygenase deficiency [MedGen:C3661900|MONDO:MONDO:0008751,MedGen:C0268293,OMIM:203400,Orphanet:427]; Corticosterone methyloxidase type 2 deficiency [MONDO:MONDO:0012524,MedGen:C3463917,OMIM:610600,Orphanet:427] |
|
rs181764014
|
- |
- |
|
rs182820353
|
- |
- |
|
rs182820353
|
Likely pathogenic |
Congenital bile acid synthesis defect 2 [MONDO:MONDO:0009339,MedGen:C1856127,OMIM:235555,Orphanet:79303] |
|
rs190776413
|
- |
- |
|
rs199558694
|
- |
- |
|
rs199710929
|
- |
- |
|
rs200004457
|
- |
- |
|
rs200635241
|
- |
- |
|
rs200730776
|
- |
- |
|
rs200908381
|
- |
- |
|
rs201225516
|
- |
- |
|
rs201286895
|
- |
- |
|
rs201526062
|
- |
- |
|
rs201702426
|
- |
- |
|
rs201848142
|
- |
- |
|
rs2125316074
|
Pathogenic/Likely pathogenic |
Glaucoma 3A|Primary congenital glaucoma [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|Human Phenotype Ontology:HP:0008007,MONDO:MONDO:0000365,MedGen:C1533041] |
|
rs2134082367
|
Pathogenic |
not provided|Deficiency of steroid 17-alpha-monooxygenase [MedGen:C3661900|MONDO:MONDO:0008730,MedGen:C0268285,OMIM:202110,Orphanet:90793] |
|
rs2141079375
|
Pathogenic |
not provided|Aromatase deficiency [MedGen:C3661900|MONDO:MONDO:0013301,MedGen:C1960539,OMIM:613546,Orphanet:91] |
|
rs267606755
|
Pathogenic/Likely pathogenic |
Deficiency of steroid 11-beta-monooxygenase|CYP11B1-related condition|not provided [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795||MedGen:C3661900] |
|
rs28371759
|
LB/B |
- |
|
rs28383048
|
LB/B |
- |
|
rs28383477
|
- |
- |
|
rs2854482
|
LB/B |
- |
|
rs28934586
|
Pathogenic/Likely pathogenic |
Deficiency of steroid 11-beta-monooxygenase|not provided|Glucocorticoid-remediable aldosteronism|Glucocorticoid-remediable aldosteronism [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795|MedGen:C3661900|MONDO:MONDO:0007080,MedGen:C3838731,OMIM:103900,Orphanet:403|MONDO:MONDO:0007080,MedGen:C3838731,OMIM:103900,Orphanet:403]; Deficiency of steroid 11-beta-monooxygenase [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795] |
|
rs28936701
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs28936701
|
Pathogenic |
Glaucoma 3A|not provided|Congenital glaucoma|Primary congenital glaucoma|Anterior segment dysgenesis 6 [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MedGen:C3661900|MONDO:MONDO:0020366,MedGen:C0020302|Human Phenotype Ontology:HP:0008007,MONDO:MONDO:0000365,MedGen:C1533041|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
rs3208363
|
LB/B |
- |
|
rs367634557
|
Pathogenic/Likely pathogenic |
Deficiency of steroid 11-beta-monooxygenase|not provided [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795|MedGen:C3661900] |
|
rs367833709
|
Likely pathogenic |
not provided|Deficiency of steroid 17-alpha-monooxygenase [MedGen:C3661900|MONDO:MONDO:0008730,MedGen:C0268285,OMIM:202110,Orphanet:90793] |
|
rs368386747
|
LP/P |
Pseudovaginal perineoscrotal hypospadias (PPSH) [MIM:264600] |
|
rs370245703
|
- |
- |
|
rs370433029
|
- |
- |
|
rs371825363
|
Likely pathogenic |
not provided|Deficiency of steroid 17-alpha-monooxygenase [MedGen:C3661900|MONDO:MONDO:0008730,MedGen:C0268285,OMIM:202110,Orphanet:90793] |
|
rs373611092
|
- |
- |
|
rs374810645
|
- |
- |
|
rs374926260
|
- |
- |
|
rs375833424
|
Pathogenic/Likely pathogenic |
Deficiency of steroid 11-beta-monooxygenase|not provided [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795|MedGen:C3661900] |
|
rs376074317
|
- |
- |
|
rs387906751
|
Pathogenic |
46,XY disorder of sex development due to testicular 17,20-desmolase deficiency [Gene:6994,MONDO:MONDO:0013664,MedGen:C1839840,OMIM:614279,Orphanet:443087] |
|
rs387907572
|
Pathogenic/Likely pathogenic |
Deficiency of steroid 11-beta-monooxygenase|not provided [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795|MedGen:C3661900] |
|
rs4539
|
LB/B |
- |
|
rs4986871
|
LB/B |
- |
|
rs4986910
|
LB/B |
- |
|
rs4987161
|
LB/B |
- |
|
rs5312
|
LB/B |
- |
|
rs5317
|
LB/B |
- |
|
rs550705310
|
- |
- |
|
rs551933154
|
- |
- |
|
rs55785340
|
LB/B |
- |
|
rs557905773
|
- |
- |
|
rs55901263
|
- |
- |
|
rs55951658
|
LB/B |
- |
|
rs55989760
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs55989760
|
Pathogenic/Likely pathogenic |
Glaucoma 3A|Primary congenital glaucoma|not provided|Glaucoma of childhood|Anterior segment dysgenesis 6|Congenital glaucoma|Glaucoma 3A [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|Human Phenotype Ontology:HP:0008007,MONDO:MONDO:0000365,MedGen:C1533041|MedGen:C3661900|Human Phenotype Ontology:HP:0001087,MONDO:MONDO:0020367,MedGen:C2981140,Orphanet:98977|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315|MONDO:MONDO:0020366,MedGen:C0020302|MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977]; Glaucoma 3, primary infantile, B [MONDO:MONDO:0010968,MedGen:C1832977,OMIM:600975,Orphanet:98976]; Anterior segment dysgenesis 6 [MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
rs56010818
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs56010818
|
Pathogenic/Likely pathogenic |
not provided|Anterior segment dysgenesis 6|Glaucoma 3A|Congenital glaucoma [MedGen:C3661900|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315|MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MONDO:MONDO:0020366,MedGen:C0020302] |
|
rs56324128
|
LB/B |
- |
|
rs575273220
|
- |
- |
|
rs57865060
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs61748122
|
LB/B |
- |
|
rs61748123
|
LB/B |
- |
|
rs61748126
|
LB/B |
- |
|
rs61751139
|
- |
- |
|
rs61751148
|
- |
- |
|
rs61752786
|
Likely pathogenic |
Congenital adrenal hyperplasia|Deficiency of steroid 11-beta-monooxygenase|Deficiency of steroid 11-beta-monooxygenase [Human Phenotype Ontology:HP:0008258,MONDO:MONDO:0018479,MedGen:C0001627,Orphanet:418|MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795|MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795]; Glucocorticoid-remediable aldosteronism [MONDO:MONDO:0007080,MedGen:C3838731,OMIM:103900,Orphanet:403] |
|
rs61754265
|
- |
- |
|
rs61754278
|
LP/P |
Adrenal hyperplasia 5 (AH5) [MIM:202110] |
|
rs62529832
|
- |
- |
|
rs66583685
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs67784355
|
LB/B |
- |
|
rs72549378
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs72552799
|
LB/B |
- |
|
rs747274803
|
- |
- |
|
rs749485571
|
- |
- |
|
rs749574339
|
- |
- |
|
rs750090886
|
- |
- |
|
rs750452858
|
- |
- |
|
rs752456881
|
LB/B |
- |
|
rs752540777
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of steroid 17-alpha-monooxygenase [MedGen:C3661900|MONDO:MONDO:0008730,MedGen:C0268285,OMIM:202110,Orphanet:90793] |
|
rs752811843
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of steroid 17-alpha-monooxygenase [MedGen:C3661900|MONDO:MONDO:0008730,MedGen:C0268285,OMIM:202110,Orphanet:90793] |
|
rs753774484
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of steroid 11-beta-monooxygenase|Congenital adrenal hyperplasia [MedGen:C3661900|MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795|Human Phenotype Ontology:HP:0008258,MONDO:MONDO:0018479,MedGen:C0001627,Orphanet:418] |
|
rs756271054
|
- |
- |
|
rs756817759
|
Pathogenic |
Cortisone reductase deficiency 2 [MONDO:MONDO:0013842,MedGen:C3553382,OMIM:614662,Orphanet:168588] |
|
rs756853742
|
LP/P |
Pseudovaginal perineoscrotal hypospadias (PPSH) [MIM:264600] |
|
rs757338859
|
LB/B |
- |
|
rs759118392
|
- |
- |
|
rs759183694
|
- |
- |
|
rs760329766
|
Pathogenic |
not provided|Corticosterone 18-monooxygenase deficiency [MedGen:C3661900|MONDO:MONDO:0008751,MedGen:C0268293,OMIM:203400,Orphanet:427]; Corticosterone methyloxidase type 2 deficiency|CYP11B2-related disorder [MONDO:MONDO:0012524,MedGen:C3463917,OMIM:610600,Orphanet:427|] |
|
rs760695410
|
- |
- |
|
rs760695410
|
LP/P |
Adrenal hyperplasia 5 (AH5) [MIM:202110] |
|
rs760880418
|
Pathogenic/Likely pathogenic |
Deficiency of steroid 11-beta-monooxygenase|not provided [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795|MedGen:C3661900] |
|
rs762631156
|
LB/B |
- |
|
rs763329185
|
- |
- |
|
rs763857057
|
- |
- |
|
rs764452686
|
- |
- |
|
rs764598023
|
Pathogenic/Likely pathogenic |
Deficiency of steroid 11-beta-monooxygenase|Deficiency of steroid 11-beta-monooxygenase [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795|MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795]; Glucocorticoid-remediable aldosteronism|not provided [MONDO:MONDO:0007080,MedGen:C3838731,OMIM:103900,Orphanet:403|MedGen:C3661900] |
|
rs765148467
|
- |
- |
|
rs765921219
|
Pathogenic/Likely pathogenic |
not provided|Corticosterone 18-monooxygenase deficiency [MedGen:C3661900|MONDO:MONDO:0008751,MedGen:C0268293,OMIM:203400,Orphanet:427]; Corticosterone methyloxidase type 2 deficiency [MONDO:MONDO:0012524,MedGen:C3463917,OMIM:610600,Orphanet:427] |
|
rs766107094
|
- |
- |
|
rs768550964
|
- |
- |
|
rs770247815
|
Pathogenic/Likely pathogenic |
Congenital bile acid synthesis defect 2 [MONDO:MONDO:0009339,MedGen:C1856127,OMIM:235555,Orphanet:79303] |
|
rs772283403
|
LP/P |
Pseudovaginal perineoscrotal hypospadias (PPSH) [MIM:264600] |
|
rs772780687
|
- |
- |
|
rs772897551
|
LB/B |
- |
|
rs774168721
|
- |
- |
|
rs775030275
|
LB/B |
- |
|
rs775479837
|
Pathogenic |
not provided|Congenital adrenal hyperplasia|Deficiency of steroid 11-beta-monooxygenase [MedGen:C3661900|Human Phenotype Ontology:HP:0008258,MONDO:MONDO:0018479,MedGen:C0001627,Orphanet:418|MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795] |
|
rs776567184
|
- |
- |
|
rs777638364
|
LP/P |
Adrenal hyperplasia 5 (AH5) [MIM:202110] |
|
rs777678299
|
- |
- |
|
rs779103938
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of steroid 11-beta-monooxygenase|Deficiency of steroid 11-beta-monooxygenase [MedGen:C3661900|MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795|MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795]; Glucocorticoid-remediable aldosteronism [MONDO:MONDO:0007080,MedGen:C3838731,OMIM:103900,Orphanet:403] |
|
rs779490029
|
- |
- |
|
rs779989195
|
- |
- |
|
rs780039093
|
- |
- |
|
rs781200594
|
- |
- |
|
rs782032018
|
US |
- |
|
rs782266548
|
- |
- |
|
rs782328441
|
- |
- |
|
rs782421321
|
- |
- |
|
rs782769364
|
- |
- |
|
rs78310315
|
LP/P |
Aromatase deficiency (AROD) [MIM:613546] |
|
rs80133417
|
- |
- |
|
rs866430018
|
Pathogenic |
Deficiency of steroid 11-beta-monooxygenase|not provided [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795|MedGen:C3661900] |
|
rs879802265
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of steroid 17-alpha-monooxygenase [MedGen:C3661900|MONDO:MONDO:0008730,MedGen:C0268285,OMIM:202110,Orphanet:90793] |
|
rs886041121
|
Likely pathogenic |
Congenital adrenal insuffiency with 46, XY sex reversal OR 46,XY disorder of sex development-adrenal insufficiency due to CYP11A1 deficiency [MONDO:MONDO:0013400,MedGen:C3151055,OMIM:613743,Orphanet:168558] |
|
rs887438250
|
- |
- |
|
rs894320518
|
- |
- |
|
rs9282670
|
LB/B |
- |
|
rs9282858
|
LB/B |
- |
|
rs9332963
|
LB/B |
- |
|
rs9332964
|
LP/P |
Pseudovaginal perineoscrotal hypospadias (PPSH) [MIM:264600] |
|
rs9332966
|
LB/B |
- |
|
rs9332967
|
LP/P |
Pseudovaginal perineoscrotal hypospadias (PPSH) [MIM:264600] |
|
rs9341250
|
LB/B |
- |
|
rs942376359
|
Pathogenic |
not provided|Deficiency of steroid 17-alpha-monooxygenase [MedGen:C3661900|MONDO:MONDO:0008730,MedGen:C0268285,OMIM:202110,Orphanet:90793] |
|
rs943974332
|
- |
- |
|
rs944452644
|
Likely pathogenic |
Glaucoma 3A|Anterior segment dysgenesis 6 [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
hsa00220
|
Arginine biosynthesis
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Argininemia (ARGIN) [MIM:207800] |
|
-
|
Pathogenic |
Arginase deficiency [MONDO:MONDO:0008814,MedGen:C0268548,OMIM:207800,Orphanet:90] |
|
-
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
|
-
|
Pathogenic |
Citrullinemia|Citrullinemia type I [Human Phenotype Ontology:HP:0032397,MONDO:MONDO:0015991,MedGen:C0175683,Orphanet:187|MONDO:MONDO:0008988,MedGen:C4721769,OMIM:215700,Orphanet:247525] |
|
-
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
-
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
-
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
-
|
Likely pathogenic |
Ornithine carbamoyltransferase deficiency [MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664] |
|
-
|
Likely pathogenic |
Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
.
|
- |
- |
|
rs1048119191
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs104893943
|
LP/P |
Argininemia (ARGIN) [MIM:207800] |
|
rs104893947
|
- |
- |
|
rs104893947
|
Pathogenic |
Arginase deficiency|not provided [MONDO:MONDO:0008814,MedGen:C0268548,OMIM:207800,Orphanet:90|MedGen:C3661900] |
|
rs113879010
|
Pathogenic/Likely pathogenic |
not provided|Primary hyperoxaluria, type I [MedGen:C3661900|MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs115014558
|
LB/B |
- |
|
rs1172971002
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I|Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147|MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
rs1176072053
|
- |
- |
|
rs1202306773
|
- |
- |
|
rs1202306773
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs121908521
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs121908528
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs121908529
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria|AGXT-related condition [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416|] |
|
rs121908638
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
|
rs121908645
|
Pathogenic/Likely pathogenic |
Citrullinemia type I|Citrullinemia [MONDO:MONDO:0008988,MedGen:C4721769,OMIM:215700,Orphanet:247525|Human Phenotype Ontology:HP:0032397,MONDO:MONDO:0015991,MedGen:C0175683,Orphanet:187] |
|
rs121909732
|
Pathogenic |
Hyperinsulinism-hyperammonemia syndrome [MONDO:MONDO:0011717,MedGen:C1847555,OMIM:606762,Orphanet:35878] |
|
rs121909734
|
Pathogenic |
Hyperinsulinism-hyperammonemia syndrome [MONDO:MONDO:0011717,MedGen:C1847555,OMIM:606762,Orphanet:35878] |
|
rs121912592
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs121912592
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I|Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147|MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
rs121912596
|
- |
- |
|
rs121912596
|
Pathogenic |
Congenital hyperammonemia, type I|Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147|MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
rs1242028775
|
- |
- |
|
rs1242028775
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1243598920
|
- |
- |
|
rs1245368879
|
Pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1275599086
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1280211937
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1304689724
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs1305147387
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1319489001
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1326334493
|
- |
- |
|
rs1327048960
|
Pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1337182136
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs13408961
|
LB/B |
- |
|
rs1345105436
|
- |
- |
|
rs1373919219
|
- |
- |
|
rs1392559810
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1392934477
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs140549609
|
Pathogenic/Likely pathogenic |
Arginase deficiency [MONDO:MONDO:0008814,MedGen:C0268548,OMIM:207800,Orphanet:90] |
|
rs140992177
|
LB/B |
- |
|
rs1414143303
|
- |
- |
|
rs1414143303
|
Pathogenic |
Congenital hyperammonemia, type I|Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147|MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147]; Pulmonary hypertension, neonatal, susceptibility to|Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371|MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
rs1471393474
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs149518280
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1553509297
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1553511785
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1553512642
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1553513429
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1553516442
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1553516443
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1553518389
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1558986214
|
LP/P |
Infantile cataract, skin abnormalities, glutamate excess, and impaired intellectual development (CASGID) [MIM:618339] |
|
rs1559142152
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1574586310
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1574646079
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1698686495
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1698754274
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1698933356
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1700715255
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1700881929
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1701171267
|
Pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1701172643
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1773910245
|
Likely pathogenic |
Arginase deficiency [MONDO:MONDO:0008814,MedGen:C0268548,OMIM:207800,Orphanet:90] |
|
rs180177155
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177156
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177156
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs180177157
|
- |
- |
|
rs180177157
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177161
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177162
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177163
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177173
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177182
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177186
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177191
|
- |
- |
|
rs180177191
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177195
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177197
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177198
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177199
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177202
|
Pathogenic |
Primary hyperoxaluria, type I|Primary hyperoxaluria|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416|MedGen:C3661900] |
|
rs180177203
|
Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177208
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177210
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177211
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177214
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177217
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177225
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177243
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177244
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177250
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177259
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177264
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177269
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177272
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177277
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177279
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177284
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177287
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177288
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177290
|
- |
- |
|
rs180177290
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177292
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177303
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs1845507027
|
Pathogenic/Likely pathogenic |
Citrullinemia|Citrullinemia type I [Human Phenotype Ontology:HP:0032397,MONDO:MONDO:0015991,MedGen:C0175683,Orphanet:187|MONDO:MONDO:0008988,MedGen:C4721769,OMIM:215700,Orphanet:247525] |
|
rs201023253
|
- |
- |
|
rs201071897
|
- |
- |
|
rs201623252
|
LB/B |
- |
|
rs201623252
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
|
rs202107577
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I|Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147|MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
rs202108064
|
- |
- |
|
rs2058986411
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs2068485732
|
Pathogenic |
Ornithine carbamoyltransferase deficiency [MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664] |
|
rs2068486155
|
Pathogenic |
Ornithine carbamoyltransferase deficiency [MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664] |
|
rs2068501518
|
Likely pathogenic |
Ornithine carbamoyltransferase deficiency [MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664] |
|
rs2105908864
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I|Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147|MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147]; Pulmonary hypertension, neonatal, susceptibility to|Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371|MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
rs2105922857
|
Pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs2105942900
|
Pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs2114539596
|
Pathogenic/Likely pathogenic |
Arginase deficiency [MONDO:MONDO:0008814,MedGen:C0268548,OMIM:207800,Orphanet:90] |
|
rs2124851950
|
Likely pathogenic |
Infantile cataract, skin abnormalities, glutamate excess, and impaired intellectual development [MONDO:MONDO:0032685,MedGen:C5193037,OMIM:618339] |
|
rs2133777379
|
Pathogenic |
Hyperinsulinism-hyperammonemia syndrome [MONDO:MONDO:0011717,MedGen:C1847555,OMIM:606762,Orphanet:35878] |
|
rs2147342649
|
Pathogenic |
Ornithine carbamoyltransferase deficiency [MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664] |
|
rs28940283
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs34664134
|
- |
- |
|
rs34885252
|
LB/B |
- |
|
rs369061090
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs371265106
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
|
rs372138644
|
- |
- |
|
rs372399525
|
- |
- |
|
rs373705613
|
- |
- |
|
rs4426527
|
LB/B |
- |
|
rs549085827
|
Pathogenic/Likely pathogenic |
Citrullinemia|Citrullinemia type I [Human Phenotype Ontology:HP:0032397,MONDO:MONDO:0015991,MedGen:C0175683,Orphanet:187|MONDO:MONDO:0008988,MedGen:C4721769,OMIM:215700,Orphanet:247525] |
|
rs552474817
|
- |
- |
|
rs61729604
|
- |
- |
|
rs66550389
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs66626662
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs66642398
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs66867430
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs67156896
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs67284661
|
Likely pathogenic |
not provided|Ornithine carbamoyltransferase deficiency [MedGen:C3661900|MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664] |
|
rs67418243
|
Pathogenic |
not provided|Ornithine carbamoyltransferase deficiency [MedGen:C3661900|MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664] |
|
rs67468335
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs67501347
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs67870244
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs67960011
|
Pathogenic |
Ornithine carbamoyltransferase deficiency|not provided [MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664|MedGen:C3661900] |
|
rs67993095
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs68026851
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72554331
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72554332
|
Pathogenic |
not provided|Ornithine carbamoyltransferase deficiency [MedGen:C3661900|MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664] |
|
rs72554339
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72554342
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72554344
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72556254
|
Pathogenic |
Ornithine carbamoyltransferase deficiency [MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664] |
|
rs72556257
|
Pathogenic |
not provided|Ornithine carbamoyltransferase deficiency [MedGen:CN517202|MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664] |
|
rs72556272
|
Likely pathogenic |
Ornithine carbamoyltransferase deficiency [MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664] |
|
rs72556274
|
Likely pathogenic |
Ornithine carbamoyltransferase deficiency [MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664] |
|
rs72556276
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72556300
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72558403
|
Pathogenic |
Ornithine carbamoyltransferase deficiency [MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664] |
|
rs72558404
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72558406
|
Pathogenic/Likely pathogenic |
not provided|Ornithine carbamoyltransferase deficiency [MedGen:C3661900|MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664] |
|
rs72558407
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72558442
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72558443
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72558444
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72558448
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72558449
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72558450
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72558463
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72558464
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72558465
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72558478
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs73106685
|
LB/B |
- |
|
rs74205173
|
- |
- |
|
rs745404241
|
Pathogenic/Likely pathogenic |
Citrullinemia type I|Citrullinemia [MONDO:MONDO:0008988,MedGen:C4721769,OMIM:215700,Orphanet:247525|Human Phenotype Ontology:HP:0032397,MONDO:MONDO:0015991,MedGen:C0175683,Orphanet:187] |
|
rs747624770
|
Pathogenic/Likely pathogenic |
Congenital microcephaly - severe encephalopathy - progressive cerebral atrophy syndrome|not provided [MONDO:MONDO:0014258,MedGen:C3809971,OMIM:615574,Orphanet:391376|MedGen:C3661900] |
|
rs749093544
|
- |
- |
|
rs749568989
|
- |
- |
|
rs750670270
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs750905647
|
- |
- |
|
rs752339705
|
- |
- |
|
rs752339705
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs754259099
|
Likely pathogenic |
Arginase deficiency [MONDO:MONDO:0008814,MedGen:C0268548,OMIM:207800,Orphanet:90] |
|
rs756337473
|
- |
- |
|
rs756337473
|
Pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs756437332
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs757205958
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs759201450
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs759836341
|
- |
- |
|
rs762387914
|
- |
- |
|
rs762387914
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
|
rs763887405
|
- |
- |
|
rs765196603
|
- |
- |
|
rs765910470
|
- |
- |
|
rs767377977
|
- |
- |
|
rs768215008
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
|
rs769018733
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
|
rs769085115
|
- |
- |
|
rs770910923
|
Likely pathogenic |
Ornithine carbamoyltransferase deficiency [MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664] |
|
rs770944877
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
|
rs771385956
|
- |
- |
|
rs771794639
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
|
rs775163147
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
|
rs775305020
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
|
rs777233486
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs777828000
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
|
rs779013628
|
- |
- |
|
rs779259590
|
- |
- |
|
rs796052057
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052060
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052061
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs796052062
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052063
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052064
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs796052065
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs80358214
|
LP/P |
Congenital systemic glutamine deficiency (CSGD) [MIM:610015] |
|
rs886042831
|
Pathogenic |
not provided|Hyperammonemia, type III [MedGen:C3661900|MONDO:MONDO:0009377,MedGen:C0268543,OMIM:237310,Orphanet:927] |
|
rs933813349
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs933813349
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I|Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147|MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
rs936192871
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
hsa00230
|
Purine metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-negative, NK cell-negative, due to adenosine deaminase deficiency [MONDO:MONDO:0007064,MedGen:C1863236,OMIM:102700,Orphanet:277] |
|
-
|
Likely pathogenic |
Pseudohypoparathyroidism type I A [MONDO:MONDO:0007078,MedGen:C3494506,OMIM:103580,Orphanet:79443] |
|
-
|
Likely pathogenic |
Dystonia 12 [MONDO:MONDO:0007496,MedGen:C1868681,OMIM:128235,Orphanet:71517] |
|
-
|
LP/P |
Microcephaly with or without chorioretinopathy, lymphedema, or impaired intellectual development (MCLMR) [MIM:152950] |
|
-
|
Pathogenic |
not provided|Microcephaly with or without chorioretinopathy, lymphedema, or intellectual disability [MedGen:C3661900|MONDO:MONDO:0007918,MedGen:C1835265,OMIM:152950,Orphanet:2526] |
|
-
|
Pathogenic |
Visceral myopathy 1 [MONDO:MONDO:0020754,MedGen:C5542197,OMIM:155310,Orphanet:2604] |
|
-
|
Pathogenic |
Actin accumulation myopathy [MONDO:MONDO:0008070,MedGen:C3711389,OMIM:161800,Orphanet:98904] |
|
-
|
Pathogenic |
Familial multiple nevi flammei [MONDO:MONDO:0008094,MedGen:C2931029,OMIM:163000,Orphanet:624] |
|
-
|
LP/P |
Optic atrophy 1 (OPA1) [MIM:165500] |
|
-
|
US |
Inclusion body myopathy with early-onset Paget disease with or without frontotemporal dementia 1 (IBMPFD1) [MIM:167320] |
|
-
|
Likely pathogenic |
Retinitis pigmentosa 10 [MONDO:MONDO:0008379,MedGen:C1867299,OMIM:180105,Orphanet:791] |
|
-
|
LP/P |
Costello syndrome (CSTLO) [MIM:218040] |
|
-
|
Likely pathogenic |
Cystic fibrosis [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586] |
|
-
|
Likely pathogenic |
Baraitser-Winter syndrome 1 [MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995]; Developmental malformations-deafness-dystonia syndrome [MONDO:MONDO:0011823,MedGen:C1846331,OMIM:607371,Orphanet:79107] |
|
-
|
LP/P |
Lesch-Nyhan syndrome (LNS) [MIM:300322] |
|
-
|
Pathogenic |
Lesch-Nyhan syndrome [MONDO:MONDO:0010298,MedGen:C0023374,OMIM:300322,Orphanet:510]; Partial hypoxanthine-guanine phosphoribosyltransferase deficiency [MONDO:MONDO:0010299,MedGen:C0268117,OMIM:300323,Orphanet:79233] |
|
-
|
LP/P |
Hyperuricemia, HPRT-related (HRH) [MIM:300323] |
|
-
|
LP/P |
Intellectual developmental disorder, X-linked, syndromic, Snijders Blok type (MRXSSB) [MIM:300958] |
|
-
|
Likely pathogenic |
Intellectual disability, X-linked 102 [MONDO:MONDO:0010497,MedGen:C5393299,OMIM:300958,Orphanet:457260] |
|
-
|
Pathogenic |
Brody myopathy [MONDO:MONDO:0010977,MedGen:C1832918,OMIM:601003,Orphanet:53347] |
|
-
|
LP/P |
Noonan syndrome 3 (NS3) [MIM:609942] |
|
-
|
Likely pathogenic |
Noonan syndrome 3 [MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648] |
|
-
|
LP/P |
Retinitis pigmentosa 33 (RP33) [MIM:610359] |
|
-
|
Pathogenic |
Aortic aneurysm, familial thoracic 6 [MONDO:MONDO:0012730,MedGen:C2673186,OMIM:611788] |
|
-
|
Pathogenic |
Hypomyelinating leukodystrophy 6 [MONDO:MONDO:0012905,MedGen:C2676244,OMIM:612438,Orphanet:139441] |
|
-
|
US |
Spastic paraplegia 45, autosomal recessive (SPG45) [MIM:613162] |
|
-
|
Likely pathogenic |
Purine-nucleoside phosphorylase deficiency [MONDO:MONDO:0013171,MedGen:C0268125,OMIM:613179,Orphanet:760] |
|
-
|
Likely pathogenic |
Adenosine kinase deficiency [MONDO:MONDO:0100255,MedGen:C4706555,OMIM:614300,Orphanet:289290,Orphanet:88616] |
|
-
|
Likely pathogenic |
Encephalopathy, lethal, due to defective mitochondrial peroxisomal fission 1 [MONDO:MONDO:0013726,MedGen:C3280660,OMIM:614388,Orphanet:330050] |
|
-
|
Likely pathogenic |
Complex cortical dysplasia with other brain malformations 4 [MONDO:MONDO:0014171,MedGen:C3809420,OMIM:615412] |
|
-
|
Likely pathogenic |
Developmental and epileptic encephalopathy, 31 [MONDO:MONDO:0014598,MedGen:C4225357,OMIM:616346,Orphanet:2382] |
|
-
|
Likely pathogenic |
Childhood Onset VCP-related Neurodevelopmental Disorder|Charcot-Marie-Tooth disease type 2Y [|MONDO:MONDO:0014735,MedGen:C5569026,OMIM:616687,Orphanet:435387]; Inclusion body myopathy with Paget disease of bone and frontotemporal dementia type 1 [MONDO:MONDO:0008178,MedGen:C4551951,OMIM:167320]; Frontotemporal dementia and/or amyotrophic lateral sclerosis 6 [MONDO:MONDO:0013501,MedGen:C5436279,OMIM:613954,Orphanet:275872,Orphanet:803] |
|
-
|
Pathogenic |
Intellectual disability, autosomal dominant 48 [MONDO:MONDO:0030913,MedGen:C4540321,OMIM:617751,Orphanet:500159] |
|
-
|
LP/P |
Noonan syndrome 11 (NS11) [MIM:618499] |
|
-
|
Likely pathogenic |
Neurodevelopmental disorder with structural brain anomalies and dysmorphic facies [MONDO:MONDO:0032820,MedGen:C5231416,OMIM:618577] |
|
-
|
Likely pathogenic |
Intellectual developmental disorder with or without peripheral neuropathy [MONDO:MONDO:0859240,MedGen:C5676969,OMIM:619844] |
|
-
|
LP/P |
Neurodevelopmental disorder with hypotonia, impaired speech, and behavioral abnormalities (NEDHISB) [MIM:619854] |
|
-
|
Likely pathogenic |
Neurodevelopmental disorder with hypotonia, impaired speech, and behavioral abnormalities [MONDO:MONDO:0859243,MedGen:C5676975,OMIM:619854] |
|
-
|
Pathogenic |
Mitochondrial complex V (ATP synthase) deficiency, nuclear type 4A [MONDO:MONDO:0957254,MedGen:C5830480,OMIM:620358] |
|
-
|
Likely pathogenic |
Congenital myopathy [MONDO:MONDO:0019952,MedGen:C0270960,OMIM:PS117000,Orphanet:97245] |
|
-
|
Pathogenic |
Familial hemiplegic migraine [MONDO:MONDO:0000700,MedGen:C0338484,OMIM:PS141500] |
|
-
|
Likely pathogenic |
Anemia|Noonan syndrome [Human Phenotype Ontology:HP:0001903,Human Phenotype Ontology:HP:0001926,Human Phenotype Ontology:HP:0003136,Human Phenotype Ontology:HP:0005509,MONDO:MONDO:0002280,MedGen:C0002871|MONDO:MONDO:0018997,MeSH:D009634,MedGen:C0028326,OMIM:PS163950,Orphanet:648] |
|
.
|
- |
- |
|
rs1000091588
|
Pathogenic |
Autosomal recessive distal spinal muscular atrophy 1|Charcot-Marie-Tooth disease|Distal spinal muscular atrophy|Autosomal recessive distal spinal muscular atrophy 1 [MONDO:MONDO:0011436,MedGen:C1858517,OMIM:604320,Orphanet:98920|MONDO:MONDO:0015626,MedGen:C0007959,OMIM:PS118220,Orphanet:166|MONDO:MONDO:0018894,MedGen:C0393541,Orphanet:53739|MONDO:MONDO:0011436,MedGen:C1858517,OMIM:604320,Orphanet:98920]; Charcot-Marie-Tooth disease axonal type 2S [MONDO:MONDO:0014511,MedGen:C4015349,OMIM:616155,Orphanet:443073] |
|
rs1000661676
|
- |
- |
|
rs1035500320
|
- |
- |
|
rs1035500320
|
Likely pathogenic |
Adenylosuccinate lyase deficiency [MONDO:MONDO:0007068,MedGen:C0268126,OMIM:103050,Orphanet:46] |
|
rs1036185928
|
Pathogenic |
not provided|Adenylosuccinate lyase deficiency [MedGen:C3661900|MONDO:MONDO:0007068,MedGen:C0268126,OMIM:103050,Orphanet:46] |
|
rs1046009538
|
- |
- |
|
rs104893631
|
LP/P |
Mitochondrial DNA depletion syndrome 3 (MTDPS3) [MIM:251880] |
|
rs104893632
|
LP/P |
Mitochondrial DNA depletion syndrome 3 (MTDPS3) [MIM:251880] |
|
rs104893633
|
Pathogenic |
Mitochondrial DNA depletion syndrome 3 (hepatocerebral type) [MONDO:MONDO:0009636,MedGen:C5191055,OMIM:251880,Orphanet:279934] |
|
rs104894003
|
Pathogenic |
Developmental malformations-deafness-dystonia syndrome|Baraitser-Winter syndrome 1|Inborn genetic diseases|not provided|ACTB-related BAFopathy [MONDO:MONDO:0011823,MedGen:C1846331,OMIM:607371,Orphanet:79107|MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995|MeSH:D030342,MedGen:C0950123|MedGen:C3661900|] |
|
rs104894028
|
Pathogenic |
Hemolytic anemia due to pyrimidine 5' nucleotidase deficiency [MONDO:MONDO:0009946,MedGen:C1849507,OMIM:266120,Orphanet:35120] |
|
rs104894226
|
LP/P |
Costello syndrome (CSTLO) [MIM:218040] |
|
rs104894226
|
Pathogenic |
Costello syndrome|not provided|Neoplasm of the large intestine|RASopathy|Non-immune hydrops fetalis|Noonan syndrome and Noonan-related syndrome|6 conditions|HRAS-related condition [MONDO:MONDO:0009026,MedGen:C0587248,OMIM:218040,Orphanet:3071|MedGen:C3661900|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391|Human Phenotype Ontology:HP:0001790,MONDO:MONDO:0009369,MedGen:C0455988,OMIM:236750,Orphanet:363999|MONDO:MONDO:0020297,MedGen:C5681679,Orphanet:98733|6 conditions|] |
|
rs104894226
|
Pathogenic |
not provided|Acute myeloid leukemia|Lung adenocarcinoma|Pancreatic adenocarcinoma|Neoplasm of the large intestine|Multiple myeloma|Transitional cell carcinoma of the bladder|Neoplasm of uterine cervix|B-cell chronic lymphocytic leukemia|Hepatocellular carcinoma|Squamous cell lung carcinoma|Squamous cell carcinoma of the skin|Squamous cell carcinoma of the head and neck|Thymoma|Breast neoplasm|Costello syndrome|Gastric adenocarcinoma|Malignant melanoma of skin|Malignant neoplasm of body of uterus|KA-like vemurafenib-induced squamous lesions|Lip and oral cavity carcinoma [MedGen:C3661900|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0100522,MONDO:MONDO:0006456,MeSH:D013945,MedGen:C0040100,Orphanet:99867|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0009026,MedGen:C0587248,OMIM:218040,Orphanet:3071|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MedGen:C0153574||MONDO:MONDO:0023644,MedGen:C0220641] |
|
rs104894227
|
LP/P |
Costello syndrome (CSTLO) [MIM:218040] |
|
rs104894228
|
LP/P |
Schimmelpenning-Feuerstein-Mims syndrome (SFM) [MIM:163200] |
|
rs104894228
|
Pathogenic/Likely pathogenic |
Linear nevus sebaceous syndrome|Nevus sebaceous|NEVUS SPILUS, SOMATIC|Epidermal nevus|Squamous cell lung carcinoma|Hepatocellular carcinoma|Squamous cell carcinoma of the skin|Lung adenocarcinoma|Neoplasm of uterine cervix|SPITZ NEVUS, SOMATIC|Malignant neoplasm of body of uterus|Pancreatic adenocarcinoma|Malignant melanoma of skin|Gastric adenocarcinoma|Transitional cell carcinoma of the bladder|Squamous cell carcinoma of the head and neck|Multiple myeloma|Thyroid tumor|B-cell chronic lymphocytic leukemia|Neoplasm of the large intestine|Breast neoplasm|Acute myeloid leukemia|Lip and oral cavity carcinoma|Non-immune hydrops fetalis|Costello syndrome|Noonan syndrome and Noonan-related syndrome|Epidermolytic nevus|cutaneous-skeletal hypophosphatemia syndrome [Human Phenotype Ontology:HP:0010817,MONDO:MONDO:0008097,MedGen:C4552097,OMIM:163200,Orphanet:2612|Human Phenotype Ontology:HP:0010815,MedGen:C3854181||Human Phenotype Ontology:HP:0010816,MONDO:MONDO:0008093,MedGen:C0334082,OMIM:162900,Orphanet:79414|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873||MedGen:C0153574|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|MONDO:MONDO:0023644,MedGen:C0220641|Human Phenotype Ontology:HP:0001790,MONDO:MONDO:0009369,MedGen:C0455988,OMIM:236750,Orphanet:363999|MONDO:MONDO:0009026,MedGen:C0587248,OMIM:218040,Orphanet:3071|MONDO:MONDO:0020297,MedGen:C5681679,Orphanet:98733|MONDO:MONDO:0044656,MedGen:C1302848,Orphanet:497737|] |
|
rs104894228
|
LP/P |
Costello syndrome (CSTLO) [MIM:218040] |
|
rs104894228
|
Pathogenic |
Costello syndrome|RASopathy|not provided|Lung adenocarcinoma|Multiple myeloma|Thyroid tumor|Breast neoplasm|Squamous cell lung carcinoma|Pancreatic adenocarcinoma|B-cell chronic lymphocytic leukemia|Transitional cell carcinoma of the bladder|Squamous cell carcinoma of the head and neck|Malignant neoplasm of body of uterus|Malignant melanoma of skin|Squamous cell carcinoma of the skin|Acute myeloid leukemia|Neoplasm of the large intestine|Neoplasm of uterine cervix|Gastric adenocarcinoma|Neoplasm|Hepatocellular carcinoma|Noonan syndrome|6 conditions|Noonan syndrome and Noonan-related syndrome|HRAS-related condition [MONDO:MONDO:0009026,MedGen:C0587248,OMIM:218040,Orphanet:3071|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391|MedGen:C3661900|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MedGen:C0153574|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0002664,Human Phenotype Ontology:HP:0003008,Human Phenotype Ontology:HP:0006741,MONDO:MONDO:0005070,MeSH:D009369,MedGen:C0027651|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MONDO:MONDO:0018997,MeSH:D009634,MedGen:C0028326,OMIM:PS163950,Orphanet:648|6 conditions|MONDO:MONDO:0020297,MedGen:C5681679,Orphanet:98733|] |
|
rs104894229
|
LP/P |
Congenital myopathy with excess of muscle spindles (CMEMS) [MIM:218040] |
|
rs104894229
|
Pathogenic |
Costello syndrome|Myopathy, congenital, with excess of muscle spindles|Epidermal nevus with urothelial cancer, somatic|Nevus sebaceous|not provided|RASopathy|Nasopharyngeal neoplasm|Uterine carcinosarcoma|Malignant neoplasm of body of uterus|Malignant melanoma of skin|Lung adenocarcinoma|Pancreatic adenocarcinoma|Acute myeloid leukemia|Breast neoplasm|Thyroid tumor|Gastric adenocarcinoma|Neoplasm of uterine cervix|Squamous cell carcinoma of the head and neck|Transitional cell carcinoma of the bladder|Prostate adenocarcinoma|Ovarian serous cystadenocarcinoma|Papillary renal cell carcinoma, sporadic|Squamous cell carcinoma of the skin|Myelodysplastic syndrome|Adenoid cystic carcinoma|Glioblastoma|Carcinoma of esophagus|Multiple myeloma|Hepatocellular carcinoma|Neoplasm of the large intestine|Wooly hair nevus|Rhabdomyosarcoma|Lip and oral cavity carcinoma|Inborn genetic diseases|Noonan syndrome and Noonan-related syndrome|Cardiovascular phenotype|See cases|HRAS-related condition|Noonan syndrome 1|Epidermal nevus [MONDO:MONDO:0009026,MedGen:C0587248,OMIM:218040,Orphanet:3071|MONDO:MONDO:0800299,MedGen:C1968782|MedGen:C3277679|Human Phenotype Ontology:HP:0010815,MedGen:C3854181|MedGen:C3661900|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391|Human Phenotype Ontology:HP:0100630,MONDO:MONDO:0005375,MeSH:D009303,MedGen:C0027439|MONDO:MONDO:0006485,MedGen:C0280630|MedGen:C0153574|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0005082,MedGen:C0007112|MONDO:MONDO:0006046,MedGen:C0279663|MeSH:C538614,MedGen:C1336078|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|MONDO:MONDO:0004971,MeSH:D003528,MedGen:C0010606|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0019311,MedGen:C0343114,Orphanet:79414|Human Phenotype Ontology:HP:0002859,MONDO:MONDO:0005212,MeSH:D012208,MedGen:C0035412,Orphanet:780|MONDO:MONDO:0023644,MedGen:C0220641|MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0020297,MedGen:C5681679,Orphanet:98733|MedGen:CN230736|||MONDO:MONDO:0008104,MedGen:C4551602,OMIM:163950,Orphanet:648|Human Phenotype Ontology:HP:0010816,MONDO:MONDO:0008093,MedGen:C0334082,OMIM:162900,Orphanet:79414] |
|
rs104894230
|
US |
Bladder carcinoma |
|
rs104894230
|
Pathogenic |
Malignant tumor of urinary bladder|Costello syndrome|Myopathy, congenital, with excess of muscle spindles|Epidermal nevus|not provided|Melanoma|Thyroid tumor|Inborn genetic diseases|HRAS-related condition [MONDO:MONDO:0001187,MedGen:C0005684,OMIM:109800,Orphanet:157980|MONDO:MONDO:0009026,MedGen:C0587248,OMIM:218040,Orphanet:3071|MONDO:MONDO:0800299,MedGen:C1968782|Human Phenotype Ontology:HP:0010816,MONDO:MONDO:0008093,MedGen:C0334082,OMIM:162900,Orphanet:79414|MedGen:C3661900|Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|MeSH:D030342,MedGen:C0950123|] |
|
rs104894230
|
LP/P |
Costello syndrome (CSTLO) [MIM:218040] |
|
rs104894230
|
Pathogenic |
Costello syndrome|not provided|Adenoid cystic carcinoma|Neoplasm of the large intestine|Carcinoma of esophagus|Thyroid tumor|Uterine carcinosarcoma|Papillary renal cell carcinoma, sporadic|Prostate adenocarcinoma|Malignant melanoma of skin|Squamous cell carcinoma of the head and neck|Squamous cell carcinoma of the skin|Breast neoplasm|Acute myeloid leukemia|Malignant neoplasm of body of uterus|Ovarian serous cystadenocarcinoma|Glioblastoma|Transitional cell carcinoma of the bladder|Gastric adenocarcinoma|Neoplasm of uterine cervix|Myelodysplastic syndrome|Nasopharyngeal neoplasm|Multiple myeloma|Lung adenocarcinoma|Hepatocellular carcinoma|Pancreatic adenocarcinoma|Inborn genetic diseases|6 conditions|Rhabdomyosarcoma|Noonan syndrome and Noonan-related syndrome [MONDO:MONDO:0009026,MedGen:C0587248,OMIM:218040,Orphanet:3071|MedGen:C3661900|MONDO:MONDO:0004971,MeSH:D003528,MedGen:C0010606|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|MONDO:MONDO:0006485,MedGen:C0280630|MeSH:C538614,MedGen:C1336078|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|MedGen:C0153574|MONDO:MONDO:0006046,MedGen:C0279663|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0100630,MONDO:MONDO:0005375,MeSH:D009303,MedGen:C0027439|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|MeSH:D030342,MedGen:C0950123|6 conditions|Human Phenotype Ontology:HP:0002859,MONDO:MONDO:0005212,MeSH:D012208,MedGen:C0035412,Orphanet:780|MONDO:MONDO:0020297,MedGen:C5681679,Orphanet:98733] |
|
rs104894230
|
Pathogenic/Likely pathogenic |
Costello syndrome, severe|Nevus sebaceous|Costello syndrome|RASopathy|not provided|Breast neoplasm|Lip and oral cavity carcinoma|Non-immune hydrops fetalis|Noonan syndrome and Noonan-related syndrome [MedGen:C4016398|Human Phenotype Ontology:HP:0010815,MedGen:C3854181|MONDO:MONDO:0009026,MedGen:C0587248,OMIM:218040,Orphanet:3071|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391|MedGen:C3661900|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0023644,MedGen:C0220641|Human Phenotype Ontology:HP:0001790,MONDO:MONDO:0009369,MedGen:C0455988,OMIM:236750,Orphanet:363999|MONDO:MONDO:0020297,MedGen:C5681679,Orphanet:98733] |
|
rs104894231
|
LP/P |
Costello syndrome (CSTLO) [MIM:218040] |
|
rs104894231
|
Pathogenic/Likely pathogenic |
Costello syndrome|Multiple myeloma|Neoplasm of the large intestine|Gastric adenocarcinoma|Acute myeloid leukemia|Neoplasm of uterine cervix|Lung adenocarcinoma [MONDO:MONDO:0009026,MedGen:C0587248,OMIM:218040,Orphanet:3071|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013] |
|
rs104894359
|
LP/P |
Noonan syndrome 3 (NS3) [MIM:609942] |
|
rs104894359
|
LP/P |
Cardiofaciocutaneous syndrome 2 (CFC2) [MIM:615278] |
|
rs104894359
|
Pathogenic |
Cardiofaciocutaneous syndrome 2|RASopathy|not provided|Cardio-facio-cutaneous syndrome|Cardio-facio-cutaneous syndrome [MONDO:MONDO:0014112,MedGen:C3809005,OMIM:615278,Orphanet:1340|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391|MedGen:C3661900|MONDO:MONDO:0015280,MedGen:C1275081,OMIM:PS115150,Orphanet:1340|MONDO:MONDO:0015280,MedGen:C1275081,OMIM:PS115150,Orphanet:1340]; Noonan syndrome|Inborn genetic diseases|Noonan syndrome 3 [MONDO:MONDO:0018997,MeSH:D009634,MedGen:C0028326,OMIM:PS163950,Orphanet:648|MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648] |
|
rs104894364
|
LP/P |
Noonan syndrome 3 (NS3) [MIM:609942] |
|
rs104894364
|
Pathogenic |
Noonan syndrome 3|not provided|Noonan syndrome|RASopathy [MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648|MedGen:C3661900|MONDO:MONDO:0018997,MeSH:D009634,MedGen:C0028326,OMIM:PS163950,Orphanet:648|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391] |
|
rs104894365
|
LP/P |
Noonan syndrome 3 (NS3) [MIM:609942] |
|
rs104894365
|
Pathogenic |
Noonan syndrome 3|Endometrial carcinoma|RASopathy|not provided|Noonan syndrome|Noonan syndrome [MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648|Human Phenotype Ontology:HP:0012114,MONDO:MONDO:0002447,MedGen:C0476089,OMIM:608089|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391|MedGen:C3661900|MONDO:MONDO:0018997,MeSH:D009634,MedGen:C0028326,OMIM:PS163950,Orphanet:648|MONDO:MONDO:0018997,MeSH:D009634,MedGen:C0028326,OMIM:PS163950,Orphanet:648]; Cardio-facio-cutaneous syndrome|Inborn genetic diseases|Noonan syndrome and Noonan-related syndrome [MONDO:MONDO:0015280,MedGen:C1275081,OMIM:PS115150,Orphanet:1340|MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0020297,MedGen:C5681679,Orphanet:98733] |
|
rs104894366
|
LP/P |
Noonan syndrome 3 (NS3) [MIM:609942] |
|
rs104894366
|
LP/P |
Cardiofaciocutaneous syndrome 2 (CFC2) [MIM:615278] |
|
rs104894366
|
Pathogenic/Likely pathogenic |
Cardiofaciocutaneous syndrome 2|Cardio-facio-cutaneous syndrome [MONDO:MONDO:0014112,MedGen:C3809005,OMIM:615278,Orphanet:1340|MONDO:MONDO:0015280,MedGen:C1275081,OMIM:PS115150,Orphanet:1340]; Noonan syndrome|not provided|Acute myeloid leukemia [MONDO:MONDO:0018997,MeSH:D009634,MedGen:C0028326,OMIM:PS163950,Orphanet:648|MedGen:C3661900|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519]; Noonan syndrome 3 [MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648]; Cardiofaciocutaneous syndrome 2 [MONDO:MONDO:0014112,MedGen:C3809005,OMIM:615278,Orphanet:1340]; Autoimmune lymphoproliferative syndrome type 4|RASopathy [MONDO:MONDO:0013767,MedGen:C2674723,OMIM:614470,Orphanet:268114|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391] |
|
rs104894366
|
Pathogenic |
Noonan syndrome|RASopathy|not provided|Noonan syndrome 3|Noonan syndrome 1 [MONDO:MONDO:0018997,MeSH:D009634,MedGen:C0028326,OMIM:PS163950,Orphanet:648|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391|MedGen:C3661900|MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648|MONDO:MONDO:0008104,MedGen:C4551602,OMIM:163950,Orphanet:648] |
|
rs104894367
|
Pathogenic |
Noonan syndrome 3 [MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648] |
|
rs104894451
|
LP/P |
Purine nucleoside phosphorylase deficiency (PNPD) [MIM:613179] |
|
rs104894452
|
LP/P |
Purine nucleoside phosphorylase deficiency (PNPD) [MIM:613179] |
|
rs104894506
|
LP/P |
Adenine phosphoribosyltransferase deficiency (APRTD) [MIM:614723] |
|
rs104894508
|
LP/P |
Adenine phosphoribosyltransferase deficiency (APRTD) [MIM:614723] |
|
rs1057518071
|
Pathogenic |
Baraitser-Winter syndrome 1|not provided [MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995|MedGen:C3661900] |
|
rs1057518493
|
Likely pathogenic |
Actin accumulation myopathy [MONDO:MONDO:0008070,MedGen:C3711389,OMIM:161800,Orphanet:98904] |
|
rs1057519430
|
LP/P |
Intellectual developmental disorder, X-linked, syndromic, Snijders Blok type (MRXSSB) [MIM:300958] |
|
rs1057519725
|
LP/P |
Oculoectodermal syndrome (OES) [MIM:600268] |
|
rs1057519742
|
Pathogenic/Likely pathogenic |
Melanoma|Uveal melanoma [Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202|Human Phenotype Ontology:HP:0007716,MONDO:MONDO:0006486,MeSH:C536494,MedGen:C0220633,OMIM:155720,Orphanet:39044] |
|
rs1057519874
|
Likely pathogenic |
Malignant neoplasm of body of uterus|Squamous cell carcinoma of the head and neck|Melanoma|Malignant melanoma of skin|Squamous cell carcinoma of the skin [MedGen:C0153574|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723] |
|
rs1057519948
|
Likely pathogenic |
Malignant neoplasm of body of uterus|Squamous cell carcinoma of the skin|Squamous cell carcinoma of the head and neck|Malignant melanoma of skin [MedGen:C0153574|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779] |
|
rs1057519951
|
Likely pathogenic |
Breast neoplasm|Lung adenocarcinoma|Gastric adenocarcinoma|Squamous cell carcinoma of the head and neck [Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037] |
|
rs1064793444
|
Pathogenic/Likely pathogenic |
not provided|ACTB-related BAFopathy|Baraitser-Winter syndrome 1 [MedGen:CN517202||MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995] |
|
rs1064794287
|
Pathogenic/Likely pathogenic |
not provided|Actin accumulation myopathy [MedGen:C3661900|MONDO:MONDO:0008070,MedGen:C3711389,OMIM:161800,Orphanet:98904] |
|
rs1064794574
|
LP/P |
Intellectual developmental disorder, X-linked, syndromic, Snijders Blok type (MRXSSB) [MIM:300958] |
|
rs1064794652
|
Pathogenic/Likely pathogenic |
not provided|Actin accumulation myopathy [MedGen:C3661900|MONDO:MONDO:0008070,MedGen:C3711389,OMIM:161800,Orphanet:98904] |
|
rs1064794680
|
- |
- |
|
rs1064795334
|
Pathogenic/Likely pathogenic |
not provided|Complex cortical dysplasia with other brain malformations 5 [MedGen:C3661900|MONDO:MONDO:0014337,MedGen:C3810407,OMIM:615763] |
|
rs1064796820
|
Pathogenic |
not provided|Intellectual disability, X-linked 102 [MedGen:CN517202|MONDO:MONDO:0010497,MedGen:C5393299,OMIM:300958,Orphanet:457260] |
|
rs1064796827
|
Pathogenic/Likely pathogenic |
not provided|Intellectual disability, X-linked 102 [MedGen:C3661900|MONDO:MONDO:0010497,MedGen:C5393299,OMIM:300958,Orphanet:457260] |
|
rs112445441
|
LP/P |
Oculoectodermal syndrome (OES) [MIM:600268] |
|
rs1131691341
|
Likely pathogenic |
not provided|Baraitser-Winter syndrome 1 [MedGen:CN517202|MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995] |
|
rs1131691696
|
Pathogenic/Likely pathogenic |
not provided|Hypomyelinating leukodystrophy 6|Hypomyelinating leukodystrophy 6 [MedGen:C3661900|MONDO:MONDO:0012905,MedGen:C2676244,OMIM:612438,Orphanet:139441|MONDO:MONDO:0012905,MedGen:C2676244,OMIM:612438,Orphanet:139441]; Torsion dystonia 4 [MONDO:MONDO:0007493,MedGen:C1851943,OMIM:128101,Orphanet:98805] |
|
rs1131691895
|
Pathogenic/Likely pathogenic |
not provided|Complex cortical dysplasia with other brain malformations 1|Brain malformation [MedGen:C3661900|MONDO:MONDO:0013541,MedGen:C3808397,OMIM:614039,Orphanet:300570|MedGen:C0266449,Orphanet:199633]; Congenital fibrosis of extraocular muscles [Human Phenotype Ontology:HP:0001491,MONDO:MONDO:0007614,MedGen:C1302995,OMIM:PS135700,Orphanet:45358] |
|
rs1135401758
|
Likely pathogenic |
Complex cortical dysplasia with other brain malformations 7|not provided [MONDO:MONDO:0012399,MedGen:C3552236,OMIM:610031,Orphanet:300573|MedGen:CN517202] |
|
rs1135401776
|
Pathogenic |
Noonan syndrome 3 [MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648] |
|
rs114636410
|
- |
- |
|
rs11549976
|
LB/B |
- |
|
rs11554273
|
Pathogenic |
McCune-Albright syndrome|Sex cord-stromal tumor|Cushing syndrome|Neoplasm of the large intestine|Hepatocellular carcinoma|Neoplasm|Lung adenocarcinoma|Neoplasm of uterine cervix|Squamous cell carcinoma of the head and neck|Pancreatic adenocarcinoma|Malignant melanoma of skin|Breast neoplasm|Adrenal cortex carcinoma|Gastric adenocarcinoma|Pituitary adenoma 3, multiple types|not provided [MONDO:MONDO:0018919,MedGen:C0242292,OMIM:174800,Orphanet:562|MONDO:MONDO:0006055,MedGen:C0206724|MONDO:MONDO:0018912,MedGen:C0010481,Orphanet:189427,Orphanet:553|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0002664,Human Phenotype Ontology:HP:0003008,Human Phenotype Ontology:HP:0006741,MONDO:MONDO:0005070,MeSH:D009369,MedGen:C0027651|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0054665,MedGen:C4540135,OMIM:617686|MedGen:C3661900] |
|
rs11554290
|
Pathogenic |
Thyroid cancer, nonmedullary, 2|Epidermal nevus|Non-small cell lung carcinoma|Large congenital melanocytic nevus|Neurocutaneous melanocytosis|Linear nevus sebaceous syndrome|not provided|Adrenal cortex carcinoma|Ovarian serous cystadenocarcinoma|Malignant melanoma of skin|Nasopharyngeal neoplasm|B-cell chronic lymphocytic leukemia|Papillary renal cell carcinoma type 1|Neoplasm of the large intestine|Melanoma|Glioblastoma|Transitional cell carcinoma of the bladder|Neoplasm of brain|Lung adenocarcinoma|Malignant neoplasm of body of uterus|Multiple myeloma|Gastric adenocarcinoma|Hepatocellular carcinoma|Acute myeloid leukemia [MONDO:MONDO:0008566,MedGen:C4225426,OMIM:188470|Human Phenotype Ontology:HP:0010816,MONDO:MONDO:0008093,MedGen:C0334082,OMIM:162900,Orphanet:79414|Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|Human Phenotype Ontology:HP:0005600,Human Phenotype Ontology:HP:0005604,MONDO:MONDO:0044792,MedGen:C1842036,OMIM:137550,Orphanet:626|MONDO:MONDO:0009578,MedGen:C0544862,OMIM:249400,Orphanet:2481|Human Phenotype Ontology:HP:0010817,MONDO:MONDO:0008097,MedGen:C4552097,OMIM:163200,Orphanet:2612|MedGen:C3661900|Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0100630,MONDO:MONDO:0005375,MeSH:D009303,MedGen:C0027439|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MedGen:C0153574|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519] |
|
rs11554290
|
Pathogenic |
not provided|Malignant neoplasm of body of uterus|Malignant melanoma of skin|Melanoma|Papillary renal cell carcinoma type 1|Adrenal cortex carcinoma|Multiple myeloma|Gastric adenocarcinoma|Neoplasm of brain|Acute myeloid leukemia|Nasopharyngeal neoplasm|Non-small cell lung carcinoma|Neoplasm of the large intestine|Glioblastoma|Hepatocellular carcinoma|Ovarian serous cystadenocarcinoma|Lung adenocarcinoma|B-cell chronic lymphocytic leukemia|Transitional cell carcinoma of the bladder|Thyroid tumor|Noonan syndrome 6 [MedGen:C3661900|MedGen:C0153574|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0100630,MONDO:MONDO:0005375,MeSH:D009303,MedGen:C0027439|Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|MONDO:MONDO:0013186,MedGen:C2750732,OMIM:613224,Orphanet:648] |
|
rs1158027383
|
- |
- |
|
rs1165052640
|
Pathogenic/Likely pathogenic |
not provided|Familial hemiplegic migraine [MedGen:C3661900|MONDO:MONDO:0000700,MedGen:C0338484,OMIM:PS141500] |
|
rs1167433865
|
- |
- |
|
rs1170892326
|
- |
- |
|
rs1177201180
|
US |
Cystic fibrosis (CF) [MIM:219700] |
|
rs1178427226
|
Pathogenic/Likely pathogenic |
Autosomal recessive distal spinal muscular atrophy 1 [MONDO:MONDO:0011436,MedGen:C1858517,OMIM:604320,Orphanet:98920]; Charcot-Marie-Tooth disease axonal type 2S|Autosomal recessive distal spinal muscular atrophy 1 [MONDO:MONDO:0014511,MedGen:C4015349,OMIM:616155,Orphanet:443073|MONDO:MONDO:0011436,MedGen:C1858517,OMIM:604320,Orphanet:98920] |
|
rs1184952683
|
- |
- |
|
rs1192977984
|
Likely pathogenic |
Baraitser-winter syndrome 2 [MONDO:MONDO:0013812,MedGen:C3281235,OMIM:614583,Orphanet:2995]; Autosomal dominant nonsyndromic hearing loss 20 [MONDO:MONDO:0011480,MedGen:C1858172,OMIM:604717,Orphanet:90635] |
|
rs1209280928
|
Likely pathogenic |
Severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-negative, NK cell-negative, due to adenosine deaminase deficiency [MONDO:MONDO:0007064,MedGen:C1863236,OMIM:102700,Orphanet:277] |
|
rs121434595
|
US |
Colorectal cancer |
|
rs121434595
|
Likely pathogenic |
Carcinoma of colon|Large congenital melanocytic nevus|Medulloblastoma|Gastric adenocarcinoma|Transitional cell carcinoma of the bladder|Non-Hodgkin lymphoma|Melanoma|Acute myeloid leukemia|Multiple myeloma|Myelodysplastic syndrome|Neoplasm of the large intestine|Malignant melanoma of skin|Noonan syndrome 6 [MONDO:MONDO:0002032,MedGen:C0699790|Human Phenotype Ontology:HP:0005600,Human Phenotype Ontology:HP:0005604,MONDO:MONDO:0044792,MedGen:C1842036,OMIM:137550,Orphanet:626|Human Phenotype Ontology:HP:0002885,MONDO:MONDO:0007959,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:616|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0012539,MONDO:MONDO:0018908,MedGen:C0024305,Orphanet:547|Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MONDO:MONDO:0013186,MedGen:C2750732,OMIM:613224,Orphanet:648] |
|
rs121434596
|
LP/P |
Leukemia, juvenile myelomonocytic (JMML) [MIM:607785] |
|
rs121434596
|
Pathogenic/Likely pathogenic |
Juvenile myelomonocytic leukemia|Noonan syndrome 6|Autoimmune lymphoproliferative syndrome type 4|not provided|Transitional cell carcinoma of the bladder|Malignant melanoma of skin|Medulloblastoma|Gastric adenocarcinoma|Myelodysplastic syndrome|Melanoma|Multiple myeloma|Neoplasm of the large intestine|Acute myeloid leukemia|Non-Hodgkin lymphoma|Acute megakaryoblastic leukemia in down syndrome [Human Phenotype Ontology:HP:0012209,MONDO:MONDO:0011908,MedGen:C0349639,OMIM:607785,Orphanet:86834|MONDO:MONDO:0013186,MedGen:C2750732,OMIM:613224,Orphanet:648|MONDO:MONDO:0013767,MedGen:C2674723,OMIM:614470,Orphanet:268114|MedGen:CN517202|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0002885,MONDO:MONDO:0007959,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:616|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0012539,MONDO:MONDO:0018908,MedGen:C0024305,Orphanet:547|MONDO:MONDO:0020526,MedGen:CN207426,Orphanet:99887] |
|
rs121908714
|
- |
- |
|
rs121908714
|
LP/P |
Severe combined immunodeficiency autosomal recessive T-cell-negative/B-cell-negative/NK-cell-negative due to adenosine deaminase deficiency (ADASCID) [MIM:102700] |
|
rs121908717
|
LP/P |
Severe combined immunodeficiency autosomal recessive T-cell-negative/B-cell-negative/NK-cell-negative due to adenosine deaminase deficiency (ADASCID) [MIM:102700] |
|
rs121908724
|
LP/P |
Severe combined immunodeficiency autosomal recessive T-cell-negative/B-cell-negative/NK-cell-negative due to adenosine deaminase deficiency (ADASCID) [MIM:102700] |
|
rs121908725
|
LP/P |
Severe combined immunodeficiency autosomal recessive T-cell-negative/B-cell-negative/NK-cell-negative due to adenosine deaminase deficiency (ADASCID) [MIM:102700] |
|
rs121908759
|
LP/P |
Congenital bilateral absence of the vas deferens (CBAVD) [MIM:277180] |
|
rs121908805
|
Pathogenic |
Cystic fibrosis|not provided|Obstructive azoospermia|Cystic fibrosis [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586|MedGen:C3661900|Human Phenotype Ontology:HP:0011962,MedGen:C4023106|MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586]; Congenital bilateral aplasia of vas deferens from CFTR mutation|CFTR-related disorders|Bronchiectasis with or without elevated sweat chloride 1 [MONDO:MONDO:0010178,MedGen:C0403814,OMIM:277180,Orphanet:48||MONDO:MONDO:0008887,MedGen:C2749757,OMIM:211400,Orphanet:60033] |
|
rs121908951
|
LP/P |
Brachyolmia type 4 with mild epiphyseal and metaphyseal changes (BCYM4) [MIM:612847] |
|
rs121909009
|
LP/P |
Cystic fibrosis (CF) [MIM:219700] |
|
rs121909033
|
LP/P |
Cystic fibrosis (CF) [MIM:219700] |
|
rs121909078
|
LP/P |
Charcot-Marie-Tooth disease, axonal, 2B (CMT2B) [MIM:600882] |
|
rs121909081
|
LP/P |
Charcot-Marie-Tooth disease, axonal, 2B (CMT2B) [MIM:600882] |
|
rs121909521
|
Pathogenic |
Actin accumulation myopathy [MONDO:MONDO:0008070,MedGen:C3711389,OMIM:161800,Orphanet:98904] |
|
rs121909521
|
Pathogenic/Likely pathogenic |
not provided|Congenital myopathy 2c, severe infantile, autosomal dominant [MedGen:C3661900|MONDO:MONDO:0859523,MedGen:C5830333,OMIM:620278] |
|
rs121909528
|
Pathogenic |
Actin accumulation myopathy [MONDO:MONDO:0008070,MedGen:C3711389,OMIM:161800,Orphanet:98904] |
|
rs121912734
|
Pathogenic |
Keratosis follicularis [MONDO:MONDO:0007417,MedGen:C0022595,OMIM:124200,Orphanet:218] |
|
rs121913233
|
US |
Melanoma |
|
rs121913233
|
Likely pathogenic |
Linear nevus sebaceous syndrome|not provided|Thyroid tumor|Neoplasm|Vascular Tumors Including Pyogenic Granuloma|Noonan syndrome and Noonan-related syndrome|Salivary gland neoplasm [Human Phenotype Ontology:HP:0010817,MONDO:MONDO:0008097,MedGen:C4552097,OMIM:163200,Orphanet:2612|MedGen:C3661900|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|Human Phenotype Ontology:HP:0002664,Human Phenotype Ontology:HP:0003008,Human Phenotype Ontology:HP:0006741,MONDO:MONDO:0005070,MeSH:D009369,MedGen:C0027651||MONDO:MONDO:0020297,MedGen:C5681679,Orphanet:98733|Human Phenotype Ontology:HP:0100684,MONDO:MONDO:0021357,MedGen:C0036095] |
|
rs121913233
|
Likely pathogenic |
Transitional cell carcinoma of the bladder|Pancreatic adenocarcinoma|Multiple myeloma|B-cell chronic lymphocytic leukemia|Neoplasm|Neoplasm of the large intestine|Acute myeloid leukemia|Malignant neoplasm of body of uterus|Malignant melanoma of skin|Gastric adenocarcinoma|Squamous cell lung carcinoma|Thyroid tumor|Hepatocellular carcinoma|Lung adenocarcinoma [Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0002664,Human Phenotype Ontology:HP:0003008,Human Phenotype Ontology:HP:0006741,MONDO:MONDO:0005070,MeSH:D009369,MedGen:C0027651|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|MedGen:C0153574|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013] |
|
rs121913236
|
Likely pathogenic |
Neoplasm of the large intestine|Linear nevus sebaceous syndrome [Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0010817,MONDO:MONDO:0008097,MedGen:C4552097,OMIM:163200,Orphanet:2612] |
|
rs121913236
|
LP/P |
Cardiofaciocutaneous syndrome 2 (CFC2) [MIM:615278] |
|
rs121913237
|
LP/P |
Keratinocytic non-epidermolytic nevus (KNEN) [MIM:162900] |
|
rs121913237
|
Pathogenic/Likely pathogenic |
Epidermal nevus|not provided|Juvenile myelomonocytic leukemia|Multiple myeloma|Melanoma|Acute myeloid leukemia|Malignant neoplasm of body of uterus|Myelodysplastic syndrome|Neoplasm of the large intestine|Gastric adenocarcinoma|Non-small cell lung carcinoma|Malignant melanoma of skin|Noonan syndrome 6|Noonan syndrome and Noonan-related syndrome|RASopathy|Autoimmune lymphoproliferative syndrome type 4|NRAS-related condition [Human Phenotype Ontology:HP:0010816,MONDO:MONDO:0008093,MedGen:C0334082,OMIM:162900,Orphanet:79414|MedGen:C3661900|Human Phenotype Ontology:HP:0012209,MONDO:MONDO:0011908,MedGen:C0349639,OMIM:607785,Orphanet:86834|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|MedGen:C0153574|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MONDO:MONDO:0013186,MedGen:C2750732,OMIM:613224,Orphanet:648|MONDO:MONDO:0020297,MedGen:C5681679,Orphanet:98733|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391|MONDO:MONDO:0013767,MedGen:C2674723,OMIM:614470,Orphanet:268114|] |
|
rs121913237
|
Pathogenic/Likely pathogenic |
Noonan syndrome|not provided|Melanoma|Acute myeloid leukemia|Malignant melanoma of skin|Malignant neoplasm of body of uterus|Neoplasm of the large intestine|Multiple myeloma|Gastric adenocarcinoma|Myelodysplastic syndrome|RASopathy [MONDO:MONDO:0018997,MeSH:D009634,MedGen:C0028326,OMIM:PS163950,Orphanet:648|MedGen:C3661900|Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MedGen:C0153574|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391] |
|
rs121913240
|
US |
A colorectal cancer sample |
|
rs121913240
|
Pathogenic |
Non-small cell lung carcinoma|Medullary thyroid carcinoma|Thyroid tumor|Neoplasm of the large intestine|Multiple myeloma [Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|Human Phenotype Ontology:HP:0002865,MONDO:MONDO:0015277,MeSH:C536914,MedGen:C0238462,Orphanet:1332|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443] |
|
rs121913250
|
US |
Leukemia |
|
rs121913250
|
Pathogenic |
not provided|Malignant neoplasm of body of uterus|Neoplasm of the large intestine|Multiple myeloma|Acute myeloid leukemia|Non-small cell lung carcinoma|Malignant melanoma of skin|Melanoma|Gastric adenocarcinoma|Myelodysplastic syndrome|Chronic myelogenous leukemia, BCR-ABL1 positive [MedGen:C3661900|MedGen:C0153574|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0005506,Human Phenotype Ontology:HP:0005544,MONDO:MONDO:0011996,MeSH:D015464,MedGen:C0279543,OMIM:608232,Orphanet:521] |
|
rs121913250
|
Pathogenic |
not provided|Gastric adenocarcinoma|Melanoma|Multiple myeloma|Acute myeloid leukemia|Chronic myelogenous leukemia, BCR-ABL1 positive|Malignant neoplasm of body of uterus|Neoplasm of the large intestine|Myelodysplastic syndrome|Non-small cell lung carcinoma|Malignant melanoma of skin|Increased nuchal translucency|Noonan syndrome 6 [MedGen:C3661900|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0005506,Human Phenotype Ontology:HP:0005544,MONDO:MONDO:0011996,MeSH:D015464,MedGen:C0279543,OMIM:608232,Orphanet:521|MedGen:C0153574|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0010880,MedGen:C4023676|MONDO:MONDO:0013186,MedGen:C2750732,OMIM:613224,Orphanet:648] |
|
rs121913250
|
Pathogenic |
Juvenile myelomonocytic leukemia [Human Phenotype Ontology:HP:0012209,MONDO:MONDO:0011908,MedGen:C0349639,OMIM:607785,Orphanet:86834]; Noonan syndrome|not provided|Melanoma|Malignant melanoma of skin|Multiple myeloma|Malignant neoplasm of body of uterus|Neoplasm of the large intestine|Gastric adenocarcinoma|Acute myeloid leukemia|Non-small cell lung carcinoma|Myelodysplastic syndrome|RASopathy|Noonan syndrome and Noonan-related syndrome [MONDO:MONDO:0018997,MeSH:D009634,MedGen:C0028326,OMIM:PS163950,Orphanet:648|MedGen:C3661900|Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MedGen:C0153574|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391|MONDO:MONDO:0020297,MedGen:C5681679,Orphanet:98733] |
|
rs121913255
|
Pathogenic/Likely pathogenic |
Non-small cell lung carcinoma|Acute myeloid leukemia|Melanoma [Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202] |
|
rs121913492
|
Pathogenic/Likely pathogenic |
Melanoma|Uveal melanoma [Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202|Human Phenotype Ontology:HP:0007716,MONDO:MONDO:0006486,MeSH:C536494,MedGen:C0220633,OMIM:155720,Orphanet:39044] |
|
rs121913492
|
Pathogenic |
Melanoma|Abnormal cardiovascular system morphology|Sturge-Weber syndrome [Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202|Human Phenotype Ontology:HP:0001632,Human Phenotype Ontology:HP:0002564,Human Phenotype Ontology:HP:0002565,Human Phenotype Ontology:HP:0030680,MedGen:C4049796|MONDO:MONDO:0008501,MedGen:C0038505,OMIM:185300,Orphanet:3205] |
|
rs121913494
|
Pathogenic |
Pituitary adenoma 3, multiple types|McCune-Albright syndrome [MONDO:MONDO:0054665,MedGen:C4540135,OMIM:617686|MONDO:MONDO:0018919,MedGen:C0242292,OMIM:174800,Orphanet:562] |
|
rs121913495
|
Pathogenic |
McCune-Albright syndrome|Cushing syndrome|Sex cord-stromal tumor|Pancreatic adenocarcinoma|Squamous cell carcinoma of the head and neck|Neoplasm|Gastric adenocarcinoma|Adrenal cortex carcinoma|Hepatocellular carcinoma|Malignant melanoma of skin|Neoplasm of the large intestine|Neoplasm of uterine cervix|Lung adenocarcinoma|Breast neoplasm|Pituitary adenoma 3, multiple types|not provided|Pseudohypoparathyroidism type I A [MONDO:MONDO:0018919,MedGen:C0242292,OMIM:174800,Orphanet:562|MONDO:MONDO:0018912,MedGen:C0010481,Orphanet:189427,Orphanet:553|MONDO:MONDO:0006055,MedGen:C0206724|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0002664,Human Phenotype Ontology:HP:0003008,Human Phenotype Ontology:HP:0006741,MONDO:MONDO:0005070,MeSH:D009369,MedGen:C0027651|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0054665,MedGen:C4540135,OMIM:617686|MedGen:C3661900|MONDO:MONDO:0007078,MedGen:C3494506,OMIM:103580,Orphanet:79443] |
|
rs121913496
|
Likely pathogenic |
Transitional cell carcinoma of the bladder|Neoplasm|Breast neoplasm|Malignant melanoma of skin|Prostate adenocarcinoma|Squamous cell carcinoma of the head and neck|Thyroid tumor|Lung adenocarcinoma|Squamous cell lung carcinoma|Squamous cell carcinoma of the skin|Noonan syndrome 3 [Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0002664,Human Phenotype Ontology:HP:0003008,Human Phenotype Ontology:HP:0006741,MONDO:MONDO:0005070,MeSH:D009369,MedGen:C0027651|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MONDO:MONDO:0005082,MedGen:C0007112|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648] |
|
rs121913527
|
Pathogenic/Likely pathogenic |
Neoplasm of the large intestine|Multiple myeloma|Autoimmune lymphoproliferative syndrome type 4|RASopathy [Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MONDO:MONDO:0013767,MedGen:C2674723,OMIM:614470,Orphanet:268114|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391] |
|
rs121913527
|
LP/P |
Oculoectodermal syndrome (OES) [MIM:600268] |
|
rs121913528
|
LP/P |
Gastric cancer (GASC) [MIM:613659] |
|
rs121913529
|
US |
Colorectal cancer samples |
|
rs121913529
|
LP/P |
Schimmelpenning-Feuerstein-Mims syndrome (SFM) [MIM:163200] |
|
rs121913529
|
Likely pathogenic |
Neoplasm of the large intestine|Neoplasm of ovary|Lung adenocarcinoma|Gastrointestinal stromal tumor|Multiple myeloma|not provided|Gallbladder cancer|KRAS-related condition|Non-small cell lung carcinoma [Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0100723,MONDO:MONDO:0011719,MeSH:D046152,MedGen:C0238198,OMIM:606764,Orphanet:44890|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MedGen:C3661900|MONDO:MONDO:0005411,MedGen:C0153452||Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131] |
|
rs121913529
|
Pathogenic |
Carcinoma of pancreas|Epidermal nevus|Nevus sebaceous|Linear nevus sebaceous syndrome|Juvenile myelomonocytic leukemia|Autoimmune lymphoproliferative syndrome type 4|Non-small cell lung carcinoma|Neoplasm of ovary|not provided|Lung carcinoma|Neoplasm of the large intestine|Acute myeloid leukemia|Thyroid tumor|RASopathy|Cerebral arteriovenous malformation|Vascular Tumors Including Pyogenic Granuloma|Primary low grade serous adenocarcinoma of ovary|Capillary malformation-arteriovenous malformation 1|Encephalocraniocutaneous lipomatosis|Gastric cancer|Atypical endometrial hyperplasia [MONDO:MONDO:0005192,MeSH:C562463,MedGen:C0235974,OMIM:260350,Orphanet:1333,Orphanet:217074|Human Phenotype Ontology:HP:0010816,MONDO:MONDO:0008093,MedGen:C0334082,OMIM:162900,Orphanet:79414|Human Phenotype Ontology:HP:0010815,MedGen:C3854181|Human Phenotype Ontology:HP:0010817,MONDO:MONDO:0008097,MedGen:C4552097,OMIM:163200,Orphanet:2612|Human Phenotype Ontology:HP:0012209,MONDO:MONDO:0011908,MedGen:C0349639,OMIM:607785,Orphanet:86834|MONDO:MONDO:0013767,MedGen:C2674723,OMIM:614470,Orphanet:268114|Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MedGen:C3661900|MONDO:MONDO:0005138,MedGen:C0684249|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391|Human Phenotype Ontology:HP:0002408,MONDO:MONDO:0007154,MedGen:C0917804,OMIM:108010,Orphanet:46724||MedGen:C4302356|MONDO:MONDO:0020783,MedGen:C4747394,OMIM:608354,Orphanet:137667,Orphanet:90307|MONDO:MONDO:0013074,MedGen:C0406612,OMIM:613001,Orphanet:2396|Human Phenotype Ontology:HP:0012126,MONDO:MONDO:0001056,MeSH:D013274,MedGen:C0024623,OMIM:613659|MONDO:MONDO:0006096,MedGen:C0349579]; Endometrial hyperplasia without atypia [MONDO:MONDO:0006193,MedGen:C1516855] |
|
rs121913529
|
Pathogenic |
Carcinoma of pancreas|Nevus sebaceous|Juvenile myelomonocytic leukemia|Non-small cell lung carcinoma|not provided|Thyroid tumor|Neoplasm of ovary|Acute myeloid leukemia|Neoplasm of the large intestine|Cerebral arteriovenous malformation|Chronic myelogenous leukemia, BCR-ABL1 positive|Linear nevus sebaceous syndrome|Lung sarcomatoid carcinoma|RASopathy [MONDO:MONDO:0005192,MeSH:C562463,MedGen:C0235974,OMIM:260350,Orphanet:1333,Orphanet:217074|Human Phenotype Ontology:HP:0010815,MedGen:C3854181|Human Phenotype Ontology:HP:0012209,MONDO:MONDO:0011908,MedGen:C0349639,OMIM:607785,Orphanet:86834|Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|MedGen:C3661900|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0002408,MONDO:MONDO:0007154,MedGen:C0917804,OMIM:108010,Orphanet:46724|Human Phenotype Ontology:HP:0005506,Human Phenotype Ontology:HP:0005544,MONDO:MONDO:0011996,MeSH:D015464,MedGen:C0279543,OMIM:608232,Orphanet:521|Human Phenotype Ontology:HP:0010817,MONDO:MONDO:0008097,MedGen:C4552097,OMIM:163200,Orphanet:2612|MONDO:MONDO:0006279,MedGen:C1708781|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391] |
|
rs121913529
|
LP/P |
Gastric cancer (GASC) [MIM:613659] |
|
rs121913530
|
US |
Lung carcinoma |
|
rs121913530
|
Pathogenic/Likely pathogenic |
Squamous cell lung carcinoma|Malignant tumor of urinary bladder|Non-small cell lung carcinoma|Thyroid tumor|Neoplasm of ovary|Neoplasm of the large intestine|Adenoid cystic carcinoma|not provided|RASopathy [Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MONDO:MONDO:0001187,MedGen:C0005684,OMIM:109800,Orphanet:157980|Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0004971,MeSH:D003528,MedGen:C0010606|MedGen:C3661900|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391] |
|
rs121913530
|
LP/P |
Leukemia, juvenile myelomonocytic (JMML) [MIM:607785] |
|
rs121913530
|
Likely pathogenic |
Lung carcinoma|Non-small cell lung carcinoma|Endometrial carcinoma|Thyroid tumor|Neoplasm of ovary|Lung adenocarcinoma|Neoplasm of the large intestine|Gallbladder cancer|not provided|RASopathy [MONDO:MONDO:0005138,MedGen:C0684249|Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|Human Phenotype Ontology:HP:0012114,MONDO:MONDO:0002447,MedGen:C0476089,OMIM:608089|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0005411,MedGen:C0153452|MedGen:C3661900|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391] |
|
rs121913535
|
LB/B |
- |
|
rs121913535
|
Pathogenic/Likely pathogenic |
Non-small cell lung carcinoma|Autoimmune lymphoproliferative syndrome type 4|Neoplasm of the large intestine|not provided|KRAS-related disorders [Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|MONDO:MONDO:0013767,MedGen:C2674723,OMIM:614470,Orphanet:268114|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MedGen:CN517202|] |
|
rs121913538
|
LP/P |
Oculoectodermal syndrome (OES) [MIM:600268] |
|
rs121913538
|
Pathogenic |
OCULOECTODERMAL SYNDROME, SOMATIC|Angiosarcoma|Encephalocraniocutaneous lipomatosis|RASopathy [|Human Phenotype Ontology:HP:0200058,MONDO:MONDO:0016982,MeSH:D006394,MedGen:C0018923,Orphanet:263413|MONDO:MONDO:0013074,MedGen:C0406612,OMIM:613001,Orphanet:2396|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391] |
|
rs121917757
|
Likely pathogenic |
Myopathy, congenital, with excess of muscle spindles|Costello syndrome|not provided [MONDO:MONDO:0800299,MedGen:C1968782|MONDO:MONDO:0009026,MedGen:C0587248,OMIM:218040,Orphanet:3071|MedGen:C3661900] |
|
rs121917758
|
LP/P |
Costello syndrome (CSTLO) [MIM:218040] |
|
rs121917759
|
LP/P |
Costello syndrome (CSTLO) [MIM:218040] |
|
rs121917759
|
Likely pathogenic |
Costello syndrome|Neoplasm of the large intestine|Acute myeloid leukemia|Gastric adenocarcinoma|Multiple myeloma|Neoplasm of uterine cervix|Lung adenocarcinoma [MONDO:MONDO:0009026,MedGen:C0587248,OMIM:218040,Orphanet:3071|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013] |
|
rs121917887
|
LB/B |
- |
|
rs121918614
|
Likely pathogenic |
Migraine, familial hemiplegic, 2|Familial hemiplegic migraine [MONDO:MONDO:0011232,MedGen:C1865322,OMIM:602481,Orphanet:569|MONDO:MONDO:0000700,MedGen:C0338484,OMIM:PS141500] |
|
rs121918616
|
Pathogenic/Likely pathogenic |
Migraine, familial basilar|not provided|Familial hemiplegic migraine|ATP1A2-RELATED DISORDERS|Migraine, familial hemiplegic, 2 [MedGen:C1865323|MedGen:C3661900|MONDO:MONDO:0000700,MedGen:C0338484,OMIM:PS141500||MONDO:MONDO:0011232,MedGen:C1865322,OMIM:602481,Orphanet:569] |
|
rs121918620
|
Pathogenic/Likely pathogenic |
Migraine, familial hemiplegic, 2|Familial hemiplegic migraine|Inborn genetic diseases|not provided [MONDO:MONDO:0011232,MedGen:C1865322,OMIM:602481,Orphanet:569|MONDO:MONDO:0000700,MedGen:C0338484,OMIM:PS141500|MeSH:D030342,MedGen:C0950123|MedGen:C3661900] |
|
rs121964852
|
Pathogenic |
Congenital myopathy 4B, autosomal recessive|Congenital myopathy 4A, autosomal dominant|not provided|Congenital myopathy 4B, autosomal recessive [MONDO:MONDO:0012239,MedGen:C5829889,OMIM:609284,Orphanet:171433,Orphanet:171439,Orphanet:171881|MONDO:MONDO:0800341,MedGen:CN178536,OMIM:255310|MedGen:C3661900|MONDO:MONDO:0012239,MedGen:C5829889,OMIM:609284,Orphanet:171433,Orphanet:171439,Orphanet:171881]; Congenital myopathy with fiber type disproportion|See cases [MONDO:MONDO:0009711,MedGen:C0546264,Orphanet:2020|] |
|
rs121964854
|
Pathogenic/Likely pathogenic |
Congenital myopathy with fiber type disproportion|not provided|Congenital myopathy 4B, autosomal recessive|Congenital myopathy 4B, autosomal recessive [MONDO:MONDO:0009711,MedGen:C0546264,Orphanet:2020|MedGen:C3661900|MONDO:MONDO:0012239,MedGen:C5829889,OMIM:609284,Orphanet:171433,Orphanet:171439,Orphanet:171881|MONDO:MONDO:0012239,MedGen:C5829889,OMIM:609284,Orphanet:171433,Orphanet:171439,Orphanet:171881]; Congenital myopathy with fiber type disproportion|Congenital myopathy 4A, autosomal dominant [MONDO:MONDO:0009711,MedGen:C0546264,Orphanet:2020|MONDO:MONDO:0800341,MedGen:CN178536,OMIM:255310] |
|
rs1221315322
|
- |
- |
|
rs1229554099
|
- |
- |
|
rs1235670046
|
- |
- |
|
rs1244531323
|
- |
- |
|
rs1246861211
|
Pathogenic |
Non-immune hydrops fetalis [Human Phenotype Ontology:HP:0001790,MONDO:MONDO:0009369,MedGen:C0455988,OMIM:236750,Orphanet:363999] |
|
rs1247270735
|
- |
- |
|
rs1247497521
|
Pathogenic/Likely pathogenic |
not provided|Purine-nucleoside phosphorylase deficiency [MedGen:C3661900|MONDO:MONDO:0013171,MedGen:C0268125,OMIM:613179,Orphanet:760] |
|
rs1251962665
|
- |
- |
|
rs1267396058
|
Pathogenic |
Pseudohypoparathyroidism type I A [MONDO:MONDO:0007078,MedGen:C3494506,OMIM:103580,Orphanet:79443] |
|
rs1267519974
|
Likely pathogenic |
Intellectual disability, X-linked 102 [MONDO:MONDO:0010497,MedGen:C5393299,OMIM:300958,Orphanet:457260] |
|
rs1272546759
|
Likely pathogenic |
Pseudopseudohypoparathyroidism [MONDO:MONDO:0012912,MedGen:C0033835,OMIM:612463,Orphanet:79445] |
|
rs1297642271
|
- |
- |
|
rs1298336881
|
- |
- |
|
rs1298799127
|
- |
- |
|
rs1300241521
|
- |
- |
|
rs1323796901
|
- |
- |
|
rs1329985221
|
- |
- |
|
rs1335558363
|
Pathogenic |
Familial hypocalciuric hypercalcemia 2 [MONDO:MONDO:0007792,MedGen:C1840347,OMIM:145981,Orphanet:101049,Orphanet:405] |
|
rs1339474843
|
- |
- |
|
rs1339474843
|
Likely pathogenic |
Oocyte maturation defect 2 [MONDO:MONDO:0021573,MedGen:C4225210,OMIM:616780] |
|
rs1340115666
|
- |
- |
|
rs1340227061
|
- |
- |
|
rs1343080275
|
- |
- |
|
rs1344826245
|
Likely pathogenic |
Adenine phosphoribosyltransferase deficiency [MONDO:MONDO:0013869,MedGen:C0268120,OMIM:614723,Orphanet:976] |
|
rs1350949739
|
- |
- |
|
rs1356115868
|
- |
- |
|
rs1357895717
|
- |
- |
|
rs1362994447
|
Likely pathogenic |
not provided|Autosomal dominant nonsyndromic hearing loss 20 [MedGen:C3661900|MONDO:MONDO:0011480,MedGen:C1858172,OMIM:604717,Orphanet:90635]; Baraitser-winter syndrome 2 [MONDO:MONDO:0013812,MedGen:C3281235,OMIM:614583,Orphanet:2995] |
|
rs1363997553
|
- |
- |
|
rs1364564756
|
- |
- |
|
rs1372608166
|
- |
- |
|
rs1376129073
|
- |
- |
|
rs137852485
|
LP/P |
Hyperuricemia, HPRT-related (HRH) [MIM:300323] |
|
rs137852487
|
LP/P |
Lesch-Nyhan syndrome (LNS) [MIM:300322] |
|
rs137852487
|
Pathogenic |
HPRT NEW HAVEN|Lesch-Nyhan syndrome|Partial hypoxanthine-guanine phosphoribosyltransferase deficiency [|MONDO:MONDO:0010298,MedGen:C0023374,OMIM:300322,Orphanet:510|MONDO:MONDO:0010299,MedGen:C0268117,OMIM:300323,Orphanet:79233]; Lesch-Nyhan syndrome [MONDO:MONDO:0010298,MedGen:C0023374,OMIM:300322,Orphanet:510] |
|
rs137852488
|
LP/P |
Lesch-Nyhan syndrome (LNS) [MIM:300322] |
|
rs137852489
|
Pathogenic |
Lesch-Nyhan syndrome|Lesch-Nyhan syndrome [MONDO:MONDO:0010298,MedGen:C0023374,OMIM:300322,Orphanet:510|MONDO:MONDO:0010298,MedGen:C0023374,OMIM:300322,Orphanet:510]; Partial hypoxanthine-guanine phosphoribosyltransferase deficiency [MONDO:MONDO:0010299,MedGen:C0268117,OMIM:300323,Orphanet:79233] |
|
rs137852496
|
LP/P |
Lesch-Nyhan syndrome (LNS) [MIM:300322] |
|
rs137852497
|
Pathogenic |
Lesch-Nyhan syndrome|Partial hypoxanthine-guanine phosphoribosyltransferase deficiency [MONDO:MONDO:0010298,MedGen:C0023374,OMIM:300322,Orphanet:510|MONDO:MONDO:0010299,MedGen:C0268117,OMIM:300323,Orphanet:79233]; Lesch-Nyhan syndrome [MONDO:MONDO:0010298,MedGen:C0023374,OMIM:300322,Orphanet:510] |
|
rs137852498
|
LP/P |
Hyperuricemia, HPRT-related (HRH) [MIM:300323] |
|
rs137852504
|
LP/P |
Hyperuricemia, HPRT-related (HRH) [MIM:300323] |
|
rs137852543
|
LP/P |
Phosphoribosylpyrophosphate synthetase superactivity (PRPS1 superactivity) [MIM:300661] |
|
rs137852545
|
LP/P |
Phosphoribosylpyrophosphate synthetase superactivity (PRPS1 superactivity) [MIM:300661] |
|
rs137853194
|
Pathogenic |
Complex cortical dysplasia with other brain malformations 7 [MONDO:MONDO:0012399,MedGen:C3552236,OMIM:610031,Orphanet:300573] |
|
rs137853226
|
Pathogenic |
Pituitary dependent hypercortisolism [MONDO:MONDO:0009050,MedGen:C0221406,OMIM:219090,Orphanet:96253] |
|
rs137854533
|
Pathogenic |
Pituitary adenoma 3, multiple types [MONDO:MONDO:0054665,MedGen:C4540135,OMIM:617686] |
|
rs137915627
|
- |
- |
|
rs138781159
|
Pathogenic |
Adenine phosphoribosyltransferase deficiency [MONDO:MONDO:0013869,MedGen:C0268120,OMIM:614723,Orphanet:976] |
|
rs138825464
|
- |
- |
|
rs1388698482
|
- |
- |
|
rs139190720
|
- |
- |
|
rs139268034
|
- |
- |
|
rs139499540
|
- |
- |
|
rs139573311
|
Pathogenic |
Cystic fibrosis|not provided|Cystic fibrosis [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586|MedGen:C3661900|MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586]; Congenital bilateral aplasia of vas deferens from CFTR mutation|CFTR-related disorders|Hereditary pancreatitis [MONDO:MONDO:0010178,MedGen:C0403814,OMIM:277180,Orphanet:48||MONDO:MONDO:0008185,MedGen:C0238339,OMIM:167800,Orphanet:676]; Cystic fibrosis [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586]; Bronchiectasis with or without elevated sweat chloride 1 [MONDO:MONDO:0008887,MedGen:C2749757,OMIM:211400,Orphanet:60033]; Congenital bilateral aplasia of vas deferens from CFTR mutation|Bronchiectasis with or without elevated sweat chloride 1 [MONDO:MONDO:0010178,MedGen:C0403814,OMIM:277180,Orphanet:48|MONDO:MONDO:0008887,MedGen:C2749757,OMIM:211400,Orphanet:60033] |
|
rs139689788
|
- |
- |
|
rs1397449789
|
- |
- |
|
rs1398420394
|
Likely pathogenic |
Purine-nucleoside phosphorylase deficiency [MONDO:MONDO:0013171,MedGen:C0268125,OMIM:613179,Orphanet:760] |
|
rs1405334512
|
- |
- |
|
rs140928408
|
- |
- |
|
rs1409892710
|
Pathogenic |
Brody myopathy [MONDO:MONDO:0010977,MedGen:C1832918,OMIM:601003,Orphanet:53347] |
|
rs1411316425
|
Likely pathogenic |
Baraitser-Winter syndrome 1 [MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995] |
|
rs1411730717
|
- |
- |
|
rs141437989
|
- |
- |
|
rs141810774
|
- |
- |
|
rs1419090736
|
Pathogenic |
Hereditary spastic paraplegia 45 [MONDO:MONDO:0013165,MedGen:C3888209,OMIM:613162,Orphanet:320396] |
|
rs1419461472
|
- |
- |
|
rs142619172
|
- |
- |
|
rs142839840
|
- |
- |
|
rs1431654292
|
- |
- |
|
rs1432262955
|
- |
- |
|
rs1440561057
|
- |
- |
|
rs144181978
|
LP/P |
Progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 4 (PEOB4) [MIM:617070] |
|
rs145097404
|
- |
- |
|
rs145142862
|
- |
- |
|
rs1452483770
|
Pathogenic/Likely pathogenic |
Severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-negative, NK cell-negative, due to adenosine deaminase deficiency|Severe combined immunodeficiency disease [MONDO:MONDO:0007064,MedGen:C1863236,OMIM:102700,Orphanet:277|Human Phenotype Ontology:HP:0004430,MONDO:MONDO:0015974,MeSH:D016511,MedGen:C0085110,Orphanet:183660] |
|
rs145370575
|
- |
- |
|
rs146045963
|
- |
- |
|
rs146054415
|
- |
- |
|
rs1465803265
|
LP/P |
Neuronopathy, distal hereditary motor, 6 (HMN6) [MIM:604320] |
|
rs1475294107
|
- |
- |
|
rs1477361505
|
- |
- |
|
rs148119952
|
Pathogenic |
Intellectual developmental disorder with or without peripheral neuropathy [MONDO:MONDO:0859240,MedGen:C5676969,OMIM:619844] |
|
rs148785781
|
- |
- |
|
rs149353437
|
- |
- |
|
rs149520391
|
Pathogenic |
Severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-negative, NK cell-negative, due to adenosine deaminase deficiency [MONDO:MONDO:0007064,MedGen:C1863236,OMIM:102700,Orphanet:277] |
|
rs149917863
|
- |
- |
|
rs150181226
|
LP/P |
Desbuquois dysplasia 1 (DBQD1) [MIM:251450] |
|
rs150262349
|
- |
- |
|
rs151079750
|
LP/P |
Neuronopathy, distal hereditary motor, 6 (HMN6) [MIM:604320] |
|
rs1553245771
|
Pathogenic |
not provided|Familial hemiplegic migraine [MedGen:C3661900|MONDO:MONDO:0000700,MedGen:C0338484,OMIM:PS141500] |
|
rs1553500862
|
Pathogenic |
Keratoconus 9 [MONDO:MONDO:0054771,MedGen:C4693660,OMIM:617928] |
|
rs1553710664
|
LP/P |
Epileptic encephalopathy, infantile or early childhood, 3 (IECEE3) [MIM:618012] |
|
rs1554126925
|
Likely pathogenic |
Complex cortical dysplasia with other brain malformations 7 [MONDO:MONDO:0012399,MedGen:C3552236,OMIM:610031,Orphanet:300573] |
|
rs1554258695
|
Pathogenic/Likely pathogenic |
Infantile-onset generalized dyskinesia with orofacial involvement|Striatal degeneration, autosomal dominant 2 [MONDO:MONDO:0044637,MedGen:C5567464,OMIM:616921,Orphanet:494526|MONDO:MONDO:0014835,MedGen:C4310791,OMIM:616922] |
|
rs1554263326
|
LP/P |
Intellectual developmental disorder, autosomal dominant 48 (MRD48) [MIM:617751] |
|
rs1554264268
|
LP/P |
Intellectual developmental disorder, autosomal dominant 48 (MRD48) [MIM:617751] |
|
rs1554329113
|
Likely pathogenic |
Baraitser-Winter syndrome 1 [MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995] |
|
rs1554767313
|
Pathogenic/Likely pathogenic |
Inborn genetic diseases|Developmental and epileptic encephalopathy, 31 [MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0014598,MedGen:C4225357,OMIM:616346,Orphanet:2382] |
|
rs1554767317
|
Pathogenic/Likely pathogenic |
Inborn genetic diseases|Developmental and epileptic encephalopathy, 31 [MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0014598,MedGen:C4225357,OMIM:616346,Orphanet:2382] |
|
rs1554841990
|
Likely pathogenic |
Aortic aneurysm, familial thoracic 6 [MONDO:MONDO:0012730,MedGen:C2673186,OMIM:611788] |
|
rs1554859966
|
Pathogenic |
Microcephaly with or without chorioretinopathy, lymphedema, or intellectual disability [MONDO:MONDO:0007918,MedGen:C1835265,OMIM:152950,Orphanet:2526] |
|
rs1555666392
|
Pathogenic/Likely pathogenic |
Inborn genetic diseases|Baraitser-winter syndrome 2|Neurodevelopmental delay [MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0013812,MedGen:C3281235,OMIM:614583,Orphanet:2995|Human Phenotype Ontology:HP:0012758,MedGen:C4022738] |
|
rs1555666715
|
Likely pathogenic |
Rare genetic deafness|Baraitser-winter syndrome 2|Baraitser-winter syndrome 2 [MedGen:C5680250,Orphanet:96210|MONDO:MONDO:0013812,MedGen:C3281235,OMIM:614583,Orphanet:2995|MONDO:MONDO:0013812,MedGen:C3281235,OMIM:614583,Orphanet:2995]; Autosomal dominant nonsyndromic hearing loss 20 [MONDO:MONDO:0011480,MedGen:C1858172,OMIM:604717,Orphanet:90635] |
|
rs1555690779
|
LP/P |
Neurodevelopmental disorder with ataxic gait, absent speech, and decreased cortical white matter (NDAGSCW) [MIM:617807] |
|
rs1555690804
|
LP/P |
Neurodevelopmental disorder with ataxic gait, absent speech, and decreased cortical white matter (NDAGSCW) [MIM:617807] |
|
rs1555695342
|
Pathogenic/Likely pathogenic |
not provided|Lactic acidosis|Mitochondrial complex V (ATP synthase) deficiency, nuclear type 4A [MedGen:C3661900|Human Phenotype Ontology:HP:0003128,Human Phenotype Ontology:HP:0003255,Human Phenotype Ontology:HP:0005960,MONDO:MONDO:0006040,MedGen:C0001125|MONDO:MONDO:0957254,MedGen:C5830480,OMIM:620358] |
|
rs1555702147
|
Pathogenic |
Lobular capillary hemangiomas|Capillary malformation|Segmental undergrowth associated with capillary malformation|CLOVES syndrome|not provided [|Human Phenotype Ontology:HP:0025104,MONDO:MONDO:0016231,MedGen:C0340803,Orphanet:211247||MONDO:MONDO:0013038,MedGen:C2752042,OMIM:612918,Orphanet:140944|MedGen:C3661900] |
|
rs1555891584
|
Pathogenic |
Pseudohypoparathyroidism type I A [MONDO:MONDO:0007078,MedGen:C3494506,OMIM:103580,Orphanet:79443] |
|
rs1555953548
|
Pathogenic/Likely pathogenic |
Inborn genetic diseases|Intellectual disability, X-linked 102|not provided [MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0010497,MedGen:C5393299,OMIM:300958,Orphanet:457260|MedGen:C3661900] |
|
rs1555954105
|
Pathogenic |
Intellectual disability, X-linked 102 [MONDO:MONDO:0010497,MedGen:C5393299,OMIM:300958,Orphanet:457260] |
|
rs1558081384
|
Likely pathogenic |
Actin accumulation myopathy [MONDO:MONDO:0008070,MedGen:C3711389,OMIM:161800,Orphanet:98904] |
|
rs1558112580
|
- |
- |
|
rs1562907873
|
Pathogenic |
Cystic fibrosis [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586] |
|
rs1564328617
|
Likely pathogenic |
Developmental and epileptic encephalopathy, 31|Inborn genetic diseases [MONDO:MONDO:0014598,MedGen:C4225357,OMIM:616346,Orphanet:2382|MeSH:D030342,MedGen:C0950123] |
|
rs1565627526
|
Pathogenic/Likely pathogenic |
Tubulinopathy|Lissencephaly due to TUBA1A mutation [MONDO:MONDO:0100153,MedGen:CN850169|MONDO:MONDO:0012703,MedGen:C4305153,OMIM:611603,Orphanet:171680] |
|
rs1568018697
|
Pathogenic; association |
Intellectual disability [Human Phenotype Ontology:HP:0000730,Human Phenotype Ontology:HP:0001249,Human Phenotype Ontology:HP:0001267,Human Phenotype Ontology:HP:0001286,Human Phenotype Ontology:HP:0002122,Human Phenotype Ontology:HP:0002192,Human Phenotype Ontology:HP:0002316,Human Phenotype Ontology:HP:0002382,Human Phenotype Ontology:HP:0002386,Human Phenotype Ontology:HP:0002402,Human Phenotype Ontology:HP:0002458,Human Phenotype Ontology:HP:0002482,Human Phenotype Ontology:HP:0002499,Human Phenotype Ontology:HP:0002543,Human Phenotype Ontology:HP:0003767,Human Phenotype Ontology:HP:0006833,Human Phenotype Ontology:HP:0007154,Human Phenotype Ontology:HP:0007176,Human Phenotype Ontology:HP:0007180,MONDO:MONDO:0001071,MeSH:D008607,MedGen:C3714756]; Abnormal brain morphology|Neurodevelopmental disorder with structural brain anomalies and dysmorphic facies [Human Phenotype Ontology:HP:0012443,MedGen:C4021085|MONDO:MONDO:0032820,MedGen:C5231416,OMIM:618577] |
|
rs1568409626
|
Likely pathogenic |
Hypomyelinating leukodystrophy 6 [MONDO:MONDO:0012905,MedGen:C2676244,OMIM:612438,Orphanet:139441] |
|
rs1569240005
|
Pathogenic |
Intellectual disability, X-linked 102 [MONDO:MONDO:0010497,MedGen:C5393299,OMIM:300958,Orphanet:457260]; Cerebellar vermis hypoplasia|Congenital cerebellar hypoplasia|not provided [Human Phenotype Ontology:HP:0001320,MedGen:C1840379|MONDO:MONDO:0008939,MedGen:C5231391,OMIM:213000,Orphanet:1398,Orphanet:2246|MedGen:CN517202] |
|
rs1571893319
|
Pathogenic |
Actin accumulation myopathy [MONDO:MONDO:0008070,MedGen:C3711389,OMIM:161800,Orphanet:98904] |
|
rs1571893383
|
Pathogenic |
Actin accumulation myopathy [MONDO:MONDO:0008070,MedGen:C3711389,OMIM:161800,Orphanet:98904] |
|
rs1581526962
|
Pathogenic |
Complex cortical dysplasia with other brain malformations 7|not provided [MONDO:MONDO:0012399,MedGen:C3552236,OMIM:610031,Orphanet:300573|MedGen:CN517202] |
|
rs1584261979
|
Pathogenic |
Baraitser-Winter syndrome 1 [MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995] |
|
rs1584793633
|
Likely pathogenic |
Cystic fibrosis [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586] |
|
rs1588270347
|
Likely pathogenic |
Oocyte maturation defect 2 [MONDO:MONDO:0021573,MedGen:C4225210,OMIM:616780] |
|
rs1589387419
|
Likely pathogenic |
Adenosine kinase deficiency [MONDO:MONDO:0100255,MedGen:C4706555,OMIM:614300,Orphanet:289290,Orphanet:88616] |
|
rs1589590737
|
Pathogenic/Likely pathogenic |
Syndromic retinitis pigmentosa|Microcephaly with or without chorioretinopathy, lymphedema, or intellectual disability [MedGen:C5680332,Orphanet:98661|MONDO:MONDO:0007918,MedGen:C1835265,OMIM:152950,Orphanet:2526] |
|
rs1589792804
|
Likely pathogenic |
Costello syndrome [MONDO:MONDO:0009026,MedGen:C0587248,OMIM:218040,Orphanet:3071] |
|
rs1594422676
|
LP/P |
Neuronopathy, distal hereditary motor, 6 (HMN6) [MIM:604320] |
|
rs1594427504
|
Likely pathogenic |
not provided|Purine-nucleoside phosphorylase deficiency [MedGen:CN517202|MONDO:MONDO:0013171,MedGen:C0268125,OMIM:613179,Orphanet:760] |
|
rs1596232266
|
Pathogenic |
Bloom syndrome|Hereditary cancer-predisposing syndrome [MONDO:MONDO:0008876,MedGen:C0005859,OMIM:210900,Orphanet:125|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] |
|
rs1598551290
|
Pathogenic/Likely pathogenic |
Autosomal dominant nonsyndromic hearing loss 20|not provided|Autosomal dominant nonsyndromic hearing loss 20 [MONDO:MONDO:0011480,MedGen:C1858172,OMIM:604717,Orphanet:90635|MedGen:C3661900|MONDO:MONDO:0011480,MedGen:C1858172,OMIM:604717,Orphanet:90635]; Baraitser-winter syndrome 2 [MONDO:MONDO:0013812,MedGen:C3281235,OMIM:614583,Orphanet:2995] |
|
rs1600509558
|
Likely pathogenic |
Developmental and epileptic encephalopathy, 35 [MONDO:MONDO:0014719,MedGen:C4225256,OMIM:616647,Orphanet:457375] |
|
rs1601552154
|
Pathogenic |
Adenylosuccinate lyase deficiency [MONDO:MONDO:0007068,MedGen:C0268126,OMIM:103050,Orphanet:46] |
|
rs1601586359
|
Pathogenic/Likely pathogenic |
Adenylosuccinate lyase deficiency [MONDO:MONDO:0007068,MedGen:C0268126,OMIM:103050,Orphanet:46] |
|
rs1651731153
|
Pathogenic |
not provided|Familial hemiplegic migraine [MedGen:C3661900|MONDO:MONDO:0000700,MedGen:C0338484,OMIM:PS141500] |
|
rs1659986226
|
Pathogenic |
Actin accumulation myopathy [MONDO:MONDO:0008070,MedGen:C3711389,OMIM:161800,Orphanet:98904] |
|
rs1757276859
|
Likely pathogenic |
Complex cortical dysplasia with other brain malformations 7 [MONDO:MONDO:0012399,MedGen:C3552236,OMIM:610031,Orphanet:300573] |
|
rs1757279879
|
Likely pathogenic |
Lissencephaly [Human Phenotype Ontology:HP:0001339,Human Phenotype Ontology:HP:0002537,MONDO:MONDO:0018838,MedGen:C0266463,OMIM:PS607432,Orphanet:48471] |
|
rs1776147010
|
Likely pathogenic |
Multiple benign circumferential skin creases on limbs 1 [MONDO:MONDO:0020738,MedGen:C4551592,OMIM:156610] |
|
rs1784814961
|
Likely pathogenic |
Baraitser-Winter syndrome 1 [MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995] |
|
rs1784829872
|
Likely pathogenic |
Baraitser-Winter syndrome 1|not provided [MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995|MedGen:CN517202] |
|
rs17851045
|
US |
Lung carcinoma |
|
rs17851045
|
Pathogenic/Likely pathogenic |
Lung adenocarcinoma|B-cell chronic lymphocytic leukemia|Transitional cell carcinoma of the bladder|Pancreatic adenocarcinoma|Squamous cell lung carcinoma|Multiple myeloma|Acute myeloid leukemia|Neoplasm of the large intestine|Malignant melanoma of skin|Thyroid tumor|Hepatocellular carcinoma|Malignant neoplasm of body of uterus|Gastric adenocarcinoma|Cerebral arteriovenous malformation|Non-small cell lung carcinoma [Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MedGen:C0153574|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0002408,MONDO:MONDO:0007154,MedGen:C0917804,OMIM:108010,Orphanet:46724|Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131] |
|
rs1788434338
|
Likely pathogenic |
Neurodevelopmental disorder|Neurodevelopmental disorder with hypotonia, impaired speech, and behavioral abnormalities [MONDO:MONDO:0700092,MeSH:D065886,MedGen:C1535926|MONDO:MONDO:0859243,MedGen:C5676975,OMIM:619854] |
|
rs1788864590
|
Pathogenic |
not provided|Neurodevelopmental disorder with hypotonia, impaired speech, and behavioral abnormalities [MedGen:C3661900|MONDO:MONDO:0859243,MedGen:C5676975,OMIM:619854] |
|
rs1799216615
|
Likely pathogenic |
Cystic fibrosis [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586] |
|
rs1800089
|
LB/B |
- |
|
rs1828723406
|
US |
Inclusion body myopathy with early-onset Paget disease with or without frontotemporal dementia 1 (IBMPFD1) [MIM:167320] |
|
rs1833622746
|
Likely pathogenic |
Developmental and epileptic encephalopathy, 31 [MONDO:MONDO:0014598,MedGen:C4225357,OMIM:616346,Orphanet:2382] |
|
rs1834382153
|
Likely pathogenic |
Oocyte maturation defect 2 [MONDO:MONDO:0021573,MedGen:C4225210,OMIM:616780] |
|
rs1834792032
|
Likely pathogenic |
Developmental and epileptic encephalopathy, 31 [MONDO:MONDO:0014598,MedGen:C4225357,OMIM:616346,Orphanet:2382] |
|
rs183618664
|
- |
- |
|
rs1844517913
|
Likely pathogenic |
Microcephaly with or without chorioretinopathy, lymphedema, or intellectual disability [MONDO:MONDO:0007918,MedGen:C1835265,OMIM:152950,Orphanet:2526] |
|
rs188888716
|
- |
- |
|
rs1891497352
|
Pathogenic |
Myopathy, distal, 5 [MONDO:MONDO:0014877,MedGen:C5567521,OMIM:617030,Orphanet:482601] |
|
rs1896092339
|
Pathogenic |
Bloom syndrome [MONDO:MONDO:0008876,MedGen:C0005859,OMIM:210900,Orphanet:125] |
|
rs1909055807
|
LP/P |
Adenine phosphoribosyltransferase deficiency (APRTD) [MIM:614723] |
|
rs1909056519
|
Likely pathogenic |
Adenine phosphoribosyltransferase deficiency [MONDO:MONDO:0013869,MedGen:C0268120,OMIM:614723,Orphanet:976] |
|
rs1909057323
|
Pathogenic |
Adenine phosphoribosyltransferase deficiency [MONDO:MONDO:0013869,MedGen:C0268120,OMIM:614723,Orphanet:976] |
|
rs1909078308
|
Pathogenic |
Adenine phosphoribosyltransferase deficiency [MONDO:MONDO:0013869,MedGen:C0268120,OMIM:614723,Orphanet:976] |
|
rs1909147057
|
Pathogenic |
Adenine phosphoribosyltransferase deficiency [MONDO:MONDO:0013869,MedGen:C0268120,OMIM:614723,Orphanet:976] |
|
rs1909160707
|
Likely pathogenic |
Adenine phosphoribosyltransferase deficiency [MONDO:MONDO:0013869,MedGen:C0268120,OMIM:614723,Orphanet:976] |
|
rs192831239
|
US |
Phosphoribosylaminoimidazole carboxylase deficiency (PAICSD) [MIM:619859] |
|
rs193922500
|
Pathogenic |
Cystic fibrosis|Hereditary pancreatitis [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586|MONDO:MONDO:0008185,MedGen:C0238339,OMIM:167800,Orphanet:676]; Cystic fibrosis [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586]; Bronchiectasis with or without elevated sweat chloride 1 [MONDO:MONDO:0008887,MedGen:C2749757,OMIM:211400,Orphanet:60033]; Congenital bilateral aplasia of vas deferens from CFTR mutation|Cystic fibrosis [MONDO:MONDO:0010178,MedGen:C0403814,OMIM:277180,Orphanet:48|MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586]; Congenital bilateral aplasia of vas deferens from CFTR mutation|CFTR-related disorders [MONDO:MONDO:0010178,MedGen:C0403814,OMIM:277180,Orphanet:48|]; Cystic fibrosis|not provided|not specified|Congenital bilateral aplasia of vas deferens from CFTR mutation|Bronchiectasis with or without elevated sweat chloride 1 [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586|MedGen:C3661900|MedGen:CN169374|MONDO:MONDO:0010178,MedGen:C0403814,OMIM:277180,Orphanet:48|MONDO:MONDO:0008887,MedGen:C2749757,OMIM:211400,Orphanet:60033] |
|
rs1942171146
|
Likely pathogenic |
Lissencephaly due to TUBA1A mutation [MONDO:MONDO:0012703,MedGen:C4305153,OMIM:611603,Orphanet:171680] |
|
rs1942187200
|
Likely pathogenic |
Lissencephaly due to TUBA1A mutation [MONDO:MONDO:0012703,MedGen:C4305153,OMIM:611603,Orphanet:171680] |
|
rs1952694899
|
Pathogenic |
Encephalopathy, lethal, due to defective mitochondrial peroxisomal fission 1 [MONDO:MONDO:0013726,MedGen:C3280660,OMIM:614388,Orphanet:330050] |
|
rs199531230
|
- |
- |
|
rs199532729
|
- |
- |
|
rs199761904
|
- |
- |
|
rs199897325
|
- |
- |
|
rs199973851
|
- |
- |
|
rs200010374
|
- |
- |
|
rs200086262
|
Pathogenic |
Developmental and epileptic encephalopathy, 35|Inosine triphosphatase deficiency|not provided [MONDO:MONDO:0014719,MedGen:C4225256,OMIM:616647,Orphanet:457375|MONDO:MONDO:0013461,MedGen:C0342800,OMIM:613850|MedGen:C3661900] |
|
rs200185120
|
- |
- |
|
rs200204024
|
- |
- |
|
rs200637968
|
- |
- |
|
rs200790521
|
- |
- |
|
rs200913020
|
- |
- |
|
rs200971951
|
- |
- |
|
rs201283535
|
- |
- |
|
rs201354416
|
- |
- |
|
rs201461737
|
- |
- |
|
rs201477144
|
- |
- |
|
rs201823652
|
Pathogenic |
Actin accumulation myopathy [MONDO:MONDO:0008070,MedGen:C3711389,OMIM:161800,Orphanet:98904] |
|
rs201849671
|
- |
- |
|
rs202092105
|
- |
- |
|
rs202097988
|
- |
- |
|
rs2031759596
|
Pathogenic |
Microcephaly|Baraitser-winter syndrome 2 [Human Phenotype Ontology:HP:0000252,Human Phenotype Ontology:HP:0001366,Human Phenotype Ontology:HP:0005485,Human Phenotype Ontology:HP:0005489,Human Phenotype Ontology:HP:0005497,MONDO:MONDO:0001149,MedGen:C4551563|MONDO:MONDO:0013812,MedGen:C3281235,OMIM:614583,Orphanet:2995] |
|
rs2043431490
|
Likely pathogenic |
Neurodevelopmental disorder with structural brain anomalies and dysmorphic facies [MONDO:MONDO:0032820,MedGen:C5231416,OMIM:618577] |
|
rs2063875155
|
Likely pathogenic |
Intellectual disability, X-linked 102 [MONDO:MONDO:0010497,MedGen:C5393299,OMIM:300958,Orphanet:457260] |
|
rs2063876594
|
Pathogenic |
Intellectual disability, X-linked 102 [MONDO:MONDO:0010497,MedGen:C5393299,OMIM:300958,Orphanet:457260] |
|
rs2063908570
|
Pathogenic |
Intellectual disability, X-linked 102 [MONDO:MONDO:0010497,MedGen:C5393299,OMIM:300958,Orphanet:457260] |
|
rs2063927503
|
Pathogenic |
Intellectual disability, X-linked 102 [MONDO:MONDO:0010497,MedGen:C5393299,OMIM:300958,Orphanet:457260] |
|
rs2101738598
|
Likely pathogenic |
Noonan syndrome 6 [MONDO:MONDO:0013186,MedGen:C2750732,OMIM:613224,Orphanet:648] |
|
rs2101742052
|
Pathogenic/Likely pathogenic |
RASopathy|Noonan syndrome and Noonan-related syndrome|not provided|Colorectal cancer|Noonan syndrome 1 [MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391|MONDO:MONDO:0020297,MedGen:C5681679,Orphanet:98733|MedGen:C3661900|MONDO:MONDO:0005575,MedGen:C0346629,OMIM:114500|MONDO:MONDO:0008104,MedGen:C4551602,OMIM:163950,Orphanet:648] |
|
rs2101743991
|
Likely pathogenic |
Noonan syndrome 6 [MONDO:MONDO:0013186,MedGen:C2750732,OMIM:613224,Orphanet:648] |
|
rs2101989829
|
Pathogenic |
Familial hemiplegic migraine [MONDO:MONDO:0000700,MedGen:C0338484,OMIM:PS141500] |
|
rs2102735904
|
Likely pathogenic |
Actin accumulation myopathy [MONDO:MONDO:0008070,MedGen:C3711389,OMIM:161800,Orphanet:98904] |
|
rs2102736408
|
Pathogenic |
Actin accumulation myopathy [MONDO:MONDO:0008070,MedGen:C3711389,OMIM:161800,Orphanet:98904] |
|
rs2109133174
|
Pathogenic |
Retinitis pigmentosa 40 [MONDO:MONDO:0013429,MedGen:C3151107,OMIM:613801,Orphanet:791] |
|
rs2113785156
|
Likely pathogenic |
not provided|Complex cortical dysplasia with other brain malformations 5 [MedGen:C3661900|MONDO:MONDO:0014337,MedGen:C3810407,OMIM:615763] |
|
rs2115712676
|
Pathogenic |
Neurodevelopmental disorder with hypotonia, impaired speech, and behavioral abnormalities [MONDO:MONDO:0859243,MedGen:C5676975,OMIM:619854] |
|
rs2115712712
|
Pathogenic |
Neurodevelopmental disorder with hypotonia, impaired speech, and behavioral abnormalities [MONDO:MONDO:0859243,MedGen:C5676975,OMIM:619854] |
|
rs2116052322
|
Likely pathogenic |
Neurodevelopmental disorder with hypotonia, impaired speech, and behavioral abnormalities [MONDO:MONDO:0859243,MedGen:C5676975,OMIM:619854] |
|
rs2118276763
|
Pathogenic/Likely pathogenic |
not provided|Sturge-Weber syndrome [MedGen:C3661900|MONDO:MONDO:0008501,MedGen:C0038505,OMIM:185300,Orphanet:3205] |
|
rs2118444312
|
Pathogenic |
Familial multiple nevi flammei|not provided [MONDO:MONDO:0008094,MedGen:C2931029,OMIM:163000,Orphanet:624|MedGen:C3661900] |
|
rs2121244643
|
Likely pathogenic |
Lissencephaly due to TUBA1A mutation [MONDO:MONDO:0012703,MedGen:C4305153,OMIM:611603,Orphanet:171680] |
|
rs2121245032
|
Pathogenic |
Lissencephaly due to TUBA1A mutation [MONDO:MONDO:0012703,MedGen:C4305153,OMIM:611603,Orphanet:171680] |
|
rs2122346498
|
Pathogenic/Likely pathogenic |
Inosine triphosphatase deficiency|Infantile epileptic dyskinetic encephalopathy [MONDO:MONDO:0013461,MedGen:C0342800,OMIM:613850|MONDO:MONDO:0018226,MedGen:C4552072,Orphanet:364063] |
|
rs2124291450
|
Pathogenic |
Partial hypoxanthine-guanine phosphoribosyltransferase deficiency [MONDO:MONDO:0010299,MedGen:C0268117,OMIM:300323,Orphanet:79233]; Lesch-Nyhan syndrome [MONDO:MONDO:0010298,MedGen:C0023374,OMIM:300322,Orphanet:510] |
|
rs2124302024
|
Pathogenic |
Partial hypoxanthine-guanine phosphoribosyltransferase deficiency [MONDO:MONDO:0010299,MedGen:C0268117,OMIM:300323,Orphanet:79233]; Lesch-Nyhan syndrome [MONDO:MONDO:0010298,MedGen:C0023374,OMIM:300322,Orphanet:510] |
|
rs2133273980
|
Likely pathogenic |
Aortic aneurysm, familial thoracic 6 [MONDO:MONDO:0012730,MedGen:C2673186,OMIM:611788] |
|
rs2135806030
|
Pathogenic |
Noonan syndrome 3 [MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648] |
|
rs2137302207
|
Pathogenic |
Encephalopathy, lethal, due to defective mitochondrial peroxisomal fission 1 [MONDO:MONDO:0013726,MedGen:C3280660,OMIM:614388,Orphanet:330050] |
|
rs2141505552
|
Likely pathogenic |
Thyroid cancer, nonmedullary, 1 [MONDO:MONDO:0008567,MedGen:C4721429,OMIM:188550] |
|
rs2145244734
|
Likely pathogenic |
Hypomyelinating leukodystrophy 6 [MONDO:MONDO:0012905,MedGen:C2676244,OMIM:612438,Orphanet:139441] |
|
rs2145971509
|
Pathogenic |
Dystonia 12 [MONDO:MONDO:0007496,MedGen:C1868681,OMIM:128235,Orphanet:71517] |
|
rs2146005656
|
Likely pathogenic |
Pseudohypoparathyroidism type I A [MONDO:MONDO:0007078,MedGen:C3494506,OMIM:103580,Orphanet:79443] |
|
rs2146270332
|
Pathogenic |
Pseudohypoparathyroidism type I A [MONDO:MONDO:0007078,MedGen:C3494506,OMIM:103580,Orphanet:79443] |
|
rs2146278555
|
Pathogenic/Likely pathogenic |
Pseudohypoparathyroidism type I A|not provided [MONDO:MONDO:0007078,MedGen:C3494506,OMIM:103580,Orphanet:79443|MedGen:C3661900] |
|
rs2146285582
|
Pathogenic/Likely pathogenic |
not provided|Pseudohypoparathyroidism type I A [MedGen:C3661900|MONDO:MONDO:0007078,MedGen:C3494506,OMIM:103580,Orphanet:79443] |
|
rs2146377060
|
Pathogenic |
Macrothrombocytopenia and granulocyte inclusions with or without nephritis or sensorineural hearing loss [MONDO:MONDO:0015912,MedGen:C5200934,OMIM:155100,Orphanet:182050] |
|
rs2146658733
|
Pathogenic |
Adenylosuccinate lyase deficiency [MONDO:MONDO:0007068,MedGen:C0268126,OMIM:103050,Orphanet:46] |
|
rs2147353543
|
Pathogenic |
not provided|Intellectual disability, X-linked 102 [MedGen:C3661900|MONDO:MONDO:0010497,MedGen:C5393299,OMIM:300958,Orphanet:457260] |
|
rs2147682409
|
Likely pathogenic |
Charcot-Marie-Tooth Neuropathy X|Charcot-Marie-Tooth disease X-linked recessive 5|not provided [MedGen:CN118851|MONDO:MONDO:0010699,MedGen:C1839566,OMIM:311070,Orphanet:99014|MedGen:C3661900] |
|
rs2149109587
|
Pathogenic |
Cutis laxa, X-linked [MONDO:MONDO:0010572,MedGen:C0268353,OMIM:304150,Orphanet:198]; X-linked distal spinal muscular atrophy type 3 [MONDO:MONDO:0010338,MedGen:C1845359,OMIM:300489,Orphanet:139557]; Menkes kinky-hair syndrome|Menkes kinky-hair syndrome [MONDO:MONDO:0010651,MedGen:C0022716,OMIM:309400,Orphanet:565|MONDO:MONDO:0010651,MedGen:C0022716,OMIM:309400,Orphanet:565] |
|
rs2151162501
|
Pathogenic |
Bloom syndrome [MONDO:MONDO:0008876,MedGen:C0005859,OMIM:210900,Orphanet:125] |
|
rs2372536
|
- |
- |
|
rs2672150
|
- |
- |
|
rs267606635
|
US |
Severe combined immunodeficiency autosomal recessive T-cell-negative/B-cell-negative/NK-cell-negative due to adenosine deaminase deficiency (ADASCID) [MIM:102700] |
|
rs267606699
|
LP/P |
Desbuquois dysplasia 1 (DBQD1) [MIM:251450] |
|
rs267606700
|
- |
- |
|
rs267606700
|
LP/P |
Desbuquois dysplasia 1 (DBQD1) [MIM:251450] |
|
rs267606701
|
LP/P |
Desbuquois dysplasia 1 (DBQD1) [MIM:251450] |
|
rs267606863
|
LP/P |
Lesch-Nyhan syndrome (LNS) [MIM:300322] |
|
rs267606920
|
LP/P |
Noonan syndrome 6 (NS6) [MIM:613224] |
|
rs267606920
|
Pathogenic |
Noonan syndrome 6|not provided|Noonan syndrome 1|RASopathy|NRAS-related condition [MONDO:MONDO:0013186,MedGen:C2750732,OMIM:613224,Orphanet:648|MedGen:C3661900|MONDO:MONDO:0008104,MedGen:C4551602,OMIM:163950,Orphanet:648|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391|] |
|
rs281875326
|
Pathogenic |
Baraitser-winter syndrome 2|not provided|Congenital anomaly of kidney and urinary tract|Inborn genetic diseases [MONDO:MONDO:0013812,MedGen:C3281235,OMIM:614583,Orphanet:2995|MedGen:CN517202|MONDO:MONDO:0019719,MeSH:C566906,MedGen:C1968949,OMIM:PS610805,Orphanet:93545|MeSH:D030342,MedGen:C0950123] |
|
rs281875331
|
Pathogenic |
Baraitser-Winter syndrome 1|not provided [MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995|MedGen:CN517202] |
|
rs28933401
|
Likely pathogenic |
Migraine, familial hemiplegic, 2|not provided [MONDO:MONDO:0011232,MedGen:C1865322,OMIM:602481,Orphanet:569|MedGen:C3661900] |
|
rs28933406
|
Likely pathogenic |
B-cell chronic lymphocytic leukemia|Malignant melanoma of skin|Pancreatic adenocarcinoma|Thyroid tumor|Hepatocellular carcinoma|Gastric adenocarcinoma|Squamous cell lung carcinoma|Transitional cell carcinoma of the bladder|Acute myeloid leukemia|Neoplasm of the large intestine|Malignant neoplasm of body of uterus|Multiple myeloma|Lung adenocarcinoma [Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MedGen:C0153574|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013] |
|
rs28933406
|
LP/P |
Thyroid cancer, non-medullary, 2 (NMTC2) [MIM:188470] |
|
rs28933406
|
Pathogenic/Likely pathogenic |
Thyroid cancer, nonmedullary, 2|Spermatocytic seminoma|Breast neoplasm|Noonan syndrome 3|not provided|Lip and oral cavity carcinoma [MONDO:MONDO:0008566,MedGen:C4225426,OMIM:188470|MONDO:MONDO:0020513,MedGen:C0334517,Orphanet:99865|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648|MedGen:CN517202|MONDO:MONDO:0023644,MedGen:C0220641] |
|
rs28939082
|
LP/P |
Optic atrophy 1 (OPA1) [MIM:165500] |
|
rs28999113
|
- |
- |
|
rs28999113
|
LP/P |
Adenine phosphoribosyltransferase deficiency (APRTD) [MIM:614723] |
|
rs3169258
|
Pathogenic |
Adenine phosphoribosyltransferase deficiency [MONDO:MONDO:0013869,MedGen:C0268120,OMIM:614723,Orphanet:976] |
|
rs34082669
|
LB/B |
- |
|
rs34354104
|
LB/B |
- |
|
rs35698797
|
LB/B |
- |
|
rs367543028
|
Pathogenic |
Bloom syndrome|not provided|Hereditary cancer-predisposing syndrome [MONDO:MONDO:0008876,MedGen:C0005859,OMIM:210900,Orphanet:125|MedGen:C3661900|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] |
|
rs367637749
|
- |
- |
|
rs368366043
|
- |
- |
|
rs368548274
|
- |
- |
|
rs369010777
|
- |
- |
|
rs369323241
|
- |
- |
|
rs369522795
|
- |
- |
|
rs369643556
|
- |
- |
|
rs369681854
|
Pathogenic |
Adenine phosphoribosyltransferase deficiency [MONDO:MONDO:0013869,MedGen:C0268120,OMIM:614723,Orphanet:976] |
|
rs370539470
|
- |
- |
|
rs371090069
|
- |
- |
|
rs372270451
|
- |
- |
|
rs372290095
|
Pathogenic |
Pseudohypoparathyroidism type I A|not provided [MONDO:MONDO:0007078,MedGen:C3494506,OMIM:103580,Orphanet:79443|MedGen:C3661900] |
|
rs372332465
|
- |
- |
|
rs372401715
|
- |
- |
|
rs372912506
|
- |
- |
|
rs373442940
|
- |
- |
|
rs373458753
|
LP/P |
Adenylosuccinase deficiency (ADSLD) [MIM:103050] |
|
rs373875697
|
- |
- |
|
rs374259530
|
Pathogenic |
not provided|Adenylosuccinate lyase deficiency|Generalized myoclonic seizure [MedGen:C3661900|MONDO:MONDO:0007068,MedGen:C0268126,OMIM:103050,Orphanet:46|Human Phenotype Ontology:HP:0002123,Human Phenotype Ontology:HP:0006869,Human Phenotype Ontology:HP:0006902,Human Phenotype Ontology:HP:0007075,Human Phenotype Ontology:HP:0007202,Human Phenotype Ontology:HP:0007284,Human Phenotype Ontology:HP:0007294,MedGen:C4021759]; Difficulty standing [Human Phenotype Ontology:HP:0003698,MedGen:C0241237]; Progressive neurologic deterioration [Human Phenotype Ontology:HP:0002344,MedGen:C1854838]; Severe global developmental delay [Human Phenotype Ontology:HP:0011344,MedGen:C1837397]; Inability to walk|Inborn genetic diseases [Human Phenotype Ontology:HP:0002540,MedGen:C0560046|MeSH:D030342,MedGen:C0950123] |
|
rs375997993
|
- |
- |
|
rs376698630
|
- |
- |
|
rs376788669
|
- |
- |
|
rs377159042
|
- |
- |
|
rs3863907
|
- |
- |
|
rs387906643
|
LP/P |
Microcephaly with or without chorioretinopathy, lymphedema, or impaired intellectual development (MCLMR) [MIM:152950] |
|
rs387907178
|
Pathogenic |
Auriculocondylar syndrome 1 [MONDO:MONDO:0011234,MedGen:C4551996,OMIM:602483,Orphanet:137888] |
|
rs387907206
|
LP/P |
Cardiofaciocutaneous syndrome 2 (CFC2) [MIM:615278] |
|
rs397508174
|
Pathogenic |
Cystic fibrosis|CFTR-related disorders [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586|] |
|
rs397508175
|
Pathogenic |
Cystic fibrosis|CFTR-related disorders [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586|] |
|
rs397508195
|
LP/P |
Cystic fibrosis (CF) [MIM:219700] |
|
rs397508198
|
Pathogenic/Likely pathogenic |
Cystic fibrosis|Hereditary pancreatitis|not provided [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586|MONDO:MONDO:0008185,MedGen:C0238339,OMIM:167800,Orphanet:676|MedGen:CN517202] |
|
rs397508214
|
Likely pathogenic |
Cystic fibrosis [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586] |
|
rs397508282
|
LP/P |
Cystic fibrosis (CF) [MIM:219700] |
|
rs397508288
|
LP/P |
Cystic fibrosis (CF) [MIM:219700] |
|
rs397508313
|
LP/P |
Cystic fibrosis (CF) [MIM:219700] |
|
rs397514452
|
LP/P |
Hypermethioninemia due to adenosine kinase deficiency (HMAKD) [MIM:614300] |
|
rs397514454
|
LP/P |
Hypermethioninemia due to adenosine kinase deficiency (HMAKD) [MIM:614300] |
|
rs397514469
|
LP/P |
Acrodysostosis 2, with or without hormone resistance (ACRDYS2) [MIM:614613] |
|
rs397514553
|
LP/P |
Keratinocytic non-epidermolytic nevus (KNEN) [MIM:162900] |
|
rs397514553
|
Pathogenic |
Epidermal nevus|Noonan syndrome 1 [Human Phenotype Ontology:HP:0010816,MONDO:MONDO:0008093,MedGen:C0334082,OMIM:162900,Orphanet:79414|MONDO:MONDO:0008104,MedGen:C4551602,OMIM:163950,Orphanet:648] |
|
rs397514698
|
Pathogenic/Likely pathogenic |
Capillary malformation|Sturge-Weber syndrome|Capillary malformation [Human Phenotype Ontology:HP:0025104,MONDO:MONDO:0016231,MedGen:C0340803,Orphanet:211247|MONDO:MONDO:0008501,MedGen:C0038505,OMIM:185300,Orphanet:3205|Human Phenotype Ontology:HP:0025104,MONDO:MONDO:0016231,MedGen:C0340803,Orphanet:211247]; Sturge-Weber syndrome|Hemangiomatosis|Angioosteohypertrophic syndrome|Segmental undergrowth associated with capillary malformation|not provided|Familial multiple nevi flammei|Melanoma [MONDO:MONDO:0008501,MedGen:C0038505,OMIM:185300,Orphanet:3205|Human Phenotype Ontology:HP:0007461,MedGen:C1384590|MONDO:MONDO:0007864,MedGen:C0022739,OMIM:149000,Orphanet:2346||MedGen:C3661900|MONDO:MONDO:0008094,MedGen:C2931029,OMIM:163000,Orphanet:624|Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202] |
|
rs397514768
|
Pathogenic |
Auriculocondylar syndrome 1 [MONDO:MONDO:0011234,MedGen:C4551996,OMIM:602483,Orphanet:137888] |
|
rs397515577
|
Likely pathogenic |
Dystonia 12 [MONDO:MONDO:0007496,MedGen:C1868681,OMIM:128235,Orphanet:71517] |
|
rs397516685
|
Pathogenic/Likely pathogenic |
Familial thoracic aortic aneurysm and aortic dissection|not provided|Aortic aneurysm, familial thoracic 6|ACTA2-Related Disorders|Isolated thoracic aortic aneurysm [MONDO:MONDO:0019625,MedGen:C4707243,OMIM:PS607086,Orphanet:91387|MedGen:C3661900|MONDO:MONDO:0012730,MedGen:C2673186,OMIM:611788||] |
|
rs397517040
|
Likely pathogenic |
Non-small cell lung carcinoma|not provided|Prostate cancer, hereditary, 1 [Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|MedGen:CN517202|MONDO:MONDO:0011098,MedGen:C4722327,OMIM:601518,Orphanet:1331] |
|
rs397517041
|
Likely pathogenic |
Noonan syndrome [MONDO:MONDO:0018997,MeSH:D009634,MedGen:C0028326,OMIM:PS163950,Orphanet:648] |
|
rs4494683
|
- |
- |
|
rs483352809
|
Pathogenic/Likely pathogenic |
Torsion dystonia 4 [MONDO:MONDO:0007493,MedGen:C1851943,OMIM:128101,Orphanet:98805]; Hypomyelinating leukodystrophy 6|Abnormality of the nervous system|Hypomyelinating leukodystrophy 6|not provided [MONDO:MONDO:0012905,MedGen:C2676244,OMIM:612438,Orphanet:139441|Human Phenotype Ontology:HP:0000707,Human Phenotype Ontology:HP:0001333,Human Phenotype Ontology:HP:0006987,MONDO:MONDO:0002320,MedGen:C0497552|MONDO:MONDO:0012905,MedGen:C2676244,OMIM:612438,Orphanet:139441|MedGen:C3661900] |
|
rs4850168
|
- |
- |
|
rs4850284
|
- |
- |
|
rs527573101
|
- |
- |
|
rs529535145
|
- |
- |
|
rs530783531
|
- |
- |
|
rs532262598
|
- |
- |
|
rs534828213
|
- |
- |
|
rs540403059
|
- |
- |
|
rs540559098
|
- |
- |
|
rs540648461
|
- |
- |
|
rs544321005
|
- |
- |
|
rs548538312
|
- |
- |
|
rs550374458
|
- |
- |
|
rs552264498
|
- |
- |
|
rs552746066
|
- |
- |
|
rs553548999
|
- |
- |
|
rs556944473
|
- |
- |
|
rs559384888
|
- |
- |
|
rs564547553
|
- |
- |
|
rs564873625
|
- |
- |
|
rs574110525
|
- |
- |
|
rs575750582
|
- |
- |
|
rs575921260
|
- |
- |
|
rs577200385
|
- |
- |
|
rs5832
|
LB/B |
- |
|
rs5837
|
LB/B |
- |
|
rs587776983
|
Pathogenic |
Torsion dystonia 4|Hypomyelinating leukodystrophy 6 [MONDO:MONDO:0007493,MedGen:C1851943,OMIM:128101,Orphanet:98805|MONDO:MONDO:0012905,MedGen:C2676244,OMIM:612438,Orphanet:139441] |
|
rs587777173
|
Pathogenic |
Hereditary spastic paraplegia 45|not provided [MONDO:MONDO:0013165,MedGen:C3888209,OMIM:613162,Orphanet:320396|MedGen:C3661900] |
|
rs587777188
|
LP/P |
Acrodysostosis 2, with or without hormone resistance (ACRDYS2) [MIM:614613] |
|
rs587777467
|
Pathogenic |
Hypomyelinating leukodystrophy 6|not provided [MONDO:MONDO:0012905,MedGen:C2676244,OMIM:612438,Orphanet:139441|MedGen:C3661900] |
|
rs587777468
|
Pathogenic |
Hypomyelinating leukodystrophy 6 [MONDO:MONDO:0012905,MedGen:C2676244,OMIM:612438,Orphanet:139441] |
|
rs587777468
|
Pathogenic |
Hypomyelinating leukodystrophy 6|not provided|Torsion dystonia 4 [MONDO:MONDO:0012905,MedGen:C2676244,OMIM:612438,Orphanet:139441|MedGen:CN517202|MONDO:MONDO:0007493,MedGen:C1851943,OMIM:128101,Orphanet:98805] |
|
rs587777861
|
LP/P |
Developmental and epileptic encephalopathy 31A (DEE31A) [MIM:616346] |
|
rs587779770
|
Likely pathogenic |
Baraitser-Winter syndrome 1|not provided [MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995|MedGen:C3661900] |
|
rs587779771
|
Likely pathogenic |
Baraitser-Winter syndrome 1|not provided [MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995|MedGen:CN517202] |
|
rs587779777
|
Pathogenic/Likely pathogenic |
Baraitser-Winter syndrome 1|not provided|ACTB-related BAFopathy|Inborn genetic diseases [MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995|MedGen:C3661900||MeSH:D030342,MedGen:C0950123] |
|
rs587780587
|
Likely pathogenic |
Mitochondrial DNA depletion syndrome 3 (hepatocerebral type) [MONDO:MONDO:0009636,MedGen:C5191055,OMIM:251880,Orphanet:279934] |
|
rs587783037
|
Pathogenic |
Bloom syndrome|Hereditary cancer-predisposing syndrome|not provided [MONDO:MONDO:0008876,MedGen:C0005859,OMIM:210900,Orphanet:125|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MedGen:C3661900] |
|
rs587784495
|
Pathogenic |
Lissencephaly due to TUBA1A mutation|Tubulinopathy [MONDO:MONDO:0012703,MedGen:C4305153,OMIM:611603,Orphanet:171680|MONDO:MONDO:0100153,MedGen:CN850169] |
|
rs62163561
|
- |
- |
|
rs62165871
|
- |
- |
|
rs72554654
|
LP/P |
Menkes disease (MNK) [MIM:309400] |
|
rs72624967
|
- |
- |
|
rs727503093
|
Likely pathogenic |
Non-small cell lung carcinoma|Costello syndrome [Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|MONDO:MONDO:0009026,MedGen:C0587248,OMIM:218040,Orphanet:3071] |
|
rs727503108
|
Pathogenic/Likely pathogenic |
Non-small cell lung carcinoma|Cardio-facio-cutaneous syndrome [Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|MONDO:MONDO:0015280,MedGen:C1275081,OMIM:PS115150,Orphanet:1340]; Noonan syndrome|not provided|RASopathy [MONDO:MONDO:0018997,MeSH:D009634,MedGen:C0028326,OMIM:PS163950,Orphanet:648|MedGen:C3661900|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391] |
|
rs727503109
|
LP/P |
Noonan syndrome 3 (NS3) [MIM:609942] |
|
rs727503109
|
Pathogenic/Likely pathogenic |
RASopathy|not provided|Cardio-facio-cutaneous syndrome [MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391|MedGen:C3661900|MONDO:MONDO:0015280,MedGen:C1275081,OMIM:PS115150,Orphanet:1340]; Noonan syndrome|Cardiofaciocutaneous syndrome 1|Cardiovascular phenotype [MONDO:MONDO:0018997,MeSH:D009634,MedGen:C0028326,OMIM:PS163950,Orphanet:648|MONDO:MONDO:0007265,MedGen:CN029449,OMIM:115150,Orphanet:1340|MedGen:CN230736] |
|
rs727503110
|
LP/P |
Noonan syndrome 3 (NS3) [MIM:609942] |
|
rs727503110
|
Pathogenic |
Noonan syndrome|not provided|RASopathy|not specified|Noonan syndrome 3 [MONDO:MONDO:0018997,MeSH:D009634,MedGen:C0028326,OMIM:PS163950,Orphanet:648|MedGen:C3661900|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391|MedGen:CN169374|MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648]; Cardiofaciocutaneous syndrome 2|Hereditary diffuse gastric adenocarcinoma|Noonan syndrome 3|12 conditions [MONDO:MONDO:0014112,MedGen:C3809005,OMIM:615278,Orphanet:1340|MONDO:MONDO:0007648,MedGen:C1708349,OMIM:137215,Orphanet:26106|MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648|12 conditions] |
|
rs730880029
|
Pathogenic |
Amyotrophic lateral sclerosis type 22 [MONDO:MONDO:0014531,MedGen:C4015512,OMIM:616208,Orphanet:803] |
|
rs730880460
|
Pathogenic |
not provided|Costello syndrome [MedGen:C3661900|MONDO:MONDO:0009026,MedGen:C0587248,OMIM:218040,Orphanet:3071] |
|
rs730880471
|
Likely pathogenic |
not provided|Noonan syndrome 3|Autoimmune lymphoproliferative syndrome type 4 [MedGen:CN517202|MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648|MONDO:MONDO:0013767,MedGen:C2674723,OMIM:614470,Orphanet:268114]; Acute myeloid leukemia [Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519]; Cardiofaciocutaneous syndrome 2 [MONDO:MONDO:0014112,MedGen:C3809005,OMIM:615278,Orphanet:1340]; Noonan syndrome 3|KRAS-related RASopathy [MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648|] |
|
rs730880965
|
Pathogenic/Likely pathogenic |
not provided|Noonan syndrome 6 [MedGen:CN517202|MONDO:MONDO:0013186,MedGen:C2750732,OMIM:613224,Orphanet:648] |
|
rs74315507
|
Pathogenic |
Neutrophil immunodeficiency syndrome [MONDO:MONDO:0011988,MedGen:C1842398,OMIM:608203,Orphanet:183707] |
|
rs745806214
|
- |
- |
|
rs746316064
|
- |
- |
|
rs746699081
|
- |
- |
|
rs747281324
|
LP/P |
Bloom syndrome (BLM) [MIM:210900] |
|
rs747480526
|
Pathogenic/Likely pathogenic |
Complex cortical dysplasia with other brain malformations 1|not provided|Inborn genetic diseases [MONDO:MONDO:0013541,MedGen:C3808397,OMIM:614039,Orphanet:300570|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs747544959
|
- |
- |
|
rs747747667
|
- |
- |
|
rs749042624
|
- |
- |
|
rs749209037
|
- |
- |
|
rs749246739
|
LP/P |
Desbuquois dysplasia 1 (DBQD1) [MIM:251450] |
|
rs749484894
|
Pathogenic/Likely pathogenic |
Severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-negative, NK cell-negative, due to adenosine deaminase deficiency [MONDO:MONDO:0007064,MedGen:C1863236,OMIM:102700,Orphanet:277] |
|
rs749698460
|
- |
- |
|
rs750203790
|
- |
- |
|
rs750918391
|
- |
- |
|
rs752054462
|
- |
- |
|
rs75205792
|
- |
- |
|
rs752127722
|
- |
- |
|
rs752691887
|
- |
- |
|
rs752819438
|
- |
- |
|
rs752868920
|
- |
- |
|
rs753258609
|
- |
- |
|
rs753634322
|
- |
- |
|
rs754337553
|
- |
- |
|
rs754465217
|
- |
- |
|
rs754960642
|
- |
- |
|
rs755051255
|
- |
- |
|
rs755290317
|
- |
- |
|
rs755328446
|
- |
- |
|
rs756206533
|
Pathogenic |
Cystic fibrosis [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586] |
|
rs756572758
|
- |
- |
|
rs757304363
|
- |
- |
|
rs758029716
|
- |
- |
|
rs758907582
|
- |
- |
|
rs759078372
|
- |
- |
|
rs759631177
|
- |
- |
|
rs760270633
|
LP/P |
Developmental and epileptic encephalopathy 31A (DEE31A) [MIM:616346] |
|
rs760967532
|
- |
- |
|
rs760995377
|
Likely pathogenic |
Brody myopathy [MONDO:MONDO:0010977,MedGen:C1832918,OMIM:601003,Orphanet:53347] |
|
rs761020434
|
- |
- |
|
rs761483742
|
- |
- |
|
rs761493155
|
Pathogenic |
not provided|Adenylosuccinate lyase deficiency [MedGen:C3661900|MONDO:MONDO:0007068,MedGen:C0268126,OMIM:103050,Orphanet:46] |
|
rs761592113
|
- |
- |
|
rs762276870
|
- |
- |
|
rs762509151
|
Likely pathogenic |
Adenine phosphoribosyltransferase deficiency [MONDO:MONDO:0013869,MedGen:C0268120,OMIM:614723,Orphanet:976] |
|
rs762550967
|
LP/P |
Progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 4 (PEOB4) [MIM:617070] |
|
rs762589841
|
- |
- |
|
rs763187569
|
- |
- |
|
rs763589704
|
- |
- |
|
rs763615602
|
LP/P |
Portal hypertension, non-cirrhotic, 1 (NCPH1) [MIM:617068] |
|
rs763615602
|
Pathogenic/Likely pathogenic |
Progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 4|Portal hypertension, noncirrhotic|Portal hypertension, noncirrhotic, 1|not provided|Mitochondrial DNA depletion syndrome 3 (hepatocerebral type) [MONDO:MONDO:0014899,MedGen:C4310733,OMIM:617070,Orphanet:329314|MONDO:MONDO:0024193,MedGen:C4310735,OMIM:PS617068|MONDO:MONDO:8000013,MedGen:CN305369,OMIM:617068|MedGen:C3661900|MONDO:MONDO:0009636,MedGen:C5191055,OMIM:251880,Orphanet:279934] |
|
rs763630436
|
- |
- |
|
rs764400206
|
- |
- |
|
rs764422810
|
- |
- |
|
rs764453448
|
Pathogenic |
Hereditary spastic paraplegia 45 [MONDO:MONDO:0013165,MedGen:C3888209,OMIM:613162,Orphanet:320396] |
|
rs764729616
|
- |
- |
|
rs764996394
|
- |
- |
|
rs765408826
|
- |
- |
|
rs765804497
|
- |
- |
|
rs766317703
|
- |
- |
|
rs766606700
|
- |
- |
|
rs766789172
|
- |
- |
|
rs767070149
|
- |
- |
|
rs767651793
|
Pathogenic |
Karyomegalic interstitial nephritis [MONDO:MONDO:0013898,MedGen:C3553774,OMIM:614817,Orphanet:401996] |
|
rs768063459
|
- |
- |
|
rs768302084
|
- |
- |
|
rs768422992
|
- |
- |
|
rs768425517
|
Pathogenic |
Adenine phosphoribosyltransferase deficiency [MONDO:MONDO:0013869,MedGen:C0268120,OMIM:614723,Orphanet:976] |
|
rs768978971
|
- |
- |
|
rs769019873
|
- |
- |
|
rs769879789
|
- |
- |
|
rs770053423
|
Pathogenic/Likely pathogenic |
Alternating hemiplegia of childhood 1|Familial hemiplegic migraine [MONDO:MONDO:0007087,MedGen:C3549447,OMIM:104290,Orphanet:2131|MONDO:MONDO:0000700,MedGen:C0338484,OMIM:PS141500] |
|
rs770248150
|
US |
Colorectal cancer samples |
|
rs770248150
|
Pathogenic |
Neoplasm of the large intestine|Carcinoma of esophagus|Malignant melanoma of skin|Multiple myeloma|Hepatocellular carcinoma|Gastric adenocarcinoma|not provided|Encephalocraniocutaneous lipomatosis [Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MedGen:C3661900|MONDO:MONDO:0013074,MedGen:C0406612,OMIM:613001,Orphanet:2396] |
|
rs770431044
|
- |
- |
|
rs77101217
|
Pathogenic |
Cystic fibrosis|Cystic fibrosis [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586|MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586]; Congenital bilateral aplasia of vas deferens from CFTR mutation|not provided|CFTR-related disorders|Congenital bilateral aplasia of vas deferens from CFTR mutation|Cystic fibrosis [MONDO:MONDO:0010178,MedGen:C0403814,OMIM:277180,Orphanet:48|MedGen:C3661900||MONDO:MONDO:0010178,MedGen:C0403814,OMIM:277180,Orphanet:48|MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586]; Bronchiectasis with or without elevated sweat chloride 1 [MONDO:MONDO:0008887,MedGen:C2749757,OMIM:211400,Orphanet:60033]; Congenital bilateral aplasia of vas deferens from CFTR mutation [MONDO:MONDO:0010178,MedGen:C0403814,OMIM:277180,Orphanet:48]; Hereditary pancreatitis|Bronchiectasis with or without elevated sweat chloride 1 [MONDO:MONDO:0008185,MedGen:C0238339,OMIM:167800,Orphanet:676|MONDO:MONDO:0008887,MedGen:C2749757,OMIM:211400,Orphanet:60033] |
|
rs771034023
|
- |
- |
|
rs77172375
|
- |
- |
|
rs771776126
|
- |
- |
|
rs772012465
|
- |
- |
|
rs772319638
|
- |
- |
|
rs77239104
|
- |
- |
|
rs772893062
|
- |
- |
|
rs773215035
|
Pathogenic/Likely pathogenic |
not provided|Desbuquois dysplasia 1 [MedGen:C3661900|MONDO:MONDO:0009629,MedGen:C4012146,OMIM:251450,Orphanet:1425] |
|
rs773222168
|
- |
- |
|
rs773518859
|
- |
- |
|
rs773901293
|
- |
- |
|
rs774386684
|
- |
- |
|
rs774406575
|
- |
- |
|
rs775032909
|
- |
- |
|
rs775097749
|
- |
- |
|
rs775209507
|
- |
- |
|
rs775316562
|
- |
- |
|
rs775915028
|
- |
- |
|
rs776496275
|
Likely pathogenic |
Adenylosuccinate lyase deficiency [MONDO:MONDO:0007068,MedGen:C0268126,OMIM:103050,Orphanet:46] |
|
rs776501959
|
- |
- |
|
rs776679347
|
- |
- |
|
rs777965686
|
- |
- |
|
rs778404835
|
- |
- |
|
rs779654686
|
Pathogenic/Likely pathogenic |
Autosomal recessive distal spinal muscular atrophy 1 [MONDO:MONDO:0011436,MedGen:C1858517,OMIM:604320,Orphanet:98920]; Charcot-Marie-Tooth disease axonal type 2S|Charcot-Marie-Tooth disease|not provided [MONDO:MONDO:0014511,MedGen:C4015349,OMIM:616155,Orphanet:443073|MONDO:MONDO:0015626,MedGen:C0007959,OMIM:PS118220,Orphanet:166|MedGen:C3661900] |
|
rs780526529
|
LP/P |
Cystic fibrosis (CF) [MIM:219700] |
|
rs780813956
|
- |
- |
|
rs781238057
|
- |
- |
|
rs781585781
|
- |
- |
|
rs78160297
|
- |
- |
|
rs782166627
|
- |
- |
|
rs782463394
|
- |
- |
|
rs782573516
|
- |
- |
|
rs782588770
|
Likely pathogenic |
Oocyte maturation defect 2 [MONDO:MONDO:0021573,MedGen:C4225210,OMIM:616780] |
|
rs782786661
|
- |
- |
|
rs786204847
|
LP/P |
Singleton-Merten syndrome 2 (SGMRT2) [MIM:616298] |
|
rs786204848
|
LP/P |
Singleton-Merten syndrome 2 (SGMRT2) [MIM:616298] |
|
rs786205585
|
Pathogenic/Likely pathogenic |
Baraitser-Winter syndrome 1|Neurodevelopmental delay [MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995|Human Phenotype Ontology:HP:0012758,MedGen:C4022738] |
|
rs796052223
|
LP/P |
Intellectual developmental disorder, X-linked, syndromic, Snijders Blok type (MRXSSB) [MIM:300958] |
|
rs796052231
|
LP/P |
Intellectual developmental disorder, X-linked, syndromic, Snijders Blok type (MRXSSB) [MIM:300958] |
|
rs796052231
|
Pathogenic/Likely pathogenic |
Intellectual disability, X-linked 102|Congenital cerebellar hypoplasia|not provided [MONDO:MONDO:0010497,MedGen:C5393299,OMIM:300958,Orphanet:457260|MONDO:MONDO:0008939,MedGen:C5231391,OMIM:213000,Orphanet:1398,Orphanet:2246|MedGen:C3661900] |
|
rs797045025
|
LP/P |
Intellectual developmental disorder, X-linked, syndromic, Snijders Blok type (MRXSSB) [MIM:300958] |
|
rs797045025
|
Pathogenic |
Intellectual disability, X-linked 102|Inborn genetic diseases|not provided|Syndromic X-linked intellectual disability Claes-Jensen type [MONDO:MONDO:0010497,MedGen:C5393299,OMIM:300958,Orphanet:457260|MeSH:D030342,MedGen:C0950123|MedGen:C3661900|MONDO:MONDO:0010355,MedGen:C1845243,OMIM:300534,Orphanet:85279] |
|
rs797045376
|
Likely pathogenic |
Menkes kinky-hair syndrome [MONDO:MONDO:0010651,MedGen:C0022716,OMIM:309400,Orphanet:565] |
|
rs797045378
|
Pathogenic |
Menkes kinky-hair syndrome [MONDO:MONDO:0010651,MedGen:C0022716,OMIM:309400,Orphanet:565] |
|
rs80338675
|
LP/P |
ARTS syndrome (ARTS) [MIM:301835] |
|
rs80338731
|
LP/P |
Charcot-Marie-Tooth disease, X-linked recessive, 5 (CMTX5) [MIM:311070] |
|
rs863224876
|
Likely pathogenic |
Pseudohypoparathyroidism [Human Phenotype Ontology:HP:0000852,MONDO:MONDO:0019992,MedGen:C0033806,Orphanet:79443,Orphanet:97593]; Pseudohypoparathyroidism type 1C [MONDO:MONDO:0012911,MedGen:C2932716,OMIM:612462,Orphanet:79444] |
|
rs864321676
|
Pathogenic |
Multiple benign circumferential skin creases on limbs 1 [MONDO:MONDO:0020738,MedGen:C4551592,OMIM:156610] |
|
rs864321677
|
Pathogenic |
Multiple benign circumferential skin creases on limbs 1 [MONDO:MONDO:0020738,MedGen:C4551592,OMIM:156610] |
|
rs866311885
|
- |
- |
|
rs869025271
|
Pathogenic |
Oocyte maturation defect 2 [MONDO:MONDO:0021573,MedGen:C4225210,OMIM:616780] |
|
rs869025273
|
Pathogenic |
Oocyte maturation defect 2 [MONDO:MONDO:0021573,MedGen:C4225210,OMIM:616780] |
|
rs869025593
|
Pathogenic |
Hearing loss, X-linked 1|Arts syndrome [MONDO:MONDO:0010577,MedGen:C1844677,OMIM:304500,Orphanet:90625|MONDO:MONDO:0010533,MedGen:C0796028,OMIM:301835,Orphanet:1187] |
|
rs869025609
|
Pathogenic |
Oocyte maturation defect 2 [MONDO:MONDO:0021573,MedGen:C4225210,OMIM:616780] |
|
rs869312692
|
Pathogenic |
Intellectual disability, X-linked 102 [MONDO:MONDO:0010497,MedGen:C5393299,OMIM:300958,Orphanet:457260] |
|
rs869312702
|
Pathogenic/Likely pathogenic |
Developmental and epileptic encephalopathy, 31|6 conditions|not provided [MONDO:MONDO:0014598,MedGen:C4225357,OMIM:616346,Orphanet:2382|6 conditions|MedGen:C3661900] |
|
rs875989802
|
Likely pathogenic |
Intellectual disability, X-linked 102 [MONDO:MONDO:0010497,MedGen:C5393299,OMIM:300958,Orphanet:457260] |
|
rs875989840
|
LP/P |
Striatal degeneration, autosomal dominant 2 (ADSD2) [MIM:616922] |
|
rs875989841
|
LP/P |
Striatal degeneration, autosomal dominant 2 (ADSD2) [MIM:616922] |
|
rs878853256
|
Pathogenic |
Complex cortical dysplasia with other brain malformations 1|not provided [MONDO:MONDO:0013541,MedGen:C3808397,OMIM:614039,Orphanet:300570|MedGen:C3661900] |
|
rs879255688
|
LP/P |
Encephalopathy due to defective mitochondrial and peroxisomal fission 1 (EMPF1) [MIM:614388] |
|
rs886037663
|
Pathogenic |
Complex cortical dysplasia with other brain malformations 5|Congenital cerebellar hypoplasia [MONDO:MONDO:0014337,MedGen:C3810407,OMIM:615763|MONDO:MONDO:0008939,MedGen:C5231391,OMIM:213000,Orphanet:1398,Orphanet:2246] |
|
rs886039472
|
Pathogenic/Likely pathogenic |
not provided|Baraitser-Winter syndrome 1|Inborn genetic diseases|See cases [MedGen:C3661900|MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995|MeSH:D030342,MedGen:C0950123|] |
|
rs886041007
|
Pathogenic/Likely pathogenic |
Hypomyelinating leukodystrophy 6|not provided [MONDO:MONDO:0012905,MedGen:C2676244,OMIM:612438,Orphanet:139441|MedGen:C3661900] |
|
rs886041010
|
Pathogenic |
Hypomyelinating leukodystrophy 6|not provided [MONDO:MONDO:0012905,MedGen:C2676244,OMIM:612438,Orphanet:139441|MedGen:CN517202] |
|
rs895006179
|
- |
- |
|
rs896550845
|
- |
- |
|
rs896550845
|
Pathogenic |
Purine-nucleoside phosphorylase deficiency [MONDO:MONDO:0013171,MedGen:C0268125,OMIM:613179,Orphanet:760] |
|
rs9636610
|
- |
- |
|
rs985929069
|
- |
- |
hsa00232
|
Caffeine metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
-
|
Likely pathogenic |
Anterior segment dysgenesis 6 [MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
.
|
- |
- |
|
rs104893628
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs104894979
|
Likely pathogenic |
Glaucoma 3A|Anterior segment dysgenesis 6 [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
rs148542782
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs1558603396
|
Likely pathogenic |
Glaucoma 3A|Anterior segment dysgenesis 6 [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
rs192453952
|
- |
- |
|
rs28936701
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs28936701
|
Pathogenic |
Glaucoma 3A|not provided|Congenital glaucoma|Primary congenital glaucoma|Anterior segment dysgenesis 6 [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MedGen:C3661900|MONDO:MONDO:0020366,MedGen:C0020302|Human Phenotype Ontology:HP:0008007,MONDO:MONDO:0000365,MedGen:C1533041|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
rs557905773
|
- |
- |
|
rs55989760
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs55989760
|
Pathogenic/Likely pathogenic |
Glaucoma 3A|Primary congenital glaucoma|not provided|Glaucoma of childhood|Anterior segment dysgenesis 6|Congenital glaucoma|Glaucoma 3A [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|Human Phenotype Ontology:HP:0008007,MONDO:MONDO:0000365,MedGen:C1533041|MedGen:C3661900|Human Phenotype Ontology:HP:0001087,MONDO:MONDO:0020367,MedGen:C2981140,Orphanet:98977|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315|MONDO:MONDO:0020366,MedGen:C0020302|MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977]; Glaucoma 3, primary infantile, B [MONDO:MONDO:0010968,MedGen:C1832977,OMIM:600975,Orphanet:98976]; Anterior segment dysgenesis 6 [MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
rs56010818
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs56010818
|
Pathogenic/Likely pathogenic |
not provided|Anterior segment dysgenesis 6|Glaucoma 3A|Congenital glaucoma [MedGen:C3661900|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315|MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MONDO:MONDO:0020366,MedGen:C0020302] |
|
rs57865060
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs66583685
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs669884
|
LB/B |
- |
|
rs72549378
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs752456881
|
LB/B |
- |
|
rs777678299
|
- |
- |
|
rs9341250
|
LB/B |
- |
|
rs944452644
|
Likely pathogenic |
Glaucoma 3A|Anterior segment dysgenesis 6 [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
hsa00240
|
Pyrimidine metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Desbuquois dysplasia 1 (DBQD1) [MIM:251450] |
|
-
|
LP/P |
Postaxial acrofacial dysostosis (POADS) [MIM:263750] |
|
-
|
Likely pathogenic |
Dihydropyrimidine dehydrogenase deficiency [MONDO:MONDO:0010130,MedGen:C1959620,OMIM:274270,Orphanet:1675] |
|
-
|
US |
Spastic paraplegia 45, autosomal recessive (SPG45) [MIM:613162] |
|
-
|
Likely pathogenic |
Purine-nucleoside phosphorylase deficiency [MONDO:MONDO:0013171,MedGen:C0268125,OMIM:613179,Orphanet:760] |
|
-
|
Likely pathogenic |
Intellectual developmental disorder with or without peripheral neuropathy [MONDO:MONDO:0859240,MedGen:C5676969,OMIM:619844] |
|
-
|
US |
Dyskeratosis congenita, digenic (DKCD) [MIM:620040] |
|
.
|
- |
- |
|
rs1000661676
|
- |
- |
|
rs104894028
|
Pathogenic |
Hemolytic anemia due to pyrimidine 5' nucleotidase deficiency [MONDO:MONDO:0009946,MedGen:C1849507,OMIM:266120,Orphanet:35120] |
|
rs104894029
|
Pathogenic |
Hemolytic anemia due to pyrimidine 5' nucleotidase deficiency [MONDO:MONDO:0009946,MedGen:C1849507,OMIM:266120,Orphanet:35120] |
|
rs104894452
|
LP/P |
Purine nucleoside phosphorylase deficiency (PNPD) [MIM:613179] |
|
rs1057516671
|
Likely pathogenic |
Dihydropyrimidine dehydrogenase deficiency [MONDO:MONDO:0010130,MedGen:C1959620,OMIM:274270,Orphanet:1675] |
|
rs1064792855
|
Likely pathogenic |
Mitochondrial DNA depletion syndrome 1 [MONDO:MONDO:0011283,MedGen:C4551995,OMIM:603041,Orphanet:298] |
|
rs1064792867
|
Pathogenic |
Mitochondrial DNA depletion syndrome 1 [MONDO:MONDO:0011283,MedGen:C4551995,OMIM:603041,Orphanet:298] |
|
rs115222424
|
- |
- |
|
rs1212037891
|
- |
- |
|
rs121913037
|
LP/P |
Mitochondrial DNA depletion syndrome 1, MNGIE type (MTDPS1) [MIM:603041] |
|
rs121913039
|
Pathogenic/Likely pathogenic |
Mitochondrial DNA depletion syndrome 1|not provided [MONDO:MONDO:0011283,MedGen:C4551995,OMIM:603041,Orphanet:298|MedGen:C3661900] |
|
rs121913041
|
Likely pathogenic |
Mitochondrial DNA depletion syndrome 1|not provided [MONDO:MONDO:0011283,MedGen:C4551995,OMIM:603041,Orphanet:298|MedGen:CN517202] |
|
rs121917887
|
LB/B |
- |
|
rs1220608789
|
Likely pathogenic |
Dihydropyrimidine dehydrogenase deficiency [MONDO:MONDO:0010130,MedGen:C1959620,OMIM:274270,Orphanet:1675] |
|
rs1222936229
|
- |
- |
|
rs1247497521
|
Pathogenic/Likely pathogenic |
not provided|Purine-nucleoside phosphorylase deficiency [MedGen:C3661900|MONDO:MONDO:0013171,MedGen:C0268125,OMIM:613179,Orphanet:760] |
|
rs1251962665
|
- |
- |
|
rs138110445
|
- |
- |
|
rs138825464
|
- |
- |
|
rs139332887
|
Pathogenic/Likely pathogenic |
not provided|Developmental and epileptic encephalopathy, 50|Infantile epileptic dyskinetic encephalopathy [MedGen:C3661900|MONDO:MONDO:0014647,MedGen:C4225320,OMIM:616457,Orphanet:448010|MONDO:MONDO:0018226,MedGen:C4552072,Orphanet:364063] |
|
rs1398420394
|
Likely pathogenic |
Purine-nucleoside phosphorylase deficiency [MONDO:MONDO:0013171,MedGen:C0268125,OMIM:613179,Orphanet:760] |
|
rs140602333
|
- |
- |
|
rs1419090736
|
Pathogenic |
Hereditary spastic paraplegia 45 [MONDO:MONDO:0013165,MedGen:C3888209,OMIM:613162,Orphanet:320396] |
|
rs1440561057
|
- |
- |
|
rs146054415
|
- |
- |
|
rs146354908
|
- |
- |
|
rs148119952
|
Pathogenic |
Intellectual developmental disorder with or without peripheral neuropathy [MONDO:MONDO:0859240,MedGen:C5676969,OMIM:619844] |
|
rs148785781
|
- |
- |
|
rs149977726
|
LP/P |
Mitochondrial DNA depletion syndrome 1, MNGIE type (MTDPS1) [MIM:603041] |
|
rs150181226
|
LP/P |
Desbuquois dysplasia 1 (DBQD1) [MIM:251450] |
|
rs1557548856
|
- |
- |
|
rs1594427504
|
Likely pathogenic |
not provided|Purine-nucleoside phosphorylase deficiency [MedGen:CN517202|MONDO:MONDO:0013171,MedGen:C0268125,OMIM:613179,Orphanet:760] |
|
rs17843776
|
- |
- |
|
rs1801266
|
- |
- |
|
rs201047833
|
- |
- |
|
rs201461737
|
- |
- |
|
rs201761717
|
- |
- |
|
rs2122346498
|
Pathogenic/Likely pathogenic |
Inosine triphosphatase deficiency|Infantile epileptic dyskinetic encephalopathy [MONDO:MONDO:0013461,MedGen:C0342800,OMIM:613850|MONDO:MONDO:0018226,MedGen:C4552072,Orphanet:364063] |
|
rs267606699
|
LP/P |
Desbuquois dysplasia 1 (DBQD1) [MIM:251450] |
|
rs267606700
|
- |
- |
|
rs267606700
|
LP/P |
Desbuquois dysplasia 1 (DBQD1) [MIM:251450] |
|
rs267606701
|
LP/P |
Desbuquois dysplasia 1 (DBQD1) [MIM:251450] |
|
rs34082669
|
LB/B |
- |
|
rs368327291
|
- |
- |
|
rs369010777
|
- |
- |
|
rs370539470
|
- |
- |
|
rs372332465
|
- |
- |
|
rs527580106
|
- |
- |
|
rs549266010
|
- |
- |
|
rs56005131
|
- |
- |
|
rs587777173
|
Pathogenic |
Hereditary spastic paraplegia 45|not provided [MONDO:MONDO:0013165,MedGen:C3888209,OMIM:613162,Orphanet:320396|MedGen:C3661900] |
|
rs59086055
|
- |
- |
|
rs746316064
|
- |
- |
|
rs749246739
|
LP/P |
Desbuquois dysplasia 1 (DBQD1) [MIM:251450] |
|
rs749313159
|
- |
- |
|
rs751841116
|
- |
- |
|
rs752868920
|
- |
- |
|
rs753379195
|
- |
- |
|
rs756580671
|
- |
- |
|
rs756684474
|
- |
- |
|
rs759225435
|
- |
- |
|
rs760099482
|
- |
- |
|
rs761665644
|
Pathogenic |
Mitochondrial DNA depletion syndrome 1 [MONDO:MONDO:0011283,MedGen:C4551995,OMIM:603041,Orphanet:298] |
|
rs762276870
|
- |
- |
|
rs762529775
|
- |
- |
|
rs763322504
|
- |
- |
|
rs763355511
|
- |
- |
|
rs763630436
|
- |
- |
|
rs764453448
|
Pathogenic |
Hereditary spastic paraplegia 45 [MONDO:MONDO:0013165,MedGen:C3888209,OMIM:613162,Orphanet:320396] |
|
rs765396900
|
- |
- |
|
rs765408826
|
- |
- |
|
rs768803110
|
- |
- |
|
rs772754957
|
- |
- |
|
rs773215035
|
Pathogenic/Likely pathogenic |
not provided|Desbuquois dysplasia 1 [MedGen:C3661900|MONDO:MONDO:0009629,MedGen:C4012146,OMIM:251450,Orphanet:1425] |
|
rs773499729
|
- |
- |
|
rs773721953
|
- |
- |
|
rs775032909
|
- |
- |
|
rs775316562
|
- |
- |
|
rs776973423
|
- |
- |
|
rs777965686
|
- |
- |
|
rs7867616
|
- |
- |
|
rs887888951
|
- |
- |
|
rs887888951
|
US |
Neurodegeneration, childhood-onset, with progressive microcephaly (CONPM) [MIM:619847] |
|
rs895833357
|
- |
- |
|
rs967806646
|
- |
- |
hsa00250
|
Alanine, aspartate and glutamate metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
|
-
|
Pathogenic |
Citrullinemia|Citrullinemia type I [Human Phenotype Ontology:HP:0032397,MONDO:MONDO:0015991,MedGen:C0175683,Orphanet:187|MONDO:MONDO:0008988,MedGen:C4721769,OMIM:215700,Orphanet:247525] |
|
-
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
-
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
-
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
-
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
-
|
Pathogenic |
Spongy degeneration of central nervous system [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141] |
|
-
|
LP/P |
Succinic semialdehyde dehydrogenase deficiency (SSADHD) [MIM:271980] |
|
-
|
Pathogenic |
Succinate-semialdehyde dehydrogenase deficiency [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22] |
|
-
|
LP/P |
Myasthenic syndrome, congenital, 12 (CMS12) [MIM:610542] |
|
-
|
Pathogenic |
Gamma-aminobutyric acid transaminase deficiency [MONDO:MONDO:0013166,MedGen:C0342708,OMIM:613163,Orphanet:2066] |
|
-
|
Likely pathogenic |
Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
.
|
- |
- |
|
rs1014551540
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs1036185928
|
Pathogenic |
not provided|Adenylosuccinate lyase deficiency [MedGen:C3661900|MONDO:MONDO:0007068,MedGen:C0268126,OMIM:103050,Orphanet:46] |
|
rs1046009538
|
- |
- |
|
rs1048119191
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs104894550
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs104894551
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs104894553
|
- |
- |
|
rs104894553
|
Pathogenic/Likely pathogenic |
Mild Canavan disease|Spongy degeneration of central nervous system|not provided|Inborn genetic diseases [MONDO:MONDO:0017831,MedGen:C4017127,Orphanet:314918|MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs113879010
|
Pathogenic/Likely pathogenic |
not provided|Primary hyperoxaluria, type I [MedGen:C3661900|MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs115014558
|
LB/B |
- |
|
rs1166271142
|
Pathogenic/Likely pathogenic |
Congenital microcephaly - severe encephalopathy - progressive cerebral atrophy syndrome|not provided [MONDO:MONDO:0014258,MedGen:C3809971,OMIM:615574,Orphanet:391376|MedGen:C3661900] |
|
rs1172971002
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I|Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147|MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
rs1176072053
|
- |
- |
|
rs118203982
|
Pathogenic |
Succinate-semialdehyde dehydrogenase deficiency|not provided [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22|MedGen:C3661900] |
|
rs1192320601
|
Likely pathogenic |
Spongy degeneration of central nervous system [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141] |
|
rs1193344118
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs1202306773
|
- |
- |
|
rs1202306773
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs121434578
|
Pathogenic |
Gamma-aminobutyric acid transaminase deficiency [MONDO:MONDO:0013166,MedGen:C0342708,OMIM:613163,Orphanet:2066] |
|
rs121908520
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908521
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs121908522
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908522
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs121908524
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908524
|
Pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs121908526
|
- |
- |
|
rs121908526
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908527
|
- |
- |
|
rs121908527
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908528
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs121908529
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria|AGXT-related condition [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416|] |
|
rs121908530
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908530
|
Pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs121908638
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
|
rs121908645
|
Pathogenic/Likely pathogenic |
Citrullinemia type I|Citrullinemia [MONDO:MONDO:0008988,MedGen:C4721769,OMIM:215700,Orphanet:247525|Human Phenotype Ontology:HP:0032397,MONDO:MONDO:0015991,MedGen:C0175683,Orphanet:187] |
|
rs121909732
|
Pathogenic |
Hyperinsulinism-hyperammonemia syndrome [MONDO:MONDO:0011717,MedGen:C1847555,OMIM:606762,Orphanet:35878] |
|
rs121909734
|
Pathogenic |
Hyperinsulinism-hyperammonemia syndrome [MONDO:MONDO:0011717,MedGen:C1847555,OMIM:606762,Orphanet:35878] |
|
rs121912592
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs121912592
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I|Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147|MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
rs121912596
|
- |
- |
|
rs121912596
|
Pathogenic |
Congenital hyperammonemia, type I|Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147|MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
rs1229554099
|
- |
- |
|
rs1232923691
|
- |
- |
|
rs1235382146
|
- |
- |
|
rs1235670046
|
- |
- |
|
rs1242028775
|
- |
- |
|
rs1242028775
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1245368879
|
Pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1275599086
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1280211937
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs12948217
|
Pathogenic |
Spongy degeneration of central nervous system|not provided|Canavan Disease, Familial Form|Inborn genetic diseases [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141|MedGen:C3661900|MedGen:C0751663|MeSH:D030342,MedGen:C0950123] |
|
rs1304689724
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs1305147387
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1319489001
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1326334493
|
- |
- |
|
rs1326526453
|
- |
- |
|
rs1326526453
|
LP/P |
Succinic semialdehyde dehydrogenase deficiency (SSADHD) [MIM:271980] |
|
rs1327048960
|
Pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1337182136
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs13408961
|
LB/B |
- |
|
rs1364564756
|
- |
- |
|
rs137852937
|
LP/P |
Hyperprolinemia 2 (HYRPRO2) [MIM:239510] |
|
rs137933272
|
- |
- |
|
rs1392559810
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1392934477
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs139332887
|
Pathogenic/Likely pathogenic |
not provided|Developmental and epileptic encephalopathy, 50|Infantile epileptic dyskinetic encephalopathy [MedGen:C3661900|MONDO:MONDO:0014647,MedGen:C4225320,OMIM:616457,Orphanet:448010|MONDO:MONDO:0018226,MedGen:C4552072,Orphanet:364063] |
|
rs140581464
|
- |
- |
|
rs140992177
|
LB/B |
- |
|
rs1414143303
|
- |
- |
|
rs1414143303
|
Pathogenic |
Congenital hyperammonemia, type I|Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147|MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147]; Pulmonary hypertension, neonatal, susceptibility to|Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371|MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
rs1414684396
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs142114432
|
- |
- |
|
rs1446467099
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs145087265
|
LP/P |
Succinic semialdehyde dehydrogenase deficiency (SSADHD) [MIM:271980] |
|
rs1471393474
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs149518280
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1553509297
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1553511785
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1553512642
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1553513429
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1553516442
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1553516443
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1553518389
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1555538148
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs1555538151
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs1558749457
|
Pathogenic |
Congenital myasthenic syndrome 12 [MONDO:MONDO:0012518,MedGen:C3552335,OMIM:610542,Orphanet:353327,Orphanet:590] |
|
rs1558986214
|
LP/P |
Infantile cataract, skin abnormalities, glutamate excess, and impaired intellectual development (CASGID) [MIM:618339] |
|
rs1559142152
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1574586310
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1574646079
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1584459666
|
Pathogenic |
Congenital microcephaly - severe encephalopathy - progressive cerebral atrophy syndrome [MONDO:MONDO:0014258,MedGen:C3809971,OMIM:615574,Orphanet:391376] |
|
rs1597439028
|
Pathogenic |
Spongy degeneration of central nervous system|Inborn genetic diseases [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141|MeSH:D030342,MedGen:C0950123] |
|
rs1601586359
|
Pathogenic/Likely pathogenic |
Adenylosuccinate lyase deficiency [MONDO:MONDO:0007068,MedGen:C0268126,OMIM:103050,Orphanet:46] |
|
rs1698686495
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1698754274
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1698933356
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1700715255
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1700881929
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1701171267
|
Pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1701172643
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1764675543
|
Pathogenic |
Succinate-semialdehyde dehydrogenase deficiency [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22] |
|
rs180177155
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177156
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177156
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs180177157
|
- |
- |
|
rs180177157
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177161
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177162
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177163
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177173
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177182
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177184
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177184
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs180177185
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177186
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177189
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177191
|
- |
- |
|
rs180177191
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177195
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177197
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177198
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177199
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177202
|
Pathogenic |
Primary hyperoxaluria, type I|Primary hyperoxaluria|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416|MedGen:C3661900] |
|
rs180177203
|
Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177208
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177210
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177211
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177214
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177217
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177225
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177236
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177243
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177244
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177247
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177248
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177248
|
Pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs180177250
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177252
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177253
|
- |
- |
|
rs180177253
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177259
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177264
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177269
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177272
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177277
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177279
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177284
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177287
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177288
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177289
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177290
|
- |
- |
|
rs180177290
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177292
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177303
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs1845507027
|
Pathogenic/Likely pathogenic |
Citrullinemia|Citrullinemia type I [Human Phenotype Ontology:HP:0032397,MONDO:MONDO:0015991,MedGen:C0175683,Orphanet:187|MONDO:MONDO:0008988,MedGen:C4721769,OMIM:215700,Orphanet:247525] |
|
rs1891497352
|
Pathogenic |
Myopathy, distal, 5 [MONDO:MONDO:0014877,MedGen:C5567521,OMIM:617030,Orphanet:482601] |
|
rs200207185
|
- |
- |
|
rs201397255
|
- |
- |
|
rs201623252
|
LB/B |
- |
|
rs201623252
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
|
rs201887670
|
- |
- |
|
rs202092105
|
- |
- |
|
rs202107577
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I|Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147|MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
rs202108064
|
- |
- |
|
rs2058978388
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs2058986411
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs2105908864
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I|Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147|MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147]; Pulmonary hypertension, neonatal, susceptibility to|Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371|MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
rs2105922857
|
Pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs2105942900
|
Pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs2124851950
|
Likely pathogenic |
Infantile cataract, skin abnormalities, glutamate excess, and impaired intellectual development [MONDO:MONDO:0032685,MedGen:C5193037,OMIM:618339] |
|
rs2127385894
|
Pathogenic |
Succinate-semialdehyde dehydrogenase deficiency [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22] |
|
rs2133777379
|
Pathogenic |
Hyperinsulinism-hyperammonemia syndrome [MONDO:MONDO:0011717,MedGen:C1847555,OMIM:606762,Orphanet:35878] |
|
rs2150741844
|
Likely pathogenic |
Spongy degeneration of central nervous system [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141] |
|
rs2150746796
|
Pathogenic |
Spongy degeneration of central nervous system [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141] |
|
rs2150764080
|
Likely pathogenic |
Spongy degeneration of central nervous system [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141] |
|
rs28940279
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs28940283
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs34664134
|
- |
- |
|
rs34885252
|
LB/B |
- |
|
rs368127499
|
- |
- |
|
rs369061090
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs371265106
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
|
rs372138644
|
- |
- |
|
rs372399525
|
- |
- |
|
rs373458753
|
LP/P |
Adenylosuccinase deficiency (ADSLD) [MIM:103050] |
|
rs373705613
|
- |
- |
|
rs373774032
|
Pathogenic/Likely pathogenic |
not provided|Congenital microcephaly - severe encephalopathy - progressive cerebral atrophy syndrome|Inborn genetic diseases [MedGen:C3661900|MONDO:MONDO:0014258,MedGen:C3809971,OMIM:615574,Orphanet:391376|MeSH:D030342,MedGen:C0950123] |
|
rs374232934
|
- |
- |
|
rs375628463
|
LP/P |
Succinic semialdehyde dehydrogenase deficiency (SSADHD) [MIM:271980] |
|
rs375736464
|
Likely pathogenic |
Spongy degeneration of central nervous system [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141] |
|
rs377342766
|
- |
- |
|
rs398122973
|
LP/P |
Asparagine synthetase deficiency (ASNSD) [MIM:615574] |
|
rs4426527
|
LB/B |
- |
|
rs536205988
|
- |
- |
|
rs540648461
|
- |
- |
|
rs549085827
|
Pathogenic/Likely pathogenic |
Citrullinemia|Citrullinemia type I [Human Phenotype Ontology:HP:0032397,MONDO:MONDO:0015991,MedGen:C0175683,Orphanet:187|MONDO:MONDO:0008988,MedGen:C4721769,OMIM:215700,Orphanet:247525] |
|
rs552474817
|
- |
- |
|
rs556944473
|
- |
- |
|
rs61729604
|
- |
- |
|
rs62621664
|
LB/B |
- |
|
rs62621664
|
Likely pathogenic |
Succinate-semialdehyde dehydrogenase deficiency [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22] |
|
rs72552283
|
LP/P |
Succinic semialdehyde dehydrogenase deficiency (SSADHD) [MIM:271980] |
|
rs73106685
|
LB/B |
- |
|
rs74205173
|
- |
- |
|
rs745404241
|
Pathogenic/Likely pathogenic |
Citrullinemia type I|Citrullinemia [MONDO:MONDO:0008988,MedGen:C4721769,OMIM:215700,Orphanet:247525|Human Phenotype Ontology:HP:0032397,MONDO:MONDO:0015991,MedGen:C0175683,Orphanet:187] |
|
rs747043550
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs747624770
|
Pathogenic/Likely pathogenic |
Congenital microcephaly - severe encephalopathy - progressive cerebral atrophy syndrome|not provided [MONDO:MONDO:0014258,MedGen:C3809971,OMIM:615574,Orphanet:391376|MedGen:C3661900] |
|
rs748170674
|
Pathogenic |
Succinate-semialdehyde dehydrogenase deficiency [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22] |
|
rs748725086
|
- |
- |
|
rs749093544
|
- |
- |
|
rs749313159
|
- |
- |
|
rs749406391
|
- |
- |
|
rs749568989
|
- |
- |
|
rs750670270
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs750905647
|
- |
- |
|
rs751156234
|
- |
- |
|
rs751888532
|
Pathogenic/Likely pathogenic |
Succinate-semialdehyde dehydrogenase deficiency|not provided|ALDH5A1-related condition [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22|MedGen:C3661900|] |
|
rs752258545
|
- |
- |
|
rs752339705
|
- |
- |
|
rs752339705
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs753379195
|
- |
- |
|
rs753866967
|
LP/P |
Myasthenic syndrome, congenital, 12 (CMS12) [MIM:610542] |
|
rs754054554
|
- |
- |
|
rs756337473
|
- |
- |
|
rs756337473
|
Pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs756437332
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs757187379
|
- |
- |
|
rs757205958
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs757729851
|
Pathogenic/Likely pathogenic |
not provided|Congenital microcephaly - severe encephalopathy - progressive cerebral atrophy syndrome [MedGen:C3661900|MONDO:MONDO:0014258,MedGen:C3809971,OMIM:615574,Orphanet:391376] |
|
rs759201450
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs759836341
|
- |
- |
|
rs760752541
|
- |
- |
|
rs761064915
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs762387914
|
- |
- |
|
rs762387914
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
|
rs762529775
|
- |
- |
|
rs763355511
|
- |
- |
|
rs763589704
|
- |
- |
|
rs765196603
|
- |
- |
|
rs765561257
|
LP/P |
Succinic semialdehyde dehydrogenase deficiency (SSADHD) [MIM:271980] |
|
rs765649468
|
- |
- |
|
rs765804497
|
- |
- |
|
rs765910470
|
- |
- |
|
rs767377977
|
- |
- |
|
rs768215008
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
|
rs768495738
|
- |
- |
|
rs768803110
|
- |
- |
|
rs769018733
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
|
rs769085115
|
- |
- |
|
rs770706390
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs770944877
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
|
rs771385956
|
- |
- |
|
rs771794639
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
|
rs772361710
|
- |
- |
|
rs772446143
|
- |
- |
|
rs773049803
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs774323189
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs774496720
|
- |
- |
|
rs774808316
|
Likely pathogenic |
Congenital microcephaly - severe encephalopathy - progressive cerebral atrophy syndrome|not provided [MONDO:MONDO:0014258,MedGen:C3809971,OMIM:615574,Orphanet:391376|MedGen:C3661900] |
|
rs775163147
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
|
rs775305020
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
|
rs776496275
|
Likely pathogenic |
Adenylosuccinate lyase deficiency [MONDO:MONDO:0007068,MedGen:C0268126,OMIM:103050,Orphanet:46] |
|
rs776777887
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs777233486
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs777828000
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
|
rs778448554
|
- |
- |
|
rs779013628
|
- |
- |
|
rs779259590
|
- |
- |
|
rs781555217
|
Pathogenic |
Gamma-aminobutyric acid transaminase deficiency [MONDO:MONDO:0013166,MedGen:C0342708,OMIM:613163,Orphanet:2066] |
|
rs781581679
|
- |
- |
|
rs796052057
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052059
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052060
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052061
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs796052062
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052063
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052064
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs796052065
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052066
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs797045306
|
Likely pathogenic |
Congenital microcephaly - severe encephalopathy - progressive cerebral atrophy syndrome [MONDO:MONDO:0014258,MedGen:C3809971,OMIM:615574,Orphanet:391376] |
|
rs80358214
|
LP/P |
Congenital systemic glutamine deficiency (CSGD) [MIM:610015] |
|
rs886043944
|
- |
- |
|
rs906284769
|
Pathogenic/Likely pathogenic |
not specified|Succinate-semialdehyde dehydrogenase deficiency|not provided [MedGen:CN169374|MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22|MedGen:C3661900] |
|
rs923744167
|
- |
- |
|
rs933813349
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs933813349
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I|Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147|MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
rs936192871
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
|
rs937670540
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs948326794
|
Likely pathogenic |
Congenital microcephaly - severe encephalopathy - progressive cerebral atrophy syndrome [MONDO:MONDO:0014258,MedGen:C3809971,OMIM:615574,Orphanet:391376] |
rn00254
|
Aflatoxin biosynthesis
|
dbSNP |
Type |
Disease name |
|
rs1357271377
|
US |
A colorectal cancer sample |
hsa00260
|
Glycine, serine and threonine metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
-
|
Pathogenic |
Classic homocystinuria [MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394] |
|
-
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
-
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
-
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type II|not provided [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599|MedGen:C3661900] |
|
-
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
-
|
LP/P |
Phosphoserine aminotransferase deficiency (PSATD) [MIM:610992] |
|
-
|
Pathogenic |
Arginine:glycine amidinotransferase deficiency [MONDO:MONDO:0012996,MedGen:C2675179,OMIM:612718,Orphanet:35704] |
|
-
|
LP/P |
Cerebral creatine deficiency syndrome 2 (CCDS2) [MIM:612736] |
|
-
|
LP/P |
Neu-Laxova syndrome 2 (NLS2) [MIM:616038] |
|
-
|
Likely pathogenic |
Cerebral creatine deficiency syndrome|Deficiency of guanidinoacetate methyltransferase [MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172|MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382] |
|
.
|
- |
- |
|
rs1019608054
|
- |
- |
|
rs1041969
|
LB/B |
- |
|
rs104894035
|
LP/P |
Phosphoserine phosphatase deficiency (PSPHD) [MIM:614023] |
|
rs104894036
|
LP/P |
Phosphoserine phosphatase deficiency (PSPHD) [MIM:614023] |
|
rs104894694
|
LP/P |
Cerebral creatine deficiency syndrome 2 (CCDS2) [MIM:612736] |
|
rs104894694
|
Likely pathogenic |
Deficiency of guanidinoacetate methyltransferase|Cerebral creatine deficiency syndrome [MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382|MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172] |
|
rs1057518515
|
- |
- |
|
rs1126673
|
- |
- |
|
rs113879010
|
Pathogenic/Likely pathogenic |
not provided|Primary hyperoxaluria, type I [MedGen:C3661900|MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs115014558
|
LB/B |
- |
|
rs1170128038
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs1170817007
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs117195882
|
- |
- |
|
rs1176072053
|
- |
- |
|
rs1191141364
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs1193344118
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs1209918450
|
- |
- |
|
rs121908331
|
Likely pathogenic |
Dimethylglycine dehydrogenase deficiency|not provided [MONDO:MONDO:0011610,MedGen:C1853892,OMIM:605850,Orphanet:243343|MedGen:C3661900] |
|
rs121908520
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908521
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs121908522
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908522
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs121908524
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908524
|
Pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs121908526
|
- |
- |
|
rs121908526
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908527
|
- |
- |
|
rs121908527
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908528
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs121908529
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria|AGXT-related condition [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416|] |
|
rs121908530
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908530
|
Pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs121909272
|
LP/P |
Cerebral creatine deficiency syndrome 2 (CCDS2) [MIM:612736] |
|
rs121909272
|
Likely pathogenic |
Deficiency of guanidinoacetate methyltransferase|Cerebral creatine deficiency syndrome [MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382|MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172] |
|
rs121912707
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Seizure|Pyridoxine-dependent epilepsy caused by ALDH7A1 mutant [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|Human Phenotype Ontology:HP:0001250,Human Phenotype Ontology:HP:0001275,Human Phenotype Ontology:HP:0001303,Human Phenotype Ontology:HP:0002125,Human Phenotype Ontology:HP:0002182,Human Phenotype Ontology:HP:0002279,Human Phenotype Ontology:HP:0002306,Human Phenotype Ontology:HP:0002348,Human Phenotype Ontology:HP:0002391,Human Phenotype Ontology:HP:0002417,Human Phenotype Ontology:HP:0002430,Human Phenotype Ontology:HP:0002431,Human Phenotype Ontology:HP:0002432,Human Phenotype Ontology:HP:0002434,Human Phenotype Ontology:HP:0002437,Human Phenotype Ontology:HP:0002466,Human Phenotype Ontology:HP:0002479,Human Phenotype Ontology:HP:0002794,Human Phenotype Ontology:HP:0006997,Human Phenotype Ontology:HP:0010520,MedGen:C0036572|MONDO:MONDO:0020741,MedGen:CN293409] |
|
rs121912711
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs121964925
|
LP/P |
Erythrocytosis, familial, 8 (ECYT8) [MIM:222800] |
|
rs121964962
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs121964962
|
Pathogenic |
Homocystinuria, pyridoxine-nonresponsive|HYPERHOMOCYSTEINEMIA, THROMBOTIC, CBS-RELATED|not provided|Classic homocystinuria|Homocystinuria|Familial thoracic aortic aneurysm and aortic dissection [MedGen:C4017308|MedGen:C3150344|MedGen:C3661900|MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394|Human Phenotype Ontology:HP:0002156,MONDO:MONDO:0004737,MedGen:C0019880|MONDO:MONDO:0019625,MedGen:C4707243,OMIM:PS607086,Orphanet:91387] |
|
rs121964967
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs121964969
|
- |
- |
|
rs121964969
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs121964969
|
Pathogenic/Likely pathogenic |
Homocystinuria, pyridoxine-responsive|Classic homocystinuria|Homocystinuria|HYPERHOMOCYSTEINEMIA, THROMBOTIC, CBS-RELATED|not provided|Familial thoracic aortic aneurysm and aortic dissection [MedGen:C3502110|MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394|Human Phenotype Ontology:HP:0002156,MONDO:MONDO:0004737,MedGen:C0019880|MedGen:C3150344|MedGen:C3661900|MONDO:MONDO:0019625,MedGen:C4707243,OMIM:PS607086,Orphanet:91387] |
|
rs121964972
|
- |
- |
|
rs121964972
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs121964973
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs121964988
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs121964991
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs121964993
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs1229984
|
LB/B |
- |
|
rs1239594775
|
- |
- |
|
rs1262762031
|
- |
- |
|
rs1304669003
|
Pathogenic |
Classic homocystinuria|not provided [MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394|MedGen:CN517202] |
|
rs1304689724
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs1311224546
|
- |
- |
|
rs1311982393
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1325460408
|
Likely pathogenic |
Fanconi renotubular syndrome 1 [MONDO:MONDO:0024525,MedGen:C4551503,OMIM:134600] |
|
rs1327662246
|
- |
- |
|
rs13408961
|
LB/B |
- |
|
rs1366833576
|
- |
- |
|
rs1371496558
|
LP/P |
Cerebral creatine deficiency syndrome 2 (CCDS2) [MIM:612736] |
|
rs138025751
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs139166171
|
- |
- |
|
rs1393023702
|
- |
- |
|
rs139396226
|
- |
- |
|
rs140778208
|
LB/B |
- |
|
rs140992177
|
LB/B |
- |
|
rs142114432
|
- |
- |
|
rs142814307
|
LP/P |
Cerebral creatine deficiency syndrome 3 (CCDS3) [MIM:612718] |
|
rs143124288
|
Pathogenic/Likely pathogenic |
HYPERHOMOCYSTEINEMIA, THROMBOTIC, CBS-RELATED|Homocystinuria|Classic homocystinuria [MedGen:C3150344|Human Phenotype Ontology:HP:0002156,MONDO:MONDO:0004737,MedGen:C0019880|MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394] |
|
rs1438933819
|
Pathogenic |
Classic homocystinuria [MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394] |
|
rs1441030187
|
LP/P |
Cerebral creatine deficiency syndrome 2 (CCDS2) [MIM:612736] |
|
rs1441030187
|
Pathogenic |
Cerebral creatine deficiency syndrome|Deficiency of guanidinoacetate methyltransferase [MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172|MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382] |
|
rs144503922
|
- |
- |
|
rs1445469430
|
- |
- |
|
rs1447665588
|
LP/P |
Cerebral creatine deficiency syndrome 2 (CCDS2) [MIM:612736] |
|
rs1450940305
|
- |
- |
|
rs1463626619
|
- |
- |
|
rs1464223176
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs147044875
|
- |
- |
|
rs1471862905
|
- |
- |
|
rs148865119
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs148865119
|
Pathogenic/Likely pathogenic |
not provided|Classic homocystinuria|HYPERHOMOCYSTEINEMIA, THROMBOTIC, CBS-RELATED|Familial thoracic aortic aneurysm and aortic dissection [MedGen:C3661900|MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394|MedGen:C3150344|MONDO:MONDO:0019625,MedGen:C4707243,OMIM:PS607086,Orphanet:91387] |
|
rs149119723
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs149408684
|
- |
- |
|
rs150338273
|
LB/B |
- |
|
rs1555874803
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs1569006974
|
- |
- |
|
rs1600158346
|
LP/P |
Cerebral creatine deficiency syndrome 2 (CCDS2) [MIM:612736] |
|
rs1600158346
|
Likely pathogenic |
Deficiency of guanidinoacetate methyltransferase|Cerebral creatine deficiency syndrome|not specified [MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382|MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172|MedGen:CN169374] |
|
rs1600158570
|
Pathogenic |
Cerebral creatine deficiency syndrome [MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172] |
|
rs1750309299
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1750388096
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs180177155
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177156
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177156
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs180177157
|
- |
- |
|
rs180177157
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177161
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177162
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177163
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177173
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177181
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177182
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177184
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177184
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs180177185
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177186
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177189
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177191
|
- |
- |
|
rs180177191
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177195
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177197
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177198
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177199
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177202
|
Pathogenic |
Primary hyperoxaluria, type I|Primary hyperoxaluria|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416|MedGen:C3661900] |
|
rs180177203
|
Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177208
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177210
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177211
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177214
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177217
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177225
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177236
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177238
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs180177243
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177244
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177247
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177248
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177248
|
Pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs180177250
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177252
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177253
|
- |
- |
|
rs180177253
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177259
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177262
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177263
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177264
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177269
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177272
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177277
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177279
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177284
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177287
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177288
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177289
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177290
|
- |
- |
|
rs180177290
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177292
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177303
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177312
|
Likely pathogenic |
Primary hyperoxaluria, type II [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599] |
|
rs180177314
|
Pathogenic |
Primary hyperoxaluria, type II|Primary hyperoxaluria|not provided [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416|MedGen:C3661900] |
|
rs180177322
|
- |
- |
|
rs180177322
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type II|not provided [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599|MedGen:C3661900] |
|
rs180177323
|
Likely pathogenic |
Primary hyperoxaluria, type II [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599] |
|
rs1805073
|
- |
- |
|
rs1805074
|
- |
- |
|
rs1823086297
|
Likely pathogenic |
Primary hyperoxaluria, type II [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599] |
|
rs182600362
|
- |
- |
|
rs1982601982
|
Likely pathogenic |
Classic homocystinuria [MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394] |
|
rs200244541
|
- |
- |
|
rs200444143
|
- |
- |
|
rs200444143
|
Pathogenic |
not provided|Cerebral creatine deficiency syndrome|Deficiency of guanidinoacetate methyltransferase [MedGen:C3661900|MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172|MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382] |
|
rs200543916
|
- |
- |
|
rs200833152
|
LB/B |
- |
|
rs201256313
|
- |
- |
|
rs201835306
|
- |
- |
|
rs201934016
|
- |
- |
|
rs201948406
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Inborn genetic diseases [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs202103028
|
LP/P |
Neu-Laxova syndrome 2 (NLS2) [MIM:616038] |
|
rs202108064
|
- |
- |
|
rs202241708
|
- |
- |
|
rs2032247686
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs2032282970
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs2058978388
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs2058986411
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs2066702
|
LB/B |
- |
|
rs2144637546
|
Pathogenic/Likely pathogenic |
Cerebral creatine deficiency syndrome|Deficiency of guanidinoacetate methyltransferase [MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172|MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382] |
|
rs267606947
|
LP/P |
Phosphoglycerate dehydrogenase deficiency (PHGDHD) [MIM:601815] |
|
rs267606949
|
LP/P |
Phosphoglycerate dehydrogenase deficiency (PHGDHD) [MIM:601815] |
|
rs28730628
|
LB/B |
- |
|
rs28941786
|
LP/P |
Cystathioninuria (CSTNU) [MIM:219500] |
|
rs34664134
|
- |
- |
|
rs34885252
|
LB/B |
- |
|
rs35385902
|
LB/B |
- |
|
rs367861880
|
- |
- |
|
rs370421531
|
Pathogenic |
not provided|Deficiency of guanidinoacetate methyltransferase|Cerebral creatine deficiency syndrome [MedGen:C3661900|MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382|MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172] |
|
rs371260220
|
- |
- |
|
rs371807385
|
- |
- |
|
rs372027428
|
LB/B |
- |
|
rs372138644
|
- |
- |
|
rs372399525
|
- |
- |
|
rs372660425
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs3733890
|
- |
- |
|
rs374024099
|
- |
- |
|
rs374724533
|
Pathogenic |
Cerebral creatine deficiency syndrome|Deficiency of guanidinoacetate methyltransferase|not provided [MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172|MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382|MedGen:C3661900] |
|
rs376106786
|
- |
- |
|
rs376982466
|
LP/P |
Cerebral creatine deficiency syndrome 3 (CCDS3) [MIM:612718] |
|
rs377578020
|
LP/P |
Cerebral creatine deficiency syndrome 3 (CCDS3) [MIM:612718] |
|
rs377699817
|
- |
- |
|
rs397514708
|
Pathogenic |
Arginine:glycine amidinotransferase deficiency|Fanconi renotubular syndrome 1 [MONDO:MONDO:0012996,MedGen:C2675179,OMIM:612718,Orphanet:35704|MONDO:MONDO:0024525,MedGen:C4551503,OMIM:134600]; Arginine:glycine amidinotransferase deficiency [MONDO:MONDO:0012996,MedGen:C2675179,OMIM:612718,Orphanet:35704] |
|
rs4426527
|
LB/B |
- |
|
rs536205988
|
- |
- |
|
rs543745251
|
- |
- |
|
rs545372800
|
- |
- |
|
rs552474817
|
- |
- |
|
rs555959266
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs556400964
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs556829801
|
Pathogenic |
Cerebral creatine deficiency syndrome|Deficiency of guanidinoacetate methyltransferase [MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172|MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382] |
|
rs56251804
|
- |
- |
|
rs563826316
|
- |
- |
|
rs565509522
|
- |
- |
|
rs56709544
|
- |
- |
|
rs571416651
|
- |
- |
|
rs587777775
|
Pathogenic |
Neu-Laxova syndrome 1 [MONDO:MONDO:0009736,MedGen:C4551478,OMIM:256520,Orphanet:2671,Orphanet:583607] |
|
rs587777777
|
LP/P |
Neu-Laxova syndrome 2 (NLS2) [MIM:616038] |
|
rs61729604
|
- |
- |
|
rs73106685
|
LB/B |
- |
|
rs74205173
|
- |
- |
|
rs74451421
|
- |
- |
|
rs746575551
|
Likely pathogenic |
Classic homocystinuria [MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394] |
|
rs747043550
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs747089244
|
- |
- |
|
rs747209153
|
- |
- |
|
rs747608698
|
- |
- |
|
rs748682601
|
Pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs748683840
|
- |
- |
|
rs749568989
|
- |
- |
|
rs750389182
|
- |
- |
|
rs750905647
|
- |
- |
|
rs751894166
|
- |
- |
|
rs751972865
|
LP/P |
Erythrocytosis, familial, 8 (ECYT8) [MIM:222800] |
|
rs753228876
|
- |
- |
|
rs754079169
|
- |
- |
|
rs755757711
|
- |
- |
|
rs755952006
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs755952006
|
Pathogenic/Likely pathogenic |
Classic homocystinuria|Homocystinuria|HYPERHOMOCYSTEINEMIA, THROMBOTIC, CBS-RELATED|Familial thoracic aortic aneurysm and aortic dissection|not provided [MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394|Human Phenotype Ontology:HP:0002156,MONDO:MONDO:0004737,MedGen:C0019880|MedGen:C3150344|MONDO:MONDO:0019625,MedGen:C4707243,OMIM:PS607086,Orphanet:91387|MedGen:C3661900] |
|
rs756437332
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs757087726
|
Pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs757985056
|
- |
- |
|
rs758066653
|
- |
- |
|
rs758236584
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs758916006
|
- |
- |
|
rs759502207
|
- |
- |
|
rs75967634
|
- |
- |
|
rs759784953
|
- |
- |
|
rs759836341
|
- |
- |
|
rs760055363
|
- |
- |
|
rs760214620
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs760782027
|
- |
- |
|
rs761042153
|
- |
- |
|
rs761295869
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs761647392
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs761734491
|
- |
- |
|
rs762065361
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs762757818
|
- |
- |
|
rs762922297
|
- |
- |
|
rs763392896
|
- |
- |
|
rs763835246
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs765070826
|
- |
- |
|
rs765649468
|
- |
- |
|
rs765910470
|
- |
- |
|
rs766149888
|
- |
- |
|
rs766553422
|
- |
- |
|
rs768492092
|
- |
- |
|
rs768697532
|
- |
- |
|
rs769763635
|
- |
- |
|
rs771298943
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs771298943
|
Pathogenic/Likely pathogenic |
Classic homocystinuria|not provided|Homocystinuria|HYPERHOMOCYSTEINEMIA, THROMBOTIC, CBS-RELATED|Familial thoracic aortic aneurysm and aortic dissection [MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394|MedGen:C3661900|Human Phenotype Ontology:HP:0002156,MONDO:MONDO:0004737,MedGen:C0019880|MedGen:C3150344|MONDO:MONDO:0019625,MedGen:C4707243,OMIM:PS607086,Orphanet:91387] |
|
rs771385956
|
- |
- |
|
rs773503933
|
- |
- |
|
rs773734233
|
- |
- |
|
rs773734233
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs774144200
|
LP/P |
Cerebral creatine deficiency syndrome 2 (CCDS2) [MIM:612736] |
|
rs774144200
|
Pathogenic |
Cerebral creatine deficiency syndrome|Deficiency of guanidinoacetate methyltransferase [MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172|MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382] |
|
rs774423823
|
- |
- |
|
rs775708778
|
- |
- |
|
rs776400068
|
- |
- |
|
rs776421832
|
- |
- |
|
rs779013628
|
- |
- |
|
rs779270933
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs780172339
|
- |
- |
|
rs781222092
|
Pathogenic |
Deficiency of bisphosphoglycerate mutase [MONDO:MONDO:0009113,MedGen:C1291620,OMIM:222800,Orphanet:714] |
|
rs781266642
|
- |
- |
|
rs781510366
|
- |
- |
|
rs78599516
|
- |
- |
|
rs786204545
|
- |
- |
|
rs786204545
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052057
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052059
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052060
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052061
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs796052062
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052063
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052064
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs796052065
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052066
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052079
|
- |
- |
|
rs796052079
|
Pathogenic |
Primary hyperoxaluria, type II [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599] |
|
rs796052271
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs80338734
|
LP/P |
Cerebral creatine deficiency syndrome 2 (CCDS2) [MIM:612736] |
|
rs80338734
|
Pathogenic |
Deficiency of guanidinoacetate methyltransferase|Cerebral creatine deficiency syndrome|not provided|See cases|Inborn genetic diseases [MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382|MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172|MedGen:C3661900||MeSH:D030342,MedGen:C0950123] |
|
rs864321678
|
LP/P |
Glycine N-methyltransferase deficiency (GNMT deficiency) [MIM:606664] |
|
rs864622558
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs886054247
|
Pathogenic |
Deficiency of guanidinoacetate methyltransferase|Cerebral creatine deficiency syndrome [MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382|MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172] |
|
rs891042971
|
Likely pathogenic |
Cerebral creatine deficiency syndrome|Deficiency of guanidinoacetate methyltransferase [MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172|MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382] |
|
rs935315768
|
- |
- |
|
rs946974235
|
- |
- |
|
rs964520949
|
- |
- |
rn00261
|
Monobactam biosynthesis
|
dbSNP |
Type |
Disease name |
|
.
|
- |
- |
|
rs1357895717
|
- |
- |
|
rs140928408
|
- |
- |
|
rs145370575
|
- |
- |
|
rs183618664
|
- |
- |
|
rs769879789
|
- |
- |
|
rs775097749
|
- |
- |
hsa00270
|
Cysteine and methionine metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
-
|
Likely pathogenic |
Classic homocystinuria [MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394] |
|
-
|
LP/P |
Immunodeficiency-centromeric instability-facial anomalies syndrome 1 (ICF1) [MIM:242860] |
|
-
|
Likely pathogenic |
Hepatic methionine adenosyltransferase deficiency [MONDO:MONDO:0009607,MedGen:C0268621,OMIM:250850,Orphanet:168598] |
|
-
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
-
|
Likely pathogenic |
Syndromic X-linked intellectual disability Snyder type [MONDO:MONDO:0010664,MedGen:C0796160,OMIM:309583,Orphanet:3063] |
|
-
|
LP/P |
Phosphoserine aminotransferase deficiency (PSATD) [MIM:610992] |
|
-
|
Pathogenic |
Glycogen storage disease due to lactate dehydrogenase M-subunit deficiency [MONDO:MONDO:0013047,MedGen:C2931743,OMIM:612933,Orphanet:284426] |
|
-
|
Pathogenic |
Hypermethioninemia with deficiency of S-adenosylhomocysteine hydrolase [MONDO:MONDO:0013404,MedGen:C3151058,OMIM:613752,Orphanet:88618] |
|
-
|
LP/P |
Neu-Laxova syndrome 2 (NLS2) [MIM:616038] |
|
-
|
Pathogenic |
Centromeric instability of chromosomes 1,9 and 16 and immunodeficiency [MONDO:MONDO:0000133,MedGen:C0398788,OMIM:PS242860,Orphanet:2268] |
|
.
|
- |
- |
|
rs1011808569
|
- |
- |
|
rs1018955701
|
- |
- |
|
rs1019608054
|
- |
- |
|
rs1170128038
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs118203916
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
rs118204001
|
Likely pathogenic |
Hepatic methionine adenosyltransferase deficiency [MONDO:MONDO:0009607,MedGen:C0268621,OMIM:250850,Orphanet:168598] |
|
rs118204005
|
Pathogenic |
Hepatic methionine adenosyltransferase deficiency [MONDO:MONDO:0009607,MedGen:C0268621,OMIM:250850,Orphanet:168598] |
|
rs1191141364
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs1213395414
|
- |
- |
|
rs121908943
|
Likely pathogenic |
Immunodeficiency-centromeric instability-facial anomalies syndrome 1|Centromeric instability of chromosomes 1,9 and 16 and immunodeficiency [MONDO:MONDO:0009454,MedGen:C4551557,OMIM:242860,Orphanet:2268|MONDO:MONDO:0000133,MedGen:C0398788,OMIM:PS242860,Orphanet:2268] |
|
rs121913580
|
Pathogenic |
Methylcobalamin deficiency type cblG [MONDO:MONDO:0009609,MedGen:C1855128,OMIM:250940,Orphanet:2170,Orphanet:622] |
|
rs121964962
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs121964962
|
Pathogenic |
Homocystinuria, pyridoxine-nonresponsive|HYPERHOMOCYSTEINEMIA, THROMBOTIC, CBS-RELATED|not provided|Classic homocystinuria|Homocystinuria|Familial thoracic aortic aneurysm and aortic dissection [MedGen:C4017308|MedGen:C3150344|MedGen:C3661900|MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394|Human Phenotype Ontology:HP:0002156,MONDO:MONDO:0004737,MedGen:C0019880|MONDO:MONDO:0019625,MedGen:C4707243,OMIM:PS607086,Orphanet:91387] |
|
rs121964963
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs121964966
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs121964967
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs121964968
|
- |
- |
|
rs121964968
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs121964969
|
- |
- |
|
rs121964969
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs121964969
|
Pathogenic/Likely pathogenic |
Homocystinuria, pyridoxine-responsive|Classic homocystinuria|Homocystinuria|HYPERHOMOCYSTEINEMIA, THROMBOTIC, CBS-RELATED|not provided|Familial thoracic aortic aneurysm and aortic dissection [MedGen:C3502110|MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394|Human Phenotype Ontology:HP:0002156,MONDO:MONDO:0004737,MedGen:C0019880|MedGen:C3150344|MedGen:C3661900|MONDO:MONDO:0019625,MedGen:C4707243,OMIM:PS607086,Orphanet:91387] |
|
rs121964970
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs121964972
|
- |
- |
|
rs121964972
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs1234354755
|
Pathogenic |
Classic homocystinuria|HYPERHOMOCYSTEINEMIA, THROMBOTIC, CBS-RELATED [MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394|MedGen:C3150344] |
|
rs1241692940
|
Pathogenic |
Hepatic methionine adenosyltransferase deficiency [MONDO:MONDO:0009607,MedGen:C0268621,OMIM:250850,Orphanet:168598] |
|
rs1304669003
|
Pathogenic |
Classic homocystinuria|not provided [MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394|MedGen:CN517202] |
|
rs1311224546
|
- |
- |
|
rs1325669112
|
Pathogenic |
Kleefstra syndrome 1 [MONDO:MONDO:0027407,MedGen:C0795833,OMIM:610253,Orphanet:261494] |
|
rs1347651454
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs1347651454
|
Pathogenic |
Homocystinuria|Familial thoracic aortic aneurysm and aortic dissection|HYPERHOMOCYSTEINEMIA, THROMBOTIC, CBS-RELATED|See cases|Classic homocystinuria [Human Phenotype Ontology:HP:0002156,MONDO:MONDO:0004737,MedGen:C0019880|MONDO:MONDO:0019625,MedGen:C4707243,OMIM:PS607086,Orphanet:91387|MedGen:C3150344||MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394] |
|
rs1366833576
|
- |
- |
|
rs137852727
|
Likely pathogenic |
Kleefstra syndrome 1 [MONDO:MONDO:0027407,MedGen:C0795833,OMIM:610253,Orphanet:261494] |
|
rs138556525
|
Pathogenic |
not provided|Hepatic methionine adenosyltransferase deficiency|MAT1A-related condition [MedGen:C3661900|MONDO:MONDO:0009607,MedGen:C0268621,OMIM:250850,Orphanet:168598|] |
|
rs139166171
|
- |
- |
|
rs1408616607
|
- |
- |
|
rs142847271
|
- |
- |
|
rs143124288
|
Pathogenic/Likely pathogenic |
HYPERHOMOCYSTEINEMIA, THROMBOTIC, CBS-RELATED|Homocystinuria|Classic homocystinuria [MedGen:C3150344|Human Phenotype Ontology:HP:0002156,MONDO:MONDO:0004737,MedGen:C0019880|MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394] |
|
rs1438933819
|
Pathogenic |
Classic homocystinuria [MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394] |
|
rs144503922
|
- |
- |
|
rs144739734
|
- |
- |
|
rs1463626619
|
- |
- |
|
rs1464223176
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs1467808566
|
- |
- |
|
rs147044875
|
- |
- |
|
rs1477651398
|
- |
- |
|
rs149119723
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs1555874803
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs1602210346
|
Pathogenic |
Syndromic X-linked intellectual disability Snyder type [MONDO:MONDO:0010664,MedGen:C0796160,OMIM:309583,Orphanet:3063] |
|
rs1662641467
|
Likely pathogenic |
Methylcobalamin deficiency type cblG [MONDO:MONDO:0009609,MedGen:C1855128,OMIM:250940,Orphanet:2170,Orphanet:622] |
|
rs181309650
|
- |
- |
|
rs182600362
|
- |
- |
|
rs184074326
|
- |
- |
|
rs1924648986
|
Likely pathogenic |
Syndromic X-linked intellectual disability Snyder type [MONDO:MONDO:0010664,MedGen:C0796160,OMIM:309583,Orphanet:3063] |
|
rs1924650670
|
Pathogenic |
Syndromic X-linked intellectual disability Snyder type [MONDO:MONDO:0010664,MedGen:C0796160,OMIM:309583,Orphanet:3063] |
|
rs1982601982
|
Likely pathogenic |
Classic homocystinuria [MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394] |
|
rs199586854
|
- |
- |
|
rs199682939
|
- |
- |
|
rs200543916
|
- |
- |
|
rs201222740
|
- |
- |
|
rs201256313
|
- |
- |
|
rs202103028
|
LP/P |
Neu-Laxova syndrome 2 (NLS2) [MIM:616038] |
|
rs2044180572
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
rs267606947
|
LP/P |
Phosphoglycerate dehydrogenase deficiency (PHGDHD) [MIM:601815] |
|
rs267606949
|
LP/P |
Phosphoglycerate dehydrogenase deficiency (PHGDHD) [MIM:601815] |
|
rs267607076
|
LP/P |
Intellectual developmental disorder, X-linked, syndromic, Snyder-Robinson type (MRXSSR) [MIM:309583] |
|
rs28941786
|
LP/P |
Cystathioninuria (CSTNU) [MIM:219500] |
|
rs369011114
|
- |
- |
|
rs371260220
|
- |
- |
|
rs3733890
|
- |
- |
|
rs373782713
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs373782713
|
Pathogenic |
Classic homocystinuria|Homocystinuria|not provided|HYPERHOMOCYSTEINEMIA, THROMBOTIC, CBS-RELATED|Familial thoracic aortic aneurysm and aortic dissection [MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394|Human Phenotype Ontology:HP:0002156,MONDO:MONDO:0004737,MedGen:C0019880|MedGen:C3661900|MedGen:C3150344|MONDO:MONDO:0019625,MedGen:C4707243,OMIM:PS607086,Orphanet:91387] |
|
rs397515551
|
Pathogenic |
Syndromic X-linked intellectual disability Snyder type [MONDO:MONDO:0010664,MedGen:C0796160,OMIM:309583,Orphanet:3063] |
|
rs555959266
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs563826316
|
- |
- |
|
rs56709544
|
- |
- |
|
rs57884381
|
- |
- |
|
rs587777775
|
Pathogenic |
Neu-Laxova syndrome 1 [MONDO:MONDO:0009736,MedGen:C4551478,OMIM:256520,Orphanet:2671,Orphanet:583607] |
|
rs587777777
|
LP/P |
Neu-Laxova syndrome 2 (NLS2) [MIM:616038] |
|
rs72558181
|
Pathogenic |
Hepatic methionine adenosyltransferase deficiency|not provided [MONDO:MONDO:0009607,MedGen:C0268621,OMIM:250850,Orphanet:168598|MedGen:C3661900] |
|
rs745967575
|
- |
- |
|
rs746871094
|
- |
- |
|
rs748780943
|
- |
- |
|
rs749670133
|
- |
- |
|
rs749758704
|
- |
- |
|
rs750515748
|
Pathogenic |
Tatton-Brown-Rahman overgrowth syndrome [MONDO:MONDO:0014382,MedGen:C4014545,OMIM:615879,Orphanet:404443] |
|
rs750849178
|
LP/P |
Immunodeficiency-centromeric instability-facial anomalies syndrome 1 (ICF1) [MIM:242860] |
|
rs755052126
|
- |
- |
|
rs755106884
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs755757711
|
- |
- |
|
rs755952006
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs755952006
|
Pathogenic/Likely pathogenic |
Classic homocystinuria|Homocystinuria|HYPERHOMOCYSTEINEMIA, THROMBOTIC, CBS-RELATED|Familial thoracic aortic aneurysm and aortic dissection|not provided [MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394|Human Phenotype Ontology:HP:0002156,MONDO:MONDO:0004737,MedGen:C0019880|MedGen:C3150344|MONDO:MONDO:0019625,MedGen:C4707243,OMIM:PS607086,Orphanet:91387|MedGen:C3661900] |
|
rs758236584
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs758916006
|
- |
- |
|
rs759502207
|
- |
- |
|
rs760055363
|
- |
- |
|
rs760214620
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs761647392
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs762065361
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs763764381
|
- |
- |
|
rs763835246
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs764303638
|
- |
- |
|
rs765582096
|
- |
- |
|
rs765882602
|
- |
- |
|
rs766149888
|
- |
- |
|
rs766480924
|
- |
- |
|
rs768158086
|
- |
- |
|
rs771011269
|
- |
- |
|
rs771298943
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs771298943
|
Pathogenic/Likely pathogenic |
Classic homocystinuria|not provided|Homocystinuria|HYPERHOMOCYSTEINEMIA, THROMBOTIC, CBS-RELATED|Familial thoracic aortic aneurysm and aortic dissection [MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394|MedGen:C3661900|Human Phenotype Ontology:HP:0002156,MONDO:MONDO:0004737,MedGen:C0019880|MedGen:C3150344|MONDO:MONDO:0019625,MedGen:C4707243,OMIM:PS607086,Orphanet:91387] |
|
rs773734233
|
- |
- |
|
rs773734233
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs774423823
|
- |
- |
|
rs777019739
|
- |
- |
|
rs777459947
|
- |
- |
|
rs777954556
|
LP/P |
Lactate dehydrogenase B deficiency (LDHBD) [MIM:614128] |
|
rs779270933
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs780172339
|
- |
- |
|
rs780634137
|
- |
- |
|
rs781266642
|
- |
- |
|
rs781510366
|
- |
- |
|
rs781739244
|
- |
- |
|
rs782308462
|
LP/P |
Developmental and epileptic encephalopathy 51 (DEE51) [MIM:617339] |
|
rs864321678
|
LP/P |
Glycine N-methyltransferase deficiency (GNMT deficiency) [MIM:606664] |
|
rs866792483
|
US |
Immunodeficiency-centromeric instability-facial anomalies syndrome 1 (ICF1) [MIM:242860] |
|
rs867732105
|
LP/P |
Immunodeficiency-centromeric instability-facial anomalies syndrome 1 (ICF1) [MIM:242860] |
|
rs886037776
|
Pathogenic |
Autism spectrum disorder [MONDO:MONDO:0005258,MeSH:D000067877,MedGen:C1510586,Orphanet:106]; Kleefstra syndrome 1 [MONDO:MONDO:0027407,MedGen:C0795833,OMIM:610253,Orphanet:261494] |
|
rs946974235
|
- |
- |
hsa00280
|
Valine, leucine and isoleucine degradation
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
-
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
-
|
LP/P |
Succinyl-CoA:3-oxoacid CoA transferase deficiency (SCOTD) [MIM:245050] |
|
-
|
LP/P |
3-hydroxy-3-methylglutaryl-CoA lyase deficiency (HMGCLD) [MIM:246450] |
|
-
|
Likely pathogenic |
Deficiency of hydroxymethylglutaryl-CoA lyase [MONDO:MONDO:0009520,MedGen:C0268601,OMIM:246450,Orphanet:20] |
|
-
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
-
|
US |
Maple syrup urine disease 1A (MSUD1A) [MIM:248600] |
|
-
|
Pathogenic |
Beta-hydroxyisobutyryl-CoA deacylase deficiency [MONDO:MONDO:0009603,MedGen:C0342738,OMIM:250620,Orphanet:88639] |
|
-
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
-
|
Likely pathogenic |
HSD10 mitochondrial disease [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295] |
|
-
|
Pathogenic |
Gamma-aminobutyric acid transaminase deficiency [MONDO:MONDO:0013166,MedGen:C0342708,OMIM:613163,Orphanet:2066] |
|
-
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
-
|
Likely pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
.
|
- |
- |
|
rs1014048269
|
- |
- |
|
rs1025180934
|
- |
- |
|
rs1025180934
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1037467160
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1040238997
|
- |
- |
|
rs1040881767
|
Likely pathogenic |
3-methylglutaconic aciduria type 1 [MONDO:MONDO:0009610,MedGen:C0342727,OMIM:250950,Orphanet:67046] |
|
rs104886492
|
US |
HSD10 mitochondrial disease (HSD10MD) [MIM:300438] |
|
rs1057516564
|
Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs1170817007
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1184088336
|
- |
- |
|
rs1184088336
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs120074140
|
LP/P |
3-ketothiolase deficiency (3KTD) [MIM:203750] |
|
rs120074141
|
LP/P |
3-ketothiolase deficiency (3KTD) [MIM:203750] |
|
rs120074144
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase|not provided [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134|MedGen:C3661900] |
|
rs120074146
|
- |
- |
|
rs120074146
|
LP/P |
3-ketothiolase deficiency (3KTD) [MIM:203750] |
|
rs120074147
|
- |
- |
|
rs120074147
|
LP/P |
3-ketothiolase deficiency (3KTD) [MIM:203750] |
|
rs1202368985
|
- |
- |
|
rs121434275
|
LP/P |
Acyl-CoA dehydrogenase medium-chain deficiency (ACADMD) [MIM:201450] |
|
rs121434278
|
- |
- |
|
rs121434278
|
LP/P |
Acyl-CoA dehydrogenase medium-chain deficiency (ACADMD) [MIM:201450] |
|
rs121434279
|
LP/P |
Acyl-CoA dehydrogenase medium-chain deficiency (ACADMD) [MIM:201450] |
|
rs121434281
|
LP/P |
Acyl-CoA dehydrogenase medium-chain deficiency (ACADMD) [MIM:201450] |
|
rs121434283
|
LP/P |
Acyl-CoA dehydrogenase medium-chain deficiency (ACADMD) [MIM:201450] |
|
rs121434578
|
Pathogenic |
Gamma-aminobutyric acid transaminase deficiency [MONDO:MONDO:0013166,MedGen:C0342708,OMIM:613163,Orphanet:2066] |
|
rs121434636
|
Pathogenic |
3-methylglutaconic aciduria type 1|not provided [MONDO:MONDO:0009610,MedGen:C0342727,OMIM:250950,Orphanet:67046|MedGen:C3661900] |
|
rs121909301
|
LP/P |
Succinyl-CoA:3-oxoacid CoA transferase deficiency (SCOTD) [MIM:245050] |
|
rs121912707
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Seizure|Pyridoxine-dependent epilepsy caused by ALDH7A1 mutant [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|Human Phenotype Ontology:HP:0001250,Human Phenotype Ontology:HP:0001275,Human Phenotype Ontology:HP:0001303,Human Phenotype Ontology:HP:0002125,Human Phenotype Ontology:HP:0002182,Human Phenotype Ontology:HP:0002279,Human Phenotype Ontology:HP:0002306,Human Phenotype Ontology:HP:0002348,Human Phenotype Ontology:HP:0002391,Human Phenotype Ontology:HP:0002417,Human Phenotype Ontology:HP:0002430,Human Phenotype Ontology:HP:0002431,Human Phenotype Ontology:HP:0002432,Human Phenotype Ontology:HP:0002434,Human Phenotype Ontology:HP:0002437,Human Phenotype Ontology:HP:0002466,Human Phenotype Ontology:HP:0002479,Human Phenotype Ontology:HP:0002794,Human Phenotype Ontology:HP:0006997,Human Phenotype Ontology:HP:0010520,MedGen:C0036572|MONDO:MONDO:0020741,MedGen:CN293409] |
|
rs121912711
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs121918329
|
LP/P |
3-hydroxyisobutryl-CoA hydrolase deficiency (HIBCHD) [MIM:250620] |
|
rs121964988
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs121964991
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs121964993
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs121964997
|
Pathogenic |
Deficiency of hydroxymethylglutaryl-CoA lyase|not provided|Long chain 3-hydroxyacyl-CoA dehydrogenase deficiency [MONDO:MONDO:0009520,MedGen:C0268601,OMIM:246450,Orphanet:20|MedGen:C3661900|MONDO:MONDO:0012173,MedGen:C3711645,OMIM:609016,Orphanet:5] |
|
rs121964999
|
Pathogenic/Likely pathogenic |
not provided|Maple syrup urine disease|See cases|Maple syrup urine disease type 2 [MedGen:C3661900|MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511||MONDO:MONDO:0023693,MedGen:C1855371,OMIM:620699] |
|
rs121965002
|
Pathogenic |
Maple syrup urine disease type 2 [MONDO:MONDO:0023693,MedGen:C1855371,OMIM:620699] |
|
rs1220952473
|
- |
- |
|
rs122461163
|
Pathogenic |
HSD10 mitochondrial disease [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295] |
|
rs122462164
|
Pathogenic |
HSD10 mitochondrial disease [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295] |
|
rs1233969418
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1234657138
|
- |
- |
|
rs1260394550
|
Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs1265872256
|
- |
- |
|
rs1278227329
|
Pathogenic/Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase|not provided [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134|MedGen:C3661900] |
|
rs1289541397
|
- |
- |
|
rs1303770209
|
Pathogenic/Likely pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs1311982393
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1327401976
|
LP/P |
Succinyl-CoA:3-oxoacid CoA transferase deficiency (SCOTD) [MIM:245050] |
|
rs1330753702
|
- |
- |
|
rs1333327173
|
- |
- |
|
rs1338023969
|
Pathogenic/Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1348504554
|
Likely pathogenic |
HSD10 mitochondrial disease [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295] |
|
rs1357271377
|
US |
A colorectal cancer sample |
|
rs1357942068
|
LP/P |
3-hydroxy-3-methylglutaryl-CoA lyase deficiency (HMGCLD) [MIM:246450] |
|
rs1364971527
|
Pathogenic/Likely pathogenic |
Beta-hydroxyisobutyryl-CoA deacylase deficiency|See cases [MONDO:MONDO:0009603,MedGen:C0342738,OMIM:250620,Orphanet:88639|] |
|
rs137852640
|
Pathogenic |
3-hydroxy-3-methylglutaryl-CoA synthase deficiency [MONDO:MONDO:0011614,MedGen:C2751532,OMIM:605911,Orphanet:35701] |
|
rs137852873
|
US |
Maple syrup urine disease 1A (MSUD1A) [MIM:248600] |
|
rs137853096
|
LP/P |
D-bifunctional protein deficiency (DBPD) [MIM:261515] |
|
rs137853101
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs137853102
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs1392361503
|
Pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs141786030
|
LB/B |
- |
|
rs1420321267
|
LP/P |
3-ketothiolase deficiency (3KTD) [MIM:203750] |
|
rs1437567292
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1445870588
|
- |
- |
|
rs145838142
|
Pathogenic/Likely pathogenic |
3-hydroxy-3-methylglutaryl-CoA synthase deficiency [MONDO:MONDO:0011614,MedGen:C2751532,OMIM:605911,Orphanet:35701] |
|
rs1467808566
|
- |
- |
|
rs1467902610
|
LP/P |
3-hydroxy-3-methylglutaryl-CoA lyase deficiency (HMGCLD) [MIM:246450] |
|
rs148032473
|
- |
- |
|
rs148639841
|
LP/P |
3-ketothiolase deficiency (3KTD) [MIM:203750] |
|
rs1553131940
|
LP/P |
3-hydroxy-3-methylglutaryl-CoA lyase deficiency (HMGCLD) [MIM:246450] |
|
rs1553132209
|
Pathogenic |
Deficiency of hydroxymethylglutaryl-CoA lyase [MONDO:MONDO:0009520,MedGen:C0268601,OMIM:246450,Orphanet:20] |
|
rs1557466604
|
Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs1561442127
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs1565288701
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1565291981
|
- |
- |
|
rs1570876467
|
Pathogenic/Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs1579903197
|
Likely pathogenic |
Succinyl-CoA acetoacetate transferase deficiency [MONDO:MONDO:0009492,MedGen:C0342792,OMIM:245050,Orphanet:832] |
|
rs1591363715
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1591363760
|
Pathogenic/Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1591363786
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1591367592
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1591374629
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1591374632
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1602426573
|
Likely pathogenic |
HSD10 mitochondrial disease [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295] |
|
rs1638619737
|
Likely pathogenic |
Deficiency of hydroxymethylglutaryl-CoA lyase [MONDO:MONDO:0009520,MedGen:C0268601,OMIM:246450,Orphanet:20] |
|
rs1652875135
|
Likely pathogenic |
3-hydroxy-3-methylglutaryl-CoA synthase deficiency [MONDO:MONDO:0011614,MedGen:C2751532,OMIM:605911,Orphanet:35701] |
|
rs1661796496
|
Likely pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs1750309299
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1750388096
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1827482942
|
Likely pathogenic |
3-methylglutaconic aciduria type 1 [MONDO:MONDO:0009610,MedGen:C0342727,OMIM:250950,Orphanet:67046] |
|
rs182923857
|
LP/P |
Maple syrup urine disease 1A (MSUD1A) [MIM:248600] |
|
rs191644614
|
- |
- |
|
rs199524907
|
Pathogenic/Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase|not provided [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134|MedGen:C3661900] |
|
rs199587895
|
LP/P |
3-hydroxy-3-methylglutaryl-CoA lyase deficiency (HMGCLD) [MIM:246450] |
|
rs200030276
|
Likely pathogenic |
3-methylglutaconic aciduria type 1 [MONDO:MONDO:0009610,MedGen:C0342727,OMIM:250950,Orphanet:67046] |
|
rs200189529
|
Likely pathogenic |
Deficiency of hydroxymethylglutaryl-CoA lyase [MONDO:MONDO:0009520,MedGen:C0268601,OMIM:246450,Orphanet:20] |
|
rs200207185
|
- |
- |
|
rs200940532
|
- |
- |
|
rs200955062
|
- |
- |
|
rs201397255
|
- |
- |
|
rs201948406
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Inborn genetic diseases [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs202015012
|
- |
- |
|
rs2032247686
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs2032282970
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs2075824424
|
Likely pathogenic |
HSD10 mitochondrial disease [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295] |
|
rs2100417374
|
Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs2100417476
|
Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs2100453612
|
Pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs2100779419
|
Pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs2100779875
|
Likely pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs2100797134
|
Pathogenic |
Maple syrup urine disease type 2|Maple syrup urine disease [MONDO:MONDO:0023693,MedGen:C1855371,OMIM:620699|MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs2134768688
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs2134768866
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs2135336400
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs2148424154
|
Pathogenic |
Deficiency of hydroxymethylglutaryl-CoA lyase [MONDO:MONDO:0009520,MedGen:C0268601,OMIM:246450,Orphanet:20] |
|
rs2148425853
|
Pathogenic |
Deficiency of hydroxymethylglutaryl-CoA lyase [MONDO:MONDO:0009520,MedGen:C0268601,OMIM:246450,Orphanet:20] |
|
rs28935475
|
Pathogenic |
HSD10 mitochondrial disease|not provided [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295|MedGen:C3661900] |
|
rs367938014
|
- |
- |
|
rs368127499
|
- |
- |
|
rs368688262
|
- |
- |
|
rs369643387
|
Pathogenic |
Succinyl-CoA acetoacetate transferase deficiency [MONDO:MONDO:0009492,MedGen:C0342792,OMIM:245050,Orphanet:832] |
|
rs371807385
|
- |
- |
|
rs371834662
|
- |
- |
|
rs372660425
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs377295639
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs377316171
|
- |
- |
|
rs387906755
|
Pathogenic |
3-methylglutaconic aciduria type 1|not provided [MONDO:MONDO:0009610,MedGen:C0342727,OMIM:250950,Orphanet:67046|MedGen:CN517202] |
|
rs387906756
|
Pathogenic |
3-methylglutaconic aciduria type 1 [MONDO:MONDO:0009610,MedGen:C0342727,OMIM:250950,Orphanet:67046] |
|
rs398123503
|
LP/P |
Maple syrup urine disease 1A (MSUD1A) [MIM:248600] |
|
rs398123503
|
Pathogenic/Likely pathogenic |
Maple syrup urine disease|not provided [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511|MedGen:C3661900] |
|
rs398123675
|
Pathogenic |
not provided|Maple syrup urine disease [MedGen:C3661900|MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs540242322
|
- |
- |
|
rs541517496
|
Pathogenic/Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs550705310
|
- |
- |
|
rs561279065
|
- |
- |
|
rs56199635
|
LB/B |
- |
|
rs577954688
|
- |
- |
|
rs587688416
|
Likely pathogenic |
3-hydroxy-3-methylglutaryl-CoA synthase deficiency [MONDO:MONDO:0011614,MedGen:C2751532,OMIM:605911,Orphanet:35701] |
|
rs62626305
|
Pathogenic |
HSD10 mitochondrial disease [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295] |
|
rs727503963
|
LP/P |
3-hydroxy-3-methylglutaryl-CoA lyase deficiency (HMGCLD) [MIM:246450] |
|
rs727503963
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of hydroxymethylglutaryl-CoA lyase|Long chain 3-hydroxyacyl-CoA dehydrogenase deficiency|HMGCL-related condition [MedGen:C3661900|MONDO:MONDO:0009520,MedGen:C0268601,OMIM:246450,Orphanet:20|MONDO:MONDO:0012173,MedGen:C3711645,OMIM:609016,Orphanet:5|] |
|
rs74428123
|
- |
- |
|
rs745844469
|
Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs747714452
|
Pathogenic/Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs748303093
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of acetyl-CoA acetyltransferase [MedGen:C3661900|MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs748318386
|
Pathogenic/Likely pathogenic |
not provided|Inborn genetic diseases|3-methylglutaconic aciduria type 1 [MedGen:C3661900|MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0009610,MedGen:C0342727,OMIM:250950,Orphanet:67046] |
|
rs748337518
|
- |
- |
|
rs748682601
|
Pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs748725086
|
- |
- |
|
rs749866079
|
LP/P |
Hypervalinemia and hyperleucine-isoleucinemia (HVLI) [MIM:618850] |
|
rs750195919
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs750594890
|
Pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs753816946
|
- |
- |
|
rs755255464
|
- |
- |
|
rs757087726
|
Pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs757956611
|
- |
- |
|
rs760106433
|
LP/P |
3-hydroxy-3-methylglutaryl-CoA lyase deficiency (HMGCLD) [MIM:246450] |
|
rs761295869
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs761996996
|
Pathogenic/Likely pathogenic |
Maple syrup urine disease|not provided [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511|MedGen:C3661900] |
|
rs762211049
|
Likely pathogenic |
3-hydroxy-3-methylglutaryl-CoA synthase deficiency [MONDO:MONDO:0011614,MedGen:C2751532,OMIM:605911,Orphanet:35701] |
|
rs764039230
|
- |
- |
|
rs765045050
|
Likely pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs765198174
|
Likely pathogenic |
Deficiency of hydroxymethylglutaryl-CoA lyase [MONDO:MONDO:0009520,MedGen:C0268601,OMIM:246450,Orphanet:20] |
|
rs765257706
|
Likely pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs765582096
|
- |
- |
|
rs768448235
|
- |
- |
|
rs768495738
|
- |
- |
|
rs769688327
|
LP/P |
Maple syrup urine disease 1A (MSUD1A) [MIM:248600] |
|
rs769894315
|
LP/P |
3-methylglutaconic aciduria 1 (MGCA1) [MIM:250950] |
|
rs770114459
|
Pathogenic |
Beta-hydroxyisobutyryl-CoA deacylase deficiency [MONDO:MONDO:0009603,MedGen:C0342738,OMIM:250620,Orphanet:88639] |
|
rs770225915
|
Pathogenic/Likely pathogenic |
Deficiency of hydroxymethylglutaryl-CoA lyase|Long chain 3-hydroxyacyl-CoA dehydrogenase deficiency [MONDO:MONDO:0009520,MedGen:C0268601,OMIM:246450,Orphanet:20|MONDO:MONDO:0012173,MedGen:C3711645,OMIM:609016,Orphanet:5] |
|
rs773048903
|
Pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs773491386
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs773503933
|
- |
- |
|
rs773677327
|
Pathogenic/Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency|not provided [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42|MedGen:C3661900] |
|
rs776400068
|
- |
- |
|
rs776421832
|
- |
- |
|
rs779135938
|
Likely pathogenic |
Deficiency of 3-hydroxyacyl-CoA dehydrogenase|Hyperinsulinemic hypoglycemia|Hyperinsulinemic hypoglycemia, familial, 4 [MONDO:MONDO:0017715,MedGen:C1291230,OMIM:231530,Orphanet:309127,Orphanet:71212|Human Phenotype Ontology:HP:0000825,MONDO:MONDO:0005803,MedGen:C1864903,OMIM:PS256450,Orphanet:443095|MONDO:MONDO:0012382,MedGen:C1864948,OMIM:609975,Orphanet:71212] |
|
rs779230138
|
- |
- |
|
rs779820787
|
- |
- |
|
rs780486838
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs780634137
|
- |
- |
|
rs781555217
|
Pathogenic |
Gamma-aminobutyric acid transaminase deficiency [MONDO:MONDO:0013166,MedGen:C0342708,OMIM:613163,Orphanet:2066] |
|
rs796052271
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs864622558
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs869312125
|
Pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs875989867
|
Pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs886037927
|
Likely pathogenic |
HSD10 mitochondrial disease [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295] |
|
rs886041122
|
LP/P |
3-ketothiolase deficiency (3KTD) [MIM:203750] |
|
rs945544963
|
- |
- |
hsa00290
|
Valine, leucine and isoleucine biosynthesis
|
dbSNP |
Type |
Disease name |
|
rs1234657138
|
- |
- |
|
rs1467808566
|
- |
- |
|
rs749866079
|
LP/P |
Hypervalinemia and hyperleucine-isoleucinemia (HVLI) [MIM:618850] |
|
rs765582096
|
- |
- |
|
rs780634137
|
- |
- |
rn00300
|
Lysine biosynthesis
|
dbSNP |
Type |
Disease name |
|
-
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
-
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
.
|
- |
- |
|
rs1170817007
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs118203916
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
rs121912707
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Seizure|Pyridoxine-dependent epilepsy caused by ALDH7A1 mutant [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|Human Phenotype Ontology:HP:0001250,Human Phenotype Ontology:HP:0001275,Human Phenotype Ontology:HP:0001303,Human Phenotype Ontology:HP:0002125,Human Phenotype Ontology:HP:0002182,Human Phenotype Ontology:HP:0002279,Human Phenotype Ontology:HP:0002306,Human Phenotype Ontology:HP:0002348,Human Phenotype Ontology:HP:0002391,Human Phenotype Ontology:HP:0002417,Human Phenotype Ontology:HP:0002430,Human Phenotype Ontology:HP:0002431,Human Phenotype Ontology:HP:0002432,Human Phenotype Ontology:HP:0002434,Human Phenotype Ontology:HP:0002437,Human Phenotype Ontology:HP:0002466,Human Phenotype Ontology:HP:0002479,Human Phenotype Ontology:HP:0002794,Human Phenotype Ontology:HP:0006997,Human Phenotype Ontology:HP:0010520,MedGen:C0036572|MONDO:MONDO:0020741,MedGen:CN293409] |
|
rs121912711
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs1239594775
|
- |
- |
|
rs1311982393
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1750309299
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1750388096
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs181309650
|
- |
- |
|
rs201835306
|
- |
- |
|
rs201948406
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Inborn genetic diseases [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs2044180572
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
rs372660425
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs556400964
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs761295869
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs762922297
|
- |
- |
|
rs768158086
|
- |
- |
|
rs769204528
|
- |
- |
|
rs773503933
|
- |
- |
|
rs776421832
|
- |
- |
|
rs796052271
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs864622558
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
hsa00310
|
Lysine degradation
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Sotos syndrome (SOTOS) [MIM:117550] |
|
-
|
Likely pathogenic |
Sotos syndrome [MedGen:C0175695,OMIM:117550,Orphanet:821] |
|
-
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
-
|
Likely pathogenic |
Deficiency of 3-hydroxyacyl-CoA dehydrogenase [MONDO:MONDO:0017715,MedGen:C1291230,OMIM:231530,Orphanet:309127,Orphanet:71212] |
|
-
|
Likely pathogenic |
Baraitser-Winter syndrome 1 [MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995]; Developmental malformations-deafness-dystonia syndrome [MONDO:MONDO:0011823,MedGen:C1846331,OMIM:607371,Orphanet:79107] |
|
-
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
-
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
-
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
-
|
LP/P |
Weaver syndrome (WVS) [MIM:277590] |
|
-
|
Likely pathogenic |
Weaver syndrome [MONDO:MONDO:0010193,MedGen:C0265210,OMIM:277590,Orphanet:3447] |
|
-
|
Pathogenic |
Gamma-aminobutyric acid transaminase deficiency [MONDO:MONDO:0013166,MedGen:C0342708,OMIM:613163,Orphanet:2066] |
|
-
|
Likely pathogenic |
Intellectual disability, autosomal dominant 51 [MONDO:MONDO:0030917,MedGen:C4540474,OMIM:617788] |
|
-
|
Pathogenic |
Intellectual disability, autosomal dominant 52 [MONDO:MONDO:0030918,MedGen:C4540478,OMIM:617796] |
|
-
|
LP/P |
Rauch-Steindl syndrome (RAUST) [MIM:619695] |
|
-
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
.
|
- |
- |
|
rs104886492
|
US |
HSD10 mitochondrial disease (HSD10MD) [MIM:300438] |
|
rs1057519904
|
LP/P |
Glioma (GLM) [MIM:137800] |
|
rs1057519904
|
Likely pathogenic |
Brainstem glioma|Squamous cell carcinoma of the head and neck [Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037] |
|
rs1057519905
|
Likely pathogenic |
Brainstem glioma|Squamous cell carcinoma of the head and neck [Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037] |
|
rs1060503430
|
Likely pathogenic |
Weaver syndrome [MONDO:MONDO:0010193,MedGen:C0265210,OMIM:277590,Orphanet:3447] |
|
rs1131692184
|
Likely pathogenic |
Weaver syndrome [MONDO:MONDO:0010193,MedGen:C0265210,OMIM:277590,Orphanet:3447] |
|
rs1170817007
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs118203916
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
rs120074141
|
LP/P |
3-ketothiolase deficiency (3KTD) [MIM:203750] |
|
rs1202368985
|
- |
- |
|
rs121434578
|
Pathogenic |
Gamma-aminobutyric acid transaminase deficiency [MONDO:MONDO:0013166,MedGen:C0342708,OMIM:613163,Orphanet:2066] |
|
rs121912707
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Seizure|Pyridoxine-dependent epilepsy caused by ALDH7A1 mutant [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|Human Phenotype Ontology:HP:0001250,Human Phenotype Ontology:HP:0001275,Human Phenotype Ontology:HP:0001303,Human Phenotype Ontology:HP:0002125,Human Phenotype Ontology:HP:0002182,Human Phenotype Ontology:HP:0002279,Human Phenotype Ontology:HP:0002306,Human Phenotype Ontology:HP:0002348,Human Phenotype Ontology:HP:0002391,Human Phenotype Ontology:HP:0002417,Human Phenotype Ontology:HP:0002430,Human Phenotype Ontology:HP:0002431,Human Phenotype Ontology:HP:0002432,Human Phenotype Ontology:HP:0002434,Human Phenotype Ontology:HP:0002437,Human Phenotype Ontology:HP:0002466,Human Phenotype Ontology:HP:0002479,Human Phenotype Ontology:HP:0002794,Human Phenotype Ontology:HP:0006997,Human Phenotype Ontology:HP:0010520,MedGen:C0036572|MONDO:MONDO:0020741,MedGen:CN293409] |
|
rs121912711
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs121964988
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs121964991
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs121964993
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs1239594775
|
- |
- |
|
rs1311982393
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1312740080
|
- |
- |
|
rs1325669112
|
Pathogenic |
Kleefstra syndrome 1 [MONDO:MONDO:0027407,MedGen:C0795833,OMIM:610253,Orphanet:261494] |
|
rs137852727
|
Likely pathogenic |
Kleefstra syndrome 1 [MONDO:MONDO:0027407,MedGen:C0795833,OMIM:610253,Orphanet:261494] |
|
rs137853096
|
LP/P |
D-bifunctional protein deficiency (DBPD) [MIM:261515] |
|
rs137853101
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs137853102
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs1392361503
|
Pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs140332014
|
- |
- |
|
rs1422752351
|
Pathogenic/Likely pathogenic |
Kabuki syndrome|Kabuki syndrome 1 [MONDO:MONDO:0016512,MedGen:C0796004,OMIM:PS147920,Orphanet:2322|MONDO:MONDO:0007843,MedGen:CN030661,OMIM:147920,Orphanet:2322] |
|
rs1437567292
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs145712373
|
- |
- |
|
rs1478147351
|
US |
Leukemia, acute lymphoblastic (ALL) [MIM:613065] |
|
rs1554481435
|
US |
A patient with chronic myelomonocytic leukemia |
|
rs1555028104
|
US |
Intellectual developmental disorder, autosomal dominant 51 (MRD51) [MIM:617788] |
|
rs1559720382
|
Pathogenic/Likely pathogenic |
Genetic syndrome with a Dandy-Walker malformation as major feature [MedGen:CN274613]; Luscan-Lumish syndrome [MONDO:MONDO:0014791,MedGen:C4085873,OMIM:616831,Orphanet:597738]; Ventriculomegaly|Dandy-Walker syndrome [Human Phenotype Ontology:HP:0002119,Human Phenotype Ontology:HP:0002447,Human Phenotype Ontology:HP:0005691,Human Phenotype Ontology:HP:0007071,MedGen:C3278923|Human Phenotype Ontology:HP:0001305,Human Phenotype Ontology:HP:0001313,Human Phenotype Ontology:HP:0006809,MONDO:MONDO:0009072,MeSH:D003616,MedGen:C0010964,OMIM:220200,Orphanet:217] |
|
rs1561442127
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs1584875099
|
Likely pathogenic |
Weaver syndrome [MONDO:MONDO:0010193,MedGen:C0265210,OMIM:277590,Orphanet:3447] |
|
rs1591374629
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1591374632
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1726909627
|
Pathogenic |
Rauch-Steindl syndrome [MONDO:MONDO:0859219,MedGen:C5562061,OMIM:619695] |
|
rs1740231
|
LB/B |
- |
|
rs1750309299
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1750388096
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1759551453
|
Likely pathogenic |
Sotos syndrome [MedGen:C0175695,OMIM:117550,Orphanet:821] |
|
rs181309650
|
- |
- |
|
rs189221845
|
- |
- |
|
rs193921147
|
LP/P |
Weaver syndrome (WVS) [MIM:277590] |
|
rs199612297
|
- |
- |
|
rs200207185
|
- |
- |
|
rs201215666
|
- |
- |
|
rs201397255
|
- |
- |
|
rs201563672
|
- |
- |
|
rs201626990
|
- |
- |
|
rs201835306
|
- |
- |
|
rs201865375
|
- |
- |
|
rs201865375
|
Pathogenic/Likely pathogenic |
Mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency|not provided [MONDO:MONDO:0014563,MedGen:C4225391,OMIM:616277,Orphanet:255241|MedGen:C3661900] |
|
rs201948406
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Inborn genetic diseases [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs202015012
|
- |
- |
|
rs202071047
|
- |
- |
|
rs202107611
|
- |
- |
|
rs202168145
|
- |
- |
|
rs202214913
|
- |
- |
|
rs2032247686
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs2032282970
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs2044180572
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
rs2108976771
|
Likely pathogenic |
Rauch-Steindl syndrome [MONDO:MONDO:0859219,MedGen:C5562061,OMIM:619695] |
|
rs2109020378
|
Pathogenic |
Rauch-Steindl syndrome [MONDO:MONDO:0859219,MedGen:C5562061,OMIM:619695] |
|
rs2127257578
|
Pathogenic |
Sotos syndrome [MedGen:C0175695,OMIM:117550,Orphanet:821] |
|
rs2129467664
|
Pathogenic |
Weaver syndrome [MONDO:MONDO:0010193,MedGen:C0265210,OMIM:277590,Orphanet:3447] |
|
rs2132792568
|
Pathogenic |
Kleefstra syndrome 1 [MONDO:MONDO:0027407,MedGen:C0795833,OMIM:610253,Orphanet:261494] |
|
rs2134768688
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs2134768866
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs267601394
|
LB/B |
- |
|
rs267601395
|
LB/B |
- |
|
rs367902441
|
- |
- |
|
rs371582393
|
Likely pathogenic |
Mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency [MONDO:MONDO:0014563,MedGen:C4225391,OMIM:616277,Orphanet:255241] |
|
rs371807385
|
- |
- |
|
rs371834662
|
- |
- |
|
rs372660425
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs372764747
|
- |
- |
|
rs375032130
|
Pathogenic/Likely pathogenic |
not provided|Mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency|See cases [MedGen:C3661900|MONDO:MONDO:0014563,MedGen:C4225391,OMIM:616277,Orphanet:255241|] |
|
rs375266808
|
Pathogenic |
Mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency|not provided [MONDO:MONDO:0014563,MedGen:C4225391,OMIM:616277,Orphanet:255241|MedGen:C3661900] |
|
rs397515548
|
US |
Weaver syndrome (WVS) [MIM:277590] |
|
rs541517496
|
Pathogenic/Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs550705310
|
- |
- |
|
rs556400964
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs565913809
|
- |
- |
|
rs575069462
|
- |
- |
|
rs577954688
|
- |
- |
|
rs587783625
|
US |
Weaver syndrome (WVS) [MIM:277590] |
|
rs587783700
|
Likely pathogenic |
Kabuki syndrome 1 [MONDO:MONDO:0007843,MedGen:CN030661,OMIM:147920,Orphanet:2322] |
|
rs587783702
|
Likely pathogenic |
Kabuki syndrome 1 [MONDO:MONDO:0007843,MedGen:CN030661,OMIM:147920,Orphanet:2322] |
|
rs587784160
|
Pathogenic |
Sotos syndrome [MedGen:C0175695,OMIM:117550,Orphanet:821] |
|
rs587784171
|
Pathogenic |
not provided|Sotos syndrome [MedGen:C3661900|MedGen:C0175695,OMIM:117550,Orphanet:821] |
|
rs587784176
|
LP/P |
Sotos syndrome (SOTOS) [MIM:117550] |
|
rs587784177
|
LP/P |
Sotos syndrome (SOTOS) [MIM:117550] |
|
rs587784178
|
Pathogenic |
not provided|Sotos syndrome [MedGen:C3661900|MedGen:C0175695,OMIM:117550,Orphanet:821] |
|
rs74428123
|
- |
- |
|
rs745423719
|
- |
- |
|
rs748303093
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of acetyl-CoA acetyltransferase [MedGen:C3661900|MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs748682601
|
Pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs748725086
|
- |
- |
|
rs750195919
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs7520453
|
- |
- |
|
rs753816946
|
- |
- |
|
rs757087726
|
Pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs758723288
|
Likely pathogenic |
Mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency|not provided|ECHS1-related condition [MONDO:MONDO:0014563,MedGen:C4225391,OMIM:616277,Orphanet:255241|MedGen:C3661900|] |
|
rs758809828
|
- |
- |
|
rs759251420
|
- |
- |
|
rs759307844
|
- |
- |
|
rs761295869
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs761937041
|
- |
- |
|
rs762922297
|
- |
- |
|
rs768158086
|
- |
- |
|
rs768448235
|
- |
- |
|
rs768495738
|
- |
- |
|
rs768681053
|
- |
- |
|
rs769204528
|
- |
- |
|
rs770911084
|
- |
- |
|
rs771432327
|
- |
- |
|
rs773503933
|
- |
- |
|
rs776312600
|
Pathogenic |
Weaver syndrome [MONDO:MONDO:0010193,MedGen:C0265210,OMIM:277590,Orphanet:3447] |
|
rs776400068
|
- |
- |
|
rs776421832
|
- |
- |
|
rs779135938
|
Likely pathogenic |
Deficiency of 3-hydroxyacyl-CoA dehydrogenase|Hyperinsulinemic hypoglycemia|Hyperinsulinemic hypoglycemia, familial, 4 [MONDO:MONDO:0017715,MedGen:C1291230,OMIM:231530,Orphanet:309127,Orphanet:71212|Human Phenotype Ontology:HP:0000825,MONDO:MONDO:0005803,MedGen:C1864903,OMIM:PS256450,Orphanet:443095|MONDO:MONDO:0012382,MedGen:C1864948,OMIM:609975,Orphanet:71212] |
|
rs779199558
|
- |
- |
|
rs781555217
|
Pathogenic |
Gamma-aminobutyric acid transaminase deficiency [MONDO:MONDO:0013166,MedGen:C0342708,OMIM:613163,Orphanet:2066] |
|
rs786205585
|
Pathogenic/Likely pathogenic |
Baraitser-Winter syndrome 1|Neurodevelopmental delay [MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995|Human Phenotype Ontology:HP:0012758,MedGen:C4022738] |
|
rs796052271
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs797045825
|
LP/P |
Sotos syndrome (SOTOS) [MIM:117550] |
|
rs864622558
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs886037776
|
Pathogenic |
Autism spectrum disorder [MONDO:MONDO:0005258,MeSH:D000067877,MedGen:C1510586,Orphanet:106]; Kleefstra syndrome 1 [MONDO:MONDO:0027407,MedGen:C0795833,OMIM:610253,Orphanet:261494] |
|
rs886037927
|
Likely pathogenic |
HSD10 mitochondrial disease [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295] |
|
rs886041219
|
Pathogenic/Likely pathogenic |
not provided|Sotos syndrome [MedGen:C3661900|MedGen:C0175695,OMIM:117550,Orphanet:821] |
hsa00330
|
Arginine and proline metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Argininemia (ARGIN) [MIM:207800] |
|
-
|
Pathogenic |
Arginase deficiency [MONDO:MONDO:0008814,MedGen:C0268548,OMIM:207800,Orphanet:90] |
|
-
|
Likely pathogenic |
ALDH18A1-related de Barsy syndrome [MONDO:MONDO:0009053,MedGen:C5234852,OMIM:219150,Orphanet:2962,Orphanet:35664] |
|
-
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
-
|
Likely pathogenic |
Syndromic X-linked intellectual disability Snyder type [MONDO:MONDO:0010664,MedGen:C0796160,OMIM:309583,Orphanet:3063] |
|
-
|
Pathogenic |
Arginine:glycine amidinotransferase deficiency [MONDO:MONDO:0012996,MedGen:C2675179,OMIM:612718,Orphanet:35704] |
|
-
|
LP/P |
Cerebral creatine deficiency syndrome 2 (CCDS2) [MIM:612736] |
|
-
|
Likely pathogenic |
Primary hyperoxaluria type 3 [MONDO:MONDO:0013327,MedGen:C3150878,OMIM:613616,Orphanet:416,Orphanet:93600] |
|
-
|
Pathogenic |
Cutis laxa, autosomal dominant 3 [MONDO:MONDO:0014706,MedGen:C4225268,OMIM:616603,Orphanet:90348]; Autosomal dominant spastic paraplegia type 9 [MONDO:MONDO:0015091,MedGen:C1832669]; de Barsy syndrome [MONDO:MONDO:0017569,MedGen:C0268354,Orphanet:2962] |
|
-
|
Likely pathogenic |
Cerebral creatine deficiency syndrome|Deficiency of guanidinoacetate methyltransferase [MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172|MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382] |
|
.
|
- |
- |
|
rs104893943
|
LP/P |
Argininemia (ARGIN) [MIM:207800] |
|
rs104893947
|
- |
- |
|
rs104893947
|
Pathogenic |
Arginase deficiency|not provided [MONDO:MONDO:0008814,MedGen:C0268548,OMIM:207800,Orphanet:90|MedGen:C3661900] |
|
rs104894694
|
LP/P |
Cerebral creatine deficiency syndrome 2 (CCDS2) [MIM:612736] |
|
rs104894694
|
Likely pathogenic |
Deficiency of guanidinoacetate methyltransferase|Cerebral creatine deficiency syndrome [MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382|MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172] |
|
rs113576450
|
- |
- |
|
rs1170817007
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1210644702
|
- |
- |
|
rs121434583
|
LP/P |
Cutis laxa, autosomal recessive, 3A (ARCL3A) [MIM:219150] |
|
rs121909272
|
LP/P |
Cerebral creatine deficiency syndrome 2 (CCDS2) [MIM:612736] |
|
rs121909272
|
Likely pathogenic |
Deficiency of guanidinoacetate methyltransferase|Cerebral creatine deficiency syndrome [MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382|MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172] |
|
rs121912707
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Seizure|Pyridoxine-dependent epilepsy caused by ALDH7A1 mutant [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|Human Phenotype Ontology:HP:0001250,Human Phenotype Ontology:HP:0001275,Human Phenotype Ontology:HP:0001303,Human Phenotype Ontology:HP:0002125,Human Phenotype Ontology:HP:0002182,Human Phenotype Ontology:HP:0002279,Human Phenotype Ontology:HP:0002306,Human Phenotype Ontology:HP:0002348,Human Phenotype Ontology:HP:0002391,Human Phenotype Ontology:HP:0002417,Human Phenotype Ontology:HP:0002430,Human Phenotype Ontology:HP:0002431,Human Phenotype Ontology:HP:0002432,Human Phenotype Ontology:HP:0002434,Human Phenotype Ontology:HP:0002437,Human Phenotype Ontology:HP:0002466,Human Phenotype Ontology:HP:0002479,Human Phenotype Ontology:HP:0002794,Human Phenotype Ontology:HP:0006997,Human Phenotype Ontology:HP:0010520,MedGen:C0036572|MONDO:MONDO:0020741,MedGen:CN293409] |
|
rs121912711
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs1239594775
|
- |
- |
|
rs1243598920
|
- |
- |
|
rs1311982393
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1325460408
|
Likely pathogenic |
Fanconi renotubular syndrome 1 [MONDO:MONDO:0024525,MedGen:C4551503,OMIM:134600] |
|
rs1345105436
|
- |
- |
|
rs1371496558
|
LP/P |
Cerebral creatine deficiency syndrome 2 (CCDS2) [MIM:612736] |
|
rs1373919219
|
- |
- |
|
rs138207257
|
LP/P |
Hyperoxaluria primary 3 (HP3) [MIM:613616] |
|
rs13894
|
LB/B |
- |
|
rs139751598
|
LP/P |
Cutis laxa, autosomal recessive, 2B (ARCL2B) [MIM:612940] |
|
rs139869668
|
- |
- |
|
rs140015394
|
- |
- |
|
rs140549609
|
Pathogenic/Likely pathogenic |
Arginase deficiency [MONDO:MONDO:0008814,MedGen:C0268548,OMIM:207800,Orphanet:90] |
|
rs140778208
|
LB/B |
- |
|
rs141292408
|
- |
- |
|
rs142814307
|
LP/P |
Cerebral creatine deficiency syndrome 3 (CCDS3) [MIM:612718] |
|
rs143550642
|
- |
- |
|
rs1441030187
|
LP/P |
Cerebral creatine deficiency syndrome 2 (CCDS2) [MIM:612736] |
|
rs1441030187
|
Pathogenic |
Cerebral creatine deficiency syndrome|Deficiency of guanidinoacetate methyltransferase [MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172|MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382] |
|
rs1447665588
|
LP/P |
Cerebral creatine deficiency syndrome 2 (CCDS2) [MIM:612736] |
|
rs1462559161
|
- |
- |
|
rs1467790706
|
- |
- |
|
rs150338273
|
LB/B |
- |
|
rs1569006974
|
- |
- |
|
rs1600158346
|
LP/P |
Cerebral creatine deficiency syndrome 2 (CCDS2) [MIM:612736] |
|
rs1600158346
|
Likely pathogenic |
Deficiency of guanidinoacetate methyltransferase|Cerebral creatine deficiency syndrome|not specified [MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382|MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172|MedGen:CN169374] |
|
rs1600158570
|
Pathogenic |
Cerebral creatine deficiency syndrome [MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172] |
|
rs1602210346
|
Pathogenic |
Syndromic X-linked intellectual disability Snyder type [MONDO:MONDO:0010664,MedGen:C0796160,OMIM:309583,Orphanet:3063] |
|
rs1671854827
|
Likely pathogenic |
Hypomyelinating leukodystrophy 10 [MONDO:MONDO:0014632,MedGen:C4225332,OMIM:616420] |
|
rs1750309299
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1750388096
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1773910245
|
Likely pathogenic |
Arginase deficiency [MONDO:MONDO:0008814,MedGen:C0268548,OMIM:207800,Orphanet:90] |
|
rs1889443535
|
LP/P |
Fanconi renotubular syndrome 1 (FRTS1) [MIM:134600] |
|
rs189919790
|
- |
- |
|
rs192178446
|
- |
- |
|
rs1924648986
|
Likely pathogenic |
Syndromic X-linked intellectual disability Snyder type [MONDO:MONDO:0010664,MedGen:C0796160,OMIM:309583,Orphanet:3063] |
|
rs1924650670
|
Pathogenic |
Syndromic X-linked intellectual disability Snyder type [MONDO:MONDO:0010664,MedGen:C0796160,OMIM:309583,Orphanet:3063] |
|
rs192820773
|
- |
- |
|
rs200444143
|
- |
- |
|
rs200444143
|
Pathogenic |
not provided|Cerebral creatine deficiency syndrome|Deficiency of guanidinoacetate methyltransferase [MedGen:C3661900|MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172|MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382] |
|
rs200529020
|
Likely pathogenic |
Primary hyperoxaluria type 3 [MONDO:MONDO:0013327,MedGen:C3150878,OMIM:613616,Orphanet:416,Orphanet:93600] |
|
rs200833152
|
LB/B |
- |
|
rs201023253
|
- |
- |
|
rs201835306
|
- |
- |
|
rs201948406
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Inborn genetic diseases [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs2114539596
|
Pathogenic/Likely pathogenic |
Arginase deficiency [MONDO:MONDO:0008814,MedGen:C0268548,OMIM:207800,Orphanet:90] |
|
rs2144637546
|
Pathogenic/Likely pathogenic |
Cerebral creatine deficiency syndrome|Deficiency of guanidinoacetate methyltransferase [MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172|MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382] |
|
rs267607076
|
LP/P |
Intellectual developmental disorder, X-linked, syndromic, Snyder-Robinson type (MRXSSR) [MIM:309583] |
|
rs370421531
|
Pathogenic |
not provided|Deficiency of guanidinoacetate methyltransferase|Cerebral creatine deficiency syndrome [MedGen:C3661900|MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382|MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172] |
|
rs372027428
|
LB/B |
- |
|
rs372660425
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs373239891
|
- |
- |
|
rs374724533
|
Pathogenic |
Cerebral creatine deficiency syndrome|Deficiency of guanidinoacetate methyltransferase|not provided [MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172|MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382|MedGen:C3661900] |
|
rs376921959
|
- |
- |
|
rs376982466
|
LP/P |
Cerebral creatine deficiency syndrome 3 (CCDS3) [MIM:612718] |
|
rs377345472
|
- |
- |
|
rs377578020
|
LP/P |
Cerebral creatine deficiency syndrome 3 (CCDS3) [MIM:612718] |
|
rs397514708
|
Pathogenic |
Arginine:glycine amidinotransferase deficiency|Fanconi renotubular syndrome 1 [MONDO:MONDO:0012996,MedGen:C2675179,OMIM:612718,Orphanet:35704|MONDO:MONDO:0024525,MedGen:C4551503,OMIM:134600]; Arginine:glycine amidinotransferase deficiency [MONDO:MONDO:0012996,MedGen:C2675179,OMIM:612718,Orphanet:35704] |
|
rs397515551
|
Pathogenic |
Syndromic X-linked intellectual disability Snyder type [MONDO:MONDO:0010664,MedGen:C0796160,OMIM:309583,Orphanet:3063] |
|
rs556400964
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs556829801
|
Pathogenic |
Cerebral creatine deficiency syndrome|Deficiency of guanidinoacetate methyltransferase [MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172|MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382] |
|
rs565428059
|
- |
- |
|
rs565509522
|
- |
- |
|
rs745614904
|
- |
- |
|
rs746419489
|
Pathogenic |
Primary hyperoxaluria type 3|not provided [MONDO:MONDO:0013327,MedGen:C3150878,OMIM:613616,Orphanet:416,Orphanet:93600|MedGen:C3661900] |
|
rs747608698
|
- |
- |
|
rs748925635
|
Pathogenic |
ALDH18A1-related de Barsy syndrome|not provided [MONDO:MONDO:0009053,MedGen:C5234852,OMIM:219150,Orphanet:2962,Orphanet:35664|MedGen:C3661900] |
|
rs749670133
|
- |
- |
|
rs750974539
|
Pathogenic/Likely pathogenic |
not provided|Primary hyperoxaluria type 3 [MedGen:C3661900|MONDO:MONDO:0013327,MedGen:C3150878,OMIM:613616,Orphanet:416,Orphanet:93600] |
|
rs750982871
|
- |
- |
|
rs751894166
|
- |
- |
|
rs752669339
|
LP/P |
Spastic paraplegia 9B, autosomal recessive (SPG9B) [MIM:616586] |
|
rs752669339
|
Likely pathogenic |
Autosomal recessive complex spastic paraplegia type 9B|Cutis laxa, autosomal dominant 3|Cutis laxa, autosomal dominant 3 [MONDO:MONDO:0014702,MedGen:C5568980,OMIM:616586,Orphanet:447760|MONDO:MONDO:0014706,MedGen:C4225268,OMIM:616603,Orphanet:90348|MONDO:MONDO:0014706,MedGen:C4225268,OMIM:616603,Orphanet:90348]; Autosomal dominant spastic paraplegia type 9 [MONDO:MONDO:0015091,MedGen:C1832669]; de Barsy syndrome [MONDO:MONDO:0017569,MedGen:C0268354,Orphanet:2962] |
|
rs753228876
|
- |
- |
|
rs754049561
|
- |
- |
|
rs754259099
|
Likely pathogenic |
Arginase deficiency [MONDO:MONDO:0008814,MedGen:C0268548,OMIM:207800,Orphanet:90] |
|
rs755295582
|
- |
- |
|
rs756168752
|
- |
- |
|
rs756489804
|
Pathogenic |
Primary hyperoxaluria type 3 [MONDO:MONDO:0013327,MedGen:C3150878,OMIM:613616,Orphanet:416,Orphanet:93600] |
|
rs757697327
|
- |
- |
|
rs758595075
|
Likely pathogenic |
Hypomyelinating leukodystrophy 10 [MONDO:MONDO:0014632,MedGen:C4225332,OMIM:616420] |
|
rs759180800
|
- |
- |
|
rs761254332
|
- |
- |
|
rs761288637
|
- |
- |
|
rs761295869
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs761363806
|
- |
- |
|
rs761372150
|
- |
- |
|
rs762601763
|
- |
- |
|
rs762922297
|
- |
- |
|
rs763493065
|
- |
- |
|
rs763764381
|
- |
- |
|
rs763887405
|
- |
- |
|
rs764145947
|
- |
- |
|
rs764224799
|
- |
- |
|
rs765070826
|
- |
- |
|
rs766264810
|
LP/P |
Spastic paraplegia 9A, autosomal dominant (SPG9A) [MIM:601162] |
|
rs766553422
|
- |
- |
|
rs770050262
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria type 3|not provided [MONDO:MONDO:0013327,MedGen:C3150878,OMIM:613616,Orphanet:416,Orphanet:93600|MedGen:C3661900] |
|
rs770129903
|
- |
- |
|
rs770442555
|
- |
- |
|
rs773503933
|
- |
- |
|
rs774047299
|
LP/P |
Cutis laxa, autosomal recessive, 3A (ARCL3A) [MIM:219150] |
|
rs774144200
|
LP/P |
Cerebral creatine deficiency syndrome 2 (CCDS2) [MIM:612736] |
|
rs774144200
|
Pathogenic |
Cerebral creatine deficiency syndrome|Deficiency of guanidinoacetate methyltransferase [MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172|MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382] |
|
rs774156740
|
- |
- |
|
rs774376343
|
- |
- |
|
rs775201668
|
Likely pathogenic |
Hereditary spastic paraplegia [MONDO:MONDO:0019064,MedGen:C0037773,OMIM:PS303350,Orphanet:685] |
|
rs776421832
|
- |
- |
|
rs777046879
|
Likely pathogenic |
Primary hyperoxaluria type 3|not provided [MONDO:MONDO:0013327,MedGen:C3150878,OMIM:613616,Orphanet:416,Orphanet:93600|MedGen:C3661900] |
|
rs780926147
|
- |
- |
|
rs781585158
|
- |
- |
|
rs796052088
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria type 3|not provided [MONDO:MONDO:0013327,MedGen:C3150878,OMIM:613616,Orphanet:416,Orphanet:93600|MedGen:C3661900] |
|
rs796052271
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs80338734
|
LP/P |
Cerebral creatine deficiency syndrome 2 (CCDS2) [MIM:612736] |
|
rs80338734
|
Pathogenic |
Deficiency of guanidinoacetate methyltransferase|Cerebral creatine deficiency syndrome|not provided|See cases|Inborn genetic diseases [MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382|MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172|MedGen:C3661900||MeSH:D030342,MedGen:C0950123] |
|
rs864622558
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs869320690
|
LP/P |
Spastic paraplegia 9B, autosomal recessive (SPG9B) [MIM:616586] |
|
rs886037933
|
Pathogenic |
Hypomyelinating leukodystrophy 10 [MONDO:MONDO:0014632,MedGen:C4225332,OMIM:616420] |
|
rs886054247
|
Pathogenic |
Deficiency of guanidinoacetate methyltransferase|Cerebral creatine deficiency syndrome [MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382|MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172] |
|
rs891042971
|
Likely pathogenic |
Cerebral creatine deficiency syndrome|Deficiency of guanidinoacetate methyltransferase [MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172|MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382] |
|
rs900794676
|
- |
- |
|
rs989031241
|
- |
- |
rn00332
|
Carbapenem biosynthesis
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
ALDH18A1-related de Barsy syndrome [MONDO:MONDO:0009053,MedGen:C5234852,OMIM:219150,Orphanet:2962,Orphanet:35664] |
|
-
|
Pathogenic |
Cutis laxa, autosomal dominant 3 [MONDO:MONDO:0014706,MedGen:C4225268,OMIM:616603,Orphanet:90348]; Autosomal dominant spastic paraplegia type 9 [MONDO:MONDO:0015091,MedGen:C1832669]; de Barsy syndrome [MONDO:MONDO:0017569,MedGen:C0268354,Orphanet:2962] |
|
.
|
- |
- |
|
rs121434583
|
LP/P |
Cutis laxa, autosomal recessive, 3A (ARCL3A) [MIM:219150] |
|
rs141292408
|
- |
- |
|
rs1462559161
|
- |
- |
|
rs373239891
|
- |
- |
|
rs745614904
|
- |
- |
|
rs748925635
|
Pathogenic |
ALDH18A1-related de Barsy syndrome|not provided [MONDO:MONDO:0009053,MedGen:C5234852,OMIM:219150,Orphanet:2962,Orphanet:35664|MedGen:C3661900] |
|
rs752669339
|
LP/P |
Spastic paraplegia 9B, autosomal recessive (SPG9B) [MIM:616586] |
|
rs752669339
|
Likely pathogenic |
Autosomal recessive complex spastic paraplegia type 9B|Cutis laxa, autosomal dominant 3|Cutis laxa, autosomal dominant 3 [MONDO:MONDO:0014702,MedGen:C5568980,OMIM:616586,Orphanet:447760|MONDO:MONDO:0014706,MedGen:C4225268,OMIM:616603,Orphanet:90348|MONDO:MONDO:0014706,MedGen:C4225268,OMIM:616603,Orphanet:90348]; Autosomal dominant spastic paraplegia type 9 [MONDO:MONDO:0015091,MedGen:C1832669]; de Barsy syndrome [MONDO:MONDO:0017569,MedGen:C0268354,Orphanet:2962] |
|
rs756168752
|
- |
- |
|
rs764145947
|
- |
- |
|
rs766264810
|
LP/P |
Spastic paraplegia 9A, autosomal dominant (SPG9A) [MIM:601162] |
|
rs770442555
|
- |
- |
|
rs774047299
|
LP/P |
Cutis laxa, autosomal recessive, 3A (ARCL3A) [MIM:219150] |
|
rs775201668
|
Likely pathogenic |
Hereditary spastic paraplegia [MONDO:MONDO:0019064,MedGen:C0037773,OMIM:PS303350,Orphanet:685] |
|
rs869320690
|
LP/P |
Spastic paraplegia 9B, autosomal recessive (SPG9B) [MIM:616586] |
|
rs989031241
|
- |
- |
rn00333
|
Prodigiosin biosynthesis
|
dbSNP |
Type |
Disease name |
|
.
|
- |
- |
hsa00340
|
Histidine metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
-
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
-
|
Pathogenic |
Spongy degeneration of central nervous system [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141] |
|
-
|
Pathogenic/Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
-
|
LP/P |
Microphthalmia, isolated, 8 (MCOP8) [MIM:615113] |
|
-
|
Likely pathogenic |
Isolated microphthalmia 8 [MONDO:MONDO:0014050,MedGen:C3554524,OMIM:615113,Orphanet:2542] |
|
.
|
- |
- |
|
rs1014551540
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs104894550
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs104894551
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs104894553
|
- |
- |
|
rs104894553
|
Pathogenic/Likely pathogenic |
Mild Canavan disease|Spongy degeneration of central nervous system|not provided|Inborn genetic diseases [MONDO:MONDO:0017831,MedGen:C4017127,Orphanet:314918|MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs1057516995
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs115638369
|
- |
- |
|
rs1170817007
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1192320601
|
Likely pathogenic |
Spongy degeneration of central nervous system [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141] |
|
rs121912707
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Seizure|Pyridoxine-dependent epilepsy caused by ALDH7A1 mutant [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|Human Phenotype Ontology:HP:0001250,Human Phenotype Ontology:HP:0001275,Human Phenotype Ontology:HP:0001303,Human Phenotype Ontology:HP:0002125,Human Phenotype Ontology:HP:0002182,Human Phenotype Ontology:HP:0002279,Human Phenotype Ontology:HP:0002306,Human Phenotype Ontology:HP:0002348,Human Phenotype Ontology:HP:0002391,Human Phenotype Ontology:HP:0002417,Human Phenotype Ontology:HP:0002430,Human Phenotype Ontology:HP:0002431,Human Phenotype Ontology:HP:0002432,Human Phenotype Ontology:HP:0002434,Human Phenotype Ontology:HP:0002437,Human Phenotype Ontology:HP:0002466,Human Phenotype Ontology:HP:0002479,Human Phenotype Ontology:HP:0002794,Human Phenotype Ontology:HP:0006997,Human Phenotype Ontology:HP:0010520,MedGen:C0036572|MONDO:MONDO:0020741,MedGen:CN293409] |
|
rs121912711
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs12948217
|
Pathogenic |
Spongy degeneration of central nervous system|not provided|Canavan Disease, Familial Form|Inborn genetic diseases [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141|MedGen:C3661900|MedGen:C0751663|MeSH:D030342,MedGen:C0950123] |
|
rs1311982393
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1337480983
|
- |
- |
|
rs137853207
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs137853208
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs137853209
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs137853210
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs1414684396
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs142034862
|
- |
- |
|
rs144106544
|
- |
- |
|
rs1446467099
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs1454273149
|
- |
- |
|
rs147763700
|
Likely pathogenic |
Spongy degeneration of central nervous system [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141] |
|
rs148563375
|
- |
- |
|
rs149445900
|
- |
- |
|
rs1555538148
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs1555538151
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs1585237892
|
Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs1597439028
|
Pathogenic |
Spongy degeneration of central nervous system|Inborn genetic diseases [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141|MeSH:D030342,MedGen:C0950123] |
|
rs1750309299
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1750388096
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs192178446
|
- |
- |
|
rs200600524
|
- |
- |
|
rs201887670
|
- |
- |
|
rs201907439
|
- |
- |
|
rs201948406
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Inborn genetic diseases [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs2150741844
|
Likely pathogenic |
Spongy degeneration of central nervous system [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141] |
|
rs2150746796
|
Pathogenic |
Spongy degeneration of central nervous system [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141] |
|
rs2153545926
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs28940279
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs367694828
|
- |
- |
|
rs367883268
|
- |
- |
|
rs372660425
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs374724805
|
Pathogenic |
Glutamate formiminotransferase deficiency [MONDO:MONDO:0009240,MedGen:C0268609,OMIM:229100,Orphanet:51208] |
|
rs375736464
|
Likely pathogenic |
Spongy degeneration of central nervous system [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141] |
|
rs375990689
|
- |
- |
|
rs376854191
|
LB/B |
- |
|
rs547918064
|
- |
- |
|
rs547918064
|
Likely pathogenic |
not provided|Isolated microphthalmia 8 [MedGen:C3661900|MONDO:MONDO:0014050,MedGen:C3554524,OMIM:615113,Orphanet:2542] |
|
rs561027881
|
- |
- |
|
rs567024602
|
- |
- |
|
rs61755740
|
- |
- |
|
rs758252808
|
LP/P |
Intellectual developmental disorder, autosomal recessive 51 (MRT51) [MIM:616739] |
|
rs761288637
|
- |
- |
|
rs761295869
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs762601763
|
- |
- |
|
rs763959573
|
- |
- |
|
rs770706390
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs771317809
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of aromatic-L-amino-acid decarboxylase [MedGen:C3661900|MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs773049803
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs773503933
|
- |
- |
|
rs774323189
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs774376343
|
- |
- |
|
rs776421832
|
- |
- |
|
rs776777887
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs781387185
|
- |
- |
|
rs781507152
|
- |
- |
|
rs796052271
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs864622558
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs900794676
|
- |
- |
|
rs935725316
|
Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs937670540
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs971183744
|
- |
- |
hsa00350
|
Tyrosine metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
Pathogenic |
Orthostatic hypotension 1 [MONDO:MONDO:0009123,MedGen:C4746777,OMIM:223360,Orphanet:230] |
|
-
|
LP/P |
Succinic semialdehyde dehydrogenase deficiency (SSADHD) [MIM:271980] |
|
-
|
Pathogenic |
Succinate-semialdehyde dehydrogenase deficiency [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22] |
|
-
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
-
|
Likely pathogenic |
Tyrosinemia type I [MONDO:MONDO:0010161,MedGen:C0268490,OMIM:276700,Orphanet:882] |
|
-
|
LP/P |
Tyrosinemia 3 (TYRSN3) [MIM:276710] |
|
-
|
LP/P |
Segawa syndrome autosomal recessive (ARSEGS) [MIM:605407] |
|
-
|
Likely pathogenic |
Autosomal recessive DOPA responsive dystonia [MONDO:MONDO:0011551,MedGen:C2673535,OMIM:605407,Orphanet:101150] |
|
-
|
Pathogenic/Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
-
|
LP/P |
Microphthalmia, isolated, 8 (MCOP8) [MIM:615113] |
|
-
|
Likely pathogenic |
Isolated microphthalmia 8 [MONDO:MONDO:0014050,MedGen:C3554524,OMIM:615113,Orphanet:2542] |
|
.
|
- |
- |
|
rs1041969
|
LB/B |
- |
|
rs1057520384
|
LP/P |
Segawa syndrome autosomal recessive (ARSEGS) [MIM:605407] |
|
rs1126673
|
- |
- |
|
rs115638369
|
- |
- |
|
rs118203916
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
rs118203982
|
Pathogenic |
Succinate-semialdehyde dehydrogenase deficiency|not provided [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22|MedGen:C3661900] |
|
rs1193030161
|
Pathogenic |
Tyrosinemia type I [MONDO:MONDO:0010161,MedGen:C0268490,OMIM:276700,Orphanet:882] |
|
rs121917765
|
LP/P |
Segawa syndrome autosomal recessive (ARSEGS) [MIM:605407] |
|
rs121965074
|
Likely pathogenic |
Tyrosinemia type I [MONDO:MONDO:0010161,MedGen:C0268490,OMIM:276700,Orphanet:882] |
|
rs1229984
|
LB/B |
- |
|
rs1232923691
|
- |
- |
|
rs1260079066
|
- |
- |
|
rs1260079066
|
Pathogenic |
Autosomal recessive DOPA responsive dystonia [MONDO:MONDO:0011551,MedGen:C2673535,OMIM:605407,Orphanet:101150] |
|
rs1276998235
|
Pathogenic |
Hawkinsinuria [Human Phenotype Ontology:HP:0034457,MONDO:MONDO:0007700,MedGen:C2931042,OMIM:140350,Orphanet:2118] |
|
rs1326526453
|
- |
- |
|
rs1326526453
|
LP/P |
Succinic semialdehyde dehydrogenase deficiency (SSADHD) [MIM:271980] |
|
rs13306279
|
- |
- |
|
rs13306303
|
- |
- |
|
rs137852865
|
LP/P |
Tyrosinemia 3 (TYRSN3) [MIM:276710] |
|
rs137853207
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs137853209
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs137853210
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs140180293
|
- |
- |
|
rs1419468984
|
- |
- |
|
rs1420414848
|
Pathogenic/Likely pathogenic |
Tyrosinemia type I [MONDO:MONDO:0010161,MedGen:C0268490,OMIM:276700,Orphanet:882] |
|
rs1428589694
|
LP/P |
Segawa syndrome autosomal recessive (ARSEGS) [MIM:605407] |
|
rs143826965
|
- |
- |
|
rs144040856
|
- |
- |
|
rs145087265
|
LP/P |
Succinic semialdehyde dehydrogenase deficiency (SSADHD) [MIM:271980] |
|
rs145567714
|
- |
- |
|
rs1471862905
|
- |
- |
|
rs1490005005
|
- |
- |
|
rs149180825
|
- |
- |
|
rs149408684
|
- |
- |
|
rs150771380
|
- |
- |
|
rs1554411234
|
Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs1554922441
|
Likely pathogenic |
Autosomal recessive DOPA responsive dystonia [MONDO:MONDO:0011551,MedGen:C2673535,OMIM:605407,Orphanet:101150] |
|
rs1585237892
|
Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs1595894742
|
Likely pathogenic |
Tyrosinemia type I [MONDO:MONDO:0010161,MedGen:C0268490,OMIM:276700,Orphanet:882] |
|
rs1764675543
|
Pathogenic |
Succinate-semialdehyde dehydrogenase deficiency [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22] |
|
rs181309650
|
- |
- |
|
rs199710929
|
- |
- |
|
rs201082751
|
- |
- |
|
rs201128036
|
- |
- |
|
rs201225516
|
- |
- |
|
rs201859570
|
- |
- |
|
rs201934016
|
- |
- |
|
rs201951824
|
Pathogenic/Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase|See cases|not provided [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708||MedGen:C3661900] |
|
rs2044180572
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
rs2066702
|
LB/B |
- |
|
rs2127385894
|
Pathogenic |
Succinate-semialdehyde dehydrogenase deficiency [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22] |
|
rs267606760
|
LP/P |
Orthostatic hypotension 1 (ORTHYP1) [MIM:223360] |
|
rs28730628
|
LB/B |
- |
|
rs35097308
|
LB/B |
- |
|
rs35385902
|
LB/B |
- |
|
rs367674632
|
Pathogenic/Likely pathogenic |
Hawkinsinuria [Human Phenotype Ontology:HP:0034457,MONDO:MONDO:0007700,MedGen:C2931042,OMIM:140350,Orphanet:2118]; Tyrosinemia type III|Tyrosinemia type III|not provided [MONDO:MONDO:0010162,MedGen:C0268623,OMIM:276710,Orphanet:69723|MONDO:MONDO:0010162,MedGen:C0268623,OMIM:276710,Orphanet:69723|MedGen:C3661900] |
|
rs367861880
|
- |
- |
|
rs370785052
|
- |
- |
|
rs373611092
|
- |
- |
|
rs373846010
|
- |
- |
|
rs374232934
|
- |
- |
|
rs375628463
|
LP/P |
Succinic semialdehyde dehydrogenase deficiency (SSADHD) [MIM:271980] |
|
rs375806157
|
- |
- |
|
rs377699817
|
- |
- |
|
rs408038
|
LB/B |
- |
|
rs4986871
|
LB/B |
- |
|
rs530957915
|
- |
- |
|
rs5319
|
LB/B |
- |
|
rs547918064
|
- |
- |
|
rs547918064
|
Likely pathogenic |
not provided|Isolated microphthalmia 8 [MedGen:C3661900|MONDO:MONDO:0014050,MedGen:C3554524,OMIM:615113,Orphanet:2542] |
|
rs556631070
|
- |
- |
|
rs56251804
|
- |
- |
|
rs5639
|
LB/B |
- |
|
rs5641
|
LB/B |
- |
|
rs575273220
|
- |
- |
|
rs62621664
|
LB/B |
- |
|
rs62621664
|
Likely pathogenic |
Succinate-semialdehyde dehydrogenase deficiency [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22] |
|
rs629682
|
- |
- |
|
rs72552283
|
LP/P |
Succinic semialdehyde dehydrogenase deficiency (SSADHD) [MIM:271980] |
|
rs74451421
|
- |
- |
|
rs746854963
|
- |
- |
|
rs747209153
|
- |
- |
|
rs748170674
|
Pathogenic |
Succinate-semialdehyde dehydrogenase deficiency [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22] |
|
rs750389182
|
- |
- |
|
rs751888532
|
Pathogenic/Likely pathogenic |
Succinate-semialdehyde dehydrogenase deficiency|not provided|ALDH5A1-related condition [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22|MedGen:C3661900|] |
|
rs752258545
|
- |
- |
|
rs753034981
|
- |
- |
|
rs757187379
|
- |
- |
|
rs757528079
|
- |
- |
|
rs759139777
|
- |
- |
|
rs75967634
|
- |
- |
|
rs761042153
|
- |
- |
|
rs761817519
|
Pathogenic/Likely pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
rs763022610
|
- |
- |
|
rs763392896
|
- |
- |
|
rs765561257
|
LP/P |
Succinic semialdehyde dehydrogenase deficiency (SSADHD) [MIM:271980] |
|
rs768158086
|
- |
- |
|
rs768697532
|
- |
- |
|
rs769550316
|
- |
- |
|
rs769550316
|
Pathogenic |
Tyrosinemia type I|not provided [MONDO:MONDO:0010161,MedGen:C0268490,OMIM:276700,Orphanet:882|MedGen:C3661900] |
|
rs769763635
|
- |
- |
|
rs771317809
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of aromatic-L-amino-acid decarboxylase [MedGen:C3661900|MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs771747983
|
- |
- |
|
rs772361710
|
- |
- |
|
rs774496720
|
- |
- |
|
rs781507152
|
- |
- |
|
rs78445536
|
- |
- |
|
rs80338897
|
Pathogenic |
Tyrosinemia type I [MONDO:MONDO:0010161,MedGen:C0268490,OMIM:276700,Orphanet:882] |
|
rs886043944
|
- |
- |
|
rs906284769
|
Pathogenic/Likely pathogenic |
not specified|Succinate-semialdehyde dehydrogenase deficiency|not provided [MedGen:CN169374|MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22|MedGen:C3661900] |
|
rs935725316
|
Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs971183744
|
- |
- |
|
rs984792300
|
- |
- |
hsa00360
|
Phenylalanine metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
-
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
-
|
LP/P |
Tyrosinemia 3 (TYRSN3) [MIM:276710] |
|
-
|
Pathogenic/Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
-
|
LP/P |
Microphthalmia, isolated, 8 (MCOP8) [MIM:615113] |
|
-
|
Likely pathogenic |
Isolated microphthalmia 8 [MONDO:MONDO:0014050,MedGen:C3554524,OMIM:615113,Orphanet:2542] |
|
-
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
.
|
- |
- |
|
rs1041969
|
LB/B |
- |
|
rs104886492
|
US |
HSD10 mitochondrial disease (HSD10MD) [MIM:300438] |
|
rs1126673
|
- |
- |
|
rs115638369
|
- |
- |
|
rs118203916
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
rs118203925
|
LP/P |
Non-phenylketonuria hyperphenylalaninemia (Non-PKU HPA) [MIM:261600] |
|
rs1202368985
|
- |
- |
|
rs1229984
|
LB/B |
- |
|
rs1231529155
|
Pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1276998235
|
Pathogenic |
Hawkinsinuria [Human Phenotype Ontology:HP:0034457,MONDO:MONDO:0007700,MedGen:C2931042,OMIM:140350,Orphanet:2118] |
|
rs1296824835
|
- |
- |
|
rs1355039694
|
- |
- |
|
rs137852865
|
LP/P |
Tyrosinemia 3 (TYRSN3) [MIM:276710] |
|
rs137853096
|
LP/P |
D-bifunctional protein deficiency (DBPD) [MIM:261515] |
|
rs137853101
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs137853102
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs137853207
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs137853209
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs137853210
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs1392361503
|
Pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs139269539
|
- |
- |
|
rs139273956
|
- |
- |
|
rs1471862905
|
- |
- |
|
rs1486763160
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs149180825
|
- |
- |
|
rs149408684
|
- |
- |
|
rs149585110
|
- |
- |
|
rs150939574
|
- |
- |
|
rs1555203737
|
Pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1555209575
|
Pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1561442127
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs1565846805
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1565846863
|
Pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1565846899
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1565866547
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1585237892
|
Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs1592988883
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs181309650
|
- |
- |
|
rs1874693635
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1877437661
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs199475567
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs199475579
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs199475580
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs199475582
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs199475598
|
LP/P |
Hyperphenylalaninemia (HPA) [MIM:261600] |
|
rs199475610
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs199475630
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs199475634
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs199475639
|
Pathogenic |
not provided|Phenylketonuria [MedGen:CN517202|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs199475643
|
LP/P |
Hyperphenylalaninemia (HPA) [MIM:261600] |
|
rs199475651
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs199475654
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs199475660
|
Pathogenic/Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs199475678
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs201934016
|
- |
- |
|
rs2044180572
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
rs2066702
|
LB/B |
- |
|
rs2136702181
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs281865438
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs281865454
|
Pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs284797
|
- |
- |
|
rs28730628
|
LB/B |
- |
|
rs35229514
|
- |
- |
|
rs35385902
|
LB/B |
- |
|
rs35670089
|
LB/B |
- |
|
rs35702888
|
LB/B |
- |
|
rs367674632
|
Pathogenic/Likely pathogenic |
Hawkinsinuria [Human Phenotype Ontology:HP:0034457,MONDO:MONDO:0007700,MedGen:C2931042,OMIM:140350,Orphanet:2118]; Tyrosinemia type III|Tyrosinemia type III|not provided [MONDO:MONDO:0010162,MedGen:C0268623,OMIM:276710,Orphanet:69723|MONDO:MONDO:0010162,MedGen:C0268623,OMIM:276710,Orphanet:69723|MedGen:C3661900] |
|
rs367861880
|
- |
- |
|
rs371834662
|
- |
- |
|
rs377699817
|
- |
- |
|
rs5030841
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs5030842
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs5030846
|
Pathogenic |
Phenylketonuria|not provided|PAH-related condition|Inborn genetic diseases [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716|MedGen:C3661900||MeSH:D030342,MedGen:C0950123] |
|
rs5030847
|
- |
- |
|
rs5030847
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs5030851
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs539728659
|
- |
- |
|
rs547918064
|
- |
- |
|
rs547918064
|
Likely pathogenic |
not provided|Isolated microphthalmia 8 [MedGen:C3661900|MONDO:MONDO:0014050,MedGen:C3554524,OMIM:615113,Orphanet:2542] |
|
rs550705310
|
- |
- |
|
rs56251804
|
- |
- |
|
rs577954688
|
- |
- |
|
rs62507326
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62507332
|
Pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62507335
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62507338
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:CN517202|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62507340
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62507347
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62508573
|
Pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62508578
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62508580
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62508588
|
- |
- |
|
rs62508588
|
LP/P |
Non-phenylketonuria hyperphenylalaninemia (Non-PKU HPA) [MIM:261600] |
|
rs62508694
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62508698
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62508698
|
Pathogenic |
Phenylketonuria|not provided|Inborn genetic diseases|Polymicrogyria, perisylvian, with cerebellar hypoplasia and arthrogryposis [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716|MedGen:C3661900|MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0014679,MedGen:C4225295,OMIM:616531] |
|
rs62508731
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:CN517202|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62508734
|
Pathogenic |
Phenylketonuria|not provided [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716|MedGen:C3661900] |
|
rs62508739
|
Pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62508752
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62509017
|
Pathogenic/Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62514902
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62514957
|
- |
- |
|
rs62514957
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62514958
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62514959
|
Pathogenic |
Phenylketonuria|not provided [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716|MedGen:C3661900] |
|
rs62516062
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62517181
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62635346
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62642916
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62642918
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62642928
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62642930
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62642931
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62642934
|
LP/P |
Non-phenylketonuria hyperphenylalaninemia (Non-PKU HPA) [MIM:261600] |
|
rs62642942
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62642944
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62644503
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs74428123
|
- |
- |
|
rs74451421
|
- |
- |
|
rs74503222
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs74603784
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs746203167
|
- |
- |
|
rs747209153
|
- |
- |
|
rs748337823
|
Pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs748439275
|
Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs750389182
|
- |
- |
|
rs751203209
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs75193786
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs756168037
|
- |
- |
|
rs75967634
|
- |
- |
|
rs761042153
|
- |
- |
|
rs761434457
|
- |
- |
|
rs761742678
|
- |
- |
|
rs76212747
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs762678930
|
- |
- |
|
rs762949770
|
Pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs763363576
|
- |
- |
|
rs763392896
|
- |
- |
|
rs76394784
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs767453024
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs767560456
|
- |
- |
|
rs768158086
|
- |
- |
|
rs768697532
|
- |
- |
|
rs769763635
|
- |
- |
|
rs771317809
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of aromatic-L-amino-acid decarboxylase [MedGen:C3661900|MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs778013714
|
Likely pathogenic |
not provided|Myeloperoxidase deficiency [MedGen:C3661900|MONDO:MONDO:0009694,MedGen:C0398595,OMIM:254600,Orphanet:2587]; Alzheimer disease type 1|Myeloperoxidase deficiency [MONDO:MONDO:0007088,MedGen:C1863052,OMIM:104300|MONDO:MONDO:0009694,MedGen:C0398595,OMIM:254600,Orphanet:2587] |
|
rs779135938
|
Likely pathogenic |
Deficiency of 3-hydroxyacyl-CoA dehydrogenase|Hyperinsulinemic hypoglycemia|Hyperinsulinemic hypoglycemia, familial, 4 [MONDO:MONDO:0017715,MedGen:C1291230,OMIM:231530,Orphanet:309127,Orphanet:71212|Human Phenotype Ontology:HP:0000825,MONDO:MONDO:0005803,MedGen:C1864903,OMIM:PS256450,Orphanet:443095|MONDO:MONDO:0012382,MedGen:C1864948,OMIM:609975,Orphanet:71212] |
|
rs781507152
|
- |
- |
|
rs796052017
|
LP/P |
Hyperphenylalaninemia (HPA) [MIM:261600] |
|
rs796064502
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs8178401
|
- |
- |
|
rs886037927
|
Likely pathogenic |
HSD10 mitochondrial disease [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295] |
|
rs931702374
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs935725316
|
Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs971183744
|
- |
- |
|
rs984792300
|
- |
- |
rn00362
|
Benzoate degradation
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
-
|
Likely pathogenic |
Deficiency of 3-hydroxyacyl-CoA dehydrogenase [MONDO:MONDO:0017715,MedGen:C1291230,OMIM:231530,Orphanet:309127,Orphanet:71212] |
|
-
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
.
|
- |
- |
|
rs1041969
|
LB/B |
- |
|
rs104886492
|
US |
HSD10 mitochondrial disease (HSD10MD) [MIM:300438] |
|
rs1126673
|
- |
- |
|
rs120074141
|
LP/P |
3-ketothiolase deficiency (3KTD) [MIM:203750] |
|
rs1202368985
|
- |
- |
|
rs1229984
|
LB/B |
- |
|
rs1296824835
|
- |
- |
|
rs137853096
|
LP/P |
D-bifunctional protein deficiency (DBPD) [MIM:261515] |
|
rs137853101
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs137853102
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs1392361503
|
Pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs139273956
|
- |
- |
|
rs1437567292
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1471862905
|
- |
- |
|
rs149408684
|
- |
- |
|
rs150939574
|
- |
- |
|
rs1561442127
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs1591374629
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1591374632
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs201934016
|
- |
- |
|
rs202015012
|
- |
- |
|
rs2066702
|
LB/B |
- |
|
rs2134768688
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs2134768866
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs284797
|
- |
- |
|
rs28730628
|
LB/B |
- |
|
rs35229514
|
- |
- |
|
rs35385902
|
LB/B |
- |
|
rs367861880
|
- |
- |
|
rs371834662
|
- |
- |
|
rs377699817
|
- |
- |
|
rs539728659
|
- |
- |
|
rs541517496
|
Pathogenic/Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs550705310
|
- |
- |
|
rs56251804
|
- |
- |
|
rs577954688
|
- |
- |
|
rs74428123
|
- |
- |
|
rs74451421
|
- |
- |
|
rs747209153
|
- |
- |
|
rs748303093
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of acetyl-CoA acetyltransferase [MedGen:C3661900|MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs750195919
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs750389182
|
- |
- |
|
rs753816946
|
- |
- |
|
rs756168037
|
- |
- |
|
rs75967634
|
- |
- |
|
rs761042153
|
- |
- |
|
rs763392896
|
- |
- |
|
rs768448235
|
- |
- |
|
rs768697532
|
- |
- |
|
rs769763635
|
- |
- |
|
rs779135938
|
Likely pathogenic |
Deficiency of 3-hydroxyacyl-CoA dehydrogenase|Hyperinsulinemic hypoglycemia|Hyperinsulinemic hypoglycemia, familial, 4 [MONDO:MONDO:0017715,MedGen:C1291230,OMIM:231530,Orphanet:309127,Orphanet:71212|Human Phenotype Ontology:HP:0000825,MONDO:MONDO:0005803,MedGen:C1864903,OMIM:PS256450,Orphanet:443095|MONDO:MONDO:0012382,MedGen:C1864948,OMIM:609975,Orphanet:71212] |
|
rs886037927
|
Likely pathogenic |
HSD10 mitochondrial disease [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295] |
rn00363
|
Bisphenol degradation
|
dbSNP |
Type |
Disease name |
|
.
|
- |
- |
|
rs199693212
|
- |
- |
|
rs662
|
- |
- |
|
rs745352941
|
- |
- |
hsa00380
|
Tryptophan metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
-
|
US |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
-
|
Likely pathogenic |
Deficiency of 3-hydroxyacyl-CoA dehydrogenase [MONDO:MONDO:0017715,MedGen:C1291230,OMIM:231530,Orphanet:309127,Orphanet:71212] |
|
-
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
-
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
-
|
Pathogenic/Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
-
|
Likely pathogenic |
Anterior segment dysgenesis 6 [MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
-
|
Likely pathogenic |
Anterior segment dysgenesis [Human Phenotype Ontology:HP:0007696,Human Phenotype Ontology:HP:0007699,Human Phenotype Ontology:HP:0007700,Human Phenotype Ontology:HP:0008040,MONDO:MONDO:0019503,MedGen:C1862839,OMIM:PS107250,Orphanet:88632] |
|
-
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
.
|
- |
- |
|
rs1041988
|
LB/B |
- |
|
rs104886492
|
US |
HSD10 mitochondrial disease (HSD10MD) [MIM:300438] |
|
rs104893628
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs104894979
|
Likely pathogenic |
Glaucoma 3A|Anterior segment dysgenesis 6 [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
rs1170817007
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs120074141
|
LP/P |
3-ketothiolase deficiency (3KTD) [MIM:203750] |
|
rs120074176
|
- |
- |
|
rs1202368985
|
- |
- |
|
rs121912707
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Seizure|Pyridoxine-dependent epilepsy caused by ALDH7A1 mutant [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|Human Phenotype Ontology:HP:0001250,Human Phenotype Ontology:HP:0001275,Human Phenotype Ontology:HP:0001303,Human Phenotype Ontology:HP:0002125,Human Phenotype Ontology:HP:0002182,Human Phenotype Ontology:HP:0002279,Human Phenotype Ontology:HP:0002306,Human Phenotype Ontology:HP:0002348,Human Phenotype Ontology:HP:0002391,Human Phenotype Ontology:HP:0002417,Human Phenotype Ontology:HP:0002430,Human Phenotype Ontology:HP:0002431,Human Phenotype Ontology:HP:0002432,Human Phenotype Ontology:HP:0002434,Human Phenotype Ontology:HP:0002437,Human Phenotype Ontology:HP:0002466,Human Phenotype Ontology:HP:0002479,Human Phenotype Ontology:HP:0002794,Human Phenotype Ontology:HP:0006997,Human Phenotype Ontology:HP:0010520,MedGen:C0036572|MONDO:MONDO:0020741,MedGen:CN293409] |
|
rs121912711
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs121918822
|
US |
- |
|
rs121918823
|
LB/B |
- |
|
rs121918824
|
LB/B |
- |
|
rs121964988
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs121964991
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs121964993
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs1250753551
|
- |
- |
|
rs1254633416
|
- |
- |
|
rs12721627
|
LB/B |
- |
|
rs12721629
|
LB/B |
- |
|
rs1309748501
|
- |
- |
|
rs1311982393
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1318565860
|
- |
- |
|
rs1350170100
|
- |
- |
|
rs137853096
|
LP/P |
D-bifunctional protein deficiency (DBPD) [MIM:261515] |
|
rs137853101
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs137853102
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs137853207
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs137853209
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs137853210
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs1392361503
|
Pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs140180293
|
- |
- |
|
rs140239671
|
- |
- |
|
rs1419468984
|
- |
- |
|
rs1437567292
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs145669559
|
- |
- |
|
rs145712373
|
- |
- |
|
rs148036160
|
LB/B |
- |
|
rs148542782
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs149222772
|
- |
- |
|
rs150771380
|
- |
- |
|
rs151132024
|
- |
- |
|
rs1553957997
|
LP/P |
Hypertryptophanemia (HYPTRP) [MIM:600627] |
|
rs1554411234
|
Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs1561442127
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs1585237892
|
Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs1591374629
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1591374632
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs17110563
|
LB/B |
- |
|
rs1750309299
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1750388096
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1815413655
|
LP/P |
Vitamin D-dependent rickets 3 (VDDR3) [MIM:619073] |
|
rs199558694
|
- |
- |
|
rs200166209
|
- |
- |
|
rs200600593
|
- |
- |
|
rs200861229
|
- |
- |
|
rs201286895
|
- |
- |
|
rs201316181
|
LB/B |
- |
|
rs201859570
|
- |
- |
|
rs201865375
|
- |
- |
|
rs201865375
|
Pathogenic/Likely pathogenic |
Mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency|not provided [MONDO:MONDO:0014563,MedGen:C4225391,OMIM:616277,Orphanet:255241|MedGen:C3661900] |
|
rs201948406
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Inborn genetic diseases [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs202015012
|
- |
- |
|
rs2032247686
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs2032282970
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs2125316074
|
Pathogenic/Likely pathogenic |
Glaucoma 3A|Primary congenital glaucoma [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|Human Phenotype Ontology:HP:0008007,MONDO:MONDO:0000365,MedGen:C1533041] |
|
rs2134768688
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs2134768866
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs2153545926
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs2302339
|
LB/B |
- |
|
rs28383468
|
- |
- |
|
rs28936701
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs28936701
|
Pathogenic |
Glaucoma 3A|not provided|Congenital glaucoma|Primary congenital glaucoma|Anterior segment dysgenesis 6 [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MedGen:C3661900|MONDO:MONDO:0020366,MedGen:C0020302|Human Phenotype Ontology:HP:0008007,MONDO:MONDO:0000365,MedGen:C1533041|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
rs367902441
|
- |
- |
|
rs371582393
|
Likely pathogenic |
Mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency [MONDO:MONDO:0014563,MedGen:C4225391,OMIM:616277,Orphanet:255241] |
|
rs371807385
|
- |
- |
|
rs371834662
|
- |
- |
|
rs372660425
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs373088979
|
- |
- |
|
rs374926260
|
- |
- |
|
rs375032130
|
Pathogenic/Likely pathogenic |
not provided|Mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency|See cases [MedGen:C3661900|MONDO:MONDO:0014563,MedGen:C4225391,OMIM:616277,Orphanet:255241|] |
|
rs375266808
|
Pathogenic |
Mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency|not provided [MONDO:MONDO:0014563,MedGen:C4225391,OMIM:616277,Orphanet:255241|MedGen:C3661900] |
|
rs4986910
|
LB/B |
- |
|
rs4987161
|
LB/B |
- |
|
rs541517496
|
Pathogenic/Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs550705310
|
- |
- |
|
rs55785340
|
LB/B |
- |
|
rs557905773
|
- |
- |
|
rs55901263
|
LB/B |
- |
|
rs55951658
|
LB/B |
- |
|
rs55989760
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs55989760
|
Pathogenic/Likely pathogenic |
Glaucoma 3A|Primary congenital glaucoma|not provided|Glaucoma of childhood|Anterior segment dysgenesis 6|Congenital glaucoma|Glaucoma 3A [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|Human Phenotype Ontology:HP:0008007,MONDO:MONDO:0000365,MedGen:C1533041|MedGen:C3661900|Human Phenotype Ontology:HP:0001087,MONDO:MONDO:0020367,MedGen:C2981140,Orphanet:98977|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315|MONDO:MONDO:0020366,MedGen:C0020302|MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977]; Glaucoma 3, primary infantile, B [MONDO:MONDO:0010968,MedGen:C1832977,OMIM:600975,Orphanet:98976]; Anterior segment dysgenesis 6 [MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
rs56010818
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs56010818
|
Pathogenic/Likely pathogenic |
not provided|Anterior segment dysgenesis 6|Glaucoma 3A|Congenital glaucoma [MedGen:C3661900|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315|MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MONDO:MONDO:0020366,MedGen:C0020302] |
|
rs56324128
|
LB/B |
- |
|
rs56800285
|
LB/B |
- |
|
rs577954688
|
- |
- |
|
rs66583685
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs67784355
|
LB/B |
- |
|
rs6943147
|
- |
- |
|
rs6970210
|
LB/B |
- |
|
rs72549378
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs72552799
|
LB/B |
- |
|
rs74428123
|
- |
- |
|
rs745423719
|
- |
- |
|
rs745677091
|
- |
- |
|
rs746356539
|
- |
- |
|
rs748303093
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of acetyl-CoA acetyltransferase [MedGen:C3661900|MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs748439275
|
Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs748682601
|
Pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs750195919
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs752456881
|
LB/B |
- |
|
rs753521841
|
- |
- |
|
rs753816946
|
- |
- |
|
rs756271054
|
- |
- |
|
rs756911079
|
- |
- |
|
rs757087726
|
Pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs758723288
|
Likely pathogenic |
Mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency|not provided|ECHS1-related condition [MONDO:MONDO:0014563,MedGen:C4225391,OMIM:616277,Orphanet:255241|MedGen:C3661900|] |
|
rs759139777
|
- |
- |
|
rs759480873
|
- |
- |
|
rs761295869
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs762184984
|
- |
- |
|
rs762601763
|
- |
- |
|
rs766480924
|
- |
- |
|
rs768448235
|
- |
- |
|
rs769204528
|
- |
- |
|
rs770302701
|
- |
- |
|
rs770790692
|
- |
- |
|
rs771317809
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of aromatic-L-amino-acid decarboxylase [MedGen:C3661900|MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs772613221
|
- |
- |
|
rs773503933
|
- |
- |
|
rs774168721
|
- |
- |
|
rs776400068
|
- |
- |
|
rs776421832
|
- |
- |
|
rs776435144
|
- |
- |
|
rs776567184
|
- |
- |
|
rs777678299
|
- |
- |
|
rs777913012
|
- |
- |
|
rs779135938
|
Likely pathogenic |
Deficiency of 3-hydroxyacyl-CoA dehydrogenase|Hyperinsulinemic hypoglycemia|Hyperinsulinemic hypoglycemia, familial, 4 [MONDO:MONDO:0017715,MedGen:C1291230,OMIM:231530,Orphanet:309127,Orphanet:71212|Human Phenotype Ontology:HP:0000825,MONDO:MONDO:0005803,MedGen:C1864903,OMIM:PS256450,Orphanet:443095|MONDO:MONDO:0012382,MedGen:C1864948,OMIM:609975,Orphanet:71212] |
|
rs796052271
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs864622558
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs886037927
|
Likely pathogenic |
HSD10 mitochondrial disease [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295] |
|
rs9282670
|
LB/B |
- |
|
rs935725316
|
Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs944452644
|
Likely pathogenic |
Glaucoma 3A|Anterior segment dysgenesis 6 [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
rs953539388
|
- |
- |
|
rs971183744
|
- |
- |
hsa00400
|
Phenylalanine, tyrosine and tryptophan biosynthesis
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
-
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
.
|
- |
- |
|
rs118203916
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
rs118203925
|
LP/P |
Non-phenylketonuria hyperphenylalaninemia (Non-PKU HPA) [MIM:261600] |
|
rs1231529155
|
Pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1355039694
|
- |
- |
|
rs1486763160
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs1555203737
|
Pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1555209575
|
Pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1565846805
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1565846863
|
Pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1565846899
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1565866547
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1592988883
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs181309650
|
- |
- |
|
rs1874693635
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1877437661
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs199475567
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs199475579
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs199475580
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs199475582
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs199475598
|
LP/P |
Hyperphenylalaninemia (HPA) [MIM:261600] |
|
rs199475610
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs199475630
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs199475634
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs199475639
|
Pathogenic |
not provided|Phenylketonuria [MedGen:CN517202|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs199475643
|
LP/P |
Hyperphenylalaninemia (HPA) [MIM:261600] |
|
rs199475651
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs199475654
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs199475660
|
Pathogenic/Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs199475678
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs2044180572
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
rs2136702181
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs281865438
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs281865454
|
Pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs5030841
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs5030842
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs5030846
|
Pathogenic |
Phenylketonuria|not provided|PAH-related condition|Inborn genetic diseases [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716|MedGen:C3661900||MeSH:D030342,MedGen:C0950123] |
|
rs5030847
|
- |
- |
|
rs5030847
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs5030851
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62507326
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62507332
|
Pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62507335
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62507338
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:CN517202|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62507340
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62507347
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62508573
|
Pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62508578
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62508580
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62508588
|
- |
- |
|
rs62508588
|
LP/P |
Non-phenylketonuria hyperphenylalaninemia (Non-PKU HPA) [MIM:261600] |
|
rs62508694
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62508698
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62508698
|
Pathogenic |
Phenylketonuria|not provided|Inborn genetic diseases|Polymicrogyria, perisylvian, with cerebellar hypoplasia and arthrogryposis [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716|MedGen:C3661900|MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0014679,MedGen:C4225295,OMIM:616531] |
|
rs62508731
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:CN517202|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62508734
|
Pathogenic |
Phenylketonuria|not provided [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716|MedGen:C3661900] |
|
rs62508739
|
Pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62508752
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62509017
|
Pathogenic/Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62514902
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62514957
|
- |
- |
|
rs62514957
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62514958
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62514959
|
Pathogenic |
Phenylketonuria|not provided [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716|MedGen:C3661900] |
|
rs62516062
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62517181
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62635346
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62642916
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62642918
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62642928
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62642930
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62642931
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62642934
|
LP/P |
Non-phenylketonuria hyperphenylalaninemia (Non-PKU HPA) [MIM:261600] |
|
rs62642942
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62642944
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62644503
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs74503222
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs74603784
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs746203167
|
- |
- |
|
rs748337823
|
Pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs751203209
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs75193786
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs761817519
|
Pathogenic/Likely pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
rs76212747
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs762949770
|
Pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs76394784
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs767453024
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs768158086
|
- |
- |
|
rs796052017
|
LP/P |
Hyperphenylalaninemia (HPA) [MIM:261600] |
|
rs796064502
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
rn00401
|
Novobiocin biosynthesis
|
dbSNP |
Type |
Disease name |
|
-
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
rs118203916
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
rs181309650
|
- |
- |
|
rs2044180572
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
rs761817519
|
Pathogenic/Likely pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
rs768158086
|
- |
- |
hsa00410
|
beta-Alanine metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
Pathogenic |
Deficiency of malonyl-CoA decarboxylase [MONDO:MONDO:0009556,MedGen:C0342793,OMIM:248360,Orphanet:943] |
|
-
|
Pathogenic |
Beta-hydroxyisobutyryl-CoA deacylase deficiency [MONDO:MONDO:0009603,MedGen:C0342738,OMIM:250620,Orphanet:88639] |
|
-
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
-
|
Likely pathogenic |
Dihydropyrimidine dehydrogenase deficiency [MONDO:MONDO:0010130,MedGen:C1959620,OMIM:274270,Orphanet:1675] |
|
-
|
Pathogenic |
Gamma-aminobutyric acid transaminase deficiency [MONDO:MONDO:0013166,MedGen:C0342708,OMIM:613163,Orphanet:2066] |
|
-
|
LP/P |
Microphthalmia, isolated, 8 (MCOP8) [MIM:615113] |
|
-
|
Likely pathogenic |
Isolated microphthalmia 8 [MONDO:MONDO:0014050,MedGen:C3554524,OMIM:615113,Orphanet:2542] |
|
-
|
Likely pathogenic |
Developmental and epileptic encephalopathy 89 [MONDO:MONDO:0030856,MedGen:C5436853,OMIM:619124] |
|
.
|
- |
- |
|
rs104894528
|
Pathogenic |
Deficiency of malonyl-CoA decarboxylase|not provided [MONDO:MONDO:0009556,MedGen:C0342793,OMIM:248360,Orphanet:943|MedGen:C3661900] |
|
rs1057516671
|
Likely pathogenic |
Dihydropyrimidine dehydrogenase deficiency [MONDO:MONDO:0010130,MedGen:C1959620,OMIM:274270,Orphanet:1675] |
|
rs115638369
|
- |
- |
|
rs1170817007
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1212037891
|
- |
- |
|
rs1213234644
|
- |
- |
|
rs121434578
|
Pathogenic |
Gamma-aminobutyric acid transaminase deficiency [MONDO:MONDO:0013166,MedGen:C0342708,OMIM:613163,Orphanet:2066] |
|
rs121912707
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Seizure|Pyridoxine-dependent epilepsy caused by ALDH7A1 mutant [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|Human Phenotype Ontology:HP:0001250,Human Phenotype Ontology:HP:0001275,Human Phenotype Ontology:HP:0001303,Human Phenotype Ontology:HP:0002125,Human Phenotype Ontology:HP:0002182,Human Phenotype Ontology:HP:0002279,Human Phenotype Ontology:HP:0002306,Human Phenotype Ontology:HP:0002348,Human Phenotype Ontology:HP:0002391,Human Phenotype Ontology:HP:0002417,Human Phenotype Ontology:HP:0002430,Human Phenotype Ontology:HP:0002431,Human Phenotype Ontology:HP:0002432,Human Phenotype Ontology:HP:0002434,Human Phenotype Ontology:HP:0002437,Human Phenotype Ontology:HP:0002466,Human Phenotype Ontology:HP:0002479,Human Phenotype Ontology:HP:0002794,Human Phenotype Ontology:HP:0006997,Human Phenotype Ontology:HP:0010520,MedGen:C0036572|MONDO:MONDO:0020741,MedGen:CN293409] |
|
rs121912711
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs121918329
|
LP/P |
3-hydroxyisobutryl-CoA hydrolase deficiency (HIBCHD) [MIM:250620] |
|
rs1220608789
|
Likely pathogenic |
Dihydropyrimidine dehydrogenase deficiency [MONDO:MONDO:0010130,MedGen:C1959620,OMIM:274270,Orphanet:1675] |
|
rs1311982393
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1330753702
|
- |
- |
|
rs1364971527
|
Pathogenic/Likely pathogenic |
Beta-hydroxyisobutyryl-CoA deacylase deficiency|See cases [MONDO:MONDO:0009603,MedGen:C0342738,OMIM:250620,Orphanet:88639|] |
|
rs1375748581
|
Pathogenic |
Deficiency of malonyl-CoA decarboxylase [MONDO:MONDO:0009556,MedGen:C0342793,OMIM:248360,Orphanet:943] |
|
rs140602333
|
- |
- |
|
rs1421045311
|
- |
- |
|
rs143826965
|
- |
- |
|
rs145567714
|
- |
- |
|
rs147617160
|
- |
- |
|
rs1555538351
|
- |
- |
|
rs1750309299
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1750388096
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1801266
|
- |
- |
|
rs192178446
|
- |
- |
|
rs200207185
|
- |
- |
|
rs200600524
|
- |
- |
|
rs201397255
|
- |
- |
|
rs201948406
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Inborn genetic diseases [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs35097308
|
LB/B |
- |
|
rs367938014
|
- |
- |
|
rs368127499
|
- |
- |
|
rs368327291
|
- |
- |
|
rs372255821
|
- |
- |
|
rs372660425
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs527580106
|
- |
- |
|
rs530957915
|
- |
- |
|
rs543446294
|
- |
- |
|
rs547918064
|
- |
- |
|
rs547918064
|
Likely pathogenic |
not provided|Isolated microphthalmia 8 [MedGen:C3661900|MONDO:MONDO:0014050,MedGen:C3554524,OMIM:615113,Orphanet:2542] |
|
rs56005131
|
- |
- |
|
rs567024602
|
- |
- |
|
rs59086055
|
- |
- |
|
rs629682
|
- |
- |
|
rs6943147
|
- |
- |
|
rs748725086
|
- |
- |
|
rs751841116
|
- |
- |
|
rs756684474
|
- |
- |
|
rs757528079
|
- |
- |
|
rs759043861
|
Pathogenic/Likely pathogenic |
Deficiency of malonyl-CoA decarboxylase [MONDO:MONDO:0009556,MedGen:C0342793,OMIM:248360,Orphanet:943] |
|
rs761288637
|
- |
- |
|
rs761295869
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs762601763
|
- |
- |
|
rs767254883
|
- |
- |
|
rs768495738
|
- |
- |
|
rs770114459
|
Pathogenic |
Beta-hydroxyisobutyryl-CoA deacylase deficiency [MONDO:MONDO:0009603,MedGen:C0342738,OMIM:250620,Orphanet:88639] |
|
rs770302701
|
- |
- |
|
rs773503933
|
- |
- |
|
rs774376343
|
- |
- |
|
rs776421832
|
- |
- |
|
rs776973423
|
- |
- |
|
rs779820787
|
- |
- |
|
rs781507152
|
- |
- |
|
rs781555217
|
Pathogenic |
Gamma-aminobutyric acid transaminase deficiency [MONDO:MONDO:0013166,MedGen:C0342708,OMIM:613163,Orphanet:2066] |
|
rs796052271
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs864622558
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs900794676
|
- |
- |
hsa00430
|
Taurine and hypotaurine metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Fanconi renotubular syndrome 1 (FRTS1) [MIM:134600] |
|
-
|
Pathogenic |
Arginine:glycine amidinotransferase deficiency [MONDO:MONDO:0012996,MedGen:C2675179,OMIM:612718,Orphanet:35704] |
|
-
|
Likely pathogenic |
Developmental and epileptic encephalopathy 89 [MONDO:MONDO:0030856,MedGen:C5436853,OMIM:619124] |
|
.
|
- |
- |
|
rs1049568
|
- |
- |
|
rs1062459
|
LB/B |
- |
|
rs112441786
|
- |
- |
|
rs121909732
|
Pathogenic |
Hyperinsulinism-hyperammonemia syndrome [MONDO:MONDO:0011717,MedGen:C1847555,OMIM:606762,Orphanet:35878] |
|
rs1288775
|
LB/B |
- |
|
rs1325460408
|
Likely pathogenic |
Fanconi renotubular syndrome 1 [MONDO:MONDO:0024525,MedGen:C4551503,OMIM:134600] |
|
rs140387106
|
- |
- |
|
rs142814307
|
LP/P |
Cerebral creatine deficiency syndrome 3 (CCDS3) [MIM:612718] |
|
rs147168294
|
- |
- |
|
rs1474809549
|
- |
- |
|
rs147804855
|
LP/P |
Cerebral creatine deficiency syndrome 3 (CCDS3) [MIM:612718] |
|
rs149033118
|
- |
- |
|
rs151037870
|
- |
- |
|
rs1566842679
|
Likely pathogenic |
Arginine:glycine amidinotransferase deficiency [MONDO:MONDO:0012996,MedGen:C2675179,OMIM:612718,Orphanet:35704] |
|
rs1889422994
|
LP/P |
Fanconi renotubular syndrome 1 (FRTS1) [MIM:134600] |
|
rs202093592
|
- |
- |
|
rs2133777379
|
Pathogenic |
Hyperinsulinism-hyperammonemia syndrome [MONDO:MONDO:0011717,MedGen:C1847555,OMIM:606762,Orphanet:35878] |
|
rs375253960
|
- |
- |
|
rs377578020
|
LP/P |
Cerebral creatine deficiency syndrome 3 (CCDS3) [MIM:612718] |
|
rs397514708
|
Pathogenic |
Arginine:glycine amidinotransferase deficiency|Fanconi renotubular syndrome 1 [MONDO:MONDO:0012996,MedGen:C2675179,OMIM:612718,Orphanet:35704|MONDO:MONDO:0024525,MedGen:C4551503,OMIM:134600]; Arginine:glycine amidinotransferase deficiency [MONDO:MONDO:0012996,MedGen:C2675179,OMIM:612718,Orphanet:35704] |
|
rs545752791
|
- |
- |
|
rs556081405
|
- |
- |
|
rs562584675
|
- |
- |
|
rs566644923
|
- |
- |
|
rs576149278
|
- |
- |
|
rs747608698
|
- |
- |
|
rs749093544
|
- |
- |
|
rs763463911
|
- |
- |
|
rs776806726
|
- |
- |
|
rs776965057
|
- |
- |
|
rs779634821
|
- |
- |
hsa00450
|
Selenocompound metabolism
|
dbSNP |
Type |
Disease name |
|
.
|
- |
- |
|
rs1205037339
|
- |
- |
|
rs1309003036
|
- |
- |
|
rs1309003036
|
Pathogenic/Likely pathogenic |
not provided|Pontocerebellar hypoplasia type 2D [MedGen:C3661900|MONDO:MONDO:0013438,MedGen:C3151140,OMIM:613811,Orphanet:2524] |
|
rs1350170100
|
- |
- |
|
rs1357895717
|
- |
- |
|
rs139166171
|
- |
- |
|
rs140928408
|
- |
- |
|
rs145370575
|
- |
- |
|
rs145639940
|
- |
- |
|
rs147044875
|
- |
- |
|
rs182887196
|
- |
- |
|
rs183618664
|
- |
- |
|
rs190803777
|
- |
- |
|
rs199586854
|
- |
- |
|
rs201222740
|
- |
- |
|
rs28941786
|
LP/P |
Cystathioninuria (CSTNU) [MIM:219500] |
|
rs56350236
|
LB/B |
- |
|
rs746356539
|
- |
- |
|
rs751383208
|
- |
- |
|
rs761270970
|
- |
- |
|
rs765882602
|
- |
- |
|
rs766480924
|
- |
- |
|
rs767956492
|
- |
- |
|
rs769204528
|
- |
- |
|
rs769879789
|
- |
- |
|
rs773656274
|
- |
- |
|
rs775097749
|
- |
- |
|
rs781352323
|
- |
- |
|
rs891557080
|
- |
- |
rn00460
|
Cyanoamino acid metabolism
|
dbSNP |
Type |
Disease name |
|
.
|
- |
- |
|
rs1262762031
|
- |
- |
|
rs146282307
|
- |
- |
|
rs151037870
|
- |
- |
|
rs17004876
|
LB/B |
- |
|
rs2330126
|
- |
- |
|
rs370269377
|
- |
- |
|
rs748683840
|
- |
- |
|
rs754079169
|
- |
- |
|
rs758066653
|
- |
- |
|
rs759784953
|
- |
- |
|
rs768492092
|
- |
- |
hsa00470
|
D-Amino acid metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
.
|
- |
- |
|
rs113576450
|
- |
- |
|
rs1170817007
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs121912707
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Seizure|Pyridoxine-dependent epilepsy caused by ALDH7A1 mutant [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|Human Phenotype Ontology:HP:0001250,Human Phenotype Ontology:HP:0001275,Human Phenotype Ontology:HP:0001303,Human Phenotype Ontology:HP:0002125,Human Phenotype Ontology:HP:0002182,Human Phenotype Ontology:HP:0002279,Human Phenotype Ontology:HP:0002306,Human Phenotype Ontology:HP:0002348,Human Phenotype Ontology:HP:0002391,Human Phenotype Ontology:HP:0002417,Human Phenotype Ontology:HP:0002430,Human Phenotype Ontology:HP:0002431,Human Phenotype Ontology:HP:0002432,Human Phenotype Ontology:HP:0002434,Human Phenotype Ontology:HP:0002437,Human Phenotype Ontology:HP:0002466,Human Phenotype Ontology:HP:0002479,Human Phenotype Ontology:HP:0002794,Human Phenotype Ontology:HP:0006997,Human Phenotype Ontology:HP:0010520,MedGen:C0036572|MONDO:MONDO:0020741,MedGen:CN293409] |
|
rs121912711
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs1239594775
|
- |
- |
|
rs1311982393
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs137933272
|
- |
- |
|
rs140015394
|
- |
- |
|
rs143550642
|
- |
- |
|
rs1558986214
|
LP/P |
Infantile cataract, skin abnormalities, glutamate excess, and impaired intellectual development (CASGID) [MIM:618339] |
|
rs1750309299
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1750388096
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs201835306
|
- |
- |
|
rs201948406
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Inborn genetic diseases [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs2124851950
|
Likely pathogenic |
Infantile cataract, skin abnormalities, glutamate excess, and impaired intellectual development [MONDO:MONDO:0032685,MedGen:C5193037,OMIM:618339] |
|
rs372660425
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs556400964
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs754054554
|
- |
- |
|
rs761295869
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs762922297
|
- |
- |
|
rs772446143
|
- |
- |
|
rs773503933
|
- |
- |
|
rs776421832
|
- |
- |
|
rs796052271
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs864622558
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
hsa00480
|
Glutathione metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Glutathione synthetase deficiency (GSS deficiency) [MIM:266130] |
|
-
|
LP/P |
Anemia, non-spherocytic hemolytic, due to G6PD deficiency (NSHA) [MIM:300908] |
|
-
|
Likely pathogenic |
Anemia, nonspherocytic hemolytic, due to G6PD deficiency [MONDO:MONDO:0010480,MedGen:C2720289,OMIM:300908,Orphanet:466026] |
|
-
|
Likely pathogenic |
Syndromic X-linked intellectual disability Snyder type [MONDO:MONDO:0010664,MedGen:C0796160,OMIM:309583,Orphanet:3063] |
|
-
|
Pathogenic |
Progressive external ophthalmoplegia with mitochondrial dna deletions, autosomal recessive 6 [MONDO:MONDO:0957993,MedGen:CN375864,OMIM:620647] |
|
.
|
- |
- |
|
rs1040177874
|
- |
- |
|
rs1040271400
|
- |
- |
|
rs1050829
|
LB/B |
- |
|
rs1052661
|
LB/B |
- |
|
rs1053055422
|
- |
- |
|
rs1057519736
|
LB/B |
- |
|
rs1057519736
|
Pathogenic; risk factor |
Acute myeloid leukemia|Acute myocardial infarction [Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|MONDO:MONDO:0004781,MedGen:C0155626] |
|
rs1057519906
|
LB/B |
- |
|
rs1057519906
|
LP/P |
Glioma (GLM) [MIM:137800] |
|
rs1057519906
|
Likely pathogenic; risk factor |
Neoplasm of the large intestine|Neoplasm of brain|Brainstem glioma|Acute myeloid leukemia|Hepatocellular carcinoma|Acute myocardial infarction [Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MONDO:MONDO:0004781,MedGen:C0155626] |
|
rs11509436
|
LB/B |
- |
|
rs11509438
|
LB/B |
- |
|
rs11509439
|
LB/B |
- |
|
rs1207708075
|
- |
- |
|
rs121909308
|
LP/P |
Glutathione synthetase deficiency (GSS deficiency) [MIM:266130] |
|
rs121913499
|
US |
Colorectal cancer |
|
rs121913499
|
Pathogenic/Likely pathogenic |
Lung adenocarcinoma|Breast neoplasm|Neoplasm of brain|Hepatocellular carcinoma|Astrocytoma|Medulloblastoma|Malignant melanoma of skin|Transitional cell carcinoma of the bladder|Neoplasm of the large intestine|Multiple myeloma|Prostate adenocarcinoma|Brainstem glioma|Glioblastoma|Myelodysplastic syndrome|Acute myeloid leukemia|Adenoid cystic carcinoma|not provided|Enchondromatosis|Enchondromatosis [Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0009592,MONDO:MONDO:0019781,MeSH:D001254,MedGen:C0004114|Human Phenotype Ontology:HP:0002885,MONDO:MONDO:0007959,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:616|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|MONDO:MONDO:0004971,MeSH:D003528,MedGen:C0010606|MedGen:C3661900|Human Phenotype Ontology:HP:0005701,MONDO:MONDO:0008145,MedGen:C0014084,OMIM:166000,Orphanet:296|Human Phenotype Ontology:HP:0005701,MONDO:MONDO:0008145,MedGen:C0014084,OMIM:166000,Orphanet:296]; Maffucci syndrome|Glioma susceptibility 1|Maffucci syndrome [MONDO:MONDO:0013808,MedGen:C0024454,OMIM:614569,Orphanet:163634|MONDO:MONDO:0024498,MedGen:C2750850,OMIM:137800|MONDO:MONDO:0013808,MedGen:C0024454,OMIM:614569,Orphanet:163634] |
|
rs121913500
|
US |
A glioma sample |
|
rs121913500
|
Pathogenic/Likely pathogenic |
Glioblastoma multiforme, somatic|Transitional cell carcinoma of the bladder|Myelodysplastic syndrome|Medulloblastoma|Malignant melanoma of skin|Hepatocellular carcinoma|Lung adenocarcinoma|Brainstem glioma|Breast neoplasm|Prostate adenocarcinoma|Multiple myeloma|Neoplasm of brain|Acute myeloid leukemia|Oligodendroglioma|Adenoid cystic carcinoma|Neoplasm of the large intestine|Astrocytoma|Glioblastoma|Metaphyseal chondromatosis with D-2-hydroxyglutaric aciduria|not provided|Glioma susceptibility 1|Enchondromatosis|Metaphyseal chondromatosis [MedGen:C4016231|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0002885,MONDO:MONDO:0007959,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:616|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0033681,MONDO:MONDO:0016695,MeSH:D009837,MedGen:C0028945,Orphanet:251627|MONDO:MONDO:0004971,MeSH:D003528,MedGen:C0010606|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0009592,MONDO:MONDO:0019781,MeSH:D001254,MedGen:C0004114|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0013941,MedGen:C3553958,OMIM:614875,Orphanet:99646|MedGen:C3661900|MONDO:MONDO:0024498,MedGen:C2750850,OMIM:137800|Human Phenotype Ontology:HP:0005701,MONDO:MONDO:0008145,MedGen:C0014084,OMIM:166000,Orphanet:296|] |
|
rs121913502
|
LP/P |
D-2-hydroxyglutaric aciduria 2 (D2HGA2) [MIM:613657] |
|
rs121913502
|
Pathogenic/Likely pathogenic |
D-2-hydroxyglutaric aciduria 2|Squamous cell carcinoma of the head and neck|not provided|Acute myeloid leukemia|Neoplasm of the large intestine|Myelodysplastic syndrome|Multiple myeloma|Inborn genetic diseases [MONDO:MONDO:0013345,MedGen:C3150909,OMIM:613657,Orphanet:79315|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MedGen:C3661900|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MeSH:D030342,MedGen:C0950123] |
|
rs121913503
|
Pathogenic/Likely pathogenic; risk factor |
Hepatocellular carcinoma|Acute myeloid leukemia|Neoplasm of the large intestine|Neoplasm of brain|Brainstem glioma|Acute myocardial infarction [Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|MONDO:MONDO:0004781,MedGen:C0155626] |
|
rs121913503
|
LP/P |
Glioma (GLM) [MIM:137800] |
|
rs121913503
|
Pathogenic/Likely pathogenic; risk factor |
Acute myeloid leukemia|Hepatocellular carcinoma|Neoplasm of brain|Myelodysplastic syndrome|Neoplasm of the large intestine|Brainstem glioma|Acute myocardial infarction [Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|MONDO:MONDO:0004781,MedGen:C0155626] |
|
rs1223667143
|
- |
- |
|
rs1292504288
|
- |
- |
|
rs1325986563
|
LP/P |
Glutathione synthetase deficiency (GSS deficiency) [MIM:266130] |
|
rs1326916949
|
- |
- |
|
rs1344907223
|
- |
- |
|
rs1345036090
|
Pathogenic |
Hemolytic anemia due to glutathione reductase deficiency [MONDO:MONDO:0019531,MedGen:C5231513,OMIM:618660,Orphanet:90030] |
|
rs1347308563
|
- |
- |
|
rs137852316
|
LP/P |
Anemia, non-spherocytic hemolytic, due to G6PD deficiency (NSHA) [MIM:300908] |
|
rs137852325
|
LP/P |
Anemia, non-spherocytic hemolytic, due to G6PD deficiency (NSHA) [MIM:300908] |
|
rs137852329
|
LP/P |
Anemia, non-spherocytic hemolytic, due to G6PD deficiency (NSHA) [MIM:300908] |
|
rs137852341
|
LB/B |
- |
|
rs137852349
|
LP/P |
Anemia, non-spherocytic hemolytic, due to G6PD deficiency (NSHA) [MIM:300908] |
|
rs1379218695
|
- |
- |
|
rs138014515
|
- |
- |
|
rs140665617
|
- |
- |
|
rs1412501773
|
- |
- |
|
rs141805635
|
- |
- |
|
rs143742821
|
- |
- |
|
rs144377982
|
- |
- |
|
rs146282307
|
- |
- |
|
rs1480930429
|
- |
- |
|
rs151037870
|
- |
- |
|
rs1557229416
|
- |
- |
|
rs1557229683
|
LP/P |
Anemia, non-spherocytic hemolytic, due to G6PD deficiency (NSHA) [MIM:300908] |
|
rs1557229736
|
Pathogenic/Likely pathogenic |
Inborn genetic diseases|Anemia, nonspherocytic hemolytic, due to G6PD deficiency [MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0010480,MedGen:C2720289,OMIM:300908,Orphanet:466026] |
|
rs1557230580
|
- |
- |
|
rs1586033745
|
LP/P |
Hemolytic anemia due to glutathione reductase deficiency (HAGRD) [MIM:618660] |
|
rs1602210346
|
Pathogenic |
Syndromic X-linked intellectual disability Snyder type [MONDO:MONDO:0010664,MedGen:C0796160,OMIM:309583,Orphanet:3063] |
|
rs1695
|
LB/B |
- |
|
rs17004876
|
LB/B |
- |
|
rs1924648986
|
Likely pathogenic |
Syndromic X-linked intellectual disability Snyder type [MONDO:MONDO:0010664,MedGen:C0796160,OMIM:309583,Orphanet:3063] |
|
rs1924650670
|
Pathogenic |
Syndromic X-linked intellectual disability Snyder type [MONDO:MONDO:0010664,MedGen:C0796160,OMIM:309583,Orphanet:3063] |
|
rs200266956
|
- |
- |
|
rs201522765
|
- |
- |
|
rs202002774
|
- |
- |
|
rs2148328852
|
Pathogenic/Likely pathogenic |
not provided|Anemia, nonspherocytic hemolytic, due to G6PD deficiency [MedGen:C3661900|MONDO:MONDO:0010480,MedGen:C2720289,OMIM:300908,Orphanet:466026] |
|
rs2148328873
|
Likely pathogenic |
Anemia, nonspherocytic hemolytic, due to G6PD deficiency [MONDO:MONDO:0010480,MedGen:C2720289,OMIM:300908,Orphanet:466026] |
|
rs2330126
|
- |
- |
|
rs2330837
|
LB/B |
- |
|
rs2330838
|
LB/B |
- |
|
rs2397118
|
- |
- |
|
rs267606870
|
LP/P |
D-2-hydroxyglutaric aciduria 2 (D2HGA2) [MIM:613657] |
|
rs267607076
|
LP/P |
Intellectual developmental disorder, X-linked, syndromic, Snyder-Robinson type (MRXSSR) [MIM:309583] |
|
rs28938472
|
Pathogenic |
Glutathione synthetase deficiency without 5-oxoprolinuria|Gluthathione synthetase deficiency [MONDO:MONDO:0009284,MedGen:C1856399,OMIM:231900,Orphanet:289849,Orphanet:32|Human Phenotype Ontology:HP:0003343,MONDO:MONDO:0017909,MedGen:C0398746,Orphanet:32] |
|
rs28938472
|
LP/P |
Glutathione synthetase deficiency (GSS deficiency) [MIM:266130] |
|
rs367926309
|
- |
- |
|
rs368521899
|
- |
- |
|
rs370269377
|
- |
- |
|
rs370351723
|
- |
- |
|
rs371856135
|
- |
- |
|
rs371911407
|
- |
- |
|
rs373232513
|
- |
- |
|
rs376092764
|
- |
- |
|
rs387906468
|
Pathogenic/Likely pathogenic |
G6PD PUERTO LIMON|Anemia, nonspherocytic hemolytic, due to G6PD deficiency|not provided [|MONDO:MONDO:0010480,MedGen:C2720289,OMIM:300908,Orphanet:466026|MedGen:C3661900] |
|
rs3895576
|
LB/B |
- |
|
rs397515551
|
Pathogenic |
Syndromic X-linked intellectual disability Snyder type [MONDO:MONDO:0010664,MedGen:C0796160,OMIM:309583,Orphanet:3063] |
|
rs4049829
|
- |
- |
|
rs449856
|
LB/B |
- |
|
rs45529437
|
LB/B |
- |
|
rs551051195
|
- |
- |
|
rs62225862
|
- |
- |
|
rs745389409
|
- |
- |
|
rs747951792
|
- |
- |
|
rs748780943
|
- |
- |
|
rs749994897
|
- |
- |
|
rs752133024
|
- |
- |
|
rs752731774
|
- |
- |
|
rs754624667
|
- |
- |
|
rs754993807
|
- |
- |
|
rs759225435
|
- |
- |
|
rs760126037
|
- |
- |
|
rs763745871
|
- |
- |
|
rs763911260
|
- |
- |
|
rs764599344
|
- |
- |
|
rs76645461
|
LP/P |
Anemia, non-spherocytic hemolytic, due to G6PD deficiency (NSHA) [MIM:300908] |
|
rs76645461
|
Pathogenic/Likely pathogenic |
G6PD AURES|not provided|Anemia, nonspherocytic hemolytic, due to G6PD deficiency|G6PD deficiency|Anemia, nonspherocytic hemolytic, due to G6PD deficiency [|MedGen:C3661900|MONDO:MONDO:0010480,MedGen:C2720289,OMIM:300908,Orphanet:466026|MONDO:MONDO:0005775,MedGen:C2939465|MONDO:MONDO:0010480,MedGen:C2720289,OMIM:300908,Orphanet:466026]; Malaria, susceptibility to|Malaria, susceptibility to [MONDO:MONDO:0021024,MedGen:C1970028,OMIM:611162,Orphanet:673|MONDO:MONDO:0021024,MedGen:C1970028,OMIM:611162,Orphanet:673] |
|
rs767061831
|
Likely pathogenic |
D-2-hydroxyglutaric aciduria 2 [MONDO:MONDO:0013345,MedGen:C3150909,OMIM:613657,Orphanet:79315] |
|
rs767434442
|
- |
- |
|
rs769967246
|
Pathogenic |
Spondylometaphyseal dysplasia, Sedaghatian type [MONDO:MONDO:0009593,MedGen:C1855229,OMIM:250220,Orphanet:93317] |
|
rs770335357
|
- |
- |
|
rs771331384
|
- |
- |
|
rs771350104
|
- |
- |
|
rs774638750
|
- |
- |
|
rs778720785
|
- |
- |
|
rs778816311
|
- |
- |
|
rs779416718
|
- |
- |
|
rs780640505
|
- |
- |
|
rs781019832
|
- |
- |
|
rs782090947
|
Pathogenic/Likely pathogenic |
not provided|Anemia, nonspherocytic hemolytic, due to G6PD deficiency [MedGen:C3661900|MONDO:MONDO:0010480,MedGen:C2720289,OMIM:300908,Orphanet:466026] |
|
rs782436684
|
- |
- |
|
rs78365220
|
LP/P |
Anemia, non-spherocytic hemolytic, due to G6PD deficiency (NSHA) [MIM:300908] |
|
rs78478128
|
LP/P |
Anemia, non-spherocytic hemolytic, due to G6PD deficiency (NSHA) [MIM:300908] |
|
rs78478128
|
Pathogenic |
G6PD ORISSA|Anemia, nonspherocytic hemolytic, due to G6PD deficiency|not provided|G6PD deficiency|Malaria, susceptibility to [|MONDO:MONDO:0010480,MedGen:C2720289,OMIM:300908,Orphanet:466026|MedGen:C3661900|MONDO:MONDO:0005775,MedGen:C2939465|MONDO:MONDO:0021024,MedGen:C1970028,OMIM:611162,Orphanet:673] |
|
rs8177445
|
LB/B |
- |
|
rs8190955
|
LB/B |
- |
|
rs8190997
|
LB/B |
- |
|
rs8192111
|
LB/B |
- |
|
rs896909854
|
- |
- |
|
rs926868561
|
- |
- |
|
rs949782234
|
- |
- |
|
rs962461488
|
- |
- |
|
rs981510076
|
- |
- |
hsa00500
|
Starch and sucrose metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
-
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
-
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
-
|
Likely pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
-
|
Pathogenic |
Glycogen storage disease, type V [MONDO:MONDO:0009293,MedGen:C0017924,OMIM:232600,Orphanet:368] |
|
-
|
Likely pathogenic |
Glycogen storage disease, type VI [MONDO:MONDO:0009294,MedGen:C0017925,OMIM:232700,Orphanet:369] |
|
-
|
LP/P |
Diabetes mellitus, permanent neonatal, 1 (PNDM1) [MIM:606176] |
|
-
|
Likely pathogenic |
Maturity onset diabetes mellitus in young [Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
-
|
LP/P |
Congenital disorder of glycosylation 1T (CDG1T) [MIM:614921] |
|
.
|
- |
- |
|
rs1011631903
|
Pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs104894009
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs104894015
|
LP/P |
Hyperinsulinemic hypoglycemia, familial, 3 (HHF3) [MIM:602485] |
|
rs1050535872
|
- |
- |
|
rs1057516349
|
Pathogenic/Likely pathogenic |
Glycogen storage disease, type V [MONDO:MONDO:0009293,MedGen:C0017924,OMIM:232600,Orphanet:368] |
|
rs1057516600
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs1057517145
|
Pathogenic/Likely pathogenic |
Glycogen storage disease, type V [MONDO:MONDO:0009293,MedGen:C0017924,OMIM:232600,Orphanet:368] |
|
rs1057517361
|
Likely pathogenic |
Glycogen storage disease, type V [MONDO:MONDO:0009293,MedGen:C0017924,OMIM:232600,Orphanet:368] |
|
rs1064794848
|
LP/P |
Neurodevelopmental disorder with visual defects and brain anomalies (NEDVIBA) [MIM:618547] |
|
rs1064794848
|
Pathogenic/Likely pathogenic |
not provided|Neurodevelopmental disorder with visual defects and brain anomalies|Retinitis pigmentosa|Inborn genetic diseases|Hemolytic anemia due to hexokinase deficiency|Retinitis pigmentosa 79|Autism spectrum disorder [MedGen:C3661900|MONDO:MONDO:0032807,MedGen:C5231404,OMIM:618547|Human Phenotype Ontology:HP:0000547,MONDO:MONDO:0019200,MeSH:D012174,MedGen:C0035334,OMIM:268000,OMIM:PS268000,Orphanet:791|MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0009340,MedGen:C3150343,OMIM:235700,Orphanet:90031|MONDO:MONDO:0044320,MedGen:C4479526,OMIM:617460|MONDO:MONDO:0005258,MeSH:D000067877,MedGen:C1510586,Orphanet:106] |
|
rs1064795154
|
LP/P |
Neurodevelopmental disorder with visual defects and brain anomalies (NEDVIBA) [MIM:618547] |
|
rs1131691416
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1131691416
|
Pathogenic/Likely pathogenic |
not provided|Maturity-onset diabetes of the young type 2|Type 2 diabetes mellitus [MedGen:C3661900|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853]; Hyperinsulinism due to glucokinase deficiency [MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299]; Permanent neonatal diabetes mellitus 1 [MONDO:MONDO:0100165,MedGen:C5393570,OMIM:606176]; Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs113993976
|
LP/P |
Glycogen storage disease 6 (GSD6) [MIM:232700] |
|
rs113993977
|
LP/P |
Glycogen storage disease 6 (GSD6) [MIM:232700] |
|
rs113993978
|
Pathogenic |
Glycogen storage disease, type VI|not provided [MONDO:MONDO:0009294,MedGen:C0017925,OMIM:232700,Orphanet:369|MedGen:CN517202] |
|
rs113993979
|
- |
- |
|
rs113993979
|
Pathogenic |
Glycogen storage disease, type VI [MONDO:MONDO:0009294,MedGen:C0017925,OMIM:232700,Orphanet:369] |
|
rs113993980
|
Pathogenic |
Glycogen storage disease, type VI [MONDO:MONDO:0009294,MedGen:C0017925,OMIM:232700,Orphanet:369] |
|
rs113993986
|
Likely pathogenic |
Glycogen storage disease, type VI [MONDO:MONDO:0009294,MedGen:C0017925,OMIM:232700,Orphanet:369] |
|
rs1178161506
|
- |
- |
|
rs119103260
|
Likely pathogenic |
Glycogen storage disease, type V [MONDO:MONDO:0009293,MedGen:C0017924,OMIM:232600,Orphanet:368] |
|
rs121907937
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs1232001857
|
Likely pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs1240333808
|
- |
- |
|
rs1243515778
|
Pathogenic/Likely pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs1270571213
|
LP/P |
Interstitial nephritis, karyomegalic (KMIN) [MIM:614817] |
|
rs1286804191
|
LP/P |
Diabetes mellitus, permanent neonatal, 1 (PNDM1) [MIM:606176] |
|
rs1301021797
|
LP/P |
Congenital disorder of glycosylation 1T (CDG1T) [MIM:614921] |
|
rs1320810473
|
LP/P |
Congenital disorder of glycosylation 1T (CDG1T) [MIM:614921] |
|
rs1332966015
|
Pathogenic |
not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1360415315
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1360415315
|
Pathogenic |
not provided|Maturity-onset diabetes of the young type 2|Hyperinsulinism due to glucokinase deficiency [MedGen:C3661900|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299]; Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552]; Permanent neonatal diabetes mellitus [MONDO:MONDO:0100164,MedGen:C1833104,OMIM:PS606176,Orphanet:99885]; Type 2 diabetes mellitus|Maturity onset diabetes mellitus in young|Monogenic diabetes [Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs1375656631
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs137853582
|
- |
- |
|
rs139162483
|
- |
- |
|
rs140826989
|
Pathogenic |
Glycogen storage disease, type II|not provided [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365|MedGen:C3661900] |
|
rs141315355
|
- |
- |
|
rs141533320
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs142481170
|
- |
- |
|
rs142752477
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs1432841878
|
Pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs143550601
|
Pathogenic/Likely pathogenic |
Glycogen storage disease, type V [MONDO:MONDO:0009293,MedGen:C0017924,OMIM:232600,Orphanet:368] |
|
rs143938918
|
- |
- |
|
rs1441649062
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs144723656
|
Pathogenic |
Maturity-onset diabetes of the young type 2|not provided [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:CN517202] |
|
rs144723656
|
Pathogenic/Likely pathogenic |
not provided|Maturity onset diabetes mellitus in young [MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1447365901
|
Pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs146153216
|
- |
- |
|
rs1470521850
|
Pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs147065275
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1476637197
|
Pathogenic |
Maturity-onset diabetes of the young type 2|Monogenic diabetes [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs147984615
|
- |
- |
|
rs148311934
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs148311934
|
Pathogenic |
Maturity-onset diabetes of the young type 2|not provided|Maturity onset diabetes mellitus in young|Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552]; Type 2 diabetes mellitus [Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853]; Hyperinsulinism due to glucokinase deficiency [MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299]; Permanent neonatal diabetes mellitus 1|Monogenic diabetes [MONDO:MONDO:0100165,MedGen:C5393570,OMIM:606176|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs1490487177
|
- |
- |
|
rs150232968
|
- |
- |
|
rs150547274
|
Pathogenic/Likely pathogenic |
not provided|Glycogen storage disease, type VI [MedGen:C3661900|MONDO:MONDO:0009294,MedGen:C0017925,OMIM:232700,Orphanet:369] |
|
rs150608402
|
- |
- |
|
rs1554334872
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2|Maturity onset diabetes mellitus in young [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1554334905
|
Likely pathogenic |
not specified|not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [MedGen:CN169374|MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1554335132
|
Pathogenic |
not specified|Maturity onset diabetes mellitus in young|Monogenic diabetes [MedGen:CN169374|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs1554335135
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1554335135
|
Pathogenic/Likely pathogenic |
not provided|Maturity onset diabetes mellitus in young [MedGen:CN517202|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1554335761
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1562711915
|
Pathogenic |
not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1562715426
|
Pathogenic |
not provided|Maturity onset diabetes mellitus in young [MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1562717053
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1562717053
|
Pathogenic |
not provided|Maturity-onset diabetes of the young type 2 [MedGen:C3661900|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552]; Permanent neonatal diabetes mellitus 1 [MONDO:MONDO:0100165,MedGen:C5393570,OMIM:606176]; Type 2 diabetes mellitus [Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853]; Hyperinsulinism due to glucokinase deficiency|Monogenic diabetes|Maturity onset diabetes mellitus in young [MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1564557037
|
LP/P |
Neurodevelopmental disorder with visual defects and brain anomalies (NEDVIBA) [MIM:618547] |
|
rs1564557037
|
Likely pathogenic |
Neurodevelopmental disorder with visual defects and brain anomalies|Neurodevelopmental abnormality|Charcot-Marie-Tooth disease type 4G [MONDO:MONDO:0032807,MedGen:C5231404,OMIM:618547|Human Phenotype Ontology:HP:0012759,MedGen:C4022737|MONDO:MONDO:0011534,MedGen:C1854449,OMIM:605285,Orphanet:99953] |
|
rs1583591303
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1583599303
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1583599303
|
Pathogenic/Likely pathogenic/Likely risk allele |
not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1800299
|
LB/B |
- |
|
rs1832269
|
- |
- |
|
rs190285241
|
- |
- |
|
rs193922272
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs193922281
|
Pathogenic/Likely pathogenic |
Maturity-onset diabetes of the young type 2|not provided|Maturity onset diabetes mellitus in young [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs193922282
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs193922282
|
LP/P |
Diabetes mellitus, permanent neonatal, 1 (PNDM1) [MIM:606176] |
|
rs193922290
|
Likely pathogenic/Likely risk allele |
Maturity-onset diabetes of the young type 2|Maturity onset diabetes mellitus in young [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs193922297
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs193922311
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs193922319
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2|Maturity onset diabetes mellitus in young|Monogenic diabetes [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs193922327
|
Pathogenic/Likely pathogenic |
Maturity-onset diabetes of the young type 2|not provided [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900] |
|
rs199532729
|
- |
- |
|
rs199740965
|
- |
- |
|
rs200046910
|
- |
- |
|
rs200462235
|
- |
- |
|
rs201801746
|
- |
- |
|
rs2039041225
|
Pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs2039217093
|
Pathogenic/Likely pathogenic |
Glycogen storage disease, type II|not provided [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365|MedGen:C3661900] |
|
rs2096273902
|
Likely pathogenic |
not provided|Maturity onset diabetes mellitus in young|Monogenic diabetes [MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs2096280050
|
US |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs2096281827
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs2128820597
|
Pathogenic/Likely pathogenic |
Maturity-onset diabetes of the young type 2|Monogenic diabetes|not provided [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|MedGen:C3661900] |
|
rs2128821509
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs2143827215
|
Likely pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs2143857207
|
Pathogenic/Likely pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs2143871845
|
Pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs28940868
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs35501326
|
- |
- |
|
rs368438393
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs369323241
|
- |
- |
|
rs370144544
|
- |
- |
|
rs372052157
|
- |
- |
|
rs373307393
|
Pathogenic |
not provided|Glycogen storage disease, type II [MedGen:C3661900|MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs375310352
|
- |
- |
|
rs377544304
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs387907280
|
Pathogenic |
Karyomegalic interstitial nephritis [MONDO:MONDO:0013898,MedGen:C3553774,OMIM:614817,Orphanet:401996] |
|
rs398122379
|
LP/P |
Hexokinase deficiency (HK deficiency) [MIM:235700] |
|
rs398123174
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs398124208
|
Pathogenic/Likely pathogenic |
Glycogen storage disease, type V|not provided [MONDO:MONDO:0009293,MedGen:C0017924,OMIM:232600,Orphanet:368|MedGen:C3661900] |
|
rs527236146
|
Pathogenic/Likely pathogenic |
Glycogen storage disease, type V [MONDO:MONDO:0009293,MedGen:C0017924,OMIM:232600,Orphanet:368] |
|
rs539898848
|
Pathogenic/Likely pathogenic |
Glycogen storage disease, type VI [MONDO:MONDO:0009294,MedGen:C0017925,OMIM:232700,Orphanet:369] |
|
rs541141393
|
- |
- |
|
rs549029029
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs564873625
|
- |
- |
|
rs587780346
|
Pathogenic/Likely pathogenic |
Gestational diabetes|not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [Human Phenotype Ontology:HP:0009800,MONDO:MONDO:0005406,MedGen:C0085207|MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs61814453
|
- |
- |
|
rs746913146
|
Pathogenic |
not provided|Maturity onset diabetes mellitus in young|Monogenic diabetes [MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs747319728
|
- |
- |
|
rs748225017
|
- |
- |
|
rs748408705
|
- |
- |
|
rs748793710
|
- |
- |
|
rs748837763
|
- |
- |
|
rs751703979
|
LP/P |
Interstitial nephritis, karyomegalic (KMIN) [MIM:614817] |
|
rs752563477
|
- |
- |
|
rs752838004
|
- |
- |
|
rs753265856
|
- |
- |
|
rs754185312
|
- |
- |
|
rs754994587
|
- |
- |
|
rs755716626
|
- |
- |
|
rs757111744
|
- |
- |
|
rs757111744
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs758737171
|
LP/P |
Hyperinsulinemic hypoglycemia, familial, 3 (HHF3) [MIM:602485] |
|
rs761148570
|
- |
- |
|
rs762589841
|
- |
- |
|
rs763068700
|
- |
- |
|
rs763216519
|
Pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs764670084
|
- |
- |
|
rs764670084
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs764700031
|
- |
- |
|
rs764712114
|
- |
- |
|
rs765307647
|
- |
- |
|
rs767651793
|
Pathogenic |
Karyomegalic interstitial nephritis [MONDO:MONDO:0013898,MedGen:C3553774,OMIM:614817,Orphanet:401996] |
|
rs768604948
|
Pathogenic |
Glycogen storage disease, type V [MONDO:MONDO:0009293,MedGen:C0017924,OMIM:232600,Orphanet:368] |
|
rs768722066
|
- |
- |
|
rs769268803
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs769268803
|
Pathogenic |
not provided|Permanent neonatal diabetes mellitus [MedGen:C3661900|MONDO:MONDO:0100164,MedGen:C1833104,OMIM:PS606176,Orphanet:99885]; Hyperinsulinism due to glucokinase deficiency [MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299]; Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552]; Type 2 diabetes mellitus|Maturity-onset diabetes of the young type 2 [Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs770231054
|
Likely pathogenic |
Maturity onset diabetes mellitus in young [Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs770294712
|
- |
- |
|
rs770331582
|
- |
- |
|
rs771776626
|
- |
- |
|
rs772754004
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs772883420
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs773108167
|
- |
- |
|
rs773361937
|
Pathogenic |
Glycogen storage disease, type V [MONDO:MONDO:0009293,MedGen:C0017924,OMIM:232600,Orphanet:368] |
|
rs778418246
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs779222213
|
- |
- |
|
rs779804656
|
- |
- |
|
rs779828856
|
- |
- |
|
rs780246932
|
Pathogenic/Likely pathogenic |
Glycogen storage disease, type V [MONDO:MONDO:0009293,MedGen:C0017924,OMIM:232600,Orphanet:368] |
|
rs786204720
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs794727839
|
Likely pathogenic |
not provided|Maturity-onset diabetes of the young type 2|Maturity onset diabetes mellitus in young|Monogenic diabetes|not specified [MedGen:C3661900|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|MedGen:CN169374] |
|
rs796161389
|
Pathogenic/Likely pathogenic |
Glycogen storage disease, type II|not provided [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365|MedGen:C3661900] |
|
rs80356655
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs80356655
|
Pathogenic |
Maturity-onset diabetes of the young type 2|not provided|Permanent neonatal diabetes mellitus 1|Maturity onset diabetes mellitus in young|Type 2 diabetes mellitus|Hyperinsulinism due to glucokinase deficiency|Monogenic diabetes [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900|MONDO:MONDO:0100165,MedGen:C5393570,OMIM:606176|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853|MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs886042961
|
Pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
hsa00510
|
N-Glycan biosynthesis
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
DPAGT1-congenital disorder of glycosylation [MONDO:MONDO:0011964,MedGen:C2931004,OMIM:608093,Orphanet:86309] |
|
-
|
Likely pathogenic |
Congenital myasthenic syndrome 13 [MONDO:MONDO:0013883,MedGen:C3553645,OMIM:614750,Orphanet:353327,Orphanet:590] |
|
.
|
- |
- |
|
rs28934876
|
LP/P |
Congenital disorder of glycosylation 1J (CDG1J) [MIM:608093] |
|
rs369551783
|
- |
- |
|
rs387906885
|
LP/P |
Rafiq syndrome (RAFQS) [MIM:614202] |
|
rs387906886
|
LP/P |
Rafiq syndrome (RAFQS) [MIM:614202] |
|
rs387907243
|
LP/P |
Myasthenic syndrome, congenital, 13 (CMS13) [MIM:614750] |
|
rs387907243
|
Likely pathogenic |
Congenital myasthenic syndrome 13|Congenital myasthenic syndrome 13 [MONDO:MONDO:0013883,MedGen:C3553645,OMIM:614750,Orphanet:353327,Orphanet:590|MONDO:MONDO:0013883,MedGen:C3553645,OMIM:614750,Orphanet:353327,Orphanet:590]; DPAGT1-congenital disorder of glycosylation [MONDO:MONDO:0011964,MedGen:C2931004,OMIM:608093,Orphanet:86309] |
|
rs397514586
|
Pathogenic |
DPAGT1-congenital disorder of glycosylation [MONDO:MONDO:0011964,MedGen:C2931004,OMIM:608093,Orphanet:86309] |
|
rs397515329
|
Pathogenic |
DPAGT1-congenital disorder of glycosylation [MONDO:MONDO:0011964,MedGen:C2931004,OMIM:608093,Orphanet:86309] |
|
rs768416381
|
Pathogenic/Likely pathogenic |
Abnormality of metabolism/homeostasis|DPAGT1-congenital disorder of glycosylation [Human Phenotype Ontology:HP:0001939,Human Phenotype Ontology:HP:0002146,MedGen:C4021768|MONDO:MONDO:0011964,MedGen:C2931004,OMIM:608093,Orphanet:86309]; Congenital myasthenic syndrome 13 [MONDO:MONDO:0013883,MedGen:C3553645,OMIM:614750,Orphanet:353327,Orphanet:590] |
|
rs768464558
|
Likely pathogenic |
DPAGT1-congenital disorder of glycosylation [MONDO:MONDO:0011964,MedGen:C2931004,OMIM:608093,Orphanet:86309] |
|
rs768464558
|
LP/P |
Myasthenic syndrome, congenital, 13 (CMS13) [MIM:614750] |
|
rs776720609
|
Likely pathogenic |
DPAGT1-congenital disorder of glycosylation [MONDO:MONDO:0011964,MedGen:C2931004,OMIM:608093,Orphanet:86309]; Congenital myasthenic syndrome 13|DPAGT1-congenital disorder of glycosylation|Congenital myasthenic syndrome 13 [MONDO:MONDO:0013883,MedGen:C3553645,OMIM:614750,Orphanet:353327,Orphanet:590|MONDO:MONDO:0011964,MedGen:C2931004,OMIM:608093,Orphanet:86309|MONDO:MONDO:0013883,MedGen:C3553645,OMIM:614750,Orphanet:353327,Orphanet:590] |
|
rs863225088
|
Pathogenic |
DPAGT1-congenital disorder of glycosylation|Congenital disorder of glycosylation [MONDO:MONDO:0011964,MedGen:C2931004,OMIM:608093,Orphanet:86309|MONDO:MONDO:0015286,MedGen:C0282577,Orphanet:137] |
hsa00513
|
Various types of N-glycan biosynthesis
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
GM2-gangliosidosis 1 (GM2G1) [MIM:272800] |
|
-
|
Pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
.
|
- |
- |
|
rs1046611742
|
US |
A sporadic cancer |
|
rs1054374
|
LB/B |
- |
|
rs1131691007
|
US |
Sporadic cancers |
|
rs121907964
|
Pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
rs1282031681
|
Likely pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
rs1453167097
|
US |
Sporadic cancers |
|
rs1555526214
|
US |
Sporadic cancers |
|
rs1555526226
|
US |
Sporadic cancers |
|
rs1595802191
|
Pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
rs1749652247
|
Likely pathogenic |
Sandhoff disease [MONDO:MONDO:0010006,MedGen:C0036161,OMIM:268800,Orphanet:796] |
|
rs199578185
|
LP/P |
GM2-gangliosidosis 1 (GM2G1) [MIM:272800] |
|
rs2088732981
|
Likely pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
rs2089059318
|
Likely pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
rs369551783
|
- |
- |
|
rs387906885
|
LP/P |
Rafiq syndrome (RAFQS) [MIM:614202] |
|
rs387906886
|
LP/P |
Rafiq syndrome (RAFQS) [MIM:614202] |
|
rs748190164
|
US |
GM2-gangliosidosis 1 (GM2G1) [MIM:272800] |
|
rs751393950
|
Pathogenic/Likely pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
rs763475083
|
- |
- |
|
rs769814524
|
- |
- |
|
rs772132346
|
- |
- |
|
rs786203064
|
US |
Sporadic cancers |
hsa00520
|
Amino sugar and nucleotide sugar metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
-
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
-
|
LP/P |
Galactosemia 2 (GALAC2) [MIM:230200] |
|
-
|
Pathogenic |
Deficiency of galactokinase [MONDO:MONDO:0009255,MedGen:C0268155,OMIM:230200,Orphanet:352,Orphanet:79237] |
|
-
|
Pathogenic |
not provided|Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase [MedGen:C3661900|MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239] |
|
-
|
Likely pathogenic |
Deficiency of cytochrome-b5 reductase [MONDO:MONDO:0009606,MedGen:C0268193,OMIM:250800,Orphanet:621] |
|
-
|
Pathogenic |
Sialuria [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166]; GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602] |
|
-
|
LP/P |
GM2-gangliosidosis 1 (GM2G1) [MIM:272800] |
|
-
|
Pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
-
|
LP/P |
Nonaka myopathy (NM) [MIM:605820] |
|
-
|
LP/P |
Diabetes mellitus, permanent neonatal, 1 (PNDM1) [MIM:606176] |
|
-
|
Likely pathogenic |
Maturity onset diabetes mellitus in young [Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
-
|
LP/P |
Myasthenic syndrome, congenital, 12 (CMS12) [MIM:610542] |
|
-
|
LP/P |
Congenital disorder of glycosylation 1T (CDG1T) [MIM:614921] |
|
-
|
LP/P |
Developmental and epileptic encephalopathy 84 (DEE84) [MIM:618792] |
|
-
|
Likely pathogenic |
Galactosemia [Human Phenotype Ontology:HP:0004919,MONDO:MONDO:0018116,MedGen:C0016952,OMIM:PS230400,Orphanet:352] |
|
.
|
- |
- |
|
rs1046611742
|
US |
A sporadic cancer |
|
rs104894009
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs104894577
|
Pathogenic |
Deficiency of galactokinase [MONDO:MONDO:0009255,MedGen:C0268155,OMIM:230200,Orphanet:352,Orphanet:79237] |
|
rs1054374
|
LB/B |
- |
|
rs1057516374
|
Pathogenic/Likely pathogenic |
GNE myopathy|GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602|MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602]; Sialuria|not provided [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166|MedGen:C3661900] |
|
rs1057516746
|
Pathogenic/Likely pathogenic |
GNE myopathy|GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602|MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602]; Sialuria [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166] |
|
rs1057516906
|
Pathogenic/Likely pathogenic |
GNE myopathy|GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602|MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602]; Sialuria|not provided [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166|MedGen:C3661900] |
|
rs1064794848
|
LP/P |
Neurodevelopmental disorder with visual defects and brain anomalies (NEDVIBA) [MIM:618547] |
|
rs1064794848
|
Pathogenic/Likely pathogenic |
not provided|Neurodevelopmental disorder with visual defects and brain anomalies|Retinitis pigmentosa|Inborn genetic diseases|Hemolytic anemia due to hexokinase deficiency|Retinitis pigmentosa 79|Autism spectrum disorder [MedGen:C3661900|MONDO:MONDO:0032807,MedGen:C5231404,OMIM:618547|Human Phenotype Ontology:HP:0000547,MONDO:MONDO:0019200,MeSH:D012174,MedGen:C0035334,OMIM:268000,OMIM:PS268000,Orphanet:791|MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0009340,MedGen:C3150343,OMIM:235700,Orphanet:90031|MONDO:MONDO:0044320,MedGen:C4479526,OMIM:617460|MONDO:MONDO:0005258,MeSH:D000067877,MedGen:C1510586,Orphanet:106] |
|
rs1064795154
|
LP/P |
Neurodevelopmental disorder with visual defects and brain anomalies (NEDVIBA) [MIM:618547] |
|
rs111033648
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033652
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033669
|
- |
- |
|
rs111033669
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033715
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033715
|
Pathogenic/Likely pathogenic |
Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase|not provided|Galactosemia [MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239|MedGen:C3661900|Human Phenotype Ontology:HP:0004919,MONDO:MONDO:0018116,MedGen:C0016952,OMIM:PS230400,Orphanet:352] |
|
rs111033720
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033725
|
Pathogenic |
Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase|not provided [MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239|MedGen:C3661900] |
|
rs111033800
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033800
|
Pathogenic/Likely pathogenic |
Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase|not provided|Galactosemia [MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239|MedGen:C3661900|Human Phenotype Ontology:HP:0004919,MONDO:MONDO:0018116,MedGen:C0016952,OMIM:PS230400,Orphanet:352] |
|
rs111033802
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033802
|
Pathogenic/Likely pathogenic |
Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase|Galactosemia [MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239|Human Phenotype Ontology:HP:0004919,MONDO:MONDO:0018116,MedGen:C0016952,OMIM:PS230400,Orphanet:352] |
|
rs111033806
|
Pathogenic |
Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase [MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239] |
|
rs111033808
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033808
|
Pathogenic/Likely pathogenic |
Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase|not provided|Galactosemia [MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239|MedGen:C3661900|Human Phenotype Ontology:HP:0004919,MONDO:MONDO:0018116,MedGen:C0016952,OMIM:PS230400,Orphanet:352] |
|
rs111033809
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033810
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033811
|
Pathogenic/Likely pathogenic |
Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase|not provided|Galactosemia [MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239|MedGen:C3661900|Human Phenotype Ontology:HP:0004919,MONDO:MONDO:0018116,MedGen:C0016952,OMIM:PS230400,Orphanet:352] |
|
rs111033812
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033814
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033815
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033828
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033832
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs1131691007
|
US |
Sporadic cancers |
|
rs1131691416
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1131691416
|
Pathogenic/Likely pathogenic |
not provided|Maturity-onset diabetes of the young type 2|Type 2 diabetes mellitus [MedGen:C3661900|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853]; Hyperinsulinism due to glucokinase deficiency [MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299]; Permanent neonatal diabetes mellitus 1 [MONDO:MONDO:0100165,MedGen:C5393570,OMIM:606176]; Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs1166093458
|
- |
- |
|
rs1193356896
|
- |
- |
|
rs1212623980
|
Pathogenic/Likely pathogenic |
GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602] |
|
rs121907964
|
Pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
rs121908047
|
LP/P |
Galactosemia 3 (GALAC3) [MIM:230350] |
|
rs121908628
|
Pathogenic |
GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602] |
|
rs121908633
|
LP/P |
Nonaka myopathy (NM) [MIM:605820] |
|
rs121913549
|
Pathogenic |
Familial visceral amyloidosis, Ostertag type [MONDO:MONDO:0007099,MedGen:C0268389,OMIM:105200,Orphanet:85450] |
|
rs1220386463
|
US |
A colorectal cancer sample |
|
rs1236647498
|
Pathogenic/Likely pathogenic |
GNE myopathy|GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602|MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602]; Sialuria|not provided [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166|MedGen:C3661900] |
|
rs1282031681
|
Likely pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
rs1286804191
|
LP/P |
Diabetes mellitus, permanent neonatal, 1 (PNDM1) [MIM:606176] |
|
rs1301021797
|
LP/P |
Congenital disorder of glycosylation 1T (CDG1T) [MIM:614921] |
|
rs1320810473
|
LP/P |
Congenital disorder of glycosylation 1T (CDG1T) [MIM:614921] |
|
rs1332966015
|
Pathogenic |
not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1360415315
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1360415315
|
Pathogenic |
not provided|Maturity-onset diabetes of the young type 2|Hyperinsulinism due to glucokinase deficiency [MedGen:C3661900|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299]; Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552]; Permanent neonatal diabetes mellitus [MONDO:MONDO:0100164,MedGen:C1833104,OMIM:PS606176,Orphanet:99885]; Type 2 diabetes mellitus|Maturity onset diabetes mellitus in young|Monogenic diabetes [Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs1375656631
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs137853582
|
- |
- |
|
rs137853860
|
- |
- |
|
rs137853860
|
LP/P |
Galactosemia 3 (GALAC3) [MIM:230350] |
|
rs137853861
|
- |
- |
|
rs137853861
|
LP/P |
Galactosemia 3 (GALAC3) [MIM:230350] |
|
rs139620518
|
- |
- |
|
rs139998516
|
- |
- |
|
rs140641547
|
- |
- |
|
rs141315355
|
- |
- |
|
rs143026820
|
- |
- |
|
rs144071404
|
Pathogenic/Likely pathogenic |
Hereditary methemoglobinemia|not provided|Deficiency of cytochrome-b5 reductase [MONDO:MONDO:0018963,MedGen:C0272087,Orphanet:621|MedGen:C3661900|MONDO:MONDO:0009606,MedGen:C0268193,OMIM:250800,Orphanet:621] |
|
rs1441649062
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs144723656
|
Pathogenic |
Maturity-onset diabetes of the young type 2|not provided [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:CN517202] |
|
rs144723656
|
Pathogenic/Likely pathogenic |
not provided|Maturity onset diabetes mellitus in young [MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs144993986
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase [MedGen:C3661900|MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239] |
|
rs1453167097
|
US |
Sporadic cancers |
|
rs1455785164
|
LP/P |
Nonaka myopathy (NM) [MIM:605820] |
|
rs1470521850
|
Pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs1476637197
|
Pathogenic |
Maturity-onset diabetes of the young type 2|Monogenic diabetes [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs148311934
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs148311934
|
Pathogenic |
Maturity-onset diabetes of the young type 2|not provided|Maturity onset diabetes mellitus in young|Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552]; Type 2 diabetes mellitus [Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853]; Hyperinsulinism due to glucokinase deficiency [MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299]; Permanent neonatal diabetes mellitus 1|Monogenic diabetes [MONDO:MONDO:0100165,MedGen:C5393570,OMIM:606176|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs1490487177
|
- |
- |
|
rs150279875
|
- |
- |
|
rs150694299
|
- |
- |
|
rs1554334872
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2|Maturity onset diabetes mellitus in young [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1554334905
|
Likely pathogenic |
not specified|not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [MedGen:CN169374|MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1554335132
|
Pathogenic |
not specified|Maturity onset diabetes mellitus in young|Monogenic diabetes [MedGen:CN169374|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs1554335135
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1554335135
|
Pathogenic/Likely pathogenic |
not provided|Maturity onset diabetes mellitus in young [MedGen:CN517202|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1554335761
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1554658910
|
LP/P |
Nonaka myopathy (NM) [MIM:605820] |
|
rs1554658955
|
Pathogenic |
Sialuria [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166]; GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602] |
|
rs1554664064
|
Pathogenic |
Sialuria [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166]; GNE myopathy|GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602|MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602] |
|
rs1554664064
|
LP/P |
Nonaka myopathy (NM) [MIM:605820] |
|
rs1555526214
|
US |
Sporadic cancers |
|
rs1555526226
|
US |
Sporadic cancers |
|
rs1555748630
|
- |
- |
|
rs1555748926
|
LP/P |
Galactosemia 2 (GALAC2) [MIM:230200] |
|
rs1558749457
|
Pathogenic |
Congenital myasthenic syndrome 12 [MONDO:MONDO:0012518,MedGen:C3552335,OMIM:610542,Orphanet:353327,Orphanet:590] |
|
rs1562711915
|
Pathogenic |
not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1562715426
|
Pathogenic |
not provided|Maturity onset diabetes mellitus in young [MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1562717053
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1562717053
|
Pathogenic |
not provided|Maturity-onset diabetes of the young type 2 [MedGen:C3661900|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552]; Permanent neonatal diabetes mellitus 1 [MONDO:MONDO:0100165,MedGen:C5393570,OMIM:606176]; Type 2 diabetes mellitus [Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853]; Hyperinsulinism due to glucokinase deficiency|Monogenic diabetes|Maturity onset diabetes mellitus in young [MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1563938450
|
- |
- |
|
rs1564100957
|
Likely pathogenic |
not provided|Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase [MedGen:C3661900|MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239] |
|
rs1564557037
|
LP/P |
Neurodevelopmental disorder with visual defects and brain anomalies (NEDVIBA) [MIM:618547] |
|
rs1564557037
|
Likely pathogenic |
Neurodevelopmental disorder with visual defects and brain anomalies|Neurodevelopmental abnormality|Charcot-Marie-Tooth disease type 4G [MONDO:MONDO:0032807,MedGen:C5231404,OMIM:618547|Human Phenotype Ontology:HP:0012759,MedGen:C4022737|MONDO:MONDO:0011534,MedGen:C1854449,OMIM:605285,Orphanet:99953] |
|
rs1583591303
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1583599303
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1583599303
|
Pathogenic/Likely pathogenic/Likely risk allele |
not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1595802191
|
Pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
rs1749652247
|
Likely pathogenic |
Sandhoff disease [MONDO:MONDO:0010006,MedGen:C0036161,OMIM:268800,Orphanet:796] |
|
rs190292776
|
- |
- |
|
rs192453247
|
- |
- |
|
rs193922272
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs193922281
|
Pathogenic/Likely pathogenic |
Maturity-onset diabetes of the young type 2|not provided|Maturity onset diabetes mellitus in young [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs193922282
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs193922282
|
LP/P |
Diabetes mellitus, permanent neonatal, 1 (PNDM1) [MIM:606176] |
|
rs193922290
|
Likely pathogenic/Likely risk allele |
Maturity-onset diabetes of the young type 2|Maturity onset diabetes mellitus in young [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs193922297
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs193922303
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs193922311
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs193922319
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2|Maturity onset diabetes mellitus in young|Monogenic diabetes [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs193922327
|
Pathogenic/Likely pathogenic |
Maturity-onset diabetes of the young type 2|not provided [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900] |
|
rs199578185
|
LP/P |
GM2-gangliosidosis 1 (GM2G1) [MIM:272800] |
|
rs199878471
|
- |
- |
|
rs200630872
|
- |
- |
|
rs201894374
|
US |
Developmental and epileptic encephalopathy 84 (DEE84) [MIM:618792] |
|
rs2061598873
|
Likely pathogenic |
Deficiency of galactokinase [MONDO:MONDO:0009255,MedGen:C0268155,OMIM:230200,Orphanet:352,Orphanet:79237] |
|
rs2088732981
|
Likely pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
rs2089059318
|
Likely pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
rs2096273902
|
Likely pathogenic |
not provided|Maturity onset diabetes mellitus in young|Monogenic diabetes [MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs2096278847
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs2096280050
|
US |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs2096281827
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs2128820597
|
Pathogenic/Likely pathogenic |
Maturity-onset diabetes of the young type 2|Monogenic diabetes|not provided [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|MedGen:C3661900] |
|
rs2128821509
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs2132341560
|
Likely pathogenic |
Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase [MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239] |
|
rs2133006228
|
Pathogenic |
Sialuria [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166]; GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602] |
|
rs2297950
|
LB/B |
- |
|
rs367543259
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs369608407
|
Pathogenic/Likely pathogenic |
Epileptic encephalopathy|Developmental and epileptic encephalopathy, 84 [Human Phenotype Ontology:HP:0200134,MedGen:C0543888|MONDO:MONDO:0032918,MedGen:C5394081,OMIM:618792] |
|
rs369714039
|
- |
- |
|
rs371050975
|
- |
- |
|
rs371517491
|
- |
- |
|
rs371517491
|
Pathogenic/Likely pathogenic |
Deficiency of galactokinase [MONDO:MONDO:0009255,MedGen:C0268155,OMIM:230200,Orphanet:352,Orphanet:79237] |
|
rs371918677
|
- |
- |
|
rs375690568
|
LP/P |
Galactosemia 2 (GALAC2) [MIM:230200] |
|
rs387906535
|
Pathogenic |
Familial visceral amyloidosis, Ostertag type [MONDO:MONDO:0007099,MedGen:C0268389,OMIM:105200,Orphanet:85450] |
|
rs387906536
|
Pathogenic |
Familial visceral amyloidosis, Ostertag type|not provided [MONDO:MONDO:0007099,MedGen:C0268389,OMIM:105200,Orphanet:85450|MedGen:C3661900] |
|
rs397518462
|
LP/P |
Alacrima, achalasia, and impaired intellectual development syndrome (AAMR) [MIM:615510] |
|
rs398122379
|
LP/P |
Hexokinase deficiency (HK deficiency) [MIM:235700] |
|
rs398123182
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase [MedGen:C3661900|MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239] |
|
rs527497633
|
- |
- |
|
rs533469192
|
- |
- |
|
rs560847516
|
- |
- |
|
rs587780346
|
Pathogenic/Likely pathogenic |
Gestational diabetes|not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [Human Phenotype Ontology:HP:0009800,MONDO:MONDO:0005406,MedGen:C0085207|MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs727503942
|
- |
- |
|
rs746913146
|
Pathogenic |
not provided|Maturity onset diabetes mellitus in young|Monogenic diabetes [MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs747199032
|
- |
- |
|
rs747199032
|
Pathogenic |
GNE myopathy|GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602|MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602]; Sialuria|not provided [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166|MedGen:C3661900] |
|
rs748190164
|
US |
GM2-gangliosidosis 1 (GM2G1) [MIM:272800] |
|
rs748408705
|
- |
- |
|
rs749145675
|
- |
- |
|
rs750714549
|
- |
- |
|
rs750765230
|
- |
- |
|
rs751393950
|
Pathogenic/Likely pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
rs751395832
|
- |
- |
|
rs751571666
|
- |
- |
|
rs753866967
|
LP/P |
Myasthenic syndrome, congenital, 12 (CMS12) [MIM:610542] |
|
rs75391579
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs754052886
|
- |
- |
|
rs754185312
|
- |
- |
|
rs754967473
|
- |
- |
|
rs754967473
|
LP/P |
Galactosemia 2 (GALAC2) [MIM:230200] |
|
rs754994587
|
- |
- |
|
rs755334338
|
- |
- |
|
rs757091387
|
Pathogenic/Likely pathogenic |
GNE myopathy|not provided|GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602|MedGen:C3661900|MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602]; Sialuria [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166] |
|
rs757925234
|
- |
- |
|
rs758737171
|
LP/P |
Hyperinsulinemic hypoglycemia, familial, 3 (HHF3) [MIM:602485] |
|
rs758814313
|
Likely pathogenic |
GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602] |
|
rs760068551
|
- |
- |
|
rs761714818
|
LP/P |
Muscular dystrophy-dystroglycanopathy limb-girdle C14 (MDDGC14) [MIM:615352] |
|
rs763475083
|
- |
- |
|
rs765326176
|
- |
- |
|
rs765710455
|
- |
- |
|
rs769268803
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs769268803
|
Pathogenic |
not provided|Permanent neonatal diabetes mellitus [MedGen:C3661900|MONDO:MONDO:0100164,MedGen:C1833104,OMIM:PS606176,Orphanet:99885]; Hyperinsulinism due to glucokinase deficiency [MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299]; Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552]; Type 2 diabetes mellitus|Maturity-onset diabetes of the young type 2 [Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs769814524
|
- |
- |
|
rs770231054
|
Likely pathogenic |
Maturity onset diabetes mellitus in young [Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs772016638
|
- |
- |
|
rs772132346
|
- |
- |
|
rs772754004
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs773416476
|
LB/B |
- |
|
rs774169158
|
- |
- |
|
rs776407980
|
- |
- |
|
rs779694939
|
LP/P |
Nonaka myopathy (NM) [MIM:605820] |
|
rs779694939
|
Pathogenic/Likely pathogenic |
GNE myopathy|not provided|GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602|MedGen:C3661900|MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602]; Sialuria [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166] |
|
rs779828856
|
- |
- |
|
rs786203064
|
US |
Sporadic cancers |
|
rs786204558
|
Pathogenic/Likely pathogenic |
GNE myopathy|Sialuria [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602|MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166]; GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602] |
|
rs794727839
|
Likely pathogenic |
not provided|Maturity-onset diabetes of the young type 2|Maturity onset diabetes mellitus in young|Monogenic diabetes|not specified [MedGen:C3661900|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|MedGen:CN169374] |
|
rs80356655
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs80356655
|
Pathogenic |
Maturity-onset diabetes of the young type 2|not provided|Permanent neonatal diabetes mellitus 1|Maturity onset diabetes mellitus in young|Type 2 diabetes mellitus|Hyperinsulinism due to glucokinase deficiency|Monogenic diabetes [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900|MONDO:MONDO:0100165,MedGen:C5393570,OMIM:606176|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853|MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs886042088
|
Pathogenic |
Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase [MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239] |
|
rs886042097
|
Likely pathogenic |
not provided|Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase [MedGen:C3661900|MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239] |
|
rs886043979
|
LP/P |
Nonaka myopathy (NM) [MIM:605820] |
|
rs915070690
|
Likely pathogenic |
Deficiency of galactokinase [MONDO:MONDO:0009255,MedGen:C0268155,OMIM:230200,Orphanet:352,Orphanet:79237] |
|
rs981970282
|
- |
- |
rn00521
|
Streptomycin biosynthesis
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
-
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
-
|
LP/P |
Diabetes mellitus, permanent neonatal, 1 (PNDM1) [MIM:606176] |
|
-
|
Likely pathogenic |
Maturity onset diabetes mellitus in young [Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
-
|
LP/P |
Congenital disorder of glycosylation 1T (CDG1T) [MIM:614921] |
|
.
|
- |
- |
|
rs104894009
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs104894015
|
LP/P |
Hyperinsulinemic hypoglycemia, familial, 3 (HHF3) [MIM:602485] |
|
rs1064794848
|
LP/P |
Neurodevelopmental disorder with visual defects and brain anomalies (NEDVIBA) [MIM:618547] |
|
rs1064794848
|
Pathogenic/Likely pathogenic |
not provided|Neurodevelopmental disorder with visual defects and brain anomalies|Retinitis pigmentosa|Inborn genetic diseases|Hemolytic anemia due to hexokinase deficiency|Retinitis pigmentosa 79|Autism spectrum disorder [MedGen:C3661900|MONDO:MONDO:0032807,MedGen:C5231404,OMIM:618547|Human Phenotype Ontology:HP:0000547,MONDO:MONDO:0019200,MeSH:D012174,MedGen:C0035334,OMIM:268000,OMIM:PS268000,Orphanet:791|MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0009340,MedGen:C3150343,OMIM:235700,Orphanet:90031|MONDO:MONDO:0044320,MedGen:C4479526,OMIM:617460|MONDO:MONDO:0005258,MeSH:D000067877,MedGen:C1510586,Orphanet:106] |
|
rs1064795154
|
LP/P |
Neurodevelopmental disorder with visual defects and brain anomalies (NEDVIBA) [MIM:618547] |
|
rs1131691416
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1131691416
|
Pathogenic/Likely pathogenic |
not provided|Maturity-onset diabetes of the young type 2|Type 2 diabetes mellitus [MedGen:C3661900|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853]; Hyperinsulinism due to glucokinase deficiency [MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299]; Permanent neonatal diabetes mellitus 1 [MONDO:MONDO:0100165,MedGen:C5393570,OMIM:606176]; Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs1286804191
|
LP/P |
Diabetes mellitus, permanent neonatal, 1 (PNDM1) [MIM:606176] |
|
rs1301021797
|
LP/P |
Congenital disorder of glycosylation 1T (CDG1T) [MIM:614921] |
|
rs1320810473
|
LP/P |
Congenital disorder of glycosylation 1T (CDG1T) [MIM:614921] |
|
rs1332966015
|
Pathogenic |
not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1360415315
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1360415315
|
Pathogenic |
not provided|Maturity-onset diabetes of the young type 2|Hyperinsulinism due to glucokinase deficiency [MedGen:C3661900|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299]; Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552]; Permanent neonatal diabetes mellitus [MONDO:MONDO:0100164,MedGen:C1833104,OMIM:PS606176,Orphanet:99885]; Type 2 diabetes mellitus|Maturity onset diabetes mellitus in young|Monogenic diabetes [Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs1375656631
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs141315355
|
- |
- |
|
rs1441649062
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs144723656
|
Pathogenic |
Maturity-onset diabetes of the young type 2|not provided [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:CN517202] |
|
rs144723656
|
Pathogenic/Likely pathogenic |
not provided|Maturity onset diabetes mellitus in young [MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1454273149
|
- |
- |
|
rs146153216
|
- |
- |
|
rs1470521850
|
Pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs147065275
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1476637197
|
Pathogenic |
Maturity-onset diabetes of the young type 2|Monogenic diabetes [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs148311934
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs148311934
|
Pathogenic |
Maturity-onset diabetes of the young type 2|not provided|Maturity onset diabetes mellitus in young|Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552]; Type 2 diabetes mellitus [Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853]; Hyperinsulinism due to glucokinase deficiency [MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299]; Permanent neonatal diabetes mellitus 1|Monogenic diabetes [MONDO:MONDO:0100165,MedGen:C5393570,OMIM:606176|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs148563375
|
- |
- |
|
rs1490487177
|
- |
- |
|
rs1554334872
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2|Maturity onset diabetes mellitus in young [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1554334905
|
Likely pathogenic |
not specified|not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [MedGen:CN169374|MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1554335132
|
Pathogenic |
not specified|Maturity onset diabetes mellitus in young|Monogenic diabetes [MedGen:CN169374|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs1554335135
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1554335135
|
Pathogenic/Likely pathogenic |
not provided|Maturity onset diabetes mellitus in young [MedGen:CN517202|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1554335761
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1562711915
|
Pathogenic |
not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1562715426
|
Pathogenic |
not provided|Maturity onset diabetes mellitus in young [MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1562717053
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1562717053
|
Pathogenic |
not provided|Maturity-onset diabetes of the young type 2 [MedGen:C3661900|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552]; Permanent neonatal diabetes mellitus 1 [MONDO:MONDO:0100165,MedGen:C5393570,OMIM:606176]; Type 2 diabetes mellitus [Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853]; Hyperinsulinism due to glucokinase deficiency|Monogenic diabetes|Maturity onset diabetes mellitus in young [MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1564557037
|
LP/P |
Neurodevelopmental disorder with visual defects and brain anomalies (NEDVIBA) [MIM:618547] |
|
rs1564557037
|
Likely pathogenic |
Neurodevelopmental disorder with visual defects and brain anomalies|Neurodevelopmental abnormality|Charcot-Marie-Tooth disease type 4G [MONDO:MONDO:0032807,MedGen:C5231404,OMIM:618547|Human Phenotype Ontology:HP:0012759,MedGen:C4022737|MONDO:MONDO:0011534,MedGen:C1854449,OMIM:605285,Orphanet:99953] |
|
rs1583591303
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1583599303
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1583599303
|
Pathogenic/Likely pathogenic/Likely risk allele |
not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs17856552
|
- |
- |
|
rs193922272
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs193922281
|
Pathogenic/Likely pathogenic |
Maturity-onset diabetes of the young type 2|not provided|Maturity onset diabetes mellitus in young [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs193922282
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs193922282
|
LP/P |
Diabetes mellitus, permanent neonatal, 1 (PNDM1) [MIM:606176] |
|
rs193922290
|
Likely pathogenic/Likely risk allele |
Maturity-onset diabetes of the young type 2|Maturity onset diabetes mellitus in young [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs193922297
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs193922311
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs193922319
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2|Maturity onset diabetes mellitus in young|Monogenic diabetes [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs193922327
|
Pathogenic/Likely pathogenic |
Maturity-onset diabetes of the young type 2|not provided [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900] |
|
rs2096273902
|
Likely pathogenic |
not provided|Maturity onset diabetes mellitus in young|Monogenic diabetes [MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs2096280050
|
US |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs2096281827
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs2128820597
|
Pathogenic/Likely pathogenic |
Maturity-onset diabetes of the young type 2|Monogenic diabetes|not provided [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|MedGen:C3661900] |
|
rs2128821509
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs398122379
|
LP/P |
Hexokinase deficiency (HK deficiency) [MIM:235700] |
|
rs587780346
|
Pathogenic/Likely pathogenic |
Gestational diabetes|not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [Human Phenotype Ontology:HP:0009800,MONDO:MONDO:0005406,MedGen:C0085207|MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs746913146
|
Pathogenic |
not provided|Maturity onset diabetes mellitus in young|Monogenic diabetes [MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs754185312
|
- |
- |
|
rs754994587
|
- |
- |
|
rs758737171
|
LP/P |
Hyperinsulinemic hypoglycemia, familial, 3 (HHF3) [MIM:602485] |
|
rs769268803
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs769268803
|
Pathogenic |
not provided|Permanent neonatal diabetes mellitus [MedGen:C3661900|MONDO:MONDO:0100164,MedGen:C1833104,OMIM:PS606176,Orphanet:99885]; Hyperinsulinism due to glucokinase deficiency [MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299]; Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552]; Type 2 diabetes mellitus|Maturity-onset diabetes of the young type 2 [Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs770231054
|
Likely pathogenic |
Maturity onset diabetes mellitus in young [Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs770331582
|
- |
- |
|
rs772754004
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs779828856
|
- |
- |
|
rs794727839
|
Likely pathogenic |
not provided|Maturity-onset diabetes of the young type 2|Maturity onset diabetes mellitus in young|Monogenic diabetes|not specified [MedGen:C3661900|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|MedGen:CN169374] |
|
rs80356655
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs80356655
|
Pathogenic |
Maturity-onset diabetes of the young type 2|not provided|Permanent neonatal diabetes mellitus 1|Maturity onset diabetes mellitus in young|Type 2 diabetes mellitus|Hyperinsulinism due to glucokinase deficiency|Monogenic diabetes [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900|MONDO:MONDO:0100165,MedGen:C5393570,OMIM:606176|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853|MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
hsa00524
|
Neomycin, kanamycin and gentamicin biosynthesis
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
-
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
-
|
LP/P |
Diabetes mellitus, permanent neonatal, 1 (PNDM1) [MIM:606176] |
|
-
|
Likely pathogenic |
Maturity onset diabetes mellitus in young [Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
.
|
- |
- |
|
rs104894009
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs104894015
|
LP/P |
Hyperinsulinemic hypoglycemia, familial, 3 (HHF3) [MIM:602485] |
|
rs1064794848
|
LP/P |
Neurodevelopmental disorder with visual defects and brain anomalies (NEDVIBA) [MIM:618547] |
|
rs1064794848
|
Pathogenic/Likely pathogenic |
not provided|Neurodevelopmental disorder with visual defects and brain anomalies|Retinitis pigmentosa|Inborn genetic diseases|Hemolytic anemia due to hexokinase deficiency|Retinitis pigmentosa 79|Autism spectrum disorder [MedGen:C3661900|MONDO:MONDO:0032807,MedGen:C5231404,OMIM:618547|Human Phenotype Ontology:HP:0000547,MONDO:MONDO:0019200,MeSH:D012174,MedGen:C0035334,OMIM:268000,OMIM:PS268000,Orphanet:791|MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0009340,MedGen:C3150343,OMIM:235700,Orphanet:90031|MONDO:MONDO:0044320,MedGen:C4479526,OMIM:617460|MONDO:MONDO:0005258,MeSH:D000067877,MedGen:C1510586,Orphanet:106] |
|
rs1064795154
|
LP/P |
Neurodevelopmental disorder with visual defects and brain anomalies (NEDVIBA) [MIM:618547] |
|
rs1131691416
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1131691416
|
Pathogenic/Likely pathogenic |
not provided|Maturity-onset diabetes of the young type 2|Type 2 diabetes mellitus [MedGen:C3661900|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853]; Hyperinsulinism due to glucokinase deficiency [MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299]; Permanent neonatal diabetes mellitus 1 [MONDO:MONDO:0100165,MedGen:C5393570,OMIM:606176]; Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs1286804191
|
LP/P |
Diabetes mellitus, permanent neonatal, 1 (PNDM1) [MIM:606176] |
|
rs1332966015
|
Pathogenic |
not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1360415315
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1360415315
|
Pathogenic |
not provided|Maturity-onset diabetes of the young type 2|Hyperinsulinism due to glucokinase deficiency [MedGen:C3661900|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299]; Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552]; Permanent neonatal diabetes mellitus [MONDO:MONDO:0100164,MedGen:C1833104,OMIM:PS606176,Orphanet:99885]; Type 2 diabetes mellitus|Maturity onset diabetes mellitus in young|Monogenic diabetes [Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs1375656631
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs141315355
|
- |
- |
|
rs1441649062
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs144723656
|
Pathogenic |
Maturity-onset diabetes of the young type 2|not provided [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:CN517202] |
|
rs144723656
|
Pathogenic/Likely pathogenic |
not provided|Maturity onset diabetes mellitus in young [MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs146153216
|
- |
- |
|
rs1470521850
|
Pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs147065275
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1476637197
|
Pathogenic |
Maturity-onset diabetes of the young type 2|Monogenic diabetes [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs148311934
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs148311934
|
Pathogenic |
Maturity-onset diabetes of the young type 2|not provided|Maturity onset diabetes mellitus in young|Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552]; Type 2 diabetes mellitus [Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853]; Hyperinsulinism due to glucokinase deficiency [MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299]; Permanent neonatal diabetes mellitus 1|Monogenic diabetes [MONDO:MONDO:0100165,MedGen:C5393570,OMIM:606176|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs1490487177
|
- |
- |
|
rs1554334872
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2|Maturity onset diabetes mellitus in young [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1554334905
|
Likely pathogenic |
not specified|not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [MedGen:CN169374|MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1554335132
|
Pathogenic |
not specified|Maturity onset diabetes mellitus in young|Monogenic diabetes [MedGen:CN169374|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs1554335135
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1554335135
|
Pathogenic/Likely pathogenic |
not provided|Maturity onset diabetes mellitus in young [MedGen:CN517202|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1554335761
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1562711915
|
Pathogenic |
not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1562715426
|
Pathogenic |
not provided|Maturity onset diabetes mellitus in young [MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1562717053
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1562717053
|
Pathogenic |
not provided|Maturity-onset diabetes of the young type 2 [MedGen:C3661900|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552]; Permanent neonatal diabetes mellitus 1 [MONDO:MONDO:0100165,MedGen:C5393570,OMIM:606176]; Type 2 diabetes mellitus [Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853]; Hyperinsulinism due to glucokinase deficiency|Monogenic diabetes|Maturity onset diabetes mellitus in young [MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1564557037
|
LP/P |
Neurodevelopmental disorder with visual defects and brain anomalies (NEDVIBA) [MIM:618547] |
|
rs1564557037
|
Likely pathogenic |
Neurodevelopmental disorder with visual defects and brain anomalies|Neurodevelopmental abnormality|Charcot-Marie-Tooth disease type 4G [MONDO:MONDO:0032807,MedGen:C5231404,OMIM:618547|Human Phenotype Ontology:HP:0012759,MedGen:C4022737|MONDO:MONDO:0011534,MedGen:C1854449,OMIM:605285,Orphanet:99953] |
|
rs1583591303
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1583599303
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1583599303
|
Pathogenic/Likely pathogenic/Likely risk allele |
not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs193922272
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs193922281
|
Pathogenic/Likely pathogenic |
Maturity-onset diabetes of the young type 2|not provided|Maturity onset diabetes mellitus in young [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs193922282
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs193922282
|
LP/P |
Diabetes mellitus, permanent neonatal, 1 (PNDM1) [MIM:606176] |
|
rs193922290
|
Likely pathogenic/Likely risk allele |
Maturity-onset diabetes of the young type 2|Maturity onset diabetes mellitus in young [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs193922297
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs193922311
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs193922319
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2|Maturity onset diabetes mellitus in young|Monogenic diabetes [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs193922327
|
Pathogenic/Likely pathogenic |
Maturity-onset diabetes of the young type 2|not provided [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900] |
|
rs2096273902
|
Likely pathogenic |
not provided|Maturity onset diabetes mellitus in young|Monogenic diabetes [MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs2096280050
|
US |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs2096281827
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs2128820597
|
Pathogenic/Likely pathogenic |
Maturity-onset diabetes of the young type 2|Monogenic diabetes|not provided [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|MedGen:C3661900] |
|
rs2128821509
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs398122379
|
LP/P |
Hexokinase deficiency (HK deficiency) [MIM:235700] |
|
rs587780346
|
Pathogenic/Likely pathogenic |
Gestational diabetes|not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [Human Phenotype Ontology:HP:0009800,MONDO:MONDO:0005406,MedGen:C0085207|MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs746913146
|
Pathogenic |
not provided|Maturity onset diabetes mellitus in young|Monogenic diabetes [MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs754185312
|
- |
- |
|
rs754994587
|
- |
- |
|
rs758737171
|
LP/P |
Hyperinsulinemic hypoglycemia, familial, 3 (HHF3) [MIM:602485] |
|
rs769268803
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs769268803
|
Pathogenic |
not provided|Permanent neonatal diabetes mellitus [MedGen:C3661900|MONDO:MONDO:0100164,MedGen:C1833104,OMIM:PS606176,Orphanet:99885]; Hyperinsulinism due to glucokinase deficiency [MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299]; Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552]; Type 2 diabetes mellitus|Maturity-onset diabetes of the young type 2 [Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs770231054
|
Likely pathogenic |
Maturity onset diabetes mellitus in young [Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs770331582
|
- |
- |
|
rs772754004
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs779828856
|
- |
- |
|
rs794727839
|
Likely pathogenic |
not provided|Maturity-onset diabetes of the young type 2|Maturity onset diabetes mellitus in young|Monogenic diabetes|not specified [MedGen:C3661900|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|MedGen:CN169374] |
|
rs80356655
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs80356655
|
Pathogenic |
Maturity-onset diabetes of the young type 2|not provided|Permanent neonatal diabetes mellitus 1|Maturity onset diabetes mellitus in young|Type 2 diabetes mellitus|Hyperinsulinism due to glucokinase deficiency|Monogenic diabetes [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900|MONDO:MONDO:0100165,MedGen:C5393570,OMIM:606176|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853|MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
hsa00531
|
Glycosaminoglycan degradation
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
GM1-gangliosidosis 1 (GM1G1) [MIM:230500] |
|
-
|
Pathogenic |
Infantile GM1 gangliosidosis|Mucopolysaccharidosis, MPS-IV-B [MONDO:MONDO:0009260,MedGen:C0268271,OMIM:230500,Orphanet:354,Orphanet:79255|MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582]; GM1 gangliosidosis [MONDO:MONDO:0018149,MedGen:C0085131,Orphanet:354] |
|
-
|
LP/P |
GM1-gangliosidosis 2 (GM1G2) [MIM:230600] |
|
-
|
LP/P |
Mucopolysaccharidosis 3B (MPS3B) [MIM:252920] |
|
-
|
Pathogenic |
GM1 gangliosidosis [MONDO:MONDO:0018149,MedGen:C0085131,Orphanet:354]; Mucopolysaccharidosis, MPS-IV-B [MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582] |
|
-
|
Likely pathogenic |
Sandhoff disease [MONDO:MONDO:0010006,MedGen:C0036161,OMIM:268800,Orphanet:796] |
|
-
|
LP/P |
GM2-gangliosidosis 1 (GM2G1) [MIM:272800] |
|
-
|
Pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
-
|
LP/P |
Mucopolysaccharidosis 1H (MPS1H) [MIM:607014] |
|
-
|
LP/P |
Mucopolysaccharidosis 1S (MPS1S) [MIM:607016] |
|
.
|
- |
- |
|
rs1046611742
|
US |
A sporadic cancer |
|
rs1054374
|
LB/B |
- |
|
rs1131691007
|
US |
Sporadic cancers |
|
rs121907964
|
Pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
rs121965029
|
- |
- |
|
rs121965029
|
Pathogenic |
Mucopolysaccharidosis, MPS-I-H/S|Hurler syndrome|Mucopolysaccharidosis type 1 [MONDO:MONDO:0011759,MedGen:C0086431,OMIM:607015,Orphanet:93476|Human Phenotype Ontology:HP:0000943,MONDO:MONDO:0011758,MedGen:C0086795,OMIM:607014,Orphanet:93473|MONDO:MONDO:0001586,MedGen:C0023786,Orphanet:579] |
|
rs121965029
|
LP/P |
Mucopolysaccharidosis 1S (MPS1S) [MIM:607016] |
|
rs1244655820
|
Pathogenic/Likely pathogenic |
Sanfilippo syndrome|Mucopolysaccharidosis, MPS-III-B|Mucopolysaccharidosis, MPS-III-B [MONDO:MONDO:0018937,MedGen:C0026706,Orphanet:581|MONDO:MONDO:0009656,MedGen:C0086648,OMIM:252920,Orphanet:79270|MONDO:MONDO:0009656,MedGen:C0086648,OMIM:252920,Orphanet:79270]; Charcot-Marie-Tooth disease axonal type 2V|not provided|Inborn genetic diseases [MONDO:MONDO:0014665,MedGen:C5569050,OMIM:616491,Orphanet:447964|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs1282031681
|
Likely pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
rs1322698222
|
Likely pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
rs1378338444
|
Pathogenic/Likely pathogenic |
GM1 gangliosidosis type 3 [MONDO:MONDO:0009262,MedGen:C0268273,OMIM:230650,Orphanet:79257]; Infantile GM1 gangliosidosis [MONDO:MONDO:0009260,MedGen:C0268271,OMIM:230500,Orphanet:354,Orphanet:79255]; GM1 gangliosidosis type 2|GM1 gangliosidosis [MONDO:MONDO:0009261,MedGen:C0268272,OMIM:230600,Orphanet:354,Orphanet:79256|MONDO:MONDO:0018149,MedGen:C0085131,Orphanet:354]; Mucopolysaccharidosis, MPS-IV-B [MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582] |
|
rs1453167097
|
US |
Sporadic cancers |
|
rs1553612220
|
LP/P |
Mucopolysaccharidosis 4B (MPS4B) [MIM:253010] |
|
rs1555526214
|
US |
Sporadic cancers |
|
rs1555526226
|
US |
Sporadic cancers |
|
rs1555622533
|
Likely pathogenic |
Mucopolysaccharidosis, MPS-III-B [MONDO:MONDO:0009656,MedGen:C0086648,OMIM:252920,Orphanet:79270] |
|
rs1595802191
|
Pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
rs1699002261
|
Likely pathogenic |
GM1 gangliosidosis type 3 [MONDO:MONDO:0009262,MedGen:C0268273,OMIM:230650,Orphanet:79257]; GM1 gangliosidosis type 2 [MONDO:MONDO:0009261,MedGen:C0268272,OMIM:230600,Orphanet:354,Orphanet:79256]; Infantile GM1 gangliosidosis [MONDO:MONDO:0009260,MedGen:C0268271,OMIM:230500,Orphanet:354,Orphanet:79255] |
|
rs1699791081
|
Likely pathogenic |
GM1 gangliosidosis [MONDO:MONDO:0018149,MedGen:C0085131,Orphanet:354]; Mucopolysaccharidosis, MPS-IV-B [MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582] |
|
rs1702209367
|
Pathogenic |
Deficiency of hyaluronoglucosaminidase [MONDO:MONDO:0011093,MedGen:C1291490,OMIM:601492,Orphanet:67041] |
|
rs1702209886
|
Pathogenic |
Deficiency of hyaluronoglucosaminidase [MONDO:MONDO:0011093,MedGen:C1291490,OMIM:601492,Orphanet:67041] |
|
rs1715120049
|
Pathogenic |
Mucopolysaccharidosis type 1|Hurler syndrome [MONDO:MONDO:0001586,MedGen:C0023786,Orphanet:579|Human Phenotype Ontology:HP:0000943,MONDO:MONDO:0011758,MedGen:C0086795,OMIM:607014,Orphanet:93473] |
|
rs1749652247
|
Likely pathogenic |
Sandhoff disease [MONDO:MONDO:0010006,MedGen:C0036161,OMIM:268800,Orphanet:796] |
|
rs199578185
|
LP/P |
GM2-gangliosidosis 1 (GM2G1) [MIM:272800] |
|
rs2088732981
|
Likely pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
rs2089059318
|
Likely pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
rs2092912895
|
Likely pathogenic |
Mucopolysaccharidosis, MPS-III-B [MONDO:MONDO:0009656,MedGen:C0086648,OMIM:252920,Orphanet:79270] |
|
rs2143111795
|
Pathogenic |
Mucopolysaccharidosis, MPS-III-B [MONDO:MONDO:0009656,MedGen:C0086648,OMIM:252920,Orphanet:79270]; Charcot-Marie-Tooth disease axonal type 2V [MONDO:MONDO:0014665,MedGen:C5569050,OMIM:616491,Orphanet:447964] |
|
rs368454909
|
LP/P |
Mucopolysaccharidosis 1H (MPS1H) [MIM:607014] |
|
rs370107958
|
Likely pathogenic |
not specified|Mucopolysaccharidosis, MPS-IV-B [MedGen:CN169374|MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582] |
|
rs376663785
|
LP/P |
GM1-gangliosidosis 3 (GM1G3) [MIM:230650] |
|
rs376663785
|
Pathogenic/Likely pathogenic |
not provided|Inborn genetic diseases|Mucopolysaccharidosis, MPS-IV-B [MedGen:C3661900|MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582]; GM1 gangliosidosis|GM1 gangliosidosis type 2 [MONDO:MONDO:0018149,MedGen:C0085131,Orphanet:354|MONDO:MONDO:0009261,MedGen:C0268272,OMIM:230600,Orphanet:354,Orphanet:79256]; Infantile GM1 gangliosidosis [MONDO:MONDO:0009260,MedGen:C0268271,OMIM:230500,Orphanet:354,Orphanet:79255]; Mucopolysaccharidosis, MPS-IV-B [MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582]; GM1 gangliosidosis type 3|Mucopolysaccharidosis, MPS-IV-B|GLB1-Related Disorders [MONDO:MONDO:0009262,MedGen:C0268273,OMIM:230650,Orphanet:79257|MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582|MedGen:CN169666] |
|
rs558683362
|
LP/P |
Mucopolysaccharidosis 1H (MPS1H) [MIM:607014] |
|
rs72555362
|
LP/P |
Mucopolysaccharidosis 4B (MPS4B) [MIM:253010] |
|
rs72555364
|
LP/P |
Mucopolysaccharidosis 4B (MPS4B) [MIM:253010] |
|
rs748190164
|
US |
GM2-gangliosidosis 1 (GM2G1) [MIM:272800] |
|
rs750496798
|
LP/P |
Mucopolysaccharidosis 1H/S (MPS1H/S) [MIM:607015] |
|
rs751393950
|
Pathogenic/Likely pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
rs754154200
|
LP/P |
Mucopolysaccharidosis 1H (MPS1H) [MIM:607014] |
|
rs754966840
|
LP/P |
Mucopolysaccharidosis 1S (MPS1S) [MIM:607016] |
|
rs754966840
|
Pathogenic/Likely pathogenic |
Mucopolysaccharidosis type 1|not provided|Mucopolysaccharidosis, MPS-I-S [MONDO:MONDO:0001586,MedGen:C0023786,Orphanet:579|MedGen:C3661900|MONDO:MONDO:0011760,MedGen:C0026708,OMIM:607016,Orphanet:93474]; Hurler syndrome [Human Phenotype Ontology:HP:0000943,MONDO:MONDO:0011758,MedGen:C0086795,OMIM:607014,Orphanet:93473]; Mucopolysaccharidosis, MPS-I-H/S [MONDO:MONDO:0011759,MedGen:C0086431,OMIM:607015,Orphanet:93476] |
|
rs755967220
|
- |
- |
|
rs763475083
|
- |
- |
|
rs769814524
|
- |
- |
|
rs772132346
|
- |
- |
|
rs779453450
|
Pathogenic |
Sandhoff disease [MONDO:MONDO:0010006,MedGen:C0036161,OMIM:268800,Orphanet:796] |
|
rs781875133
|
- |
- |
|
rs782102164
|
- |
- |
|
rs786203064
|
US |
Sporadic cancers |
|
rs794726877
|
LP/P |
Mucopolysaccharidosis 1H (MPS1H) [MIM:607014] |
|
rs794726877
|
Pathogenic |
Hurler syndrome|Mucopolysaccharidosis type 1|not provided|Mucopolysaccharidosis, MPS-I-S [Human Phenotype Ontology:HP:0000943,MONDO:MONDO:0011758,MedGen:C0086795,OMIM:607014,Orphanet:93473|MONDO:MONDO:0001586,MedGen:C0023786,Orphanet:579|MedGen:C3661900|MONDO:MONDO:0011760,MedGen:C0026708,OMIM:607016,Orphanet:93474]; Hurler syndrome [Human Phenotype Ontology:HP:0000943,MONDO:MONDO:0011758,MedGen:C0086795,OMIM:607014,Orphanet:93473]; Mucopolysaccharidosis, MPS-I-H/S [MONDO:MONDO:0011759,MedGen:C0086431,OMIM:607015,Orphanet:93476] |
|
rs879050821
|
LP/P |
GM1-gangliosidosis 1 (GM1G1) [MIM:230500] |
|
rs886042079
|
LB/B |
- |
|
rs886042079
|
Likely pathogenic |
Infantile GM1 gangliosidosis [MONDO:MONDO:0009260,MedGen:C0268271,OMIM:230500,Orphanet:354,Orphanet:79255] |
|
rs968221254
|
LP/P |
Mucopolysaccharidosis 4B (MPS4B) [MIM:253010] |
rn00541
|
O-Antigen nucleotide sugar biosynthesis
|
dbSNP |
Type |
Disease name |
|
-
|
Pathogenic |
Sialuria [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166]; GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602] |
|
-
|
LP/P |
Nonaka myopathy (NM) [MIM:605820] |
|
-
|
LP/P |
Developmental and epileptic encephalopathy 84 (DEE84) [MIM:618792] |
|
.
|
- |
- |
|
rs1057516374
|
Pathogenic/Likely pathogenic |
GNE myopathy|GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602|MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602]; Sialuria|not provided [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166|MedGen:C3661900] |
|
rs1057516746
|
Pathogenic/Likely pathogenic |
GNE myopathy|GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602|MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602]; Sialuria [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166] |
|
rs1057516906
|
Pathogenic/Likely pathogenic |
GNE myopathy|GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602|MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602]; Sialuria|not provided [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166|MedGen:C3661900] |
|
rs1166093458
|
- |
- |
|
rs1212623980
|
Pathogenic/Likely pathogenic |
GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602] |
|
rs121908047
|
LP/P |
Galactosemia 3 (GALAC3) [MIM:230350] |
|
rs121908628
|
Pathogenic |
GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602] |
|
rs121908633
|
LP/P |
Nonaka myopathy (NM) [MIM:605820] |
|
rs1236647498
|
Pathogenic/Likely pathogenic |
GNE myopathy|GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602|MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602]; Sialuria|not provided [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166|MedGen:C3661900] |
|
rs137853860
|
- |
- |
|
rs137853860
|
LP/P |
Galactosemia 3 (GALAC3) [MIM:230350] |
|
rs137853861
|
- |
- |
|
rs137853861
|
LP/P |
Galactosemia 3 (GALAC3) [MIM:230350] |
|
rs139620518
|
- |
- |
|
rs139998516
|
- |
- |
|
rs140641547
|
- |
- |
|
rs143026820
|
- |
- |
|
rs1455785164
|
LP/P |
Nonaka myopathy (NM) [MIM:605820] |
|
rs150279875
|
- |
- |
|
rs150694299
|
- |
- |
|
rs1554658910
|
LP/P |
Nonaka myopathy (NM) [MIM:605820] |
|
rs1554658955
|
Pathogenic |
Sialuria [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166]; GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602] |
|
rs1554664064
|
Pathogenic |
Sialuria [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166]; GNE myopathy|GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602|MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602] |
|
rs1554664064
|
LP/P |
Nonaka myopathy (NM) [MIM:605820] |
|
rs1563938450
|
- |
- |
|
rs190292776
|
- |
- |
|
rs199878471
|
- |
- |
|
rs201894374
|
US |
Developmental and epileptic encephalopathy 84 (DEE84) [MIM:618792] |
|
rs2133006228
|
Pathogenic |
Sialuria [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166]; GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602] |
|
rs369608407
|
Pathogenic/Likely pathogenic |
Epileptic encephalopathy|Developmental and epileptic encephalopathy, 84 [Human Phenotype Ontology:HP:0200134,MedGen:C0543888|MONDO:MONDO:0032918,MedGen:C5394081,OMIM:618792] |
|
rs369714039
|
- |
- |
|
rs371050975
|
- |
- |
|
rs397518462
|
LP/P |
Alacrima, achalasia, and impaired intellectual development syndrome (AAMR) [MIM:615510] |
|
rs533469192
|
- |
- |
|
rs727503942
|
- |
- |
|
rs747199032
|
- |
- |
|
rs747199032
|
Pathogenic |
GNE myopathy|GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602|MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602]; Sialuria|not provided [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166|MedGen:C3661900] |
|
rs749145675
|
- |
- |
|
rs750714549
|
- |
- |
|
rs751395832
|
- |
- |
|
rs751571666
|
- |
- |
|
rs757091387
|
Pathogenic/Likely pathogenic |
GNE myopathy|not provided|GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602|MedGen:C3661900|MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602]; Sialuria [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166] |
|
rs758814313
|
Likely pathogenic |
GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602] |
|
rs761714818
|
LP/P |
Muscular dystrophy-dystroglycanopathy limb-girdle C14 (MDDGC14) [MIM:615352] |
|
rs779694939
|
LP/P |
Nonaka myopathy (NM) [MIM:605820] |
|
rs779694939
|
Pathogenic/Likely pathogenic |
GNE myopathy|not provided|GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602|MedGen:C3661900|MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602]; Sialuria [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166] |
|
rs786204558
|
Pathogenic/Likely pathogenic |
GNE myopathy|Sialuria [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602|MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166]; GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602] |
|
rs886043979
|
LP/P |
Nonaka myopathy (NM) [MIM:605820] |
rn00552
|
Teichoic acid biosynthesis
|
dbSNP |
Type |
Disease name |
|
.
|
- |
- |
|
rs1283988003
|
- |
- |
|
rs1333100080
|
Pathogenic |
Megaconial type congenital muscular dystrophy [MONDO:MONDO:0011246,MedGen:C1865233,OMIM:602541,Orphanet:280671] |
|
rs587777190
|
Pathogenic/Likely pathogenic |
Spondylometaphyseal dysplasia-cone-rod dystrophy syndrome|not provided [MONDO:MONDO:0012160,MedGen:C1837073,OMIM:608940,Orphanet:85167|MedGen:C3661900] |
|
rs749211062
|
- |
- |
|
rs763056271
|
LP/P |
Neurodevelopmental disorder with microcephaly, movement abnormalities, and seizures (NEDMIMS) [MIM:620023] |
hsa00561
|
Glycerolipid metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
-
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
-
|
Pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
-
|
Pathogenic |
Spondyloenchondrodysplasia with immune dysregulation [MONDO:MONDO:0011939,MedGen:C1842763,OMIM:607944,Orphanet:1855] |
|
.
|
- |
- |
|
rs104894832
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs104894840
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs104894841
|
Pathogenic |
Fabry disease|not provided [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324|MedGen:C3661900] |
|
rs104894845
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs1057521047
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs113173389
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs1170817007
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1183869568
|
Pathogenic |
not provided|Fabry disease [MedGen:C3661900|Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs121912707
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Seizure|Pyridoxine-dependent epilepsy caused by ALDH7A1 mutant [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|Human Phenotype Ontology:HP:0001250,Human Phenotype Ontology:HP:0001275,Human Phenotype Ontology:HP:0001303,Human Phenotype Ontology:HP:0002125,Human Phenotype Ontology:HP:0002182,Human Phenotype Ontology:HP:0002279,Human Phenotype Ontology:HP:0002306,Human Phenotype Ontology:HP:0002348,Human Phenotype Ontology:HP:0002391,Human Phenotype Ontology:HP:0002417,Human Phenotype Ontology:HP:0002430,Human Phenotype Ontology:HP:0002431,Human Phenotype Ontology:HP:0002432,Human Phenotype Ontology:HP:0002434,Human Phenotype Ontology:HP:0002437,Human Phenotype Ontology:HP:0002466,Human Phenotype Ontology:HP:0002479,Human Phenotype Ontology:HP:0002794,Human Phenotype Ontology:HP:0006997,Human Phenotype Ontology:HP:0010520,MedGen:C0036572|MONDO:MONDO:0020741,MedGen:CN293409] |
|
rs121912711
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs1294428481
|
- |
- |
|
rs1311982393
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1348837644
|
- |
- |
|
rs138887023
|
- |
- |
|
rs142179752
|
- |
- |
|
rs146556418
|
- |
- |
|
rs148550603
|
- |
- |
|
rs150526754
|
- |
- |
|
rs1750309299
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1750388096
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1928137126
|
Likely pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs1928189534
|
Pathogenic |
Fabry disease|not provided [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324|MedGen:C3661900] |
|
rs1928195468
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs1928326804
|
Pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs1928406948
|
Likely pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs200000745
|
- |
- |
|
rs200755203
|
- |
- |
|
rs201321507
|
- |
- |
|
rs201948406
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Inborn genetic diseases [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs2145087630
|
Pathogenic |
Spondyloenchondrodysplasia with immune dysregulation [MONDO:MONDO:0011939,MedGen:C1842763,OMIM:607944,Orphanet:1855] |
|
rs2147480697
|
Likely pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs2458502
|
- |
- |
|
rs28935487
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs28935491
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs28935492
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs372045419
|
- |
- |
|
rs372660425
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs398123221
|
Pathogenic |
not provided|Fabry disease [MedGen:C3661900|Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs5054
|
LB/B |
- |
|
rs5056
|
LB/B |
- |
|
rs573040804
|
- |
- |
|
rs727505292
|
US |
Fabry disease (FD) [MIM:301500] |
|
rs730880451
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs746133481
|
- |
- |
|
rs761295869
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs772416096
|
- |
- |
|
rs773503933
|
- |
- |
|
rs775137066
|
- |
- |
|
rs776421832
|
- |
- |
|
rs781050795
|
Pathogenic/Likely pathogenic |
Spondyloenchondrodysplasia with immune dysregulation|Inborn genetic diseases|ACP5-related condition [MONDO:MONDO:0011939,MedGen:C1842763,OMIM:607944,Orphanet:1855|MeSH:D030342,MedGen:C0950123|] |
|
rs782085638
|
Pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs796052271
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs797044727
|
Likely pathogenic |
Fabry disease|not provided [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324|MedGen:C3661900] |
|
rs797044749
|
Pathogenic/Likely pathogenic |
Fabry disease|not provided|Cardiovascular phenotype [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324|MedGen:C3661900|MedGen:CN230736] |
|
rs864622558
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs869312153
|
US |
Fabry disease (FD) [MIM:301500] |
|
rs869312160
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312161
|
US |
Fabry disease (FD) [MIM:301500] |
|
rs869312214
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312218
|
Pathogenic |
Fabry disease|not provided [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324|MedGen:C3661900] |
|
rs869312254
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312255
|
Likely pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs869312256
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312270
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312317
|
Likely pathogenic |
Fabry disease|not provided [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324|MedGen:C3661900] |
|
rs869312318
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312393
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312396
|
Likely pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs869312407
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312408
|
Likely pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs886041315
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs886044843
|
Pathogenic/Likely pathogenic |
not provided|Fabry disease [MedGen:C3661900|Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs886044845
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs965741395
|
Pathogenic |
Spondyloenchondrodysplasia with immune dysregulation [MONDO:MONDO:0011939,MedGen:C1842763,OMIM:607944,Orphanet:1855] |
hsa00562
|
Inositol phosphate metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Lowe syndrome [MONDO:MONDO:0010645,MedGen:C0028860,OMIM:309000,Orphanet:534] |
|
-
|
Pathogenic |
Spondyloenchondrodysplasia with immune dysregulation [MONDO:MONDO:0011939,MedGen:C1842763,OMIM:607944,Orphanet:1855] |
|
-
|
LP/P |
Epileptic encephalopathy, infantile or early childhood, 1 (IECEE1) [MIM:617711] |
|
.
|
- |
- |
|
rs104893950
|
Pathogenic |
Lafora disease|not provided|Progressive myoclonic epilepsy|Inborn genetic diseases [MONDO:MONDO:0009697,MedGen:C0751783,OMIM:254780,OMIM:PS254780,Orphanet:501|MedGen:C3661900|MONDO:MONDO:0020074,MedGen:C0751778,OMIM:PS254800,Orphanet:308,Orphanet:98261|MeSH:D030342,MedGen:C0950123] |
|
rs1057519933
|
Pathogenic |
Gastric adenocarcinoma|Neuroblastoma|Squamous cell carcinoma of the head and neck|Malignant neoplasm of body of uterus|Neoplasm of the large intestine|Glioblastoma|Multiple myeloma|Neoplasm of uterine cervix|Lung adenocarcinoma|Neoplasm of brain|Breast neoplasm|Cowden syndrome 5 [Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0003006,Human Phenotype Ontology:HP:0006738,MONDO:MONDO:0005072,MeSH:D009447,MedGen:C0027819,Orphanet:635|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MedGen:C0153574|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0014047,MedGen:C3554518,OMIM:615108,Orphanet:201] |
|
rs1057519935
|
Likely pathogenic |
Neoplasm of uterine cervix|Lung adenocarcinoma|Gastric adenocarcinoma|Breast neoplasm|Squamous cell carcinoma of the head and neck|Multiple myeloma|Glioblastoma|Neoplasm of the large intestine|Neuroblastoma|Neoplasm of brain|Malignant neoplasm of body of uterus [Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0003006,Human Phenotype Ontology:HP:0006738,MONDO:MONDO:0005072,MeSH:D009447,MedGen:C0027819,Orphanet:635|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MedGen:C0153574] |
|
rs1192325470
|
- |
- |
|
rs1206608117
|
- |
- |
|
rs121434402
|
Pathogenic |
Charcot-Marie-Tooth disease type 4B1|Charcot-Marie-Tooth disease type 4 [MONDO:MONDO:0011066,MedGen:C1832399,OMIM:601382,Orphanet:99955|MONDO:MONDO:0018995,MedGen:C4082197,Orphanet:64749] |
|
rs1334933549
|
Pathogenic |
Epileptic encephalopathy, infantile or early childhood, 1 [MONDO:MONDO:0020630,MedGen:C4540199,OMIM:617711] |
|
rs1360253040
|
- |
- |
|
rs1377962337
|
- |
- |
|
rs137853261
|
LP/P |
Lowe oculocerebrorenal syndrome (OCRL) [MIM:309000] |
|
rs137853842
|
LP/P |
Lowe oculocerebrorenal syndrome (OCRL) [MIM:309000] |
|
rs137853846
|
LP/P |
Dent disease 2 (DENT2) [MIM:300555] |
|
rs137853848
|
LP/P |
Lowe oculocerebrorenal syndrome (OCRL) [MIM:309000] |
|
rs137853852
|
LP/P |
Lowe oculocerebrorenal syndrome (OCRL) [MIM:309000] |
|
rs137853853
|
LP/P |
Lowe oculocerebrorenal syndrome (OCRL) [MIM:309000] |
|
rs137853856
|
LP/P |
Lowe oculocerebrorenal syndrome (OCRL) [MIM:309000] |
|
rs137853857
|
LP/P |
Lowe oculocerebrorenal syndrome (OCRL) [MIM:309000] |
|
rs142179752
|
- |
- |
|
rs1454273149
|
- |
- |
|
rs1456428824
|
- |
- |
|
rs1463675604
|
- |
- |
|
rs1475371630
|
- |
- |
|
rs148550603
|
- |
- |
|
rs148563375
|
- |
- |
|
rs148572533
|
- |
- |
|
rs151151350
|
- |
- |
|
rs1553311527
|
Pathogenic/Likely pathogenic |
not provided|Noonan syndrome-like disorder with loose anagen hair 2 [MedGen:CN517202|MONDO:MONDO:0054588,MedGen:C4479577,OMIM:617506] |
|
rs1553923787
|
LP/P |
Epileptic encephalopathy, infantile or early childhood, 1 (IECEE1) [MIM:617711] |
|
rs1553923787
|
Pathogenic/Likely pathogenic |
Inborn genetic diseases|Epileptic encephalopathy, infantile or early childhood, 1|Epileptic encephalopathy|Arthrogryposis, cleft palate, craniosynostosis, and impaired intellectual development [MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0020630,MedGen:C4540199,OMIM:617711|Human Phenotype Ontology:HP:0200134,MedGen:C0543888|MONDO:MONDO:0032642,MedGen:C4748872,OMIM:618265,Orphanet:565858]; Epileptic encephalopathy, infantile or early childhood, 1|not provided [MONDO:MONDO:0020630,MedGen:C4540199,OMIM:617711|MedGen:C3661900] |
|
rs1553925558
|
LP/P |
Epileptic encephalopathy, infantile or early childhood, 1 (IECEE1) [MIM:617711] |
|
rs17856552
|
- |
- |
|
rs184615614
|
- |
- |
|
rs186875136
|
- |
- |
|
rs192535553
|
- |
- |
|
rs199549932
|
- |
- |
|
rs199706529
|
LP/P |
Epileptic encephalopathy, infantile or early childhood, 1 (IECEE1) [MIM:617711] |
|
rs199845096
|
- |
- |
|
rs199943173
|
- |
- |
|
rs200478856
|
- |
- |
|
rs200602157
|
- |
- |
|
rs200755203
|
- |
- |
|
rs201053542
|
Pathogenic |
Progressive myoclonic epilepsy [MONDO:MONDO:0020074,MedGen:C0751778,OMIM:PS254800,Orphanet:308,Orphanet:98261] |
|
rs202203713
|
- |
- |
|
rs2124412861
|
Pathogenic |
Lowe syndrome [MONDO:MONDO:0010645,MedGen:C0028860,OMIM:309000,Orphanet:534] |
|
rs2145087630
|
Pathogenic |
Spondyloenchondrodysplasia with immune dysregulation [MONDO:MONDO:0011939,MedGen:C1842763,OMIM:607944,Orphanet:1855] |
|
rs28730674
|
- |
- |
|
rs370028348
|
- |
- |
|
rs370384697
|
- |
- |
|
rs371840002
|
- |
- |
|
rs372045419
|
- |
- |
|
rs373442940
|
- |
- |
|
rs373875697
|
- |
- |
|
rs375683615
|
Pathogenic |
Nonsyndromic congenital nail disorder 3 [MONDO:MONDO:0007900,MedGen:C0544855,OMIM:151600] |
|
rs375968716
|
- |
- |
|
rs376587143
|
- |
- |
|
rs72483511
|
- |
- |
|
rs745602817
|
- |
- |
|
rs746133481
|
- |
- |
|
rs746363298
|
- |
- |
|
rs750632554
|
- |
- |
|
rs752157350
|
- |
- |
|
rs753623153
|
- |
- |
|
rs754406296
|
- |
- |
|
rs755770972
|
- |
- |
|
rs756613323
|
- |
- |
|
rs757209932
|
- |
- |
|
rs757707616
|
- |
- |
|
rs764709556
|
- |
- |
|
rs767412697
|
- |
- |
|
rs768191198
|
- |
- |
|
rs771075297
|
- |
- |
|
rs771353244
|
- |
- |
|
rs771815535
|
- |
- |
|
rs773780893
|
- |
- |
|
rs774420692
|
- |
- |
|
rs777831500
|
- |
- |
|
rs778194087
|
- |
- |
|
rs778265977
|
- |
- |
|
rs779148739
|
- |
- |
|
rs780267002
|
- |
- |
|
rs781050795
|
Pathogenic/Likely pathogenic |
Spondyloenchondrodysplasia with immune dysregulation|Inborn genetic diseases|ACP5-related condition [MONDO:MONDO:0011939,MedGen:C1842763,OMIM:607944,Orphanet:1855|MeSH:D030342,MedGen:C0950123|] |
|
rs781956310
|
- |
- |
|
rs863225460
|
LP/P |
Megalencephaly-capillary malformation-polymicrogyria syndrome (MCAP) [MIM:602501] |
|
rs907949538
|
- |
- |
|
rs949528021
|
- |
- |
|
rs965741395
|
Pathogenic |
Spondyloenchondrodysplasia with immune dysregulation [MONDO:MONDO:0011939,MedGen:C1842763,OMIM:607944,Orphanet:1855] |
|
rs975282953
|
- |
- |
|
rs993552815
|
- |
- |
hsa00564
|
Glycerophospholipid metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Familial infantile myasthenia [MONDO:MONDO:0009689,MedGen:C0393929,OMIM:254210,Orphanet:590] |
|
-
|
LP/P |
Butyrylcholinesterase deficiency (BCHED) [MIM:617936] |
|
-
|
Pathogenic |
Deficiency of butyrylcholinesterase [MONDO:MONDO:0015270,MedGen:C1283400,OMIM:617936,Orphanet:132] |
|
.
|
- |
- |
|
rs104894025
|
Pathogenic/Likely pathogenic |
Hemolytic anemia due to pyrimidine 5' nucleotidase deficiency|not provided [MONDO:MONDO:0009946,MedGen:C1849507,OMIM:266120,Orphanet:35120|MedGen:C3661900] |
|
rs104894027
|
Pathogenic |
Hemolytic anemia due to pyrimidine 5' nucleotidase deficiency [MONDO:MONDO:0009946,MedGen:C1849507,OMIM:266120,Orphanet:35120] |
|
rs104894028
|
Pathogenic |
Hemolytic anemia due to pyrimidine 5' nucleotidase deficiency [MONDO:MONDO:0009946,MedGen:C1849507,OMIM:266120,Orphanet:35120] |
|
rs104894029
|
Pathogenic |
Hemolytic anemia due to pyrimidine 5' nucleotidase deficiency [MONDO:MONDO:0009946,MedGen:C1849507,OMIM:266120,Orphanet:35120] |
|
rs114991020
|
- |
- |
|
rs121912819
|
LP/P |
Myasthenic syndrome, congenital, 6, presynaptic (CMS6) [MIM:254210] |
|
rs121918558
|
LP/P |
Butyrylcholinesterase deficiency (BCHED) [MIM:617936] |
|
rs1283988003
|
- |
- |
|
rs1333100080
|
Pathogenic |
Megaconial type congenital muscular dystrophy [MONDO:MONDO:0011246,MedGen:C1865233,OMIM:602541,Orphanet:280671] |
|
rs1458796820
|
Pathogenic/Likely pathogenic |
Familial infantile myasthenia [MONDO:MONDO:0009689,MedGen:C0393929,OMIM:254210,Orphanet:590] |
|
rs1554802792
|
Likely pathogenic |
Familial infantile myasthenia [MONDO:MONDO:0009689,MedGen:C0393929,OMIM:254210,Orphanet:590] |
|
rs1799807
|
LP/P |
Butyrylcholinesterase deficiency (BCHED) [MIM:617936] |
|
rs201820739
|
LP/P |
Butyrylcholinesterase deficiency (BCHED) [MIM:617936] |
|
rs2232202
|
LB/B |
- |
|
rs370077923
|
LP/P |
Butyrylcholinesterase deficiency (BCHED) [MIM:617936] |
|
rs372760913
|
Pathogenic/Likely pathogenic |
Familial infantile myasthenia|not provided|Congenital myasthenic syndrome [MONDO:MONDO:0009689,MedGen:C0393929,OMIM:254210,Orphanet:590|MedGen:C3661900|MONDO:MONDO:0018940,MeSH:D020294,MedGen:C0751882,OMIM:PS601462,Orphanet:590] |
|
rs531738678
|
LP/P |
Butyrylcholinesterase deficiency (BCHED) [MIM:617936] |
|
rs587777190
|
Pathogenic/Likely pathogenic |
Spondylometaphyseal dysplasia-cone-rod dystrophy syndrome|not provided [MONDO:MONDO:0012160,MedGen:C1837073,OMIM:608940,Orphanet:85167|MedGen:C3661900] |
|
rs746699081
|
- |
- |
|
rs747598704
|
LP/P |
Butyrylcholinesterase deficiency (BCHED) [MIM:617936] |
|
rs749211062
|
- |
- |
|
rs752823953
|
- |
- |
|
rs752868920
|
- |
- |
|
rs754008203
|
- |
- |
|
rs757303526
|
Likely pathogenic |
Familial infantile myasthenia [MONDO:MONDO:0009689,MedGen:C0393929,OMIM:254210,Orphanet:590] |
|
rs760182781
|
- |
- |
|
rs760182781
|
Likely pathogenic |
Deficiency of butyrylcholinesterase [MONDO:MONDO:0015270,MedGen:C1283400,OMIM:617936,Orphanet:132] |
|
rs763056271
|
LP/P |
Neurodevelopmental disorder with microcephaly, movement abnormalities, and seizures (NEDMIMS) [MIM:620023] |
|
rs765408826
|
- |
- |
|
rs766600401
|
- |
- |
|
rs768881975
|
- |
- |
|
rs770337031
|
LP/P |
Butyrylcholinesterase deficiency (BCHED) [MIM:617936] |
hsa00565
|
Ether lipid metabolism
|
dbSNP |
Type |
Disease name |
|
.
|
- |
- |
|
rs1051931
|
LB/B |
- |
|
rs149152218
|
- |
- |
|
rs150329930
|
- |
- |
|
rs200052639
|
- |
- |
|
rs200596734
|
- |
- |
|
rs2289886
|
- |
- |
|
rs45454695
|
LB/B |
- |
|
rs759807131
|
- |
- |
|
rs77319429
|
- |
- |
hsa00590
|
Arachidonic acid metabolism
|
dbSNP |
Type |
Disease name |
|
.
|
- |
- |
|
rs1040271400
|
- |
- |
|
rs104894025
|
Pathogenic/Likely pathogenic |
Hemolytic anemia due to pyrimidine 5' nucleotidase deficiency|not provided [MONDO:MONDO:0009946,MedGen:C1849507,OMIM:266120,Orphanet:35120|MedGen:C3661900] |
|
rs104894026
|
Pathogenic |
Hemolytic anemia due to pyrimidine 5' nucleotidase deficiency [MONDO:MONDO:0009946,MedGen:C1849507,OMIM:266120,Orphanet:35120] |
|
rs104894027
|
Pathogenic |
Hemolytic anemia due to pyrimidine 5' nucleotidase deficiency [MONDO:MONDO:0009946,MedGen:C1849507,OMIM:266120,Orphanet:35120] |
|
rs104894028
|
Pathogenic |
Hemolytic anemia due to pyrimidine 5' nucleotidase deficiency [MONDO:MONDO:0009946,MedGen:C1849507,OMIM:266120,Orphanet:35120] |
|
rs104894029
|
Pathogenic |
Hemolytic anemia due to pyrimidine 5' nucleotidase deficiency [MONDO:MONDO:0009946,MedGen:C1849507,OMIM:266120,Orphanet:35120] |
|
rs1056892
|
LB/B |
- |
|
rs1057910
|
- |
- |
|
rs113351006
|
- |
- |
|
rs117111102
|
- |
- |
|
rs118203757
|
- |
- |
|
rs1207708075
|
- |
- |
|
rs121434480
|
LP/P |
Cranioosteoarthropathy (COA) [MIM:259100] |
|
rs121434481
|
LP/P |
Digital clubbing, isolated congenital (DIGC) [MIM:119900] |
|
rs1221026723
|
- |
- |
|
rs12414460
|
- |
- |
|
rs1250076835
|
- |
- |
|
rs1273597287
|
- |
- |
|
rs1278639064
|
- |
- |
|
rs13222
|
LP/P |
46,XY sex reversal 8 (SRXY8) [MIM:614279] |
|
rs1332971804
|
- |
- |
|
rs138112316
|
- |
- |
|
rs138142612
|
LB/B |
- |
|
rs138675307
|
- |
- |
|
rs139238143
|
- |
- |
|
rs140111676
|
- |
- |
|
rs140152561
|
LB/B |
- |
|
rs1405313151
|
- |
- |
|
rs141489852
|
- |
- |
|
rs141774245
|
- |
- |
|
rs142529153
|
- |
- |
|
rs144038526
|
- |
- |
|
rs145989297
|
- |
- |
|
rs146282307
|
- |
- |
|
rs146938082
|
- |
- |
|
rs147238486
|
- |
- |
|
rs1477251308
|
- |
- |
|
rs148593307
|
- |
- |
|
rs1486164573
|
- |
- |
|
rs149295644
|
- |
- |
|
rs150456822
|
- |
- |
|
rs151037870
|
- |
- |
|
rs1554770634
|
- |
- |
|
rs1564317029
|
- |
- |
|
rs17004876
|
LB/B |
- |
|
rs17134592
|
- |
- |
|
rs1736201319
|
Pathogenic |
Hypertrophic osteoarthropathy, primary, autosomal recessive, 1 [MONDO:MONDO:0024546,MedGen:C4551679,OMIM:259100,Orphanet:1525,Orphanet:2796] |
|
rs17884712
|
LB/B |
- |
|
rs184571563
|
- |
- |
|
rs188934928
|
LB/B |
- |
|
rs192154563
|
LB/B |
- |
|
rs200183364
|
- |
- |
|
rs200346442
|
- |
- |
|
rs200730776
|
- |
- |
|
rs200908381
|
- |
- |
|
rs200909708
|
- |
- |
|
rs200965026
|
- |
- |
|
rs201045618
|
- |
- |
|
rs2296681
|
- |
- |
|
rs2330126
|
- |
- |
|
rs2835285
|
LB/B |
- |
|
rs28399505
|
LB/B |
- |
|
rs2854482
|
- |
- |
|
rs367826293
|
- |
- |
|
rs368521899
|
- |
- |
|
rs368758960
|
- |
- |
|
rs368767518
|
- |
- |
|
rs369106912
|
- |
- |
|
rs370245703
|
- |
- |
|
rs370269377
|
- |
- |
|
rs370840098
|
- |
- |
|
rs371856135
|
- |
- |
|
rs372922075
|
- |
- |
|
rs373121766
|
- |
- |
|
rs373931629
|
- |
- |
|
rs375805362
|
- |
- |
|
rs41286880
|
- |
- |
|
rs41286884
|
- |
- |
|
rs41291556
|
LB/B |
- |
|
rs41432647
|
- |
- |
|
rs41509647
|
- |
- |
|
rs543931018
|
- |
- |
|
rs56337013
|
LB/B |
- |
|
rs574462231
|
- |
- |
|
rs57505750
|
- |
- |
|
rs59734894
|
- |
- |
|
rs7225107
|
LB/B |
- |
|
rs72552267
|
LB/B |
- |
|
rs72558189
|
- |
- |
|
rs72558191
|
Pathogenic |
Warfarin response [MONDO:MONDO:0007390,MedGen:C0750384,OMIM:122700] |
|
rs72558192
|
- |
- |
|
rs747274803
|
- |
- |
|
rs749485571
|
- |
- |
|
rs750018725
|
- |
- |
|
rs751202598
|
- |
- |
|
rs751305531
|
- |
- |
|
rs751774080
|
Pathogenic |
Hypertrophic osteoarthropathy, primary, autosomal recessive, 1 [MONDO:MONDO:0024546,MedGen:C4551679,OMIM:259100,Orphanet:1525,Orphanet:2796] |
|
rs752132182
|
- |
- |
|
rs752311258
|
- |
- |
|
rs752823953
|
- |
- |
|
rs753270728
|
- |
- |
|
rs753936155
|
- |
- |
|
rs754563323
|
- |
- |
|
rs756333835
|
- |
- |
|
rs763329185
|
- |
- |
|
rs763625282
|
- |
- |
|
rs764137538
|
- |
- |
|
rs764633533
|
- |
- |
|
rs765408826
|
- |
- |
|
rs765456449
|
- |
- |
|
rs765917209
|
- |
- |
|
rs768830601
|
- |
- |
|
rs768881975
|
- |
- |
|
rs771335222
|
- |
- |
|
rs774997677
|
- |
- |
|
rs776908257
|
- |
- |
|
rs777237591
|
- |
- |
|
rs777843558
|
- |
- |
|
rs777882674
|
- |
- |
|
rs780238607
|
- |
- |
|
rs781200594
|
- |
- |
|
rs781583846
|
- |
- |
|
rs782266548
|
- |
- |
|
rs782328441
|
- |
- |
|
rs782421321
|
- |
- |
|
rs79500998
|
- |
- |
|
rs797044460
|
LP/P |
46,XY sex reversal 8 (SRXY8) [MIM:614279] |
|
rs8177445
|
LB/B |
- |
hsa00591
|
Linoleic acid metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
-
|
Likely pathogenic |
Anterior segment dysgenesis 6 [MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
-
|
Likely pathogenic |
Anterior segment dysgenesis [Human Phenotype Ontology:HP:0007696,Human Phenotype Ontology:HP:0007699,Human Phenotype Ontology:HP:0007700,Human Phenotype Ontology:HP:0008040,MONDO:MONDO:0019503,MedGen:C1862839,OMIM:PS107250,Orphanet:88632] |
|
.
|
- |
- |
|
rs1041988
|
LB/B |
- |
|
rs104893628
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs104894025
|
Pathogenic/Likely pathogenic |
Hemolytic anemia due to pyrimidine 5' nucleotidase deficiency|not provided [MONDO:MONDO:0009946,MedGen:C1849507,OMIM:266120,Orphanet:35120|MedGen:C3661900] |
|
rs104894028
|
Pathogenic |
Hemolytic anemia due to pyrimidine 5' nucleotidase deficiency [MONDO:MONDO:0009946,MedGen:C1849507,OMIM:266120,Orphanet:35120] |
|
rs104894029
|
Pathogenic |
Hemolytic anemia due to pyrimidine 5' nucleotidase deficiency [MONDO:MONDO:0009946,MedGen:C1849507,OMIM:266120,Orphanet:35120] |
|
rs104894979
|
Likely pathogenic |
Glaucoma 3A|Anterior segment dysgenesis 6 [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
rs1056827
|
- |
- |
|
rs1057910
|
- |
- |
|
rs117111102
|
- |
- |
|
rs118203757
|
- |
- |
|
rs1200476864
|
- |
- |
|
rs12414460
|
- |
- |
|
rs1250076835
|
- |
- |
|
rs1257727040
|
- |
- |
|
rs12721627
|
LB/B |
- |
|
rs12721629
|
LB/B |
- |
|
rs1278639064
|
- |
- |
|
rs1309748501
|
- |
- |
|
rs138105638
|
- |
- |
|
rs138112316
|
- |
- |
|
rs138142612
|
LB/B |
- |
|
rs138546498
|
- |
- |
|
rs139238143
|
- |
- |
|
rs139250712
|
- |
- |
|
rs140111676
|
- |
- |
|
rs140152561
|
LB/B |
- |
|
rs141489852
|
- |
- |
|
rs141774245
|
- |
- |
|
rs145669559
|
- |
- |
|
rs145774441
|
- |
- |
|
rs146180463
|
- |
- |
|
rs147238486
|
- |
- |
|
rs148593307
|
- |
- |
|
rs148602477
|
- |
- |
|
rs1486164573
|
- |
- |
|
rs149081683
|
- |
- |
|
rs1558603396
|
Likely pathogenic |
Glaucoma 3A|Anterior segment dysgenesis 6 [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
rs17884712
|
LB/B |
- |
|
rs1815413655
|
LP/P |
Vitamin D-dependent rickets 3 (VDDR3) [MIM:619073] |
|
rs184571563
|
- |
- |
|
rs188934928
|
LB/B |
- |
|
rs192154563
|
LB/B |
- |
|
rs199558694
|
- |
- |
|
rs200183364
|
- |
- |
|
rs200346442
|
- |
- |
|
rs200965026
|
- |
- |
|
rs201286895
|
- |
- |
|
rs2125316074
|
Pathogenic/Likely pathogenic |
Glaucoma 3A|Primary congenital glaucoma [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|Human Phenotype Ontology:HP:0008007,MONDO:MONDO:0000365,MedGen:C1533041] |
|
rs2296681
|
- |
- |
|
rs28365085
|
- |
- |
|
rs28371759
|
LB/B |
- |
|
rs28936701
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs28936701
|
Pathogenic |
Glaucoma 3A|not provided|Congenital glaucoma|Primary congenital glaucoma|Anterior segment dysgenesis 6 [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MedGen:C3661900|MONDO:MONDO:0020366,MedGen:C0020302|Human Phenotype Ontology:HP:0008007,MONDO:MONDO:0000365,MedGen:C1533041|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
rs3208363
|
LB/B |
- |
|
rs367826293
|
- |
- |
|
rs368758960
|
- |
- |
|
rs368767518
|
- |
- |
|
rs370434436
|
- |
- |
|
rs372231982
|
- |
- |
|
rs374926260
|
- |
- |
|
rs375805362
|
- |
- |
|
rs41286880
|
- |
- |
|
rs41286884
|
- |
- |
|
rs41291556
|
LB/B |
- |
|
rs41432647
|
- |
- |
|
rs41509647
|
- |
- |
|
rs4986908
|
LB/B |
- |
|
rs4986910
|
LB/B |
- |
|
rs4987161
|
LB/B |
- |
|
rs543931018
|
- |
- |
|
rs55785340
|
LB/B |
- |
|
rs55951658
|
LB/B |
- |
|
rs56324128
|
LB/B |
- |
|
rs56337013
|
LB/B |
- |
|
rs56411402
|
- |
- |
|
rs574462231
|
- |
- |
|
rs57505750
|
- |
- |
|
rs57865060
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs59734894
|
- |
- |
|
rs67784355
|
LB/B |
- |
|
rs7225107
|
LB/B |
- |
|
rs72549378
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs72552267
|
LB/B |
- |
|
rs72552799
|
LB/B |
- |
|
rs72558189
|
- |
- |
|
rs72558191
|
Pathogenic |
Warfarin response [MONDO:MONDO:0007390,MedGen:C0750384,OMIM:122700] |
|
rs72558192
|
- |
- |
|
rs749574339
|
- |
- |
|
rs752456881
|
LB/B |
- |
|
rs753270728
|
- |
- |
|
rs756271054
|
- |
- |
|
rs763625282
|
- |
- |
|
rs764137538
|
- |
- |
|
rs764211126
|
- |
- |
|
rs765408826
|
- |
- |
|
rs765456449
|
- |
- |
|
rs765917209
|
- |
- |
|
rs766107094
|
- |
- |
|
rs768830601
|
- |
- |
|
rs768881975
|
- |
- |
|
rs774168721
|
- |
- |
|
rs774997677
|
- |
- |
|
rs776567184
|
- |
- |
|
rs776908257
|
- |
- |
|
rs777237591
|
- |
- |
|
rs777678299
|
- |
- |
|
rs779989195
|
- |
- |
|
rs780039093
|
- |
- |
|
rs781583846
|
- |
- |
|
rs79500998
|
- |
- |
|
rs9282670
|
LB/B |
- |
|
rs9341250
|
LB/B |
- |
|
rs944452644
|
Likely pathogenic |
Glaucoma 3A|Anterior segment dysgenesis 6 [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
hsa00592
|
alpha-Linolenic acid metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
Pathogenic |
Acyl-CoA oxidase deficiency [MONDO:MONDO:0009919,MedGen:C1849678,OMIM:264470,Orphanet:2971] |
|
-
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
.
|
- |
- |
|
rs1041969
|
LB/B |
- |
|
rs104886492
|
US |
HSD10 mitochondrial disease (HSD10MD) [MIM:300438] |
|
rs104894025
|
Pathogenic/Likely pathogenic |
Hemolytic anemia due to pyrimidine 5' nucleotidase deficiency|not provided [MONDO:MONDO:0009946,MedGen:C1849507,OMIM:266120,Orphanet:35120|MedGen:C3661900] |
|
rs104894028
|
Pathogenic |
Hemolytic anemia due to pyrimidine 5' nucleotidase deficiency [MONDO:MONDO:0009946,MedGen:C1849507,OMIM:266120,Orphanet:35120] |
|
rs104894029
|
Pathogenic |
Hemolytic anemia due to pyrimidine 5' nucleotidase deficiency [MONDO:MONDO:0009946,MedGen:C1849507,OMIM:266120,Orphanet:35120] |
|
rs1126673
|
- |
- |
|
rs1135640
|
- |
- |
|
rs118204090
|
Pathogenic |
Acyl-CoA oxidase deficiency [MONDO:MONDO:0009919,MedGen:C1849678,OMIM:264470,Orphanet:2971] |
|
rs118204091
|
- |
- |
|
rs118204091
|
Pathogenic |
Acyl-CoA oxidase deficiency [MONDO:MONDO:0009919,MedGen:C1849678,OMIM:264470,Orphanet:2971] |
|
rs118204092
|
Pathogenic |
Acyl-CoA oxidase deficiency [MONDO:MONDO:0009919,MedGen:C1849678,OMIM:264470,Orphanet:2971] |
|
rs1202368985
|
- |
- |
|
rs1229984
|
LB/B |
- |
|
rs137853096
|
LP/P |
D-bifunctional protein deficiency (DBPD) [MIM:261515] |
|
rs137853101
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs137853102
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs1392361503
|
Pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs1471862905
|
- |
- |
|
rs149408684
|
- |
- |
|
rs1561442127
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs1567876984
|
Pathogenic/Likely pathogenic |
ACOX1-related condition|Mitchell syndrome|not provided|ACOX1-related disorders|Acyl-CoA oxidase deficiency|Inborn genetic diseases [|MONDO:MONDO:0030073,MedGen:C5394554,OMIM:618960|MedGen:C3661900||MONDO:MONDO:0009919,MedGen:C1849678,OMIM:264470,Orphanet:2971|MeSH:D030342,MedGen:C0950123] |
|
rs201934016
|
- |
- |
|
rs2066702
|
LB/B |
- |
|
rs28730628
|
LB/B |
- |
|
rs35385902
|
LB/B |
- |
|
rs367861880
|
- |
- |
|
rs371834662
|
- |
- |
|
rs3744032
|
- |
- |
|
rs377699817
|
- |
- |
|
rs550705310
|
- |
- |
|
rs56251804
|
- |
- |
|
rs574370650
|
- |
- |
|
rs577954688
|
- |
- |
|
rs74428123
|
- |
- |
|
rs74451421
|
- |
- |
|
rs747209153
|
- |
- |
|
rs750389182
|
- |
- |
|
rs75967634
|
- |
- |
|
rs761042153
|
- |
- |
|
rs763392896
|
- |
- |
|
rs765408826
|
- |
- |
|
rs768697532
|
- |
- |
|
rs769763635
|
- |
- |
|
rs779135938
|
Likely pathogenic |
Deficiency of 3-hydroxyacyl-CoA dehydrogenase|Hyperinsulinemic hypoglycemia|Hyperinsulinemic hypoglycemia, familial, 4 [MONDO:MONDO:0017715,MedGen:C1291230,OMIM:231530,Orphanet:309127,Orphanet:71212|Human Phenotype Ontology:HP:0000825,MONDO:MONDO:0005803,MedGen:C1864903,OMIM:PS256450,Orphanet:443095|MONDO:MONDO:0012382,MedGen:C1864948,OMIM:609975,Orphanet:71212] |
|
rs886037927
|
Likely pathogenic |
HSD10 mitochondrial disease [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295] |
hsa00600
|
Sphingolipid metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
GM1-gangliosidosis 1 (GM1G1) [MIM:230500] |
|
-
|
Pathogenic |
Infantile GM1 gangliosidosis|Mucopolysaccharidosis, MPS-IV-B [MONDO:MONDO:0009260,MedGen:C0268271,OMIM:230500,Orphanet:354,Orphanet:79255|MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582]; GM1 gangliosidosis [MONDO:MONDO:0018149,MedGen:C0085131,Orphanet:354] |
|
-
|
LP/P |
GM1-gangliosidosis 2 (GM1G2) [MIM:230600] |
|
-
|
LP/P |
Gaucher disease 1 (GD1) [MIM:230800] |
|
-
|
LP/P |
Gaucher disease 2 (GD2) [MIM:230900] |
|
-
|
Likely pathogenic |
Galactosylceramide beta-galactosidase deficiency [MONDO:MONDO:0009499,MedGen:C0023521,OMIM:245200,Orphanet:487] |
|
-
|
Pathogenic |
GM1 gangliosidosis [MONDO:MONDO:0018149,MedGen:C0085131,Orphanet:354]; Mucopolysaccharidosis, MPS-IV-B [MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582] |
|
-
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
-
|
Pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
.
|
- |
- |
|
rs104894832
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs104894840
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs104894841
|
Pathogenic |
Fabry disease|not provided [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324|MedGen:C3661900] |
|
rs104894845
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs1057521047
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs1064651
|
- |
- |
|
rs1064651
|
LP/P |
Gaucher disease 1 (GD1) [MIM:230800] |
|
rs1064651
|
Pathogenic/Likely pathogenic |
Gaucher disease-ophthalmoplegia-cardiovascular calcification syndrome|Gaucher disease type I|Gaucher disease type II|Gaucher disease type III|Gaucher disease perinatal lethal|Gaucher disease|not provided|7 conditions|Gaucher disease type II [MONDO:MONDO:0009268,MedGen:C1856476,OMIM:231005,Orphanet:2072|MONDO:MONDO:0009265,MedGen:C1961835,OMIM:230800,Orphanet:355,Orphanet:77259|MONDO:MONDO:0009266,MedGen:C0268250,OMIM:230900,Orphanet:77260|MONDO:MONDO:0009267,MedGen:C0268251,OMIM:231000,Orphanet:355,Orphanet:77261|MONDO:MONDO:0011945,MedGen:C1842704,OMIM:608013,Orphanet:85212|MONDO:MONDO:0018150,MedGen:C0017205,Orphanet:355|MedGen:C3661900|7 conditions|MONDO:MONDO:0009266,MedGen:C0268250,OMIM:230900,Orphanet:77260]; Gaucher disease type III [MONDO:MONDO:0009267,MedGen:C0268251,OMIM:231000,Orphanet:355,Orphanet:77261]; Gaucher disease type I [MONDO:MONDO:0009265,MedGen:C1961835,OMIM:230800,Orphanet:355,Orphanet:77259]; Gaucher disease-ophthalmoplegia-cardiovascular calcification syndrome|Parkinson disease, late-onset|Inborn genetic diseases [MONDO:MONDO:0009268,MedGen:C1856476,OMIM:231005,Orphanet:2072|MONDO:MONDO:0008199,MedGen:C3160718,OMIM:168600,Orphanet:411602|MeSH:D030342,MedGen:C0950123] |
|
rs113173389
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs1141811
|
LP/P |
Gaucher disease 1 (GD1) [MIM:230800] |
|
rs1183869568
|
Pathogenic |
not provided|Fabry disease [MedGen:C3661900|Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs119482081
|
LP/P |
Neuropathy, hereditary sensory and autonomic, 1A (HSAN1A) [MIM:162400] |
|
rs119482082
|
LP/P |
Neuropathy, hereditary sensory and autonomic, 1A (HSAN1A) [MIM:162400] |
|
rs1378338444
|
Pathogenic/Likely pathogenic |
GM1 gangliosidosis type 3 [MONDO:MONDO:0009262,MedGen:C0268273,OMIM:230650,Orphanet:79257]; Infantile GM1 gangliosidosis [MONDO:MONDO:0009260,MedGen:C0268271,OMIM:230500,Orphanet:354,Orphanet:79255]; GM1 gangliosidosis type 2|GM1 gangliosidosis [MONDO:MONDO:0009261,MedGen:C0268272,OMIM:230600,Orphanet:354,Orphanet:79256|MONDO:MONDO:0018149,MedGen:C0085131,Orphanet:354]; Mucopolysaccharidosis, MPS-IV-B [MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582] |
|
rs144173415
|
- |
- |
|
rs1478697086
|
Likely pathogenic |
Galactosylceramide beta-galactosidase deficiency [MONDO:MONDO:0009499,MedGen:C0023521,OMIM:245200,Orphanet:487] |
|
rs1553612220
|
LP/P |
Mucopolysaccharidosis 4B (MPS4B) [MIM:253010] |
|
rs1555384318
|
Pathogenic |
Galactosylceramide beta-galactosidase deficiency [MONDO:MONDO:0009499,MedGen:C0023521,OMIM:245200,Orphanet:487] |
|
rs1699002261
|
Likely pathogenic |
GM1 gangliosidosis type 3 [MONDO:MONDO:0009262,MedGen:C0268273,OMIM:230650,Orphanet:79257]; GM1 gangliosidosis type 2 [MONDO:MONDO:0009261,MedGen:C0268272,OMIM:230600,Orphanet:354,Orphanet:79256]; Infantile GM1 gangliosidosis [MONDO:MONDO:0009260,MedGen:C0268271,OMIM:230500,Orphanet:354,Orphanet:79255] |
|
rs1699791081
|
Likely pathogenic |
GM1 gangliosidosis [MONDO:MONDO:0018149,MedGen:C0085131,Orphanet:354]; Mucopolysaccharidosis, MPS-IV-B [MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582] |
|
rs186544262
|
- |
- |
|
rs1886145312
|
Likely pathogenic |
Galactosylceramide beta-galactosidase deficiency [MONDO:MONDO:0009499,MedGen:C0023521,OMIM:245200,Orphanet:487] |
|
rs1887277350
|
Likely pathogenic |
Galactosylceramide beta-galactosidase deficiency [MONDO:MONDO:0009499,MedGen:C0023521,OMIM:245200,Orphanet:487] |
|
rs1928137126
|
Likely pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs1928189534
|
Pathogenic |
Fabry disease|not provided [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324|MedGen:C3661900] |
|
rs1928195468
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs1928326804
|
Pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs1928406948
|
Likely pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs2139759522
|
Likely pathogenic |
Galactosylceramide beta-galactosidase deficiency [MONDO:MONDO:0009499,MedGen:C0023521,OMIM:245200,Orphanet:487] |
|
rs2140001660
|
Pathogenic |
Galactosylceramide beta-galactosidase deficiency [MONDO:MONDO:0009499,MedGen:C0023521,OMIM:245200,Orphanet:487] |
|
rs2147480697
|
Likely pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs28935487
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs28935491
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs28935492
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs370107958
|
Likely pathogenic |
not specified|Mucopolysaccharidosis, MPS-IV-B [MedGen:CN169374|MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582] |
|
rs376663785
|
LP/P |
GM1-gangliosidosis 3 (GM1G3) [MIM:230650] |
|
rs376663785
|
Pathogenic/Likely pathogenic |
not provided|Inborn genetic diseases|Mucopolysaccharidosis, MPS-IV-B [MedGen:C3661900|MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582]; GM1 gangliosidosis|GM1 gangliosidosis type 2 [MONDO:MONDO:0018149,MedGen:C0085131,Orphanet:354|MONDO:MONDO:0009261,MedGen:C0268272,OMIM:230600,Orphanet:354,Orphanet:79256]; Infantile GM1 gangliosidosis [MONDO:MONDO:0009260,MedGen:C0268271,OMIM:230500,Orphanet:354,Orphanet:79255]; Mucopolysaccharidosis, MPS-IV-B [MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582]; GM1 gangliosidosis type 3|Mucopolysaccharidosis, MPS-IV-B|GLB1-Related Disorders [MONDO:MONDO:0009262,MedGen:C0268273,OMIM:230650,Orphanet:79257|MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582|MedGen:CN169666] |
|
rs398123221
|
Pathogenic |
not provided|Fabry disease [MedGen:C3661900|Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs72555362
|
LP/P |
Mucopolysaccharidosis 4B (MPS4B) [MIM:253010] |
|
rs72555364
|
LP/P |
Mucopolysaccharidosis 4B (MPS4B) [MIM:253010] |
|
rs727505292
|
US |
Fabry disease (FD) [MIM:301500] |
|
rs730880451
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs745620101
|
Pathogenic/Likely pathogenic |
Galactosylceramide beta-galactosidase deficiency|not provided [MONDO:MONDO:0009499,MedGen:C0023521,OMIM:245200,Orphanet:487|MedGen:C3661900] |
|
rs748242677
|
- |
- |
|
rs755265316
|
Likely pathogenic |
Gaucher disease type II|not provided [MONDO:MONDO:0009266,MedGen:C0268250,OMIM:230900,Orphanet:77260|MedGen:C3661900] |
|
rs770485731
|
Pathogenic |
Galactosylceramide beta-galactosidase deficiency|Inborn genetic diseases|not provided [MONDO:MONDO:0009499,MedGen:C0023521,OMIM:245200,Orphanet:487|MeSH:D030342,MedGen:C0950123|MedGen:C3661900] |
|
rs77369218
|
LP/P |
Gaucher disease 3 (GD3) [MIM:231000] |
|
rs77369218
|
Likely pathogenic |
Gaucher disease type III|Gaucher disease|Gaucher disease type I [MONDO:MONDO:0009267,MedGen:C0268251,OMIM:231000,Orphanet:355,Orphanet:77261|MONDO:MONDO:0018150,MedGen:C0017205,Orphanet:355|MONDO:MONDO:0009265,MedGen:C1961835,OMIM:230800,Orphanet:355,Orphanet:77259] |
|
rs77829017
|
LP/P |
Gaucher disease (GD) [MIM:230800] |
|
rs782085638
|
Pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs797044727
|
Likely pathogenic |
Fabry disease|not provided [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324|MedGen:C3661900] |
|
rs797044749
|
Pathogenic/Likely pathogenic |
Fabry disease|not provided|Cardiovascular phenotype [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324|MedGen:C3661900|MedGen:CN230736] |
|
rs869312153
|
US |
Fabry disease (FD) [MIM:301500] |
|
rs869312160
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312161
|
US |
Fabry disease (FD) [MIM:301500] |
|
rs869312214
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312218
|
Pathogenic |
Fabry disease|not provided [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324|MedGen:C3661900] |
|
rs869312254
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312255
|
Likely pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs869312256
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312270
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312317
|
Likely pathogenic |
Fabry disease|not provided [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324|MedGen:C3661900] |
|
rs869312318
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312393
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312396
|
Likely pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs869312407
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312408
|
Likely pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs879050821
|
LP/P |
GM1-gangliosidosis 1 (GM1G1) [MIM:230500] |
|
rs886041315
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs886042057
|
Pathogenic/Likely pathogenic |
Galactosylceramide beta-galactosidase deficiency|not provided [MONDO:MONDO:0009499,MedGen:C0023521,OMIM:245200,Orphanet:487|MedGen:C3661900] |
|
rs886042079
|
LB/B |
- |
|
rs886042079
|
Likely pathogenic |
Infantile GM1 gangliosidosis [MONDO:MONDO:0009260,MedGen:C0268271,OMIM:230500,Orphanet:354,Orphanet:79255] |
|
rs886044843
|
Pathogenic/Likely pathogenic |
not provided|Fabry disease [MedGen:C3661900|Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs886044845
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs968221254
|
LP/P |
Mucopolysaccharidosis 4B (MPS4B) [MIM:253010] |
hsa00603
|
Glycosphingolipid biosynthesis - globo and isoglobo series
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
-
|
Pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
.
|
- |
- |
|
rs104894832
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs104894840
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs104894841
|
Pathogenic |
Fabry disease|not provided [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324|MedGen:C3661900] |
|
rs104894845
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs1057521047
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs113173389
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs1183869568
|
Pathogenic |
not provided|Fabry disease [MedGen:C3661900|Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs1392697327
|
- |
- |
|
rs1928137126
|
Likely pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs1928189534
|
Pathogenic |
Fabry disease|not provided [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324|MedGen:C3661900] |
|
rs1928195468
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs1928326804
|
Pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs1928406948
|
Likely pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs2147480697
|
Likely pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs28935487
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs28935491
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs28935492
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs398123221
|
Pathogenic |
not provided|Fabry disease [MedGen:C3661900|Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs727505292
|
US |
Fabry disease (FD) [MIM:301500] |
|
rs730880451
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs782085638
|
Pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs797044727
|
Likely pathogenic |
Fabry disease|not provided [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324|MedGen:C3661900] |
|
rs797044749
|
Pathogenic/Likely pathogenic |
Fabry disease|not provided|Cardiovascular phenotype [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324|MedGen:C3661900|MedGen:CN230736] |
|
rs869312153
|
US |
Fabry disease (FD) [MIM:301500] |
|
rs869312160
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312161
|
US |
Fabry disease (FD) [MIM:301500] |
|
rs869312214
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312218
|
Pathogenic |
Fabry disease|not provided [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324|MedGen:C3661900] |
|
rs869312254
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312255
|
Likely pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs869312256
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312270
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312317
|
Likely pathogenic |
Fabry disease|not provided [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324|MedGen:C3661900] |
|
rs869312318
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312393
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312396
|
Likely pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs869312407
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs869312408
|
Likely pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs886041315
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs886044843
|
Pathogenic/Likely pathogenic |
not provided|Fabry disease [MedGen:C3661900|Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs886044845
|
LP/P |
Fabry disease (FD) [MIM:301500] |
hsa00604
|
Glycosphingolipid biosynthesis - ganglio series
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
GM1-gangliosidosis 1 (GM1G1) [MIM:230500] |
|
-
|
Pathogenic |
Infantile GM1 gangliosidosis|Mucopolysaccharidosis, MPS-IV-B [MONDO:MONDO:0009260,MedGen:C0268271,OMIM:230500,Orphanet:354,Orphanet:79255|MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582]; GM1 gangliosidosis [MONDO:MONDO:0018149,MedGen:C0085131,Orphanet:354] |
|
-
|
LP/P |
GM1-gangliosidosis 2 (GM1G2) [MIM:230600] |
|
-
|
Pathogenic |
GM1 gangliosidosis [MONDO:MONDO:0018149,MedGen:C0085131,Orphanet:354]; Mucopolysaccharidosis, MPS-IV-B [MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582] |
|
.
|
- |
- |
|
rs1378338444
|
Pathogenic/Likely pathogenic |
GM1 gangliosidosis type 3 [MONDO:MONDO:0009262,MedGen:C0268273,OMIM:230650,Orphanet:79257]; Infantile GM1 gangliosidosis [MONDO:MONDO:0009260,MedGen:C0268271,OMIM:230500,Orphanet:354,Orphanet:79255]; GM1 gangliosidosis type 2|GM1 gangliosidosis [MONDO:MONDO:0009261,MedGen:C0268272,OMIM:230600,Orphanet:354,Orphanet:79256|MONDO:MONDO:0018149,MedGen:C0085131,Orphanet:354]; Mucopolysaccharidosis, MPS-IV-B [MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582] |
|
rs1553612220
|
LP/P |
Mucopolysaccharidosis 4B (MPS4B) [MIM:253010] |
|
rs1699002261
|
Likely pathogenic |
GM1 gangliosidosis type 3 [MONDO:MONDO:0009262,MedGen:C0268273,OMIM:230650,Orphanet:79257]; GM1 gangliosidosis type 2 [MONDO:MONDO:0009261,MedGen:C0268272,OMIM:230600,Orphanet:354,Orphanet:79256]; Infantile GM1 gangliosidosis [MONDO:MONDO:0009260,MedGen:C0268271,OMIM:230500,Orphanet:354,Orphanet:79255] |
|
rs1699791081
|
Likely pathogenic |
GM1 gangliosidosis [MONDO:MONDO:0018149,MedGen:C0085131,Orphanet:354]; Mucopolysaccharidosis, MPS-IV-B [MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582] |
|
rs370107958
|
Likely pathogenic |
not specified|Mucopolysaccharidosis, MPS-IV-B [MedGen:CN169374|MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582] |
|
rs376663785
|
LP/P |
GM1-gangliosidosis 3 (GM1G3) [MIM:230650] |
|
rs376663785
|
Pathogenic/Likely pathogenic |
not provided|Inborn genetic diseases|Mucopolysaccharidosis, MPS-IV-B [MedGen:C3661900|MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582]; GM1 gangliosidosis|GM1 gangliosidosis type 2 [MONDO:MONDO:0018149,MedGen:C0085131,Orphanet:354|MONDO:MONDO:0009261,MedGen:C0268272,OMIM:230600,Orphanet:354,Orphanet:79256]; Infantile GM1 gangliosidosis [MONDO:MONDO:0009260,MedGen:C0268271,OMIM:230500,Orphanet:354,Orphanet:79255]; Mucopolysaccharidosis, MPS-IV-B [MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582]; GM1 gangliosidosis type 3|Mucopolysaccharidosis, MPS-IV-B|GLB1-Related Disorders [MONDO:MONDO:0009262,MedGen:C0268273,OMIM:230650,Orphanet:79257|MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582|MedGen:CN169666] |
|
rs72555362
|
LP/P |
Mucopolysaccharidosis 4B (MPS4B) [MIM:253010] |
|
rs72555364
|
LP/P |
Mucopolysaccharidosis 4B (MPS4B) [MIM:253010] |
|
rs879050821
|
LP/P |
GM1-gangliosidosis 1 (GM1G1) [MIM:230500] |
|
rs886042079
|
LB/B |
- |
|
rs886042079
|
Likely pathogenic |
Infantile GM1 gangliosidosis [MONDO:MONDO:0009260,MedGen:C0268271,OMIM:230500,Orphanet:354,Orphanet:79255] |
|
rs968221254
|
LP/P |
Mucopolysaccharidosis 4B (MPS4B) [MIM:253010] |
hsa00620
|
Pyruvate metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
Pathogenic |
Paragangliomas 1 [MONDO:MONDO:0008192,MedGen:C3494181,OMIM:168000,Orphanet:29072] |
|
-
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
-
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
-
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type II|not provided [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599|MedGen:C3661900] |
|
-
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
-
|
LP/P |
Pyruvate kinase deficiency of red cells (PKRD) [MIM:266200] |
|
-
|
Pathogenic/Likely pathogenic |
not provided|Pyruvate kinase deficiency of red cells [MedGen:C3661900|MONDO:MONDO:0009950,MedGen:C0340968,OMIM:266200,Orphanet:766] |
|
-
|
LP/P |
Pyruvate dehydrogenase E1-alpha deficiency (PDHAD) [MIM:312170] |
|
-
|
Pathogenic |
Glycogen storage disease due to lactate dehydrogenase M-subunit deficiency [MONDO:MONDO:0013047,MedGen:C2931743,OMIM:612933,Orphanet:284426] |
|
-
|
Likely pathogenic |
Pyruvate dehydrogenase E1-beta deficiency [MONDO:MONDO:0013580,MedGen:C3279841,OMIM:614111,Orphanet:255138,Orphanet:765] |
|
-
|
LP/P |
Microphthalmia, isolated, 8 (MCOP8) [MIM:615113] |
|
-
|
Likely pathogenic |
Isolated microphthalmia 8 [MONDO:MONDO:0014050,MedGen:C3554524,OMIM:615113,Orphanet:2542] |
|
.
|
- |
- |
|
rs1018955701
|
- |
- |
|
rs1041969
|
LB/B |
- |
|
rs104894302
|
Pathogenic |
Paragangliomas 1|Hereditary cancer-predisposing syndrome|Paragangliomas with sensorineural hearing loss [MONDO:MONDO:0008192,MedGen:C3494181,OMIM:168000,Orphanet:29072|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MedGen:C1868633]; Cowden syndrome 3 [MONDO:MONDO:0014045,MedGen:CN166604,Orphanet:201]; Pheochromocytoma [Human Phenotype Ontology:HP:0002666,MONDO:MONDO:0008233,MedGen:C0031511,OMIM:171300,Orphanet:29072]; Carney-Stratakis syndrome [MONDO:MONDO:0011740,MedGen:C1847319,OMIM:606864,Orphanet:97286] |
|
rs1060503769
|
Pathogenic |
Carney-Stratakis syndrome [MONDO:MONDO:0011740,MedGen:C1847319,OMIM:606864,Orphanet:97286]; Pheochromocytoma [Human Phenotype Ontology:HP:0002666,MONDO:MONDO:0008233,MedGen:C0031511,OMIM:171300,Orphanet:29072]; Cowden syndrome 3 [MONDO:MONDO:0014045,MedGen:CN166604,Orphanet:201]; Paragangliomas with sensorineural hearing loss|Hereditary cancer-predisposing syndrome [MedGen:C1868633|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] |
|
rs1126673
|
- |
- |
|
rs1131691065
|
Pathogenic |
Hereditary cancer-predisposing syndrome|Pheochromocytoma [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0002666,MONDO:MONDO:0008233,MedGen:C0031511,OMIM:171300,Orphanet:29072]; Paragangliomas with sensorineural hearing loss [MedGen:C1868633]; Cowden syndrome 3 [MONDO:MONDO:0014045,MedGen:CN166604,Orphanet:201]; Carney-Stratakis syndrome|Mitochondrial complex 2 deficiency, nuclear type 3 [MONDO:MONDO:0011740,MedGen:C1847319,OMIM:606864,Orphanet:97286|MONDO:MONDO:0030937,MedGen:C5436934,OMIM:619167] |
|
rs115638369
|
- |
- |
|
rs1166067966
|
- |
- |
|
rs1167329263
|
- |
- |
|
rs1167329263
|
LP/P |
Pyruvate kinase deficiency of red cells (PKRD) [MIM:266200] |
|
rs1168600424
|
- |
- |
|
rs1170817007
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs118204083
|
LP/P |
Pyruvate kinase deficiency of red cells (PKRD) [MIM:266200] |
|
rs118204089
|
Pathogenic |
Pyruvate kinase deficiency of red cells [MONDO:MONDO:0009950,MedGen:C0340968,OMIM:266200,Orphanet:766] |
|
rs1193034540
|
- |
- |
|
rs120074141
|
LP/P |
3-ketothiolase deficiency (3KTD) [MIM:203750] |
|
rs1209918450
|
- |
- |
|
rs1213395414
|
- |
- |
|
rs121912707
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Seizure|Pyridoxine-dependent epilepsy caused by ALDH7A1 mutant [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|Human Phenotype Ontology:HP:0001250,Human Phenotype Ontology:HP:0001275,Human Phenotype Ontology:HP:0001303,Human Phenotype Ontology:HP:0002125,Human Phenotype Ontology:HP:0002182,Human Phenotype Ontology:HP:0002279,Human Phenotype Ontology:HP:0002306,Human Phenotype Ontology:HP:0002348,Human Phenotype Ontology:HP:0002391,Human Phenotype Ontology:HP:0002417,Human Phenotype Ontology:HP:0002430,Human Phenotype Ontology:HP:0002431,Human Phenotype Ontology:HP:0002432,Human Phenotype Ontology:HP:0002434,Human Phenotype Ontology:HP:0002437,Human Phenotype Ontology:HP:0002466,Human Phenotype Ontology:HP:0002479,Human Phenotype Ontology:HP:0002794,Human Phenotype Ontology:HP:0006997,Human Phenotype Ontology:HP:0010520,MedGen:C0036572|MONDO:MONDO:0020741,MedGen:CN293409] |
|
rs121912711
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs121964988
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs121964991
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs121964993
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs1227427396
|
LP/P |
Pyruvate kinase deficiency of red cells (PKRD) [MIM:266200] |
|
rs1229984
|
LB/B |
- |
|
rs1239029841
|
LP/P |
Pyruvate kinase deficiency of red cells (PKRD) [MIM:266200] |
|
rs1256830271
|
- |
- |
|
rs1258494752
|
LP/P |
Pyruvate carboxylase deficiency (PC deficiency) [MIM:266150] |
|
rs1263528770
|
- |
- |
|
rs1272572107
|
Pathogenic/Likely pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs1272792336
|
- |
- |
|
rs1304729997
|
- |
- |
|
rs1311982393
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1327662246
|
- |
- |
|
rs1331843613
|
- |
- |
|
rs1348837644
|
- |
- |
|
rs1357271377
|
US |
A colorectal cancer sample |
|
rs1358193875
|
- |
- |
|
rs137853258
|
LP/P |
Pyruvate dehydrogenase E1-alpha deficiency (PDHAD) [MIM:312170] |
|
rs138887023
|
- |
- |
|
rs139273956
|
- |
- |
|
rs1423978863
|
Pathogenic |
Hereditary cancer-predisposing syndrome|Mitochondrial complex II deficiency, nuclear type 1 [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0100294,MedGen:C5700310,OMIM:252011,Orphanet:3208]; Paragangliomas 5 [MONDO:MONDO:0013602,MedGen:C3279992,OMIM:614165,Orphanet:29072] |
|
rs1437567292
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs144739734
|
- |
- |
|
rs146556418
|
- |
- |
|
rs1466627565
|
- |
- |
|
rs1471862905
|
- |
- |
|
rs147495819
|
- |
- |
|
rs149408684
|
- |
- |
|
rs150526754
|
- |
- |
|
rs150939574
|
- |
- |
|
rs1555015018
|
Likely pathogenic |
Pyruvate carboxylase deficiency [MONDO:MONDO:0009949,MedGen:C0034341,OMIM:266150,Orphanet:3008] |
|
rs1555933963
|
Pathogenic/Likely pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency|not provided|Pyruvate dehydrogenase complex deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243|MedGen:C3661900|MONDO:MONDO:0019169,MedGen:C0034345,OMIM:PS312170,Orphanet:765,Orphanet:79243] |
|
rs1560992565
|
Pathogenic |
Mitochondrial complex II deficiency, nuclear type 1 [MONDO:MONDO:0100294,MedGen:C5700310,OMIM:252011,Orphanet:3208]; Paragangliomas 5|Hereditary cancer-predisposing syndrome|Paragangliomas 5 [MONDO:MONDO:0013602,MedGen:C3279992,OMIM:614165,Orphanet:29072|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0013602,MedGen:C3279992,OMIM:614165,Orphanet:29072] |
|
rs1591374629
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1591374632
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs16952692
|
LB/B |
- |
|
rs1750309299
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1750388096
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs17853396
|
LB/B |
- |
|
rs17855424
|
LB/B |
- |
|
rs180177312
|
Likely pathogenic |
Primary hyperoxaluria, type II [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599] |
|
rs180177314
|
Pathogenic |
Primary hyperoxaluria, type II|Primary hyperoxaluria|not provided [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416|MedGen:C3661900] |
|
rs180177322
|
- |
- |
|
rs180177322
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type II|not provided [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599|MedGen:C3661900] |
|
rs180177323
|
Likely pathogenic |
Primary hyperoxaluria, type II [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599] |
|
rs1823086297
|
Likely pathogenic |
Primary hyperoxaluria, type II [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599] |
|
rs184074326
|
- |
- |
|
rs199518994
|
- |
- |
|
rs199564842
|
- |
- |
|
rs199624420
|
- |
- |
|
rs200000745
|
- |
- |
|
rs200969445
|
Pathogenic |
Oligosynaptic infertility|Azoospermia|Spermatogenic failure 70 [MONDO:MONDO:0009776,MedGen:C0403810,OMIM:258150,Orphanet:217034|Human Phenotype Ontology:HP:0000027,MONDO:MONDO:0100459,MeSH:D053713,MedGen:C0004509|MONDO:MONDO:0030733,MedGen:C5676962,OMIM:619828] |
|
rs201321507
|
- |
- |
|
rs201745983
|
- |
- |
|
rs201934016
|
- |
- |
|
rs201948406
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Inborn genetic diseases [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs202015012
|
- |
- |
|
rs202226446
|
- |
- |
|
rs2032247686
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs2032282970
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs2063174067
|
LP/P |
Pyruvate dehydrogenase E1-alpha deficiency (PDHAD) [MIM:312170] |
|
rs2063189233
|
Pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs2063213272
|
Pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs2066702
|
LB/B |
- |
|
rs2134768688
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs2134768866
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs2147176072
|
Likely pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs2147178249
|
Pathogenic |
not provided|Pyruvate dehydrogenase E1-alpha deficiency [MedGen:C3661900|MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs2147180839
|
Likely pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs2147180851
|
Likely pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs2147184502
|
Likely pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs2458502
|
- |
- |
|
rs28359542
|
LB/B |
- |
|
rs28383586
|
LB/B |
- |
|
rs284797
|
- |
- |
|
rs28730628
|
LB/B |
- |
|
rs28940589
|
LP/P |
Pyruvate carboxylase deficiency (PC deficiency) [MIM:266150] |
|
rs28940590
|
LP/P |
Pyruvate carboxylase deficiency (PC deficiency) [MIM:266150] |
|
rs35229514
|
- |
- |
|
rs35385902
|
LB/B |
- |
|
rs367861880
|
- |
- |
|
rs371807385
|
- |
- |
|
rs371834662
|
- |
- |
|
rs372660425
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs374118874
|
- |
- |
|
rs376297762
|
- |
- |
|
rs377699817
|
- |
- |
|
rs539728659
|
- |
- |
|
rs541517496
|
Pathogenic/Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs546847108
|
- |
- |
|
rs547918064
|
- |
- |
|
rs547918064
|
Likely pathogenic |
not provided|Isolated microphthalmia 8 [MedGen:C3661900|MONDO:MONDO:0014050,MedGen:C3554524,OMIM:615113,Orphanet:2542] |
|
rs56251804
|
- |
- |
|
rs573040804
|
- |
- |
|
rs671
|
- |
- |
|
rs671
|
LP/P |
AMED syndrome, digenic (AMEDS) [MIM:619151] |
|
rs74451421
|
- |
- |
|
rs747097960
|
LP/P |
Pyruvate kinase deficiency of red cells (PKRD) [MIM:266200] |
|
rs747209153
|
- |
- |
|
rs747837917
|
- |
- |
|
rs748303093
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of acetyl-CoA acetyltransferase [MedGen:C3661900|MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs748682601
|
Pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs748947397
|
- |
- |
|
rs750195919
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs750389182
|
- |
- |
|
rs753407393
|
- |
- |
|
rs753816946
|
- |
- |
|
rs755088747
|
- |
- |
|
rs755200974
|
- |
- |
|
rs755461904
|
- |
- |
|
rs755761896
|
- |
- |
|
rs757087726
|
Pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs75967634
|
- |
- |
|
rs760782027
|
- |
- |
|
rs760971491
|
- |
- |
|
rs761042153
|
- |
- |
|
rs761295869
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs763392896
|
- |
- |
|
rs767632371
|
- |
- |
|
rs767764544
|
- |
- |
|
rs768176085
|
- |
- |
|
rs768361068
|
- |
- |
|
rs768448235
|
- |
- |
|
rs768697532
|
- |
- |
|
rs769206685
|
- |
- |
|
rs769724893
|
LB/B |
- |
|
rs769763635
|
- |
- |
|
rs770028533
|
- |
- |
|
rs770807520
|
- |
- |
|
rs771107373
|
- |
- |
|
rs772238965
|
- |
- |
|
rs773503933
|
- |
- |
|
rs775156542
|
- |
- |
|
rs776400068
|
- |
- |
|
rs776421832
|
- |
- |
|
rs777019739
|
- |
- |
|
rs777679257
|
- |
- |
|
rs777954556
|
LP/P |
Lactate dehydrogenase B deficiency (LDHBD) [MIM:614128] |
|
rs779006912
|
- |
- |
|
rs779314973
|
- |
- |
|
rs781507152
|
- |
- |
|
rs781739244
|
- |
- |
|
rs782308462
|
LP/P |
Developmental and epileptic encephalopathy 51 (DEE51) [MIM:617339] |
|
rs786202403
|
Pathogenic/Likely pathogenic |
Hereditary cancer-predisposing syndrome|Pheochromocytoma [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0002666,MONDO:MONDO:0008233,MedGen:C0031511,OMIM:171300,Orphanet:29072]; Cowden syndrome 3 [MONDO:MONDO:0014045,MedGen:CN166604,Orphanet:201]; Carney-Stratakis syndrome [MONDO:MONDO:0011740,MedGen:C1847319,OMIM:606864,Orphanet:97286]; Paragangliomas with sensorineural hearing loss [MedGen:C1868633] |
|
rs786205145
|
Likely pathogenic |
Carney triad [MONDO:MONDO:0011424,MedGen:C1858592,OMIM:604287,Orphanet:139411] |
|
rs796052079
|
- |
- |
|
rs796052079
|
Pathogenic |
Primary hyperoxaluria, type II [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599] |
|
rs796052271
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs80338847
|
Pathogenic |
Paragangliomas 1|Hereditary pheochromocytoma-paraganglioma|not provided [MONDO:MONDO:0008192,MedGen:C3494181,OMIM:168000,Orphanet:29072|MONDO:MONDO:0017366,MedGen:C1708353,Orphanet:29072|MedGen:CN517202] |
|
rs80338847
|
Likely pathogenic |
Paragangliomas with sensorineural hearing loss [MedGen:C1868633]; Carney-Stratakis syndrome [MONDO:MONDO:0011740,MedGen:C1847319,OMIM:606864,Orphanet:97286]; Cowden syndrome 3 [MONDO:MONDO:0014045,MedGen:CN166604,Orphanet:201]; Pheochromocytoma [Human Phenotype Ontology:HP:0002666,MONDO:MONDO:0008233,MedGen:C0031511,OMIM:171300,Orphanet:29072] |
|
rs863224149
|
Pathogenic |
not provided|Pyruvate dehydrogenase E1-alpha deficiency [MedGen:C3661900|MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs863224150
|
Pathogenic |
not provided|Pyruvate dehydrogenase E1-alpha deficiency|Pyruvate dehydrogenase complex deficiency [MedGen:C3661900|MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243|MONDO:MONDO:0019169,MedGen:C0034345,OMIM:PS312170,Orphanet:765,Orphanet:79243] |
|
rs864622558
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs978865587
|
- |
- |
|
rs981505482
|
LP/P |
Pyruvate kinase deficiency of red cells (PKRD) [MIM:266200] |
rn00621
|
Dioxin degradation
|
dbSNP |
Type |
Disease name |
|
.
|
- |
- |
|
rs1041969
|
LB/B |
- |
|
rs1126673
|
- |
- |
|
rs1229984
|
LB/B |
- |
|
rs139273956
|
- |
- |
|
rs1471862905
|
- |
- |
|
rs149408684
|
- |
- |
|
rs150939574
|
- |
- |
|
rs201934016
|
- |
- |
|
rs2066702
|
LB/B |
- |
|
rs284797
|
- |
- |
|
rs28730628
|
LB/B |
- |
|
rs35229514
|
- |
- |
|
rs35385902
|
LB/B |
- |
|
rs367861880
|
- |
- |
|
rs377699817
|
- |
- |
|
rs539728659
|
- |
- |
|
rs56251804
|
- |
- |
|
rs74451421
|
- |
- |
|
rs747209153
|
- |
- |
|
rs750389182
|
- |
- |
|
rs75967634
|
- |
- |
|
rs761042153
|
- |
- |
|
rs763392896
|
- |
- |
|
rs768697532
|
- |
- |
|
rs769763635
|
- |
- |
rn00622
|
Xylene degradation
|
dbSNP |
Type |
Disease name |
|
.
|
- |
- |
|
rs1041969
|
LB/B |
- |
|
rs1126673
|
- |
- |
|
rs1229984
|
LB/B |
- |
|
rs139273956
|
- |
- |
|
rs1471862905
|
- |
- |
|
rs149408684
|
- |
- |
|
rs150939574
|
- |
- |
|
rs201934016
|
- |
- |
|
rs2066702
|
LB/B |
- |
|
rs284797
|
- |
- |
|
rs28730628
|
LB/B |
- |
|
rs35229514
|
- |
- |
|
rs35385902
|
LB/B |
- |
|
rs367861880
|
- |
- |
|
rs377699817
|
- |
- |
|
rs539728659
|
- |
- |
|
rs56251804
|
- |
- |
|
rs74451421
|
- |
- |
|
rs747209153
|
- |
- |
|
rs750389182
|
- |
- |
|
rs75967634
|
- |
- |
|
rs761042153
|
- |
- |
|
rs763392896
|
- |
- |
|
rs768697532
|
- |
- |
|
rs769763635
|
- |
- |
rn00623
|
Toluene degradation
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
.
|
- |
- |
|
rs104886492
|
US |
HSD10 mitochondrial disease (HSD10MD) [MIM:300438] |
|
rs1202368985
|
- |
- |
|
rs137853096
|
LP/P |
D-bifunctional protein deficiency (DBPD) [MIM:261515] |
|
rs137853101
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs137853102
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs1392361503
|
Pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs1561442127
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs550705310
|
- |
- |
|
rs577954688
|
- |
- |
|
rs74428123
|
- |
- |
|
rs779135938
|
Likely pathogenic |
Deficiency of 3-hydroxyacyl-CoA dehydrogenase|Hyperinsulinemic hypoglycemia|Hyperinsulinemic hypoglycemia, familial, 4 [MONDO:MONDO:0017715,MedGen:C1291230,OMIM:231530,Orphanet:309127,Orphanet:71212|Human Phenotype Ontology:HP:0000825,MONDO:MONDO:0005803,MedGen:C1864903,OMIM:PS256450,Orphanet:443095|MONDO:MONDO:0012382,MedGen:C1864948,OMIM:609975,Orphanet:71212] |
|
rs886037927
|
Likely pathogenic |
HSD10 mitochondrial disease [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295] |
rn00625
|
Chloroalkane and chloroalkene degradation
|
dbSNP |
Type |
Disease name |
|
-
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
.
|
- |
- |
|
rs1041969
|
LB/B |
- |
|
rs1126673
|
- |
- |
|
rs1170817007
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs121912707
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Seizure|Pyridoxine-dependent epilepsy caused by ALDH7A1 mutant [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|Human Phenotype Ontology:HP:0001250,Human Phenotype Ontology:HP:0001275,Human Phenotype Ontology:HP:0001303,Human Phenotype Ontology:HP:0002125,Human Phenotype Ontology:HP:0002182,Human Phenotype Ontology:HP:0002279,Human Phenotype Ontology:HP:0002306,Human Phenotype Ontology:HP:0002348,Human Phenotype Ontology:HP:0002391,Human Phenotype Ontology:HP:0002417,Human Phenotype Ontology:HP:0002430,Human Phenotype Ontology:HP:0002431,Human Phenotype Ontology:HP:0002432,Human Phenotype Ontology:HP:0002434,Human Phenotype Ontology:HP:0002437,Human Phenotype Ontology:HP:0002466,Human Phenotype Ontology:HP:0002479,Human Phenotype Ontology:HP:0002794,Human Phenotype Ontology:HP:0006997,Human Phenotype Ontology:HP:0010520,MedGen:C0036572|MONDO:MONDO:0020741,MedGen:CN293409] |
|
rs121912711
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs1229984
|
LB/B |
- |
|
rs1311982393
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1471862905
|
- |
- |
|
rs149408684
|
- |
- |
|
rs1750309299
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1750388096
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs200893629
|
- |
- |
|
rs201535183
|
- |
- |
|
rs201904403
|
- |
- |
|
rs201934016
|
- |
- |
|
rs201948406
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Inborn genetic diseases [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs2066702
|
LB/B |
- |
|
rs28730628
|
LB/B |
- |
|
rs35385902
|
LB/B |
- |
|
rs367861880
|
- |
- |
|
rs372660425
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs376158103
|
- |
- |
|
rs377699817
|
- |
- |
|
rs56251804
|
- |
- |
|
rs74451421
|
- |
- |
|
rs747209153
|
- |
- |
|
rs750389182
|
- |
- |
|
rs751141
|
LB/B |
- |
|
rs754312469
|
- |
- |
|
rs75967634
|
- |
- |
|
rs761042153
|
- |
- |
|
rs761295869
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs763392896
|
- |
- |
|
rs768697532
|
- |
- |
|
rs769763635
|
- |
- |
|
rs773503933
|
- |
- |
|
rs776421832
|
- |
- |
|
rs796052271
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs864622558
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
rn00626
|
Naphthalene degradation
|
dbSNP |
Type |
Disease name |
|
.
|
- |
- |
|
rs1041969
|
LB/B |
- |
|
rs1126673
|
- |
- |
|
rs1229984
|
LB/B |
- |
|
rs1471862905
|
- |
- |
|
rs149408684
|
- |
- |
|
rs201934016
|
- |
- |
|
rs2066702
|
LB/B |
- |
|
rs28730628
|
LB/B |
- |
|
rs35385902
|
LB/B |
- |
|
rs367861880
|
- |
- |
|
rs377699817
|
- |
- |
|
rs56251804
|
- |
- |
|
rs74451421
|
- |
- |
|
rs747209153
|
- |
- |
|
rs750389182
|
- |
- |
|
rs75967634
|
- |
- |
|
rs761042153
|
- |
- |
|
rs763392896
|
- |
- |
|
rs768697532
|
- |
- |
|
rs769763635
|
- |
- |
rn00627
|
Aminobenzoate degradation
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Deficiency of 3-hydroxyacyl-CoA dehydrogenase [MONDO:MONDO:0017715,MedGen:C1291230,OMIM:231530,Orphanet:309127,Orphanet:71212] |
|
-
|
Pathogenic |
Spondyloenchondrodysplasia with immune dysregulation [MONDO:MONDO:0011939,MedGen:C1842763,OMIM:607944,Orphanet:1855] |
|
.
|
- |
- |
|
rs1048988
|
LB/B |
- |
|
rs1048994
|
LB/B |
- |
|
rs1315885236
|
- |
- |
|
rs1328237103
|
- |
- |
|
rs13306698
|
- |
- |
|
rs137976988
|
- |
- |
|
rs1393887224
|
- |
- |
|
rs142179752
|
- |
- |
|
rs148550603
|
- |
- |
|
rs148586042
|
- |
- |
|
rs1486369797
|
- |
- |
|
rs17416141
|
- |
- |
|
rs183793479
|
- |
- |
|
rs199693212
|
- |
- |
|
rs200755203
|
- |
- |
|
rs2145087630
|
Pathogenic |
Spondyloenchondrodysplasia with immune dysregulation [MONDO:MONDO:0011939,MedGen:C1842763,OMIM:607944,Orphanet:1855] |
|
rs372014965
|
- |
- |
|
rs372045419
|
- |
- |
|
rs377376739
|
- |
- |
|
rs535738085
|
- |
- |
|
rs548817584
|
- |
- |
|
rs553481936
|
- |
- |
|
rs557557314
|
- |
- |
|
rs577954688
|
- |
- |
|
rs662
|
- |
- |
|
rs71421642
|
- |
- |
|
rs745352941
|
- |
- |
|
rs746133481
|
- |
- |
|
rs750269899
|
- |
- |
|
rs752838693
|
- |
- |
|
rs753036535
|
- |
- |
|
rs754829627
|
- |
- |
|
rs75920311
|
- |
- |
|
rs767122676
|
- |
- |
|
rs773782019
|
- |
- |
|
rs777305206
|
- |
- |
|
rs781050795
|
Pathogenic/Likely pathogenic |
Spondyloenchondrodysplasia with immune dysregulation|Inborn genetic diseases|ACP5-related condition [MONDO:MONDO:0011939,MedGen:C1842763,OMIM:607944,Orphanet:1855|MeSH:D030342,MedGen:C0950123|] |
|
rs854560
|
- |
- |
|
rs965741395
|
Pathogenic |
Spondyloenchondrodysplasia with immune dysregulation [MONDO:MONDO:0011939,MedGen:C1842763,OMIM:607944,Orphanet:1855] |
hsa00630
|
Glyoxylate and dicarboxylate metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
-
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
-
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
-
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type II|not provided [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599|MedGen:C3661900] |
|
-
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
-
|
Pathogenic |
Spongy degeneration of central nervous system [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141] |
|
-
|
Likely pathogenic |
Primary hyperoxaluria type 3 [MONDO:MONDO:0013327,MedGen:C3150878,OMIM:613616,Orphanet:416,Orphanet:93600] |
|
.
|
- |
- |
|
rs1014551540
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs104894550
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs104894551
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs104894553
|
- |
- |
|
rs104894553
|
Pathogenic/Likely pathogenic |
Mild Canavan disease|Spongy degeneration of central nervous system|not provided|Inborn genetic diseases [MONDO:MONDO:0017831,MedGen:C4017127,Orphanet:314918|MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs1057516995
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs115014558
|
LB/B |
- |
|
rs117195882
|
- |
- |
|
rs1176072053
|
- |
- |
|
rs1192320601
|
Likely pathogenic |
Spongy degeneration of central nervous system [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141] |
|
rs1193344118
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs120074141
|
LP/P |
3-ketothiolase deficiency (3KTD) [MIM:203750] |
|
rs1209918450
|
- |
- |
|
rs1213395414
|
- |
- |
|
rs121908520
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908521
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs121908522
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908522
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs121908524
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908524
|
Pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs121908526
|
- |
- |
|
rs121908526
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908527
|
- |
- |
|
rs121908527
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908528
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs121908529
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria|AGXT-related condition [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416|] |
|
rs121908530
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908530
|
Pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs121964988
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs121964991
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs121964993
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs1262762031
|
- |
- |
|
rs12948217
|
Pathogenic |
Spongy degeneration of central nervous system|not provided|Canavan Disease, Familial Form|Inborn genetic diseases [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141|MedGen:C3661900|MedGen:C0751663|MeSH:D030342,MedGen:C0950123] |
|
rs1305400916
|
- |
- |
|
rs1327662246
|
- |
- |
|
rs13408961
|
LB/B |
- |
|
rs1357271377
|
US |
A colorectal cancer sample |
|
rs138025751
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs138207257
|
LP/P |
Hyperoxaluria primary 3 (HP3) [MIM:613616] |
|
rs140992177
|
LB/B |
- |
|
rs1414684396
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs142114432
|
- |
- |
|
rs1437567292
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1446467099
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs147763700
|
Likely pathogenic |
Spongy degeneration of central nervous system [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141] |
|
rs1555538148
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs1555538151
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs1591374629
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1591374632
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1597439028
|
Pathogenic |
Spongy degeneration of central nervous system|Inborn genetic diseases [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141|MeSH:D030342,MedGen:C0950123] |
|
rs180177155
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177156
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177156
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs180177157
|
- |
- |
|
rs180177157
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177161
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177162
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177163
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177173
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177181
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177182
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177184
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177184
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs180177185
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177186
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177189
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177191
|
- |
- |
|
rs180177191
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177195
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177197
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177198
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177199
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177202
|
Pathogenic |
Primary hyperoxaluria, type I|Primary hyperoxaluria|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416|MedGen:C3661900] |
|
rs180177203
|
Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177208
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177210
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177211
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177214
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177217
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177225
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177236
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177238
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs180177243
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177244
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177247
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177248
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177248
|
Pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs180177250
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177252
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177253
|
- |
- |
|
rs180177253
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177259
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177262
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177263
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177264
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177269
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177272
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177277
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177279
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177284
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177287
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177288
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177289
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177290
|
- |
- |
|
rs180177290
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177292
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177303
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177312
|
Likely pathogenic |
Primary hyperoxaluria, type II [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599] |
|
rs180177314
|
Pathogenic |
Primary hyperoxaluria, type II|Primary hyperoxaluria|not provided [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416|MedGen:C3661900] |
|
rs180177322
|
- |
- |
|
rs180177322
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type II|not provided [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599|MedGen:C3661900] |
|
rs180177323
|
Likely pathogenic |
Primary hyperoxaluria, type II [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599] |
|
rs1823086297
|
Likely pathogenic |
Primary hyperoxaluria, type II [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599] |
|
rs189919790
|
- |
- |
|
rs200529020
|
Likely pathogenic |
Primary hyperoxaluria type 3 [MONDO:MONDO:0013327,MedGen:C3150878,OMIM:613616,Orphanet:416,Orphanet:93600] |
|
rs201887670
|
- |
- |
|
rs202015012
|
- |
- |
|
rs2032247686
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs2032282970
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs2058978388
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs2058986411
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs2134768688
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs2134768866
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs2146127288
|
Likely pathogenic |
Infantile cerebellar-retinal degeneration [MONDO:MONDO:0013802,MedGen:C3281192,OMIM:614559,Orphanet:313850] |
|
rs2150741844
|
Likely pathogenic |
Spongy degeneration of central nervous system [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141] |
|
rs2150746796
|
Pathogenic |
Spongy degeneration of central nervous system [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141] |
|
rs28940279
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs34664134
|
- |
- |
|
rs34885252
|
LB/B |
- |
|
rs371807385
|
- |
- |
|
rs371834662
|
- |
- |
|
rs372138644
|
- |
- |
|
rs372399525
|
- |
- |
|
rs375736464
|
Likely pathogenic |
Spongy degeneration of central nervous system [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141] |
|
rs376854191
|
LB/B |
- |
|
rs377156203
|
- |
- |
|
rs377518755
|
- |
- |
|
rs4426527
|
LB/B |
- |
|
rs530962130
|
- |
- |
|
rs536205988
|
- |
- |
|
rs541517496
|
Pathogenic/Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs552474817
|
- |
- |
|
rs559609255
|
- |
- |
|
rs576373242
|
- |
- |
|
rs61729604
|
- |
- |
|
rs73106685
|
LB/B |
- |
|
rs74205173
|
- |
- |
|
rs746419489
|
Pathogenic |
Primary hyperoxaluria type 3|not provided [MONDO:MONDO:0013327,MedGen:C3150878,OMIM:613616,Orphanet:416,Orphanet:93600|MedGen:C3661900] |
|
rs747043550
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs748303093
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of acetyl-CoA acetyltransferase [MedGen:C3661900|MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs748682601
|
Pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs748683840
|
- |
- |
|
rs749568989
|
- |
- |
|
rs750195919
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs750905647
|
- |
- |
|
rs753816946
|
- |
- |
|
rs754049561
|
- |
- |
|
rs754079169
|
- |
- |
|
rs755024692
|
Pathogenic |
not provided|Optic atrophy 9 [MedGen:C3661900|MONDO:MONDO:0014571,MedGen:C4225384,OMIM:616289] |
|
rs756437332
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs756489804
|
Pathogenic |
Primary hyperoxaluria type 3 [MONDO:MONDO:0013327,MedGen:C3150878,OMIM:613616,Orphanet:416,Orphanet:93600] |
|
rs756858917
|
- |
- |
|
rs757087726
|
Pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs757900275
|
- |
- |
|
rs758066653
|
- |
- |
|
rs759784953
|
- |
- |
|
rs759836341
|
- |
- |
|
rs760782027
|
- |
- |
|
rs762757818
|
- |
- |
|
rs764224799
|
- |
- |
|
rs764832926
|
- |
- |
|
rs764887891
|
- |
- |
|
rs765196603
|
- |
- |
|
rs765649468
|
- |
- |
|
rs765910470
|
- |
- |
|
rs767248484
|
- |
- |
|
rs768448235
|
- |
- |
|
rs768492092
|
- |
- |
|
rs770706390
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs771385956
|
- |
- |
|
rs773049803
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs774323189
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs776400068
|
- |
- |
|
rs776777887
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs779013628
|
- |
- |
|
rs780268660
|
- |
- |
|
rs781739244
|
- |
- |
|
rs782308462
|
LP/P |
Developmental and epileptic encephalopathy 51 (DEE51) [MIM:617339] |
|
rs786204545
|
- |
- |
|
rs786204545
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052057
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052059
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052060
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052061
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs796052062
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052063
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052064
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs796052065
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052066
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052079
|
- |
- |
|
rs796052079
|
Pathogenic |
Primary hyperoxaluria, type II [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599] |
|
rs796052088
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria type 3|not provided [MONDO:MONDO:0013327,MedGen:C3150878,OMIM:613616,Orphanet:416,Orphanet:93600|MedGen:C3661900] |
|
rs80358214
|
LP/P |
Congenital systemic glutamine deficiency (CSGD) [MIM:610015] |
|
rs937670540
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
rn00633
|
Nitrotoluene degradation
|
dbSNP |
Type |
Disease name |
|
rs1799931
|
LB/B |
- |
|
rs4986783
|
- |
- |
|
rs4986996
|
LB/B |
- |
|
rs56387565
|
LB/B |
- |
hsa00640
|
Propanoate metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
Pathogenic |
Mitochondrial DNA depletion syndrome 9 [MONDO:MONDO:0009504,MedGen:C3151476,OMIM:245400,Orphanet:17] |
|
-
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
-
|
Pathogenic |
Deficiency of malonyl-CoA decarboxylase [MONDO:MONDO:0009556,MedGen:C0342793,OMIM:248360,Orphanet:943] |
|
-
|
US |
Maple syrup urine disease 1A (MSUD1A) [MIM:248600] |
|
-
|
Pathogenic |
Beta-hydroxyisobutyryl-CoA deacylase deficiency [MONDO:MONDO:0009603,MedGen:C0342738,OMIM:250620,Orphanet:88639] |
|
-
|
Pathogenic |
Glycogen storage disease due to lactate dehydrogenase M-subunit deficiency [MONDO:MONDO:0013047,MedGen:C2931743,OMIM:612933,Orphanet:284426] |
|
-
|
Pathogenic |
Gamma-aminobutyric acid transaminase deficiency [MONDO:MONDO:0013166,MedGen:C0342708,OMIM:613163,Orphanet:2066] |
|
-
|
Likely pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
.
|
- |
- |
|
rs1018955701
|
- |
- |
|
rs1040238997
|
- |
- |
|
rs104894528
|
Pathogenic |
Deficiency of malonyl-CoA decarboxylase|not provided [MONDO:MONDO:0009556,MedGen:C0342793,OMIM:248360,Orphanet:943|MedGen:C3661900] |
|
rs1213234644
|
- |
- |
|
rs121434578
|
Pathogenic |
Gamma-aminobutyric acid transaminase deficiency [MONDO:MONDO:0013166,MedGen:C0342708,OMIM:613163,Orphanet:2066] |
|
rs121918329
|
LP/P |
3-hydroxyisobutryl-CoA hydrolase deficiency (HIBCHD) [MIM:250620] |
|
rs121964988
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs121964991
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs121964993
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs121964999
|
Pathogenic/Likely pathogenic |
not provided|Maple syrup urine disease|See cases|Maple syrup urine disease type 2 [MedGen:C3661900|MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511||MONDO:MONDO:0023693,MedGen:C1855371,OMIM:620699] |
|
rs121965002
|
Pathogenic |
Maple syrup urine disease type 2 [MONDO:MONDO:0023693,MedGen:C1855371,OMIM:620699] |
|
rs1233115152
|
- |
- |
|
rs1303770209
|
Pathogenic/Likely pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs1330753702
|
- |
- |
|
rs1357271377
|
US |
A colorectal cancer sample |
|
rs1364971527
|
Pathogenic/Likely pathogenic |
Beta-hydroxyisobutyryl-CoA deacylase deficiency|See cases [MONDO:MONDO:0009603,MedGen:C0342738,OMIM:250620,Orphanet:88639|] |
|
rs1375748581
|
Pathogenic |
Deficiency of malonyl-CoA decarboxylase [MONDO:MONDO:0009556,MedGen:C0342793,OMIM:248360,Orphanet:943] |
|
rs137852873
|
US |
Maple syrup urine disease 1A (MSUD1A) [MIM:248600] |
|
rs140626260
|
Pathogenic/Likely pathogenic |
Mitochondrial DNA depletion syndrome 9 [MONDO:MONDO:0009504,MedGen:C3151476,OMIM:245400,Orphanet:17] |
|
rs141728876
|
- |
- |
|
rs1421045311
|
- |
- |
|
rs144739734
|
- |
- |
|
rs147617160
|
- |
- |
|
rs148943214
|
- |
- |
|
rs1555538351
|
- |
- |
|
rs1573369925
|
Pathogenic |
Mitochondrial DNA depletion syndrome 9 [MONDO:MONDO:0009504,MedGen:C3151476,OMIM:245400,Orphanet:17] |
|
rs1661796496
|
Likely pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs182923857
|
LP/P |
Maple syrup urine disease 1A (MSUD1A) [MIM:248600] |
|
rs184074326
|
- |
- |
|
rs191644614
|
- |
- |
|
rs200207185
|
- |
- |
|
rs201397255
|
- |
- |
|
rs2032247686
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs2032282970
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs2100779419
|
Pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs2100779875
|
Likely pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs2100797134
|
Pathogenic |
Maple syrup urine disease type 2|Maple syrup urine disease [MONDO:MONDO:0023693,MedGen:C1855371,OMIM:620699|MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs2146127288
|
Likely pathogenic |
Infantile cerebellar-retinal degeneration [MONDO:MONDO:0013802,MedGen:C3281192,OMIM:614559,Orphanet:313850] |
|
rs267607097
|
LP/P |
Mitochondrial DNA depletion syndrome 9 (MTDPS9) [MIM:245400] |
|
rs267607098
|
Pathogenic |
Mitochondrial DNA depletion syndrome 9 [MONDO:MONDO:0009504,MedGen:C3151476,OMIM:245400,Orphanet:17] |
|
rs267607099
|
LP/P |
Mitochondrial DNA depletion syndrome 9 (MTDPS9) [MIM:245400] |
|
rs35494829
|
- |
- |
|
rs367938014
|
- |
- |
|
rs368127499
|
- |
- |
|
rs369153479
|
Pathogenic |
Mitochondrial DNA depletion syndrome 9 [MONDO:MONDO:0009504,MedGen:C3151476,OMIM:245400,Orphanet:17] |
|
rs371807385
|
- |
- |
|
rs372255821
|
- |
- |
|
rs377518755
|
- |
- |
|
rs398123503
|
LP/P |
Maple syrup urine disease 1A (MSUD1A) [MIM:248600] |
|
rs398123503
|
Pathogenic/Likely pathogenic |
Maple syrup urine disease|not provided [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511|MedGen:C3661900] |
|
rs398123675
|
Pathogenic |
not provided|Maple syrup urine disease [MedGen:C3661900|MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs564792232
|
- |
- |
|
rs575833641
|
- |
- |
|
rs748682601
|
Pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs748725086
|
- |
- |
|
rs750594890
|
Pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs753617532
|
- |
- |
|
rs755024692
|
Pathogenic |
not provided|Optic atrophy 9 [MedGen:C3661900|MONDO:MONDO:0014571,MedGen:C4225384,OMIM:616289] |
|
rs757087726
|
Pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs759043861
|
Pathogenic/Likely pathogenic |
Deficiency of malonyl-CoA decarboxylase [MONDO:MONDO:0009556,MedGen:C0342793,OMIM:248360,Orphanet:943] |
|
rs759846791
|
- |
- |
|
rs761996996
|
Pathogenic/Likely pathogenic |
Maple syrup urine disease|not provided [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511|MedGen:C3661900] |
|
rs764832926
|
- |
- |
|
rs765045050
|
Likely pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs765257706
|
Likely pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs767254883
|
- |
- |
|
rs768495738
|
- |
- |
|
rs769688327
|
LP/P |
Maple syrup urine disease 1A (MSUD1A) [MIM:248600] |
|
rs770114459
|
Pathogenic |
Beta-hydroxyisobutyryl-CoA deacylase deficiency [MONDO:MONDO:0009603,MedGen:C0342738,OMIM:250620,Orphanet:88639] |
|
rs773048903
|
Pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs776400068
|
- |
- |
|
rs776448754
|
- |
- |
|
rs777019739
|
- |
- |
|
rs777954556
|
LP/P |
Lactate dehydrogenase B deficiency (LDHBD) [MIM:614128] |
|
rs779820787
|
- |
- |
|
rs781555217
|
Pathogenic |
Gamma-aminobutyric acid transaminase deficiency [MONDO:MONDO:0013166,MedGen:C0342708,OMIM:613163,Orphanet:2066] |
|
rs869312125
|
Pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs905092947
|
- |
- |
rn00642
|
Ethylbenzene degradation
|
dbSNP |
Type |
Disease name |
|
.
|
- |
- |
|
rs371834662
|
- |
- |
rn00643
|
Styrene degradation
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Tyrosinemia type I [MONDO:MONDO:0010161,MedGen:C0268490,OMIM:276700,Orphanet:882] |
|
-
|
LP/P |
Microphthalmia, isolated, 8 (MCOP8) [MIM:615113] |
|
-
|
Likely pathogenic |
Isolated microphthalmia 8 [MONDO:MONDO:0014050,MedGen:C3554524,OMIM:615113,Orphanet:2542] |
|
.
|
- |
- |
|
rs115638369
|
- |
- |
|
rs1193030161
|
Pathogenic |
Tyrosinemia type I [MONDO:MONDO:0010161,MedGen:C0268490,OMIM:276700,Orphanet:882] |
|
rs121965074
|
Likely pathogenic |
Tyrosinemia type I [MONDO:MONDO:0010161,MedGen:C0268490,OMIM:276700,Orphanet:882] |
|
rs1420414848
|
Pathogenic/Likely pathogenic |
Tyrosinemia type I [MONDO:MONDO:0010161,MedGen:C0268490,OMIM:276700,Orphanet:882] |
|
rs1595894742
|
Likely pathogenic |
Tyrosinemia type I [MONDO:MONDO:0010161,MedGen:C0268490,OMIM:276700,Orphanet:882] |
|
rs547918064
|
- |
- |
|
rs547918064
|
Likely pathogenic |
not provided|Isolated microphthalmia 8 [MedGen:C3661900|MONDO:MONDO:0014050,MedGen:C3554524,OMIM:615113,Orphanet:2542] |
|
rs746854963
|
- |
- |
|
rs769550316
|
- |
- |
|
rs769550316
|
Pathogenic |
Tyrosinemia type I|not provided [MONDO:MONDO:0010161,MedGen:C0268490,OMIM:276700,Orphanet:882|MedGen:C3661900] |
|
rs781507152
|
- |
- |
|
rs80338897
|
Pathogenic |
Tyrosinemia type I [MONDO:MONDO:0010161,MedGen:C0268490,OMIM:276700,Orphanet:882] |
hsa00650
|
Butanoate metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
Pathogenic |
Paragangliomas 1 [MONDO:MONDO:0008192,MedGen:C3494181,OMIM:168000,Orphanet:29072] |
|
-
|
Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
-
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
-
|
Likely pathogenic |
Deficiency of 3-hydroxyacyl-CoA dehydrogenase [MONDO:MONDO:0017715,MedGen:C1291230,OMIM:231530,Orphanet:309127,Orphanet:71212] |
|
-
|
LP/P |
Succinyl-CoA:3-oxoacid CoA transferase deficiency (SCOTD) [MIM:245050] |
|
-
|
LP/P |
3-hydroxy-3-methylglutaryl-CoA lyase deficiency (HMGCLD) [MIM:246450] |
|
-
|
Likely pathogenic |
Deficiency of hydroxymethylglutaryl-CoA lyase [MONDO:MONDO:0009520,MedGen:C0268601,OMIM:246450,Orphanet:20] |
|
-
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type II|not provided [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599|MedGen:C3661900] |
|
-
|
Pathogenic |
Acyl-CoA oxidase deficiency [MONDO:MONDO:0009919,MedGen:C1849678,OMIM:264470,Orphanet:2971] |
|
-
|
LP/P |
Succinic semialdehyde dehydrogenase deficiency (SSADHD) [MIM:271980] |
|
-
|
Pathogenic |
Succinate-semialdehyde dehydrogenase deficiency [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22] |
|
-
|
Pathogenic |
Gamma-aminobutyric acid transaminase deficiency [MONDO:MONDO:0013166,MedGen:C0342708,OMIM:613163,Orphanet:2066] |
|
-
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
.
|
- |
- |
|
rs1014048269
|
- |
- |
|
rs1041969
|
LB/B |
- |
|
rs104886492
|
US |
HSD10 mitochondrial disease (HSD10MD) [MIM:300438] |
|
rs104894302
|
Pathogenic |
Paragangliomas 1|Hereditary cancer-predisposing syndrome|Paragangliomas with sensorineural hearing loss [MONDO:MONDO:0008192,MedGen:C3494181,OMIM:168000,Orphanet:29072|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MedGen:C1868633]; Cowden syndrome 3 [MONDO:MONDO:0014045,MedGen:CN166604,Orphanet:201]; Pheochromocytoma [Human Phenotype Ontology:HP:0002666,MONDO:MONDO:0008233,MedGen:C0031511,OMIM:171300,Orphanet:29072]; Carney-Stratakis syndrome [MONDO:MONDO:0011740,MedGen:C1847319,OMIM:606864,Orphanet:97286] |
|
rs1057516564
|
Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs1060503769
|
Pathogenic |
Carney-Stratakis syndrome [MONDO:MONDO:0011740,MedGen:C1847319,OMIM:606864,Orphanet:97286]; Pheochromocytoma [Human Phenotype Ontology:HP:0002666,MONDO:MONDO:0008233,MedGen:C0031511,OMIM:171300,Orphanet:29072]; Cowden syndrome 3 [MONDO:MONDO:0014045,MedGen:CN166604,Orphanet:201]; Paragangliomas with sensorineural hearing loss|Hereditary cancer-predisposing syndrome [MedGen:C1868633|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] |
|
rs111621042
|
- |
- |
|
rs1126673
|
- |
- |
|
rs1131691065
|
Pathogenic |
Hereditary cancer-predisposing syndrome|Pheochromocytoma [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0002666,MONDO:MONDO:0008233,MedGen:C0031511,OMIM:171300,Orphanet:29072]; Paragangliomas with sensorineural hearing loss [MedGen:C1868633]; Cowden syndrome 3 [MONDO:MONDO:0014045,MedGen:CN166604,Orphanet:201]; Carney-Stratakis syndrome|Mitochondrial complex 2 deficiency, nuclear type 3 [MONDO:MONDO:0011740,MedGen:C1847319,OMIM:606864,Orphanet:97286|MONDO:MONDO:0030937,MedGen:C5436934,OMIM:619167] |
|
rs1135640
|
- |
- |
|
rs118203982
|
Pathogenic |
Succinate-semialdehyde dehydrogenase deficiency|not provided [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22|MedGen:C3661900] |
|
rs118204090
|
Pathogenic |
Acyl-CoA oxidase deficiency [MONDO:MONDO:0009919,MedGen:C1849678,OMIM:264470,Orphanet:2971] |
|
rs118204091
|
- |
- |
|
rs118204091
|
Pathogenic |
Acyl-CoA oxidase deficiency [MONDO:MONDO:0009919,MedGen:C1849678,OMIM:264470,Orphanet:2971] |
|
rs118204092
|
Pathogenic |
Acyl-CoA oxidase deficiency [MONDO:MONDO:0009919,MedGen:C1849678,OMIM:264470,Orphanet:2971] |
|
rs120074141
|
LP/P |
3-ketothiolase deficiency (3KTD) [MIM:203750] |
|
rs1202368985
|
- |
- |
|
rs1209918450
|
- |
- |
|
rs121434275
|
LP/P |
Acyl-CoA dehydrogenase medium-chain deficiency (ACADMD) [MIM:201450] |
|
rs121434278
|
- |
- |
|
rs121434278
|
LP/P |
Acyl-CoA dehydrogenase medium-chain deficiency (ACADMD) [MIM:201450] |
|
rs121434279
|
LP/P |
Acyl-CoA dehydrogenase medium-chain deficiency (ACADMD) [MIM:201450] |
|
rs121434281
|
LP/P |
Acyl-CoA dehydrogenase medium-chain deficiency (ACADMD) [MIM:201450] |
|
rs121434283
|
LP/P |
Acyl-CoA dehydrogenase medium-chain deficiency (ACADMD) [MIM:201450] |
|
rs121434578
|
Pathogenic |
Gamma-aminobutyric acid transaminase deficiency [MONDO:MONDO:0013166,MedGen:C0342708,OMIM:613163,Orphanet:2066] |
|
rs121909301
|
LP/P |
Succinyl-CoA:3-oxoacid CoA transferase deficiency (SCOTD) [MIM:245050] |
|
rs121964997
|
Pathogenic |
Deficiency of hydroxymethylglutaryl-CoA lyase|not provided|Long chain 3-hydroxyacyl-CoA dehydrogenase deficiency [MONDO:MONDO:0009520,MedGen:C0268601,OMIM:246450,Orphanet:20|MedGen:C3661900|MONDO:MONDO:0012173,MedGen:C3711645,OMIM:609016,Orphanet:5] |
|
rs1229984
|
LB/B |
- |
|
rs1232923691
|
- |
- |
|
rs1260394550
|
Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs1265872256
|
- |
- |
|
rs1289541397
|
- |
- |
|
rs1304729997
|
- |
- |
|
rs1326526453
|
- |
- |
|
rs1326526453
|
LP/P |
Succinic semialdehyde dehydrogenase deficiency (SSADHD) [MIM:271980] |
|
rs1327401976
|
LP/P |
Succinyl-CoA:3-oxoacid CoA transferase deficiency (SCOTD) [MIM:245050] |
|
rs1327662246
|
- |
- |
|
rs1333327173
|
- |
- |
|
rs1357942068
|
LP/P |
3-hydroxy-3-methylglutaryl-CoA lyase deficiency (HMGCLD) [MIM:246450] |
|
rs137852640
|
Pathogenic |
3-hydroxy-3-methylglutaryl-CoA synthase deficiency [MONDO:MONDO:0011614,MedGen:C2751532,OMIM:605911,Orphanet:35701] |
|
rs137853096
|
LP/P |
D-bifunctional protein deficiency (DBPD) [MIM:261515] |
|
rs137853101
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs137853102
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs1392361503
|
Pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs140049721
|
- |
- |
|
rs142106780
|
- |
- |
|
rs1423978863
|
Pathogenic |
Hereditary cancer-predisposing syndrome|Mitochondrial complex II deficiency, nuclear type 1 [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0100294,MedGen:C5700310,OMIM:252011,Orphanet:3208]; Paragangliomas 5 [MONDO:MONDO:0013602,MedGen:C3279992,OMIM:614165,Orphanet:29072] |
|
rs1429178288
|
- |
- |
|
rs143500332
|
- |
- |
|
rs1437567292
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1445870588
|
- |
- |
|
rs145087265
|
LP/P |
Succinic semialdehyde dehydrogenase deficiency (SSADHD) [MIM:271980] |
|
rs145712373
|
- |
- |
|
rs145838142
|
Pathogenic/Likely pathogenic |
3-hydroxy-3-methylglutaryl-CoA synthase deficiency [MONDO:MONDO:0011614,MedGen:C2751532,OMIM:605911,Orphanet:35701] |
|
rs145899443
|
- |
- |
|
rs1467902610
|
LP/P |
3-hydroxy-3-methylglutaryl-CoA lyase deficiency (HMGCLD) [MIM:246450] |
|
rs1471862905
|
- |
- |
|
rs148032473
|
- |
- |
|
rs148478247
|
- |
- |
|
rs149408684
|
- |
- |
|
rs150010732
|
- |
- |
|
rs150327444
|
- |
- |
|
rs1553131940
|
LP/P |
3-hydroxy-3-methylglutaryl-CoA lyase deficiency (HMGCLD) [MIM:246450] |
|
rs1553132209
|
Pathogenic |
Deficiency of hydroxymethylglutaryl-CoA lyase [MONDO:MONDO:0009520,MedGen:C0268601,OMIM:246450,Orphanet:20] |
|
rs1557466604
|
Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs1560992565
|
Pathogenic |
Mitochondrial complex II deficiency, nuclear type 1 [MONDO:MONDO:0100294,MedGen:C5700310,OMIM:252011,Orphanet:3208]; Paragangliomas 5|Hereditary cancer-predisposing syndrome|Paragangliomas 5 [MONDO:MONDO:0013602,MedGen:C3279992,OMIM:614165,Orphanet:29072|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0013602,MedGen:C3279992,OMIM:614165,Orphanet:29072] |
|
rs1561442127
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs1567876984
|
Pathogenic/Likely pathogenic |
ACOX1-related condition|Mitchell syndrome|not provided|ACOX1-related disorders|Acyl-CoA oxidase deficiency|Inborn genetic diseases [|MONDO:MONDO:0030073,MedGen:C5394554,OMIM:618960|MedGen:C3661900||MONDO:MONDO:0009919,MedGen:C1849678,OMIM:264470,Orphanet:2971|MeSH:D030342,MedGen:C0950123] |
|
rs1570876467
|
Pathogenic/Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs1579903197
|
Likely pathogenic |
Succinyl-CoA acetoacetate transferase deficiency [MONDO:MONDO:0009492,MedGen:C0342792,OMIM:245050,Orphanet:832] |
|
rs1591374629
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1591374632
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1638619737
|
Likely pathogenic |
Deficiency of hydroxymethylglutaryl-CoA lyase [MONDO:MONDO:0009520,MedGen:C0268601,OMIM:246450,Orphanet:20] |
|
rs1652875135
|
Likely pathogenic |
3-hydroxy-3-methylglutaryl-CoA synthase deficiency [MONDO:MONDO:0011614,MedGen:C2751532,OMIM:605911,Orphanet:35701] |
|
rs1764675543
|
Pathogenic |
Succinate-semialdehyde dehydrogenase deficiency [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22] |
|
rs180177312
|
Likely pathogenic |
Primary hyperoxaluria, type II [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599] |
|
rs180177314
|
Pathogenic |
Primary hyperoxaluria, type II|Primary hyperoxaluria|not provided [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416|MedGen:C3661900] |
|
rs180177322
|
- |
- |
|
rs180177322
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type II|not provided [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599|MedGen:C3661900] |
|
rs180177323
|
Likely pathogenic |
Primary hyperoxaluria, type II [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599] |
|
rs1823086297
|
Likely pathogenic |
Primary hyperoxaluria, type II [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599] |
|
rs199587895
|
LP/P |
3-hydroxy-3-methylglutaryl-CoA lyase deficiency (HMGCLD) [MIM:246450] |
|
rs200189529
|
Likely pathogenic |
Deficiency of hydroxymethylglutaryl-CoA lyase [MONDO:MONDO:0009520,MedGen:C0268601,OMIM:246450,Orphanet:20] |
|
rs200207185
|
- |
- |
|
rs200955062
|
- |
- |
|
rs201397255
|
- |
- |
|
rs201865375
|
- |
- |
|
rs201865375
|
Pathogenic/Likely pathogenic |
Mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency|not provided [MONDO:MONDO:0014563,MedGen:C4225391,OMIM:616277,Orphanet:255241|MedGen:C3661900] |
|
rs201934016
|
- |
- |
|
rs202015012
|
- |
- |
|
rs202090220
|
- |
- |
|
rs2066702
|
LB/B |
- |
|
rs2100417374
|
Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs2100417476
|
Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs2100453612
|
Pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs2127385894
|
Pathogenic |
Succinate-semialdehyde dehydrogenase deficiency [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22] |
|
rs2134768688
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs2134768866
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs2148424154
|
Pathogenic |
Deficiency of hydroxymethylglutaryl-CoA lyase [MONDO:MONDO:0009520,MedGen:C0268601,OMIM:246450,Orphanet:20] |
|
rs2148425853
|
Pathogenic |
Deficiency of hydroxymethylglutaryl-CoA lyase [MONDO:MONDO:0009520,MedGen:C0268601,OMIM:246450,Orphanet:20] |
|
rs28730628
|
LB/B |
- |
|
rs35385902
|
LB/B |
- |
|
rs367861880
|
- |
- |
|
rs367902441
|
- |
- |
|
rs368127499
|
- |
- |
|
rs368688262
|
- |
- |
|
rs369643387
|
Pathogenic |
Succinyl-CoA acetoacetate transferase deficiency [MONDO:MONDO:0009492,MedGen:C0342792,OMIM:245050,Orphanet:832] |
|
rs371582393
|
Likely pathogenic |
Mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency [MONDO:MONDO:0014563,MedGen:C4225391,OMIM:616277,Orphanet:255241] |
|
rs371834662
|
- |
- |
|
rs374232934
|
- |
- |
|
rs3744032
|
- |
- |
|
rs375032130
|
Pathogenic/Likely pathogenic |
not provided|Mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency|See cases [MedGen:C3661900|MONDO:MONDO:0014563,MedGen:C4225391,OMIM:616277,Orphanet:255241|] |
|
rs375266808
|
Pathogenic |
Mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency|not provided [MONDO:MONDO:0014563,MedGen:C4225391,OMIM:616277,Orphanet:255241|MedGen:C3661900] |
|
rs375628463
|
LP/P |
Succinic semialdehyde dehydrogenase deficiency (SSADHD) [MIM:271980] |
|
rs377699817
|
- |
- |
|
rs4586421
|
LB/B |
- |
|
rs541517496
|
Pathogenic/Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs549256374
|
- |
- |
|
rs550705310
|
- |
- |
|
rs56251804
|
- |
- |
|
rs574370650
|
- |
- |
|
rs577954688
|
- |
- |
|
rs587688416
|
Likely pathogenic |
3-hydroxy-3-methylglutaryl-CoA synthase deficiency [MONDO:MONDO:0011614,MedGen:C2751532,OMIM:605911,Orphanet:35701] |
|
rs62621664
|
LB/B |
- |
|
rs62621664
|
Likely pathogenic |
Succinate-semialdehyde dehydrogenase deficiency [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22] |
|
rs72552283
|
LP/P |
Succinic semialdehyde dehydrogenase deficiency (SSADHD) [MIM:271980] |
|
rs727503963
|
LP/P |
3-hydroxy-3-methylglutaryl-CoA lyase deficiency (HMGCLD) [MIM:246450] |
|
rs727503963
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of hydroxymethylglutaryl-CoA lyase|Long chain 3-hydroxyacyl-CoA dehydrogenase deficiency|HMGCL-related condition [MedGen:C3661900|MONDO:MONDO:0009520,MedGen:C0268601,OMIM:246450,Orphanet:20|MONDO:MONDO:0012173,MedGen:C3711645,OMIM:609016,Orphanet:5|] |
|
rs74428123
|
- |
- |
|
rs74451421
|
- |
- |
|
rs745423719
|
- |
- |
|
rs745844469
|
Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs747209153
|
- |
- |
|
rs747273688
|
- |
- |
|
rs748170674
|
Pathogenic |
Succinate-semialdehyde dehydrogenase deficiency [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22] |
|
rs748303093
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of acetyl-CoA acetyltransferase [MedGen:C3661900|MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs748337518
|
- |
- |
|
rs748725086
|
- |
- |
|
rs750195919
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs750389182
|
- |
- |
|
rs751888532
|
Pathogenic/Likely pathogenic |
Succinate-semialdehyde dehydrogenase deficiency|not provided|ALDH5A1-related condition [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22|MedGen:C3661900|] |
|
rs752258545
|
- |
- |
|
rs752931737
|
- |
- |
|
rs753816946
|
- |
- |
|
rs755255464
|
- |
- |
|
rs75603553
|
- |
- |
|
rs757187379
|
- |
- |
|
rs758723288
|
Likely pathogenic |
Mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency|not provided|ECHS1-related condition [MONDO:MONDO:0014563,MedGen:C4225391,OMIM:616277,Orphanet:255241|MedGen:C3661900|] |
|
rs75967634
|
- |
- |
|
rs760106433
|
LP/P |
3-hydroxy-3-methylglutaryl-CoA lyase deficiency (HMGCLD) [MIM:246450] |
|
rs760782027
|
- |
- |
|
rs761042153
|
- |
- |
|
rs762211049
|
Likely pathogenic |
3-hydroxy-3-methylglutaryl-CoA synthase deficiency [MONDO:MONDO:0011614,MedGen:C2751532,OMIM:605911,Orphanet:35701] |
|
rs763392896
|
- |
- |
|
rs764039230
|
- |
- |
|
rs765198174
|
Likely pathogenic |
Deficiency of hydroxymethylglutaryl-CoA lyase [MONDO:MONDO:0009520,MedGen:C0268601,OMIM:246450,Orphanet:20] |
|
rs765561257
|
LP/P |
Succinic semialdehyde dehydrogenase deficiency (SSADHD) [MIM:271980] |
|
rs768448235
|
- |
- |
|
rs768495738
|
- |
- |
|
rs768697532
|
- |
- |
|
rs769763635
|
- |
- |
|
rs770028533
|
- |
- |
|
rs770225915
|
Pathogenic/Likely pathogenic |
Deficiency of hydroxymethylglutaryl-CoA lyase|Long chain 3-hydroxyacyl-CoA dehydrogenase deficiency [MONDO:MONDO:0009520,MedGen:C0268601,OMIM:246450,Orphanet:20|MONDO:MONDO:0012173,MedGen:C3711645,OMIM:609016,Orphanet:5] |
|
rs772361710
|
- |
- |
|
rs773677327
|
Pathogenic/Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency|not provided [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42|MedGen:C3661900] |
|
rs774496720
|
- |
- |
|
rs779135938
|
Likely pathogenic |
Deficiency of 3-hydroxyacyl-CoA dehydrogenase|Hyperinsulinemic hypoglycemia|Hyperinsulinemic hypoglycemia, familial, 4 [MONDO:MONDO:0017715,MedGen:C1291230,OMIM:231530,Orphanet:309127,Orphanet:71212|Human Phenotype Ontology:HP:0000825,MONDO:MONDO:0005803,MedGen:C1864903,OMIM:PS256450,Orphanet:443095|MONDO:MONDO:0012382,MedGen:C1864948,OMIM:609975,Orphanet:71212] |
|
rs780603911
|
- |
- |
|
rs781555217
|
Pathogenic |
Gamma-aminobutyric acid transaminase deficiency [MONDO:MONDO:0013166,MedGen:C0342708,OMIM:613163,Orphanet:2066] |
|
rs786202403
|
Pathogenic/Likely pathogenic |
Hereditary cancer-predisposing syndrome|Pheochromocytoma [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0002666,MONDO:MONDO:0008233,MedGen:C0031511,OMIM:171300,Orphanet:29072]; Cowden syndrome 3 [MONDO:MONDO:0014045,MedGen:CN166604,Orphanet:201]; Carney-Stratakis syndrome [MONDO:MONDO:0011740,MedGen:C1847319,OMIM:606864,Orphanet:97286]; Paragangliomas with sensorineural hearing loss [MedGen:C1868633] |
|
rs786205145
|
Likely pathogenic |
Carney triad [MONDO:MONDO:0011424,MedGen:C1858592,OMIM:604287,Orphanet:139411] |
|
rs80338847
|
Pathogenic |
Paragangliomas 1|Hereditary pheochromocytoma-paraganglioma|not provided [MONDO:MONDO:0008192,MedGen:C3494181,OMIM:168000,Orphanet:29072|MONDO:MONDO:0017366,MedGen:C1708353,Orphanet:29072|MedGen:CN517202] |
|
rs80338847
|
Likely pathogenic |
Paragangliomas with sensorineural hearing loss [MedGen:C1868633]; Carney-Stratakis syndrome [MONDO:MONDO:0011740,MedGen:C1847319,OMIM:606864,Orphanet:97286]; Cowden syndrome 3 [MONDO:MONDO:0014045,MedGen:CN166604,Orphanet:201]; Pheochromocytoma [Human Phenotype Ontology:HP:0002666,MONDO:MONDO:0008233,MedGen:C0031511,OMIM:171300,Orphanet:29072] |
|
rs875989867
|
Pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs886037927
|
Likely pathogenic |
HSD10 mitochondrial disease [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295] |
|
rs886043944
|
- |
- |
|
rs906284769
|
Pathogenic/Likely pathogenic |
not specified|Succinate-semialdehyde dehydrogenase deficiency|not provided [MedGen:CN169374|MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22|MedGen:C3661900] |
hsa00670
|
One carbon pool by folate
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
-
|
Pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395] |
|
-
|
Likely pathogenic |
Neural tube defects, folate-sensitive [MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
-
|
US |
Dyskeratosis congenita, digenic (DKCD) [MIM:620040] |
|
.
|
- |
- |
|
rs1018203291
|
- |
- |
|
rs1057519361
|
Pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395] |
|
rs1159245188
|
- |
- |
|
rs1182635980
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs1182635980
|
Pathogenic/Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|Neural tube defects, folate-sensitive [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
rs121434295
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs121434295
|
Pathogenic/Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|Schizophrenia [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|Human Phenotype Ontology:HP:0100753,MONDO:MONDO:0005090,MeSH:D012559,MedGen:C0036341,OMIM:181500]; Homocystinuria due to methylene tetrahydrofolate reductase deficiency [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395]; Thrombophilia due to thrombin defect [MONDO:MONDO:0008559,MedGen:C3160733,OMIM:188050]; Neural tube defects, folate-sensitive|Neural tube defects, folate-sensitive [MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
rs121434297
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs121434297
|
Pathogenic/Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|Neural tube defects, folate-sensitive [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
rs121913580
|
Pathogenic |
Methylcobalamin deficiency type cblG [MONDO:MONDO:0009609,MedGen:C1855128,OMIM:250940,Orphanet:2170,Orphanet:622] |
|
rs1262762031
|
- |
- |
|
rs1298336881
|
- |
- |
|
rs1305385953
|
- |
- |
|
rs1314085200
|
Pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395] |
|
rs1356115868
|
- |
- |
|
rs1360692694
|
- |
- |
|
rs1376129073
|
- |
- |
|
rs139645527
|
Pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|Neural tube defects, folate-sensitive [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
rs141210410
|
LP/P |
Combined immunodeficiency and megaloblastic anemia with or without hyperhomocysteinemia (CIMAH) [MIM:617780] |
|
rs144508139
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs149445900
|
- |
- |
|
rs149917863
|
- |
- |
|
rs1553185069
|
Likely pathogenic |
not provided|Homocystinuria due to methylene tetrahydrofolate reductase deficiency [MedGen:C3661900|MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395] |
|
rs1555336810
|
LP/P |
Combined immunodeficiency and megaloblastic anemia with or without hyperhomocysteinemia (CIMAH) [MIM:617780] |
|
rs1555337681
|
Likely pathogenic |
Combined immunodeficiency and megaloblastic anemia with or without hyperhomocysteinemia [MONDO:MONDO:0060611,MedGen:C4540434,OMIM:617780] |
|
rs1644355976
|
Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395] |
|
rs1662641467
|
Likely pathogenic |
Methylcobalamin deficiency type cblG [MONDO:MONDO:0009609,MedGen:C1855128,OMIM:250940,Orphanet:2170,Orphanet:622] |
|
rs190087897
|
- |
- |
|
rs1950902
|
- |
- |
|
rs199476142
|
Pathogenic/Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|Neural tube defects, folate-sensitive [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
rs199644243
|
- |
- |
|
rs200100285
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs200137991
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs200137991
|
Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|not provided|Neural tube defects, folate-sensitive [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MedGen:C3661900|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
rs200290145
|
- |
- |
|
rs200637968
|
- |
- |
|
rs200688214
|
Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|not provided [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MedGen:C3661900] |
|
rs201232068
|
- |
- |
|
rs201524044
|
- |
- |
|
rs201618781
|
- |
- |
|
rs201618781
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs201849671
|
- |
- |
|
rs2066472
|
LB/B |
- |
|
rs2100499494
|
Pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395] |
|
rs2276724
|
- |
- |
|
rs2372536
|
- |
- |
|
rs267606887
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs34181110
|
LB/B |
- |
|
rs367585605
|
Pathogenic/Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|Thrombophilia due to thrombin defect [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MONDO:MONDO:0008559,MedGen:C3160733,OMIM:188050]; Homocystinuria due to methylene tetrahydrofolate reductase deficiency [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395]; Neural tube defects, folate-sensitive [MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823]; Schizophrenia|Neural tube defects, folate-sensitive [Human Phenotype Ontology:HP:0100753,MONDO:MONDO:0005090,MeSH:D012559,MedGen:C0036341,OMIM:181500|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
rs367651399
|
- |
- |
|
rs367883268
|
- |
- |
|
rs369643556
|
- |
- |
|
rs370444838
|
LP/P |
Combined immunodeficiency and megaloblastic anemia with or without hyperhomocysteinemia (CIMAH) [MIM:617780] |
|
rs371085894
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs372686234
|
- |
- |
|
rs373398993
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs374724805
|
Pathogenic |
Glutamate formiminotransferase deficiency [MONDO:MONDO:0009240,MedGen:C0268609,OMIM:229100,Orphanet:51208] |
|
rs375990689
|
- |
- |
|
rs375997993
|
- |
- |
|
rs387906619
|
LP/P |
Megaloblastic anemia due to dihydrofolate reductase deficiency (DHFRD) [MIM:613839] |
|
rs545086633
|
Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|Neural tube defects, folate-sensitive [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
rs548538312
|
- |
- |
|
rs561027881
|
- |
- |
|
rs56182143
|
- |
- |
|
rs748571395
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs748683840
|
- |
- |
|
rs749729349
|
- |
- |
|
rs750510348
|
- |
- |
|
rs751600310
|
- |
- |
|
rs753635972
|
LP/P |
Neurodevelopmental disorder with microcephaly, epilepsy, and hypomyelination (NEDMEHM) [MIM:618367] |
|
rs754015864
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs754079169
|
- |
- |
|
rs754980119
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs754980119
|
Pathogenic/Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|not provided|Homocystinuria due to methylene tetrahydrofolate reductase deficiency [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MedGen:C3661900|MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395]; Thrombophilia due to thrombin defect [MONDO:MONDO:0008559,MedGen:C3160733,OMIM:188050]; Neural tube defects, folate-sensitive [MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823]; Schizophrenia|Neural tube defects, folate-sensitive [Human Phenotype Ontology:HP:0100753,MONDO:MONDO:0005090,MeSH:D012559,MedGen:C0036341,OMIM:181500|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
rs757784497
|
- |
- |
|
rs758066653
|
- |
- |
|
rs759031330
|
- |
- |
|
rs759031330
|
Pathogenic/Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395] |
|
rs759784953
|
- |
- |
|
rs760161369
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs763008093
|
- |
- |
|
rs763539350
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs763539350
|
Pathogenic/Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|Neural tube defects, folate-sensitive [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
rs763959573
|
- |
- |
|
rs764131110
|
- |
- |
|
rs765586205
|
Pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|Neural tube defects, folate-sensitive [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
rs768492092
|
- |
- |
|
rs769381688
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs771379232
|
Likely pathogenic |
Neurodevelopmental disorder with microcephaly, epilepsy, and hypomyelination [MONDO:MONDO:0032705,MedGen:C5193057,OMIM:618367,Orphanet:597874] |
|
rs771978838
|
LP/P |
Combined immunodeficiency and megaloblastic anemia with or without hyperhomocysteinemia (CIMAH) [MIM:617780] |
|
rs772187163
|
Pathogenic |
Neurodevelopmental disorder with microcephaly, epilepsy, and hypomyelination [MONDO:MONDO:0032705,MedGen:C5193057,OMIM:618367,Orphanet:597874] |
|
rs77239104
|
- |
- |
|
rs773901293
|
- |
- |
|
rs775642396
|
- |
- |
|
rs775829502
|
- |
- |
|
rs777459947
|
- |
- |
|
rs781387185
|
- |
- |
|
rs786204014
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs786204017
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs786204018
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs786204019
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs786204021
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs786204023
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs796064510
|
Pathogenic |
not provided|Combined immunodeficiency and megaloblastic anemia with or without hyperhomocysteinemia [MedGen:CN517202|MONDO:MONDO:0060611,MedGen:C4540434,OMIM:617780] |
|
rs9636610
|
- |
- |
|
rs983672500
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs986604359
|
Pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|Neural tube defects, folate-sensitive [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
rn00680
|
Methane metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Fructose-biphosphatase deficiency [MONDO:MONDO:0009251,MedGen:C0016756,OMIM:229700,Orphanet:348] |
|
-
|
Likely pathogenic |
Glycogen storage disease, type VII [MONDO:MONDO:0009295,MedGen:C0017926,OMIM:232800,Orphanet:371] |
|
-
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
-
|
Likely pathogenic |
Primary hyperoxaluria, type II [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599] |
|
-
|
Pathogenic/Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
-
|
LP/P |
Phosphoserine aminotransferase deficiency (PSATD) [MIM:610992] |
|
-
|
LP/P |
Neu-Laxova syndrome 2 (NLS2) [MIM:616038] |
|
-
|
US |
Neurodevelopmental disorder with cardiomyopathy, spasticity, and brain abnormalities (NEDCASB) [MIM:619121] |
|
.
|
- |
- |
|
rs1041969
|
LB/B |
- |
|
rs104894035
|
LP/P |
Phosphoserine phosphatase deficiency (PSPHD) [MIM:614023] |
|
rs104894036
|
LP/P |
Phosphoserine phosphatase deficiency (PSPHD) [MIM:614023] |
|
rs1126673
|
- |
- |
|
rs115014558
|
LB/B |
- |
|
rs1176072053
|
- |
- |
|
rs1193344118
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs1209918450
|
- |
- |
|
rs1213395414
|
- |
- |
|
rs121908520
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908521
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs121908522
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908522
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs121908524
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908524
|
Pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs121908526
|
- |
- |
|
rs121908526
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908527
|
- |
- |
|
rs121908527
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908528
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs121908529
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria|AGXT-related condition [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416|] |
|
rs121908530
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908530
|
Pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs121909534
|
Pathogenic |
HNSHA due to aldolase A deficiency [MONDO:MONDO:0012747,MedGen:C0272066,OMIM:611881,Orphanet:57] |
|
rs121918189
|
- |
- |
|
rs121918189
|
Pathogenic |
Fructose-biphosphatase deficiency [MONDO:MONDO:0009251,MedGen:C0016756,OMIM:229700,Orphanet:348] |
|
rs121918190
|
Pathogenic |
Fructose-biphosphatase deficiency [MONDO:MONDO:0009251,MedGen:C0016756,OMIM:229700,Orphanet:348] |
|
rs121964925
|
LP/P |
Erythrocytosis, familial, 8 (ECYT8) [MIM:222800] |
|
rs1229984
|
LB/B |
- |
|
rs1262762031
|
- |
- |
|
rs1280636156
|
- |
- |
|
rs1311224546
|
- |
- |
|
rs1327662246
|
- |
- |
|
rs13408961
|
LB/B |
- |
|
rs1366833576
|
- |
- |
|
rs137853207
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs137853209
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs137853210
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs138025751
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs138893744
|
Pathogenic |
Glycogen storage disease, type VII [MONDO:MONDO:0009295,MedGen:C0017926,OMIM:232800,Orphanet:371] |
|
rs1393023702
|
- |
- |
|
rs140992177
|
LB/B |
- |
|
rs142114432
|
- |
- |
|
rs143485300
|
- |
- |
|
rs1471862905
|
- |
- |
|
rs149408684
|
- |
- |
|
rs1554411234
|
Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs1585237892
|
Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs180177155
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177156
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177156
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs180177157
|
- |
- |
|
rs180177157
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177161
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177162
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177163
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177173
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177182
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177184
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177184
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs180177185
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177186
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177189
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177191
|
- |
- |
|
rs180177191
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177195
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177197
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177198
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177199
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177202
|
Pathogenic |
Primary hyperoxaluria, type I|Primary hyperoxaluria|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416|MedGen:C3661900] |
|
rs180177203
|
Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177208
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177210
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177211
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177214
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177217
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177225
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177236
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177238
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs180177243
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177244
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177247
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177248
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177248
|
Pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs180177250
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177252
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177253
|
- |
- |
|
rs180177253
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177259
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177262
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177263
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177264
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177269
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177272
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177277
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177279
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177284
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177287
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177288
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177289
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177290
|
- |
- |
|
rs180177290
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177292
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177303
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177312
|
Likely pathogenic |
Primary hyperoxaluria, type II [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599] |
|
rs180177314
|
Pathogenic |
Primary hyperoxaluria, type II|Primary hyperoxaluria|not provided [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416|MedGen:C3661900] |
|
rs180177322
|
- |
- |
|
rs180177322
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type II|not provided [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599|MedGen:C3661900] |
|
rs180177323
|
Likely pathogenic |
Primary hyperoxaluria, type II [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599] |
|
rs1823086297
|
Likely pathogenic |
Primary hyperoxaluria, type II [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599] |
|
rs182600362
|
- |
- |
|
rs1831150965
|
Likely pathogenic |
Hereditary fructosuria [Human Phenotype Ontology:HP:0005973,MONDO:MONDO:0009249,MedGen:C0016751,OMIM:229600,Orphanet:469] |
|
rs200244541
|
- |
- |
|
rs200544560
|
- |
- |
|
rs201934016
|
- |
- |
|
rs202103028
|
LP/P |
Neu-Laxova syndrome 2 (NLS2) [MIM:616038] |
|
rs2037432429
|
US |
Neurodevelopmental disorder with cardiomyopathy, spasticity, and brain abnormalities (NEDCASB) [MIM:619121] |
|
rs2058978388
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs2058986411
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs2066702
|
LB/B |
- |
|
rs2118343224
|
Pathogenic |
Hereditary fructosuria [Human Phenotype Ontology:HP:0005973,MONDO:MONDO:0009249,MedGen:C0016751,OMIM:229600,Orphanet:469] |
|
rs2135856711
|
Pathogenic |
Glycogen storage disease, type VII [MONDO:MONDO:0009295,MedGen:C0017926,OMIM:232800,Orphanet:371] |
|
rs2151019295
|
Pathogenic/Likely pathogenic |
HNSHA due to aldolase A deficiency [MONDO:MONDO:0012747,MedGen:C0272066,OMIM:611881,Orphanet:57] |
|
rs267606947
|
LP/P |
Phosphoglycerate dehydrogenase deficiency (PHGDHD) [MIM:601815] |
|
rs267606949
|
LP/P |
Phosphoglycerate dehydrogenase deficiency (PHGDHD) [MIM:601815] |
|
rs28730628
|
LB/B |
- |
|
rs34664134
|
- |
- |
|
rs34885252
|
LB/B |
- |
|
rs35385902
|
LB/B |
- |
|
rs367861880
|
- |
- |
|
rs372138644
|
- |
- |
|
rs372399525
|
- |
- |
|
rs374024099
|
- |
- |
|
rs376093116
|
- |
- |
|
rs376690171
|
- |
- |
|
rs377699817
|
- |
- |
|
rs4426527
|
LB/B |
- |
|
rs536205988
|
- |
- |
|
rs541509845
|
- |
- |
|
rs545372800
|
- |
- |
|
rs552474817
|
- |
- |
|
rs555935217
|
- |
- |
|
rs56251804
|
- |
- |
|
rs566453434
|
Pathogenic/Likely pathogenic |
not provided|Fructose-biphosphatase deficiency [MedGen:C3661900|MONDO:MONDO:0009251,MedGen:C0016756,OMIM:229700,Orphanet:348] |
|
rs587777775
|
Pathogenic |
Neu-Laxova syndrome 1 [MONDO:MONDO:0009736,MedGen:C4551478,OMIM:256520,Orphanet:2671,Orphanet:583607] |
|
rs587777777
|
LP/P |
Neu-Laxova syndrome 2 (NLS2) [MIM:616038] |
|
rs61729604
|
- |
- |
|
rs73106685
|
LB/B |
- |
|
rs74205173
|
- |
- |
|
rs74451421
|
- |
- |
|
rs747043550
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs747209153
|
- |
- |
|
rs748683840
|
- |
- |
|
rs749568989
|
- |
- |
|
rs750026492
|
Pathogenic/Likely pathogenic |
Hereditary fructosuria [Human Phenotype Ontology:HP:0005973,MONDO:MONDO:0009249,MedGen:C0016751,OMIM:229600,Orphanet:469] |
|
rs750389182
|
- |
- |
|
rs750905647
|
- |
- |
|
rs751223752
|
US |
Neurodevelopmental disorder with cardiomyopathy, spasticity, and brain abnormalities (NEDCASB) [MIM:619121] |
|
rs751972865
|
LP/P |
Erythrocytosis, familial, 8 (ECYT8) [MIM:222800] |
|
rs752807581
|
- |
- |
|
rs754079169
|
- |
- |
|
rs756437332
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs756704521
|
- |
- |
|
rs757746489
|
- |
- |
|
rs757985056
|
- |
- |
|
rs758066653
|
- |
- |
|
rs758609113
|
Pathogenic/Likely pathogenic |
not provided|Fructose-biphosphatase deficiency [MedGen:CN517202|MONDO:MONDO:0009251,MedGen:C0016756,OMIM:229700,Orphanet:348] |
|
rs75967634
|
- |
- |
|
rs759725155
|
- |
- |
|
rs759784953
|
- |
- |
|
rs759836341
|
- |
- |
|
rs760379773
|
- |
- |
|
rs760782027
|
- |
- |
|
rs761042153
|
- |
- |
|
rs762200045
|
- |
- |
|
rs762757818
|
- |
- |
|
rs763392896
|
- |
- |
|
rs765649468
|
- |
- |
|
rs765910470
|
- |
- |
|
rs766011995
|
- |
- |
|
rs768492092
|
- |
- |
|
rs768697532
|
- |
- |
|
rs769512330
|
- |
- |
|
rs769763635
|
- |
- |
|
rs769879612
|
- |
- |
|
rs771317809
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of aromatic-L-amino-acid decarboxylase [MedGen:C3661900|MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs771385956
|
- |
- |
|
rs774423823
|
- |
- |
|
rs779013628
|
- |
- |
|
rs780442649
|
- |
- |
|
rs780715532
|
- |
- |
|
rs781110394
|
- |
- |
|
rs781222092
|
Pathogenic |
Deficiency of bisphosphoglycerate mutase [MONDO:MONDO:0009113,MedGen:C1291620,OMIM:222800,Orphanet:714] |
|
rs781739244
|
- |
- |
|
rs782308462
|
LP/P |
Developmental and epileptic encephalopathy 51 (DEE51) [MIM:617339] |
|
rs78599516
|
- |
- |
|
rs786204545
|
- |
- |
|
rs786204545
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs78909145
|
- |
- |
|
rs796052057
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052059
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052060
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052061
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs796052062
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052063
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052064
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs796052065
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052066
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052079
|
- |
- |
|
rs796052079
|
Pathogenic |
Primary hyperoxaluria, type II [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599] |
|
rs866904446
|
Pathogenic/Likely pathogenic |
Glycogen storage disease, type VII [MONDO:MONDO:0009295,MedGen:C0017926,OMIM:232800,Orphanet:371] |
|
rs935315768
|
- |
- |
|
rs935725316
|
Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs964520949
|
- |
- |
|
rs971183744
|
- |
- |
rn00710
|
Carbon fixation in photosynthetic organisms
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Fructose-biphosphatase deficiency [MONDO:MONDO:0009251,MedGen:C0016756,OMIM:229700,Orphanet:348] |
|
-
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
-
|
LP/P |
Phosphoglycerate kinase 1 deficiency (PGK1D) [MIM:300653] |
|
.
|
- |
- |
|
rs113879010
|
Pathogenic/Likely pathogenic |
not provided|Primary hyperoxaluria, type I [MedGen:C3661900|MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs115014558
|
LB/B |
- |
|
rs1166067966
|
- |
- |
|
rs1176072053
|
- |
- |
|
rs1193034540
|
- |
- |
|
rs1213395414
|
- |
- |
|
rs121908521
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs121908528
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs121908529
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria|AGXT-related condition [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416|] |
|
rs121909534
|
Pathogenic |
HNSHA due to aldolase A deficiency [MONDO:MONDO:0012747,MedGen:C0272066,OMIM:611881,Orphanet:57] |
|
rs121918189
|
- |
- |
|
rs121918189
|
Pathogenic |
Fructose-biphosphatase deficiency [MONDO:MONDO:0009251,MedGen:C0016756,OMIM:229700,Orphanet:348] |
|
rs121918190
|
Pathogenic |
Fructose-biphosphatase deficiency [MONDO:MONDO:0009251,MedGen:C0016756,OMIM:229700,Orphanet:348] |
|
rs1304689724
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs13408961
|
LB/B |
- |
|
rs137852530
|
LB/B |
- |
|
rs137852533
|
LP/P |
Phosphoglycerate kinase 1 deficiency (PGK1D) [MIM:300653] |
|
rs137852539
|
Pathogenic |
Glycogen storage disease due to phosphoglycerate kinase 1 deficiency [MONDO:MONDO:0010392,MedGen:C1970848,OMIM:300653,Orphanet:713] |
|
rs140960775
|
- |
- |
|
rs140992177
|
LB/B |
- |
|
rs141623265
|
- |
- |
|
rs147495819
|
- |
- |
|
rs16952692
|
LB/B |
- |
|
rs180177155
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177156
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177156
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs180177157
|
- |
- |
|
rs180177157
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177161
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177162
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177163
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177173
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177182
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177186
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177191
|
- |
- |
|
rs180177191
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177195
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177197
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177198
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177199
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177202
|
Pathogenic |
Primary hyperoxaluria, type I|Primary hyperoxaluria|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416|MedGen:C3661900] |
|
rs180177203
|
Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177208
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177210
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177211
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177214
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177217
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177225
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177243
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177244
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177250
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177259
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177264
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177269
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177272
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177277
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177279
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177284
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177287
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177288
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177290
|
- |
- |
|
rs180177290
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177292
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177303
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs1831150965
|
Likely pathogenic |
Hereditary fructosuria [Human Phenotype Ontology:HP:0005973,MONDO:MONDO:0009249,MedGen:C0016751,OMIM:229600,Orphanet:469] |
|
rs184618766
|
- |
- |
|
rs200196486
|
- |
- |
|
rs200556774
|
- |
- |
|
rs202108064
|
- |
- |
|
rs2058986411
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs2118343224
|
Pathogenic |
Hereditary fructosuria [Human Phenotype Ontology:HP:0005973,MONDO:MONDO:0009249,MedGen:C0016751,OMIM:229600,Orphanet:469] |
|
rs2151019295
|
Pathogenic/Likely pathogenic |
HNSHA due to aldolase A deficiency [MONDO:MONDO:0012747,MedGen:C0272066,OMIM:611881,Orphanet:57] |
|
rs34664134
|
- |
- |
|
rs34885252
|
LB/B |
- |
|
rs372138644
|
- |
- |
|
rs372399525
|
- |
- |
|
rs376093116
|
- |
- |
|
rs376690171
|
- |
- |
|
rs4426527
|
LB/B |
- |
|
rs541509845
|
- |
- |
|
rs552474817
|
- |
- |
|
rs555935217
|
- |
- |
|
rs566453434
|
Pathogenic/Likely pathogenic |
not provided|Fructose-biphosphatase deficiency [MedGen:C3661900|MONDO:MONDO:0009251,MedGen:C0016756,OMIM:229700,Orphanet:348] |
|
rs61729604
|
- |
- |
|
rs73106685
|
LB/B |
- |
|
rs74205173
|
- |
- |
|
rs749568989
|
- |
- |
|
rs750026492
|
Pathogenic/Likely pathogenic |
Hereditary fructosuria [Human Phenotype Ontology:HP:0005973,MONDO:MONDO:0009249,MedGen:C0016751,OMIM:229600,Orphanet:469] |
|
rs750660594
|
- |
- |
|
rs750905647
|
- |
- |
|
rs752807581
|
- |
- |
|
rs755200974
|
- |
- |
|
rs756437332
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs756704521
|
- |
- |
|
rs758609113
|
Pathogenic/Likely pathogenic |
not provided|Fructose-biphosphatase deficiency [MedGen:CN517202|MONDO:MONDO:0009251,MedGen:C0016756,OMIM:229700,Orphanet:348] |
|
rs759836341
|
- |
- |
|
rs759933654
|
- |
- |
|
rs760185950
|
- |
- |
|
rs760379773
|
- |
- |
|
rs765910470
|
- |
- |
|
rs769206685
|
- |
- |
|
rs771385956
|
- |
- |
|
rs772424772
|
- |
- |
|
rs779013628
|
- |
- |
|
rs780442649
|
- |
- |
|
rs781739244
|
- |
- |
|
rs782308462
|
LP/P |
Developmental and epileptic encephalopathy 51 (DEE51) [MIM:617339] |
|
rs796052057
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052060
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052061
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs796052062
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052063
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs796052064
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs796052065
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs978865587
|
- |
- |
rn00720
|
Carbon fixation pathways in prokaryotes
|
dbSNP |
Type |
Disease name |
|
-
|
Pathogenic |
Paragangliomas 1 [MONDO:MONDO:0008192,MedGen:C3494181,OMIM:168000,Orphanet:29072] |
|
-
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
-
|
Likely pathogenic |
Deficiency of 3-hydroxyacyl-CoA dehydrogenase [MONDO:MONDO:0017715,MedGen:C1291230,OMIM:231530,Orphanet:309127,Orphanet:71212] |
|
-
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
-
|
Pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395] |
|
-
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type II|not provided [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599|MedGen:C3661900] |
|
-
|
Likely pathogenic |
Neural tube defects, folate-sensitive [MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
-
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
.
|
- |
- |
|
rs1018203291
|
- |
- |
|
rs1040177874
|
- |
- |
|
rs104886492
|
US |
HSD10 mitochondrial disease (HSD10MD) [MIM:300438] |
|
rs104894302
|
Pathogenic |
Paragangliomas 1|Hereditary cancer-predisposing syndrome|Paragangliomas with sensorineural hearing loss [MONDO:MONDO:0008192,MedGen:C3494181,OMIM:168000,Orphanet:29072|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MedGen:C1868633]; Cowden syndrome 3 [MONDO:MONDO:0014045,MedGen:CN166604,Orphanet:201]; Pheochromocytoma [Human Phenotype Ontology:HP:0002666,MONDO:MONDO:0008233,MedGen:C0031511,OMIM:171300,Orphanet:29072]; Carney-Stratakis syndrome [MONDO:MONDO:0011740,MedGen:C1847319,OMIM:606864,Orphanet:97286] |
|
rs1057519361
|
Pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395] |
|
rs1057519736
|
LB/B |
- |
|
rs1057519736
|
Pathogenic; risk factor |
Acute myeloid leukemia|Acute myocardial infarction [Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|MONDO:MONDO:0004781,MedGen:C0155626] |
|
rs1057519906
|
LB/B |
- |
|
rs1057519906
|
LP/P |
Glioma (GLM) [MIM:137800] |
|
rs1057519906
|
Likely pathogenic; risk factor |
Neoplasm of the large intestine|Neoplasm of brain|Brainstem glioma|Acute myeloid leukemia|Hepatocellular carcinoma|Acute myocardial infarction [Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MONDO:MONDO:0004781,MedGen:C0155626] |
|
rs1060503769
|
Pathogenic |
Carney-Stratakis syndrome [MONDO:MONDO:0011740,MedGen:C1847319,OMIM:606864,Orphanet:97286]; Pheochromocytoma [Human Phenotype Ontology:HP:0002666,MONDO:MONDO:0008233,MedGen:C0031511,OMIM:171300,Orphanet:29072]; Cowden syndrome 3 [MONDO:MONDO:0014045,MedGen:CN166604,Orphanet:201]; Paragangliomas with sensorineural hearing loss|Hereditary cancer-predisposing syndrome [MedGen:C1868633|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] |
|
rs1131691065
|
Pathogenic |
Hereditary cancer-predisposing syndrome|Pheochromocytoma [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0002666,MONDO:MONDO:0008233,MedGen:C0031511,OMIM:171300,Orphanet:29072]; Paragangliomas with sensorineural hearing loss [MedGen:C1868633]; Cowden syndrome 3 [MONDO:MONDO:0014045,MedGen:CN166604,Orphanet:201]; Carney-Stratakis syndrome|Mitochondrial complex 2 deficiency, nuclear type 3 [MONDO:MONDO:0011740,MedGen:C1847319,OMIM:606864,Orphanet:97286|MONDO:MONDO:0030937,MedGen:C5436934,OMIM:619167] |
|
rs1182635980
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs1182635980
|
Pathogenic/Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|Neural tube defects, folate-sensitive [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
rs120074141
|
LP/P |
3-ketothiolase deficiency (3KTD) [MIM:203750] |
|
rs1202368985
|
- |
- |
|
rs1209918450
|
- |
- |
|
rs1213395414
|
- |
- |
|
rs121434295
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs121434295
|
Pathogenic/Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|Schizophrenia [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|Human Phenotype Ontology:HP:0100753,MONDO:MONDO:0005090,MeSH:D012559,MedGen:C0036341,OMIM:181500]; Homocystinuria due to methylene tetrahydrofolate reductase deficiency [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395]; Thrombophilia due to thrombin defect [MONDO:MONDO:0008559,MedGen:C3160733,OMIM:188050]; Neural tube defects, folate-sensitive|Neural tube defects, folate-sensitive [MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
rs121434297
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs121434297
|
Pathogenic/Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|Neural tube defects, folate-sensitive [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
rs121913499
|
US |
Colorectal cancer |
|
rs121913499
|
Pathogenic/Likely pathogenic |
Lung adenocarcinoma|Breast neoplasm|Neoplasm of brain|Hepatocellular carcinoma|Astrocytoma|Medulloblastoma|Malignant melanoma of skin|Transitional cell carcinoma of the bladder|Neoplasm of the large intestine|Multiple myeloma|Prostate adenocarcinoma|Brainstem glioma|Glioblastoma|Myelodysplastic syndrome|Acute myeloid leukemia|Adenoid cystic carcinoma|not provided|Enchondromatosis|Enchondromatosis [Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0009592,MONDO:MONDO:0019781,MeSH:D001254,MedGen:C0004114|Human Phenotype Ontology:HP:0002885,MONDO:MONDO:0007959,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:616|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|MONDO:MONDO:0004971,MeSH:D003528,MedGen:C0010606|MedGen:C3661900|Human Phenotype Ontology:HP:0005701,MONDO:MONDO:0008145,MedGen:C0014084,OMIM:166000,Orphanet:296|Human Phenotype Ontology:HP:0005701,MONDO:MONDO:0008145,MedGen:C0014084,OMIM:166000,Orphanet:296]; Maffucci syndrome|Glioma susceptibility 1|Maffucci syndrome [MONDO:MONDO:0013808,MedGen:C0024454,OMIM:614569,Orphanet:163634|MONDO:MONDO:0024498,MedGen:C2750850,OMIM:137800|MONDO:MONDO:0013808,MedGen:C0024454,OMIM:614569,Orphanet:163634] |
|
rs121913500
|
US |
A glioma sample |
|
rs121913500
|
Pathogenic/Likely pathogenic |
Glioblastoma multiforme, somatic|Transitional cell carcinoma of the bladder|Myelodysplastic syndrome|Medulloblastoma|Malignant melanoma of skin|Hepatocellular carcinoma|Lung adenocarcinoma|Brainstem glioma|Breast neoplasm|Prostate adenocarcinoma|Multiple myeloma|Neoplasm of brain|Acute myeloid leukemia|Oligodendroglioma|Adenoid cystic carcinoma|Neoplasm of the large intestine|Astrocytoma|Glioblastoma|Metaphyseal chondromatosis with D-2-hydroxyglutaric aciduria|not provided|Glioma susceptibility 1|Enchondromatosis|Metaphyseal chondromatosis [MedGen:C4016231|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0002885,MONDO:MONDO:0007959,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:616|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0033681,MONDO:MONDO:0016695,MeSH:D009837,MedGen:C0028945,Orphanet:251627|MONDO:MONDO:0004971,MeSH:D003528,MedGen:C0010606|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0009592,MONDO:MONDO:0019781,MeSH:D001254,MedGen:C0004114|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0013941,MedGen:C3553958,OMIM:614875,Orphanet:99646|MedGen:C3661900|MONDO:MONDO:0024498,MedGen:C2750850,OMIM:137800|Human Phenotype Ontology:HP:0005701,MONDO:MONDO:0008145,MedGen:C0014084,OMIM:166000,Orphanet:296|] |
|
rs121913502
|
LP/P |
D-2-hydroxyglutaric aciduria 2 (D2HGA2) [MIM:613657] |
|
rs121913502
|
Pathogenic/Likely pathogenic |
D-2-hydroxyglutaric aciduria 2|Squamous cell carcinoma of the head and neck|not provided|Acute myeloid leukemia|Neoplasm of the large intestine|Myelodysplastic syndrome|Multiple myeloma|Inborn genetic diseases [MONDO:MONDO:0013345,MedGen:C3150909,OMIM:613657,Orphanet:79315|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MedGen:C3661900|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MeSH:D030342,MedGen:C0950123] |
|
rs121913503
|
Pathogenic/Likely pathogenic; risk factor |
Hepatocellular carcinoma|Acute myeloid leukemia|Neoplasm of the large intestine|Neoplasm of brain|Brainstem glioma|Acute myocardial infarction [Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|MONDO:MONDO:0004781,MedGen:C0155626] |
|
rs121913503
|
LP/P |
Glioma (GLM) [MIM:137800] |
|
rs121913503
|
Pathogenic/Likely pathogenic; risk factor |
Acute myeloid leukemia|Hepatocellular carcinoma|Neoplasm of brain|Myelodysplastic syndrome|Neoplasm of the large intestine|Brainstem glioma|Acute myocardial infarction [Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|MONDO:MONDO:0004781,MedGen:C0155626] |
|
rs1250941205
|
- |
- |
|
rs1252881714
|
- |
- |
|
rs1258494752
|
LP/P |
Pyruvate carboxylase deficiency (PC deficiency) [MIM:266150] |
|
rs1304729997
|
- |
- |
|
rs1305385953
|
- |
- |
|
rs1314085200
|
Pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395] |
|
rs1327662246
|
- |
- |
|
rs1357271377
|
US |
A colorectal cancer sample |
|
rs1360692694
|
- |
- |
|
rs137853096
|
LP/P |
D-bifunctional protein deficiency (DBPD) [MIM:261515] |
|
rs137853101
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs137853102
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs1392361503
|
Pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs139584437
|
- |
- |
|
rs139645527
|
Pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|Neural tube defects, folate-sensitive [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
rs141210410
|
LP/P |
Combined immunodeficiency and megaloblastic anemia with or without hyperhomocysteinemia (CIMAH) [MIM:617780] |
|
rs1423978863
|
Pathogenic |
Hereditary cancer-predisposing syndrome|Mitochondrial complex II deficiency, nuclear type 1 [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0100294,MedGen:C5700310,OMIM:252011,Orphanet:3208]; Paragangliomas 5 [MONDO:MONDO:0013602,MedGen:C3279992,OMIM:614165,Orphanet:29072] |
|
rs1437567292
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs144508139
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs145712373
|
- |
- |
|
rs145899443
|
- |
- |
|
rs150561917
|
- |
- |
|
rs1553185069
|
Likely pathogenic |
not provided|Homocystinuria due to methylene tetrahydrofolate reductase deficiency [MedGen:C3661900|MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395] |
|
rs1555015018
|
Likely pathogenic |
Pyruvate carboxylase deficiency [MONDO:MONDO:0009949,MedGen:C0034341,OMIM:266150,Orphanet:3008] |
|
rs1555336810
|
LP/P |
Combined immunodeficiency and megaloblastic anemia with or without hyperhomocysteinemia (CIMAH) [MIM:617780] |
|
rs1555337681
|
Likely pathogenic |
Combined immunodeficiency and megaloblastic anemia with or without hyperhomocysteinemia [MONDO:MONDO:0060611,MedGen:C4540434,OMIM:617780] |
|
rs1555629667
|
- |
- |
|
rs1555632876
|
- |
- |
|
rs1560992565
|
Pathogenic |
Mitochondrial complex II deficiency, nuclear type 1 [MONDO:MONDO:0100294,MedGen:C5700310,OMIM:252011,Orphanet:3208]; Paragangliomas 5|Hereditary cancer-predisposing syndrome|Paragangliomas 5 [MONDO:MONDO:0013602,MedGen:C3279992,OMIM:614165,Orphanet:29072|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0013602,MedGen:C3279992,OMIM:614165,Orphanet:29072] |
|
rs1561442127
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs1591374629
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1591374632
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1644355976
|
Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395] |
|
rs180177312
|
Likely pathogenic |
Primary hyperoxaluria, type II [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599] |
|
rs180177314
|
Pathogenic |
Primary hyperoxaluria, type II|Primary hyperoxaluria|not provided [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416|MedGen:C3661900] |
|
rs180177322
|
- |
- |
|
rs180177322
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type II|not provided [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599|MedGen:C3661900] |
|
rs180177323
|
Likely pathogenic |
Primary hyperoxaluria, type II [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599] |
|
rs1823086297
|
Likely pathogenic |
Primary hyperoxaluria, type II [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599] |
|
rs190087897
|
- |
- |
|
rs1950902
|
- |
- |
|
rs199476142
|
Pathogenic/Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|Neural tube defects, folate-sensitive [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
rs200100285
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs200137991
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs200137991
|
Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|not provided|Neural tube defects, folate-sensitive [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MedGen:C3661900|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
rs200688214
|
Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|not provided [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MedGen:C3661900] |
|
rs201524044
|
- |
- |
|
rs201865375
|
- |
- |
|
rs201865375
|
Pathogenic/Likely pathogenic |
Mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency|not provided [MONDO:MONDO:0014563,MedGen:C4225391,OMIM:616277,Orphanet:255241|MedGen:C3661900] |
|
rs202015012
|
- |
- |
|
rs2066472
|
LB/B |
- |
|
rs2134768688
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs2134768866
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs2146127288
|
Likely pathogenic |
Infantile cerebellar-retinal degeneration [MONDO:MONDO:0013802,MedGen:C3281192,OMIM:614559,Orphanet:313850] |
|
rs267606870
|
LP/P |
D-2-hydroxyglutaric aciduria 2 (D2HGA2) [MIM:613657] |
|
rs267606887
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs28940589
|
LP/P |
Pyruvate carboxylase deficiency (PC deficiency) [MIM:266150] |
|
rs28940590
|
LP/P |
Pyruvate carboxylase deficiency (PC deficiency) [MIM:266150] |
|
rs34181110
|
LB/B |
- |
|
rs367585605
|
Pathogenic/Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|Thrombophilia due to thrombin defect [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MONDO:MONDO:0008559,MedGen:C3160733,OMIM:188050]; Homocystinuria due to methylene tetrahydrofolate reductase deficiency [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395]; Neural tube defects, folate-sensitive [MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823]; Schizophrenia|Neural tube defects, folate-sensitive [Human Phenotype Ontology:HP:0100753,MONDO:MONDO:0005090,MeSH:D012559,MedGen:C0036341,OMIM:181500|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
rs367651399
|
- |
- |
|
rs367902441
|
- |
- |
|
rs370444838
|
LP/P |
Combined immunodeficiency and megaloblastic anemia with or without hyperhomocysteinemia (CIMAH) [MIM:617780] |
|
rs371582393
|
Likely pathogenic |
Mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency [MONDO:MONDO:0014563,MedGen:C4225391,OMIM:616277,Orphanet:255241] |
|
rs371834662
|
- |
- |
|
rs373398993
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs375032130
|
Pathogenic/Likely pathogenic |
not provided|Mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency|See cases [MedGen:C3661900|MONDO:MONDO:0014563,MedGen:C4225391,OMIM:616277,Orphanet:255241|] |
|
rs375266808
|
Pathogenic |
Mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency|not provided [MONDO:MONDO:0014563,MedGen:C4225391,OMIM:616277,Orphanet:255241|MedGen:C3661900] |
|
rs377518755
|
- |
- |
|
rs532952188
|
- |
- |
|
rs537907558
|
- |
- |
|
rs541517496
|
Pathogenic/Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs545086633
|
Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|Neural tube defects, folate-sensitive [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
rs550705310
|
- |
- |
|
rs577954688
|
- |
- |
|
rs74428123
|
- |
- |
|
rs745389409
|
- |
- |
|
rs745423719
|
- |
- |
|
rs747951792
|
- |
- |
|
rs748303093
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of acetyl-CoA acetyltransferase [MedGen:C3661900|MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs748571395
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs750195919
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs750510348
|
- |
- |
|
rs753816946
|
- |
- |
|
rs754015864
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs755024692
|
Pathogenic |
not provided|Optic atrophy 9 [MedGen:C3661900|MONDO:MONDO:0014571,MedGen:C4225384,OMIM:616289] |
|
rs757784497
|
- |
- |
|
rs758723288
|
Likely pathogenic |
Mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency|not provided|ECHS1-related condition [MONDO:MONDO:0014563,MedGen:C4225391,OMIM:616277,Orphanet:255241|MedGen:C3661900|] |
|
rs759031330
|
- |
- |
|
rs759031330
|
Pathogenic/Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395] |
|
rs760161369
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs760782027
|
- |
- |
|
rs763539350
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs763539350
|
Pathogenic/Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|Neural tube defects, folate-sensitive [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
rs764832926
|
- |
- |
|
rs765586205
|
Pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|Neural tube defects, folate-sensitive [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
rs767061831
|
Likely pathogenic |
D-2-hydroxyglutaric aciduria 2 [MONDO:MONDO:0013345,MedGen:C3150909,OMIM:613657,Orphanet:79315] |
|
rs768448235
|
- |
- |
|
rs769381688
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs770028533
|
- |
- |
|
rs771978838
|
LP/P |
Combined immunodeficiency and megaloblastic anemia with or without hyperhomocysteinemia (CIMAH) [MIM:617780] |
|
rs775829502
|
- |
- |
|
rs779135938
|
Likely pathogenic |
Deficiency of 3-hydroxyacyl-CoA dehydrogenase|Hyperinsulinemic hypoglycemia|Hyperinsulinemic hypoglycemia, familial, 4 [MONDO:MONDO:0017715,MedGen:C1291230,OMIM:231530,Orphanet:309127,Orphanet:71212|Human Phenotype Ontology:HP:0000825,MONDO:MONDO:0005803,MedGen:C1864903,OMIM:PS256450,Orphanet:443095|MONDO:MONDO:0012382,MedGen:C1864948,OMIM:609975,Orphanet:71212] |
|
rs781739244
|
- |
- |
|
rs781834702
|
- |
- |
|
rs781837455
|
- |
- |
|
rs782010539
|
- |
- |
|
rs782308462
|
LP/P |
Developmental and epileptic encephalopathy 51 (DEE51) [MIM:617339] |
|
rs782487022
|
- |
- |
|
rs786202403
|
Pathogenic/Likely pathogenic |
Hereditary cancer-predisposing syndrome|Pheochromocytoma [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0002666,MONDO:MONDO:0008233,MedGen:C0031511,OMIM:171300,Orphanet:29072]; Cowden syndrome 3 [MONDO:MONDO:0014045,MedGen:CN166604,Orphanet:201]; Carney-Stratakis syndrome [MONDO:MONDO:0011740,MedGen:C1847319,OMIM:606864,Orphanet:97286]; Paragangliomas with sensorineural hearing loss [MedGen:C1868633] |
|
rs786204014
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs786204017
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs786204018
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs786204021
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs786204023
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs786205145
|
Likely pathogenic |
Carney triad [MONDO:MONDO:0011424,MedGen:C1858592,OMIM:604287,Orphanet:139411] |
|
rs796064510
|
Pathogenic |
not provided|Combined immunodeficiency and megaloblastic anemia with or without hyperhomocysteinemia [MedGen:CN517202|MONDO:MONDO:0060611,MedGen:C4540434,OMIM:617780] |
|
rs80338847
|
Pathogenic |
Paragangliomas 1|Hereditary pheochromocytoma-paraganglioma|not provided [MONDO:MONDO:0008192,MedGen:C3494181,OMIM:168000,Orphanet:29072|MONDO:MONDO:0017366,MedGen:C1708353,Orphanet:29072|MedGen:CN517202] |
|
rs80338847
|
Likely pathogenic |
Paragangliomas with sensorineural hearing loss [MedGen:C1868633]; Carney-Stratakis syndrome [MONDO:MONDO:0011740,MedGen:C1847319,OMIM:606864,Orphanet:97286]; Cowden syndrome 3 [MONDO:MONDO:0014045,MedGen:CN166604,Orphanet:201]; Pheochromocytoma [Human Phenotype Ontology:HP:0002666,MONDO:MONDO:0008233,MedGen:C0031511,OMIM:171300,Orphanet:29072] |
|
rs886037927
|
Likely pathogenic |
HSD10 mitochondrial disease [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295] |
|
rs983672500
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
hsa00730
|
Thiamine metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
Pathogenic |
Spondyloenchondrodysplasia with immune dysregulation [MONDO:MONDO:0011939,MedGen:C1842763,OMIM:607944,Orphanet:1855] |
|
-
|
Likely pathogenic |
Childhood encephalopathy due to thiamine pyrophosphokinase deficiency [MONDO:MONDO:0013761,MedGen:C3280866,OMIM:614458,Orphanet:293955] |
|
.
|
- |
- |
|
rs1048994
|
LB/B |
- |
|
rs1315885236
|
- |
- |
|
rs1328237103
|
- |
- |
|
rs137976988
|
- |
- |
|
rs1393887224
|
- |
- |
|
rs1417315589
|
Pathogenic |
Childhood encephalopathy due to thiamine pyrophosphokinase deficiency [MONDO:MONDO:0013761,MedGen:C3280866,OMIM:614458,Orphanet:293955] |
|
rs142179752
|
- |
- |
|
rs148550603
|
- |
- |
|
rs200755203
|
- |
- |
|
rs202038293
|
- |
- |
|
rs2145087630
|
Pathogenic |
Spondyloenchondrodysplasia with immune dysregulation [MONDO:MONDO:0011939,MedGen:C1842763,OMIM:607944,Orphanet:1855] |
|
rs371271054
|
LP/P |
Thiamine metabolism dysfunction syndrome 5, episodic encephalopathy type (THMD5) [MIM:614458] |
|
rs372014965
|
- |
- |
|
rs372045419
|
- |
- |
|
rs377376739
|
- |
- |
|
rs387906935
|
Pathogenic |
Childhood encephalopathy due to thiamine pyrophosphokinase deficiency [MONDO:MONDO:0013761,MedGen:C3280866,OMIM:614458,Orphanet:293955] |
|
rs548817584
|
- |
- |
|
rs551699564
|
- |
- |
|
rs553481936
|
- |
- |
|
rs557557314
|
- |
- |
|
rs746133481
|
- |
- |
|
rs747262651
|
- |
- |
|
rs752838693
|
- |
- |
|
rs754829627
|
- |
- |
|
rs767122676
|
- |
- |
|
rs773782019
|
- |
- |
|
rs777305206
|
- |
- |
|
rs781050795
|
Pathogenic/Likely pathogenic |
Spondyloenchondrodysplasia with immune dysregulation|Inborn genetic diseases|ACP5-related condition [MONDO:MONDO:0011939,MedGen:C1842763,OMIM:607944,Orphanet:1855|MeSH:D030342,MedGen:C0950123|] |
|
rs965741395
|
Pathogenic |
Spondyloenchondrodysplasia with immune dysregulation [MONDO:MONDO:0011939,MedGen:C1842763,OMIM:607944,Orphanet:1855] |
hsa00740
|
Riboflavin metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
Pathogenic |
Spondyloenchondrodysplasia with immune dysregulation [MONDO:MONDO:0011939,MedGen:C1842763,OMIM:607944,Orphanet:1855] |
|
.
|
- |
- |
|
rs1016829826
|
- |
- |
|
rs104893950
|
Pathogenic |
Lafora disease|not provided|Progressive myoclonic epilepsy|Inborn genetic diseases [MONDO:MONDO:0009697,MedGen:C0751783,OMIM:254780,OMIM:PS254780,Orphanet:501|MedGen:C3661900|MONDO:MONDO:0020074,MedGen:C0751778,OMIM:PS254800,Orphanet:308,Orphanet:98261|MeSH:D030342,MedGen:C0950123] |
|
rs1050916
|
LB/B |
- |
|
rs1270571213
|
LP/P |
Interstitial nephritis, karyomegalic (KMIN) [MIM:614817] |
|
rs1272212207
|
- |
- |
|
rs1298964491
|
- |
- |
|
rs138692014
|
- |
- |
|
rs139843463
|
- |
- |
|
rs142179752
|
- |
- |
|
rs147984615
|
- |
- |
|
rs148550603
|
- |
- |
|
rs199532729
|
- |
- |
|
rs200478856
|
- |
- |
|
rs200755203
|
- |
- |
|
rs201053542
|
Pathogenic |
Progressive myoclonic epilepsy [MONDO:MONDO:0020074,MedGen:C0751778,OMIM:PS254800,Orphanet:308,Orphanet:98261] |
|
rs202203713
|
- |
- |
|
rs2145087630
|
Pathogenic |
Spondyloenchondrodysplasia with immune dysregulation [MONDO:MONDO:0011939,MedGen:C1842763,OMIM:607944,Orphanet:1855] |
|
rs369323241
|
- |
- |
|
rs371840002
|
- |
- |
|
rs372045419
|
- |
- |
|
rs373442940
|
- |
- |
|
rs373875697
|
- |
- |
|
rs3745207
|
- |
- |
|
rs376587143
|
- |
- |
|
rs387906595
|
Pathogenic |
Hyperbiliverdinemia [MONDO:MONDO:0013595,MedGen:C3279964,OMIM:614156,Orphanet:276405] |
|
rs387906596
|
Pathogenic |
Hyperbiliverdinemia|not provided [MONDO:MONDO:0013595,MedGen:C3279964,OMIM:614156,Orphanet:276405|MedGen:CN517202] |
|
rs387907279
|
Pathogenic |
Karyomegalic interstitial nephritis|not provided [MONDO:MONDO:0013898,MedGen:C3553774,OMIM:614817,Orphanet:401996|MedGen:C3661900] |
|
rs387907280
|
Pathogenic |
Karyomegalic interstitial nephritis [MONDO:MONDO:0013898,MedGen:C3553774,OMIM:614817,Orphanet:401996] |
|
rs530962130
|
- |
- |
|
rs564873625
|
- |
- |
|
rs575921260
|
- |
- |
|
rs72483511
|
- |
- |
|
rs745602817
|
- |
- |
|
rs746133481
|
- |
- |
|
rs746699081
|
- |
- |
|
rs748277180
|
- |
- |
|
rs751350053
|
- |
- |
|
rs751703979
|
LP/P |
Interstitial nephritis, karyomegalic (KMIN) [MIM:614817] |
|
rs753721054
|
- |
- |
|
rs754008203
|
- |
- |
|
rs754406296
|
- |
- |
|
rs755595790
|
- |
- |
|
rs757591198
|
- |
- |
|
rs758350061
|
- |
- |
|
rs758630770
|
- |
- |
|
rs762589841
|
- |
- |
|
rs763832285
|
- |
- |
|
rs764887891
|
- |
- |
|
rs765995843
|
- |
- |
|
rs766600401
|
- |
- |
|
rs767651793
|
Pathogenic |
Karyomegalic interstitial nephritis [MONDO:MONDO:0013898,MedGen:C3553774,OMIM:614817,Orphanet:401996] |
|
rs771776626
|
- |
- |
|
rs773780893
|
- |
- |
|
rs774420692
|
- |
- |
|
rs775030116
|
- |
- |
|
rs778265977
|
- |
- |
|
rs781050795
|
Pathogenic/Likely pathogenic |
Spondyloenchondrodysplasia with immune dysregulation|Inborn genetic diseases|ACP5-related condition [MONDO:MONDO:0011939,MedGen:C1842763,OMIM:607944,Orphanet:1855|MeSH:D030342,MedGen:C0950123|] |
|
rs781585781
|
- |
- |
|
rs865805057
|
- |
- |
|
rs953653119
|
Pathogenic |
Karyomegalic interstitial nephritis [MONDO:MONDO:0013898,MedGen:C3553774,OMIM:614817,Orphanet:401996] |
|
rs965741395
|
Pathogenic |
Spondyloenchondrodysplasia with immune dysregulation [MONDO:MONDO:0011939,MedGen:C1842763,OMIM:607944,Orphanet:1855] |
hsa00750
|
Vitamin B6 metabolism
|
dbSNP |
Type |
Disease name |
|
.
|
- |
- |
|
rs1212627309
|
- |
- |
|
rs1363187738
|
- |
- |
|
rs140180293
|
- |
- |
|
rs1419468984
|
- |
- |
|
rs146027425
|
Pathogenic/Likely pathogenic |
not provided|Pyridoxal phosphate-responsive seizures [MedGen:C3661900|MONDO:MONDO:0012407,MedGen:C1864723,OMIM:610090,Orphanet:79096] |
|
rs147928683
|
- |
- |
|
rs150771380
|
- |
- |
|
rs201859570
|
- |
- |
|
rs267606958
|
Pathogenic |
Pyridoxal phosphate-responsive seizures [MONDO:MONDO:0012407,MedGen:C1864723,OMIM:610090,Orphanet:79096] |
|
rs377592729
|
- |
- |
|
rs745419881
|
- |
- |
|
rs755926926
|
- |
- |
|
rs757480516
|
- |
- |
|
rs757480516
|
LP/P |
Neuropathy, hereditary motor and sensory, 6C, with optic atrophy (HMSN6C) [MIM:618511] |
|
rs758065277
|
- |
- |
|
rs759139777
|
- |
- |
|
rs775520000
|
- |
- |
hsa00760
|
Nicotinate and nicotinamide metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Succinic semialdehyde dehydrogenase deficiency (SSADHD) [MIM:271980] |
|
-
|
Pathogenic |
Succinate-semialdehyde dehydrogenase deficiency [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22] |
|
-
|
LP/P |
Leber congenital amaurosis 9 (LCA9) [MIM:608553] |
|
-
|
Pathogenic |
Leber congenital amaurosis 9 [MONDO:MONDO:0012056,MedGen:C1837873,OMIM:608553,Orphanet:65] |
|
-
|
US |
Spastic paraplegia 45, autosomal recessive (SPG45) [MIM:613162] |
|
-
|
Likely pathogenic |
Purine-nucleoside phosphorylase deficiency [MONDO:MONDO:0013171,MedGen:C0268125,OMIM:613179,Orphanet:760] |
|
-
|
LP/P |
Interstitial nephritis, karyomegalic (KMIN) [MIM:614817] |
|
-
|
Likely pathogenic |
Vertebral, cardiac, renal, and limb defects syndrome 3 [MONDO:MONDO:0030077,MedGen:C5394250,OMIM:618845] |
|
.
|
- |
- |
|
rs104894451
|
LP/P |
Purine nucleoside phosphorylase deficiency (PNPD) [MIM:613179] |
|
rs104894452
|
LP/P |
Purine nucleoside phosphorylase deficiency (PNPD) [MIM:613179] |
|
rs117225217
|
- |
- |
|
rs118203982
|
Pathogenic |
Succinate-semialdehyde dehydrogenase deficiency|not provided [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22|MedGen:C3661900] |
|
rs1183750325
|
- |
- |
|
rs1220952473
|
- |
- |
|
rs1230592431
|
- |
- |
|
rs1232923691
|
- |
- |
|
rs1244511644
|
LP/P |
Leber congenital amaurosis 9 (LCA9) [MIM:608553] |
|
rs1247497521
|
Pathogenic/Likely pathogenic |
not provided|Purine-nucleoside phosphorylase deficiency [MedGen:C3661900|MONDO:MONDO:0013171,MedGen:C0268125,OMIM:613179,Orphanet:760] |
|
rs1270571213
|
LP/P |
Interstitial nephritis, karyomegalic (KMIN) [MIM:614817] |
|
rs1291114278
|
- |
- |
|
rs1301217000
|
- |
- |
|
rs1314529783
|
- |
- |
|
rs1326526453
|
- |
- |
|
rs1326526453
|
LP/P |
Succinic semialdehyde dehydrogenase deficiency (SSADHD) [MIM:271980] |
|
rs1345605596
|
Pathogenic |
Leber congenital amaurosis 9 [MONDO:MONDO:0012056,MedGen:C1837873,OMIM:608553,Orphanet:65] |
|
rs1350026845
|
- |
- |
|
rs138613460
|
LP/P |
Leber congenital amaurosis 9 (LCA9) [MIM:608553] |
|
rs138630257
|
- |
- |
|
rs139152162
|
- |
- |
|
rs1398420394
|
Likely pathogenic |
Purine-nucleoside phosphorylase deficiency [MONDO:MONDO:0013171,MedGen:C0268125,OMIM:613179,Orphanet:760] |
|
rs1405020783
|
Likely pathogenic |
Leber congenital amaurosis 9 [MONDO:MONDO:0012056,MedGen:C1837873,OMIM:608553,Orphanet:65] |
|
rs1419090736
|
Pathogenic |
Hereditary spastic paraplegia 45 [MONDO:MONDO:0013165,MedGen:C3888209,OMIM:613162,Orphanet:320396] |
|
rs1419468984
|
- |
- |
|
rs144139747
|
LP/P |
Vertebral, cardiac, renal, and limb defects syndrome 3 (VCRL3) [MIM:618845] |
|
rs145087265
|
LP/P |
Succinic semialdehyde dehydrogenase deficiency (SSADHD) [MIM:271980] |
|
rs147984615
|
- |
- |
|
rs1482391482
|
- |
- |
|
rs150771380
|
- |
- |
|
rs1553128102
|
Likely pathogenic |
Leber congenital amaurosis [MONDO:MONDO:0018998,MeSH:D057130,MedGen:C0339527,OMIM:PS204000,Orphanet:65] |
|
rs1553196096
|
Pathogenic/Likely pathogenic |
not provided|Macrothrombocytopenia-lymphedema-developmental delay-facial dysmorphism-camptodactyly syndrome|Abnormality of blood and blood-forming tissues [MedGen:C3661900|MONDO:MONDO:0014757,MedGen:C4225222,OMIM:616737,Orphanet:487796|Human Phenotype Ontology:HP:0001871,Human Phenotype Ontology:HP:0003135,MedGen:C0850715]; Neurodevelopmental abnormality [Human Phenotype Ontology:HP:0012759,MedGen:C4022737]; Postnatal growth retardation [Human Phenotype Ontology:HP:0008844,Human Phenotype Ontology:HP:0008865,Human Phenotype Ontology:HP:0008868,Human Phenotype Ontology:HP:0008897,Human Phenotype Ontology:HP:0008901,Human Phenotype Ontology:HP:0008918,MedGen:C1859778]; Abnormality of the immune system [Human Phenotype Ontology:HP:0002715,Human Phenotype Ontology:HP:0003257,Human Phenotype Ontology:HP:0003346,Human Phenotype Ontology:HP:0010986,MedGen:C4021753]; Abnormal facial shape [Human Phenotype Ontology:HP:0001999,Human Phenotype Ontology:HP:0002004,Human Phenotype Ontology:HP:0002260,Human Phenotype Ontology:HP:0004643,Human Phenotype Ontology:HP:0004649,Human Phenotype Ontology:HP:0004652,Human Phenotype Ontology:HP:0004655,Human Phenotype Ontology:HP:0004675,Human Phenotype Ontology:HP:0005124,MedGen:C0424503] |
|
rs1594427504
|
Likely pathogenic |
not provided|Purine-nucleoside phosphorylase deficiency [MedGen:CN517202|MONDO:MONDO:0013171,MedGen:C0268125,OMIM:613179,Orphanet:760] |
|
rs1641702737
|
Likely pathogenic |
Leber congenital amaurosis 9 [MONDO:MONDO:0012056,MedGen:C1837873,OMIM:608553,Orphanet:65] |
|
rs1641789657
|
Likely pathogenic |
Leber congenital amaurosis 9 [MONDO:MONDO:0012056,MedGen:C1837873,OMIM:608553,Orphanet:65] |
|
rs1641966303
|
Likely pathogenic |
Leber congenital amaurosis 9 [MONDO:MONDO:0012056,MedGen:C1837873,OMIM:608553,Orphanet:65] |
|
rs1641967500
|
Likely pathogenic |
Leber congenital amaurosis 9 [MONDO:MONDO:0012056,MedGen:C1837873,OMIM:608553,Orphanet:65] |
|
rs1764675543
|
Pathogenic |
Succinate-semialdehyde dehydrogenase deficiency [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22] |
|
rs199532729
|
- |
- |
|
rs200017623
|
- |
- |
|
rs201859570
|
- |
- |
|
rs2062351829
|
Likely pathogenic |
Karyomegalic interstitial nephritis [MONDO:MONDO:0013898,MedGen:C3553774,OMIM:614817,Orphanet:401996] |
|
rs2127385894
|
Pathogenic |
Succinate-semialdehyde dehydrogenase deficiency [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22] |
|
rs35007971
|
LB/B |
- |
|
rs367982076
|
- |
- |
|
rs368115694
|
Pathogenic/Likely pathogenic |
Vertebral, cardiac, renal, and limb defects syndrome 3 [MONDO:MONDO:0030077,MedGen:C5394250,OMIM:618845] |
|
rs369323241
|
- |
- |
|
rs369842187
|
- |
- |
|
rs370273690
|
LP/P |
Glucocorticoid deficiency 4 with or without mineralocorticoid deficiency (GCCD4) [MIM:614736] |
|
rs370539470
|
- |
- |
|
rs371526758
|
Pathogenic |
Leber congenital amaurosis 9|not provided [MONDO:MONDO:0012056,MedGen:C1837873,OMIM:608553,Orphanet:65|MedGen:C3661900] |
|
rs373124776
|
- |
- |
|
rs374232934
|
- |
- |
|
rs374377399
|
- |
- |
|
rs375628463
|
LP/P |
Succinic semialdehyde dehydrogenase deficiency (SSADHD) [MIM:271980] |
|
rs376788669
|
- |
- |
|
rs376938314
|
- |
- |
|
rs376989086
|
- |
- |
|
rs387907234
|
LP/P |
Glucocorticoid deficiency 4 with or without mineralocorticoid deficiency (GCCD4) [MIM:614736] |
|
rs387907280
|
Pathogenic |
Karyomegalic interstitial nephritis [MONDO:MONDO:0013898,MedGen:C3553774,OMIM:614817,Orphanet:401996] |
|
rs387907291
|
LP/P |
Leber congenital amaurosis 9 (LCA9) [MIM:608553] |
|
rs387907293
|
LP/P |
Leber congenital amaurosis 9 (LCA9) [MIM:608553] |
|
rs539726091
|
- |
- |
|
rs552997428
|
- |
- |
|
rs564873625
|
- |
- |
|
rs574124428
|
- |
- |
|
rs587777173
|
Pathogenic |
Hereditary spastic paraplegia 45|not provided [MONDO:MONDO:0013165,MedGen:C3888209,OMIM:613162,Orphanet:320396|MedGen:C3661900] |
|
rs62621664
|
LB/B |
- |
|
rs62621664
|
Likely pathogenic |
Succinate-semialdehyde dehydrogenase deficiency [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22] |
|
rs72552283
|
LP/P |
Succinic semialdehyde dehydrogenase deficiency (SSADHD) [MIM:271980] |
|
rs745572671
|
- |
- |
|
rs746163132
|
- |
- |
|
rs746316064
|
- |
- |
|
rs747280993
|
- |
- |
|
rs748170674
|
Pathogenic |
Succinate-semialdehyde dehydrogenase deficiency [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22] |
|
rs748277180
|
- |
- |
|
rs748902766
|
Pathogenic/Likely pathogenic |
not provided|Retinal dystrophy|Leber congenital amaurosis 9 [MedGen:C3661900|Human Phenotype Ontology:HP:0000556,Human Phenotype Ontology:HP:0007736,Human Phenotype Ontology:HP:0007910,Human Phenotype Ontology:HP:0007974,Human Phenotype Ontology:HP:0007982,MONDO:MONDO:0019118,MeSH:D058499,MedGen:C0854723,Orphanet:71862|MONDO:MONDO:0012056,MedGen:C1837873,OMIM:608553,Orphanet:65] |
|
rs751350053
|
- |
- |
|
rs751703979
|
LP/P |
Interstitial nephritis, karyomegalic (KMIN) [MIM:614817] |
|
rs751888532
|
Pathogenic/Likely pathogenic |
Succinate-semialdehyde dehydrogenase deficiency|not provided|ALDH5A1-related condition [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22|MedGen:C3661900|] |
|
rs752007321
|
- |
- |
|
rs752258545
|
- |
- |
|
rs752868920
|
- |
- |
|
rs753068609
|
- |
- |
|
rs755423829
|
- |
- |
|
rs757187379
|
- |
- |
|
rs759139777
|
- |
- |
|
rs759515320
|
- |
- |
|
rs760802318
|
- |
- |
|
rs761948762
|
LP/P |
Leber congenital amaurosis 9 (LCA9) [MIM:608553] |
|
rs762589841
|
- |
- |
|
rs762680502
|
- |
- |
|
rs763325435
|
- |
- |
|
rs763325435
|
LP/P |
Leber congenital amaurosis 9 (LCA9) [MIM:608553] |
|
rs764453448
|
Pathogenic |
Hereditary spastic paraplegia 45 [MONDO:MONDO:0013165,MedGen:C3888209,OMIM:613162,Orphanet:320396] |
|
rs765408826
|
- |
- |
|
rs765561257
|
LP/P |
Succinic semialdehyde dehydrogenase deficiency (SSADHD) [MIM:271980] |
|
rs765995843
|
- |
- |
|
rs766274630
|
- |
- |
|
rs766479905
|
- |
- |
|
rs767485367
|
- |
- |
|
rs767651793
|
Pathogenic |
Karyomegalic interstitial nephritis [MONDO:MONDO:0013898,MedGen:C3553774,OMIM:614817,Orphanet:401996] |
|
rs768444187
|
- |
- |
|
rs770543578
|
- |
- |
|
rs771336246
|
LP/P |
Leber congenital amaurosis 9 (LCA9) [MIM:608553] |
|
rs771336246
|
Pathogenic/Likely pathogenic |
Retinal dystrophy|Leber congenital amaurosis 9|not provided|Spondyloepiphyseal dysplasia, sensorineural hearing loss, impaired intellectual development, and leber congenital amaurosis [Human Phenotype Ontology:HP:0000556,Human Phenotype Ontology:HP:0007736,Human Phenotype Ontology:HP:0007910,Human Phenotype Ontology:HP:0007974,Human Phenotype Ontology:HP:0007982,MONDO:MONDO:0019118,MeSH:D058499,MedGen:C0854723,Orphanet:71862|MONDO:MONDO:0012056,MedGen:C1837873,OMIM:608553,Orphanet:65|MedGen:C3661900|MONDO:MONDO:0031007,MedGen:C5543257,OMIM:619260,Orphanet:611207] |
|
rs771776626
|
- |
- |
|
rs772361710
|
- |
- |
|
rs773649594
|
- |
- |
|
rs774496720
|
- |
- |
|
rs775032909
|
- |
- |
|
rs775316562
|
- |
- |
|
rs775682684
|
- |
- |
|
rs779174928
|
LB/B |
- |
|
rs781117491
|
- |
- |
|
rs781585781
|
- |
- |
|
rs864309721
|
LP/P |
Takenouchi-Kosaki syndrome (TKS) [MIM:616737] |
|
rs886043944
|
- |
- |
|
rs896550845
|
- |
- |
|
rs896550845
|
Pathogenic |
Purine-nucleoside phosphorylase deficiency [MONDO:MONDO:0013171,MedGen:C0268125,OMIM:613179,Orphanet:760] |
|
rs906284769
|
Pathogenic/Likely pathogenic |
not specified|Succinate-semialdehyde dehydrogenase deficiency|not provided [MedGen:CN169374|MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22|MedGen:C3661900] |
|
rs953653119
|
Pathogenic |
Karyomegalic interstitial nephritis [MONDO:MONDO:0013898,MedGen:C3553774,OMIM:614817,Orphanet:401996] |
|
rs964309225
|
LB/B |
- |
hsa00770
|
Pantothenate and CoA biosynthesis
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Neurodegeneration with brain iron accumulation 1 (NBIA1) [MIM:234200] |
|
-
|
Likely pathogenic |
Pigmentary pallidal degeneration [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850] |
|
-
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
-
|
Likely pathogenic |
Dihydropyrimidine dehydrogenase deficiency [MONDO:MONDO:0010130,MedGen:C1959620,OMIM:274270,Orphanet:1675] |
|
-
|
LP/P |
Microphthalmia, isolated, 8 (MCOP8) [MIM:615113] |
|
-
|
Likely pathogenic |
Isolated microphthalmia 8 [MONDO:MONDO:0014050,MedGen:C3554524,OMIM:615113,Orphanet:2542] |
|
-
|
Likely pathogenic |
Developmental and epileptic encephalopathy 89 [MONDO:MONDO:0030856,MedGen:C5436853,OMIM:619124] |
|
.
|
- |
- |
|
rs1057516671
|
Likely pathogenic |
Dihydropyrimidine dehydrogenase deficiency [MONDO:MONDO:0010130,MedGen:C1959620,OMIM:274270,Orphanet:1675] |
|
rs1057518915
|
Pathogenic |
Neurodegeneration|Hypoprebetalipoproteinemia, acanthocytosis, retinitis pigmentosa, and pallidal degeneration [Human Phenotype Ontology:HP:0002180,MONDO:MONDO:0005559,MedGen:C0027746|MONDO:MONDO:0011798,MedGen:C1846582,OMIM:607236,Orphanet:157855] |
|
rs111863748
|
Likely pathogenic |
Pigmentary pallidal degeneration [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850] |
|
rs115638369
|
- |
- |
|
rs1170817007
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1180276212
|
- |
- |
|
rs1212037891
|
- |
- |
|
rs121912707
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Seizure|Pyridoxine-dependent epilepsy caused by ALDH7A1 mutant [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|Human Phenotype Ontology:HP:0001250,Human Phenotype Ontology:HP:0001275,Human Phenotype Ontology:HP:0001303,Human Phenotype Ontology:HP:0002125,Human Phenotype Ontology:HP:0002182,Human Phenotype Ontology:HP:0002279,Human Phenotype Ontology:HP:0002306,Human Phenotype Ontology:HP:0002348,Human Phenotype Ontology:HP:0002391,Human Phenotype Ontology:HP:0002417,Human Phenotype Ontology:HP:0002430,Human Phenotype Ontology:HP:0002431,Human Phenotype Ontology:HP:0002432,Human Phenotype Ontology:HP:0002434,Human Phenotype Ontology:HP:0002437,Human Phenotype Ontology:HP:0002466,Human Phenotype Ontology:HP:0002479,Human Phenotype Ontology:HP:0002794,Human Phenotype Ontology:HP:0006997,Human Phenotype Ontology:HP:0010520,MedGen:C0036572|MONDO:MONDO:0020741,MedGen:CN293409] |
|
rs121912711
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs1220524211
|
- |
- |
|
rs1220608789
|
Likely pathogenic |
Dihydropyrimidine dehydrogenase deficiency [MONDO:MONDO:0010130,MedGen:C1959620,OMIM:274270,Orphanet:1675] |
|
rs1234657138
|
- |
- |
|
rs1250997630
|
Pathogenic/Likely pathogenic |
Pigmentary pallidal degeneration|not provided [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850|MedGen:C3661900] |
|
rs1255326315
|
- |
- |
|
rs1270571213
|
LP/P |
Interstitial nephritis, karyomegalic (KMIN) [MIM:614817] |
|
rs1311982393
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs137852959
|
LP/P |
Neurodegeneration with brain iron accumulation 1 (NBIA1) [MIM:234200] |
|
rs137852959
|
Pathogenic |
Pigmentary pallidal degeneration|Neurodegeneration with brain iron accumulation 1, atypical|Hypoprebetalipoproteinemia, acanthocytosis, retinitis pigmentosa, and pallidal degeneration|not provided|Inborn genetic diseases|Retinitis pigmentosa|Pigmentary pallidal degeneration [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850|MedGen:C2751506|MONDO:MONDO:0011798,MedGen:C1846582,OMIM:607236,Orphanet:157855|MedGen:C3661900|MeSH:D030342,MedGen:C0950123|Human Phenotype Ontology:HP:0000547,MONDO:MONDO:0019200,MeSH:D012174,MedGen:C0035334,OMIM:268000,OMIM:PS268000,Orphanet:791|MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850]; Hypoprebetalipoproteinemia, acanthocytosis, retinitis pigmentosa, and pallidal degeneration [MONDO:MONDO:0011798,MedGen:C1846582,OMIM:607236,Orphanet:157855] |
|
rs137852961
|
Pathogenic/Likely pathogenic |
Pigmentary pallidal degeneration|not provided [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850|MedGen:C3661900] |
|
rs137852962
|
- |
- |
|
rs137852962
|
LP/P |
Neurodegeneration with brain iron accumulation 1 (NBIA1) [MIM:234200] |
|
rs137852963
|
Likely pathogenic |
Pigmentary pallidal degeneration [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850] |
|
rs140602333
|
- |
- |
|
rs143474105
|
- |
- |
|
rs1467808566
|
- |
- |
|
rs147984615
|
- |
- |
|
rs1555787646
|
Pathogenic |
Pigmentary pallidal degeneration|not provided [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850|MedGen:C3661900] |
|
rs1555787799
|
Pathogenic |
Pigmentary pallidal degeneration [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850] |
|
rs1557776329
|
LP/P |
Cardiomyopathy, dilated, 2C (CMD2C) [MIM:618189] |
|
rs1557778277
|
LP/P |
Cardiomyopathy, dilated, 2C (CMD2C) [MIM:618189] |
|
rs1568575271
|
Likely pathogenic |
Pigmentary pallidal degeneration [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850] |
|
rs1750309299
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1750388096
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1801266
|
- |
- |
|
rs199532729
|
- |
- |
|
rs201948406
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Inborn genetic diseases [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs2090674561
|
Likely pathogenic |
Pigmentary pallidal degeneration [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850] |
|
rs2146872522
|
Pathogenic |
Pigmentary pallidal degeneration [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850] |
|
rs368327291
|
- |
- |
|
rs369323241
|
- |
- |
|
rs372056651
|
- |
- |
|
rs372660425
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs387907280
|
Pathogenic |
Karyomegalic interstitial nephritis [MONDO:MONDO:0013898,MedGen:C3553774,OMIM:614817,Orphanet:401996] |
|
rs45523444
|
LB/B |
- |
|
rs45562238
|
LB/B |
- |
|
rs45624336
|
LB/B |
- |
|
rs527580106
|
- |
- |
|
rs547918064
|
- |
- |
|
rs547918064
|
Likely pathogenic |
not provided|Isolated microphthalmia 8 [MedGen:C3661900|MONDO:MONDO:0014050,MedGen:C3554524,OMIM:615113,Orphanet:2542] |
|
rs56005131
|
- |
- |
|
rs564873625
|
- |
- |
|
rs568056192
|
- |
- |
|
rs59086055
|
- |
- |
|
rs749866079
|
LP/P |
Hypervalinemia and hyperleucine-isoleucinemia (HVLI) [MIM:618850] |
|
rs750176786
|
LP/P |
Neurodegeneration with brain iron accumulation 1 (NBIA1) [MIM:234200] |
|
rs751703979
|
LP/P |
Interstitial nephritis, karyomegalic (KMIN) [MIM:614817] |
|
rs751841116
|
- |
- |
|
rs756684474
|
- |
- |
|
rs758607966
|
- |
- |
|
rs759622635
|
- |
- |
|
rs761295869
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs761752621
|
- |
- |
|
rs762589841
|
- |
- |
|
rs765582096
|
- |
- |
|
rs765995843
|
- |
- |
|
rs767651793
|
Pathogenic |
Karyomegalic interstitial nephritis [MONDO:MONDO:0013898,MedGen:C3553774,OMIM:614817,Orphanet:401996] |
|
rs768488292
|
- |
- |
|
rs771776626
|
- |
- |
|
rs773503933
|
- |
- |
|
rs773996303
|
- |
- |
|
rs776421832
|
- |
- |
|
rs776973423
|
- |
- |
|
rs777414421
|
Pathogenic |
Pigmentary pallidal degeneration [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850] |
|
rs780634137
|
- |
- |
|
rs781507152
|
- |
- |
|
rs781585781
|
- |
- |
|
rs796052271
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs863223343
|
Pathogenic |
Retinitis pigmentosa [Human Phenotype Ontology:HP:0000547,MONDO:MONDO:0019200,MeSH:D012174,MedGen:C0035334,OMIM:268000,OMIM:PS268000,Orphanet:791] |
|
rs864622558
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs985028365
|
- |
- |
hsa00780
|
Biotin metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Pigmentary pallidal degeneration [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850] |
|
.
|
- |
- |
|
rs1220524211
|
- |
- |
|
rs1250997630
|
Pathogenic/Likely pathogenic |
Pigmentary pallidal degeneration|not provided [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850|MedGen:C3661900] |
|
rs1255326315
|
- |
- |
|
rs137852959
|
Pathogenic |
Pigmentary pallidal degeneration|Neurodegeneration with brain iron accumulation 1, atypical|Hypoprebetalipoproteinemia, acanthocytosis, retinitis pigmentosa, and pallidal degeneration|not provided|Inborn genetic diseases|Retinitis pigmentosa|Pigmentary pallidal degeneration [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850|MedGen:C2751506|MONDO:MONDO:0011798,MedGen:C1846582,OMIM:607236,Orphanet:157855|MedGen:C3661900|MeSH:D030342,MedGen:C0950123|Human Phenotype Ontology:HP:0000547,MONDO:MONDO:0019200,MeSH:D012174,MedGen:C0035334,OMIM:268000,OMIM:PS268000,Orphanet:791|MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850]; Hypoprebetalipoproteinemia, acanthocytosis, retinitis pigmentosa, and pallidal degeneration [MONDO:MONDO:0011798,MedGen:C1846582,OMIM:607236,Orphanet:157855] |
|
rs137852962
|
- |
- |
|
rs137852962
|
Pathogenic |
Pigmentary pallidal degeneration [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850] |
|
rs137852963
|
Likely pathogenic |
Pigmentary pallidal degeneration [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850] |
|
rs144457204
|
- |
- |
|
rs148026894
|
- |
- |
|
rs1568575271
|
Likely pathogenic |
Pigmentary pallidal degeneration [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850] |
|
rs2090674561
|
Likely pathogenic |
Pigmentary pallidal degeneration [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850] |
|
rs370433029
|
- |
- |
|
rs748930040
|
- |
- |
|
rs752767411
|
- |
- |
|
rs758607966
|
- |
- |
|
rs761752621
|
- |
- |
|
rs763857057
|
- |
- |
|
rs768488292
|
- |
- |
|
rs773996303
|
- |
- |
|
rs80133417
|
- |
- |
|
rs863223343
|
Pathogenic |
Retinitis pigmentosa [Human Phenotype Ontology:HP:0000547,MONDO:MONDO:0019200,MeSH:D012174,MedGen:C0035334,OMIM:268000,OMIM:PS268000,Orphanet:791] |
|
rs887438250
|
- |
- |
hsa00785
|
Lipoic acid metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
-
|
US |
Maple syrup urine disease 1A (MSUD1A) [MIM:248600] |
|
-
|
LP/P |
Pyruvate dehydrogenase E1-alpha deficiency (PDHAD) [MIM:312170] |
|
-
|
Likely pathogenic |
Pyruvate dehydrogenase E1-beta deficiency [MONDO:MONDO:0013580,MedGen:C3279841,OMIM:614111,Orphanet:255138,Orphanet:765] |
|
-
|
Likely pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
.
|
- |
- |
|
rs1040238997
|
- |
- |
|
rs121964988
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs121964991
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs121964993
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs121964999
|
Pathogenic/Likely pathogenic |
not provided|Maple syrup urine disease|See cases|Maple syrup urine disease type 2 [MedGen:C3661900|MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511||MONDO:MONDO:0023693,MedGen:C1855371,OMIM:620699] |
|
rs121965002
|
Pathogenic |
Maple syrup urine disease type 2 [MONDO:MONDO:0023693,MedGen:C1855371,OMIM:620699] |
|
rs1256830271
|
- |
- |
|
rs1272572107
|
Pathogenic/Likely pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs1303770209
|
Pathogenic/Likely pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs137852873
|
US |
Maple syrup urine disease 1A (MSUD1A) [MIM:248600] |
|
rs137853258
|
LP/P |
Pyruvate dehydrogenase E1-alpha deficiency (PDHAD) [MIM:312170] |
|
rs1555933963
|
Pathogenic/Likely pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency|not provided|Pyruvate dehydrogenase complex deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243|MedGen:C3661900|MONDO:MONDO:0019169,MedGen:C0034345,OMIM:PS312170,Orphanet:765,Orphanet:79243] |
|
rs1661796496
|
Likely pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs182923857
|
LP/P |
Maple syrup urine disease 1A (MSUD1A) [MIM:248600] |
|
rs191644614
|
- |
- |
|
rs200969445
|
Pathogenic |
Oligosynaptic infertility|Azoospermia|Spermatogenic failure 70 [MONDO:MONDO:0009776,MedGen:C0403810,OMIM:258150,Orphanet:217034|Human Phenotype Ontology:HP:0000027,MONDO:MONDO:0100459,MeSH:D053713,MedGen:C0004509|MONDO:MONDO:0030733,MedGen:C5676962,OMIM:619828] |
|
rs2032247686
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs2032282970
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs2063174067
|
LP/P |
Pyruvate dehydrogenase E1-alpha deficiency (PDHAD) [MIM:312170] |
|
rs2063189233
|
Pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs2063213272
|
Pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs2100779419
|
Pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs2100779875
|
Likely pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs2100797134
|
Pathogenic |
Maple syrup urine disease type 2|Maple syrup urine disease [MONDO:MONDO:0023693,MedGen:C1855371,OMIM:620699|MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs2147176072
|
Likely pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs2147178249
|
Pathogenic |
not provided|Pyruvate dehydrogenase E1-alpha deficiency [MedGen:C3661900|MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs2147180839
|
Likely pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs2147180851
|
Likely pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs2147184502
|
Likely pathogenic |
Pyruvate dehydrogenase E1-alpha deficiency [MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs371807385
|
- |
- |
|
rs398123503
|
LP/P |
Maple syrup urine disease 1A (MSUD1A) [MIM:248600] |
|
rs398123503
|
Pathogenic/Likely pathogenic |
Maple syrup urine disease|not provided [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511|MedGen:C3661900] |
|
rs398123675
|
Pathogenic |
not provided|Maple syrup urine disease [MedGen:C3661900|MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs546847108
|
- |
- |
|
rs748682601
|
Pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs750594890
|
Pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs755461904
|
- |
- |
|
rs757087726
|
Pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs761996996
|
Pathogenic/Likely pathogenic |
Maple syrup urine disease|not provided [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511|MedGen:C3661900] |
|
rs765045050
|
Likely pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs765257706
|
Likely pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs769688327
|
LP/P |
Maple syrup urine disease 1A (MSUD1A) [MIM:248600] |
|
rs773048903
|
Pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs776400068
|
- |
- |
|
rs863224149
|
Pathogenic |
not provided|Pyruvate dehydrogenase E1-alpha deficiency [MedGen:C3661900|MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243] |
|
rs863224150
|
Pathogenic |
not provided|Pyruvate dehydrogenase E1-alpha deficiency|Pyruvate dehydrogenase complex deficiency [MedGen:C3661900|MONDO:MONDO:0010717,MedGen:C1839413,OMIM:312170,Orphanet:79243|MONDO:MONDO:0019169,MedGen:C0034345,OMIM:PS312170,Orphanet:765,Orphanet:79243] |
|
rs869312125
|
Pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
hsa00790
|
Folate biosynthesis
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
-
|
LP/P |
Segawa syndrome autosomal recessive (ARSEGS) [MIM:605407] |
|
-
|
Likely pathogenic |
Autosomal recessive DOPA responsive dystonia [MONDO:MONDO:0011551,MedGen:C2673535,OMIM:605407,Orphanet:101150] |
|
.
|
- |
- |
|
rs1048994
|
LB/B |
- |
|
rs1056892
|
LB/B |
- |
|
rs1057520384
|
LP/P |
Segawa syndrome autosomal recessive (ARSEGS) [MIM:605407] |
|
rs113351006
|
- |
- |
|
rs114664885
|
- |
- |
|
rs11545078
|
LB/B |
- |
|
rs118203925
|
LP/P |
Non-phenylketonuria hyperphenylalaninemia (Non-PKU HPA) [MIM:261600] |
|
rs120074176
|
- |
- |
|
rs121908605
|
LP/P |
Molybdenum cofactor deficiency, complementation group B (MOCODB) [MIM:252160] |
|
rs121917746
|
Pathogenic |
Dopa-responsive dystonia due to sepiapterin reductase deficiency [MONDO:MONDO:0012994,MedGen:C0268468,OMIM:612716,Orphanet:70594] |
|
rs121917765
|
LP/P |
Segawa syndrome autosomal recessive (ARSEGS) [MIM:605407] |
|
rs1231529155
|
Pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1254633416
|
- |
- |
|
rs1260079066
|
- |
- |
|
rs1260079066
|
Pathogenic |
Autosomal recessive DOPA responsive dystonia [MONDO:MONDO:0011551,MedGen:C2673535,OMIM:605407,Orphanet:101150] |
|
rs1315885236
|
- |
- |
|
rs1318565860
|
- |
- |
|
rs13222
|
LP/P |
46,XY sex reversal 8 (SRXY8) [MIM:614279] |
|
rs1328237103
|
- |
- |
|
rs1328320990
|
LP/P |
Hyperphenylalaninemia, BH4-deficient, A (HPABH4A) [MIM:261640] |
|
rs1355039694
|
- |
- |
|
rs1366239043
|
- |
- |
|
rs137976988
|
- |
- |
|
rs138112128
|
- |
- |
|
rs138675307
|
- |
- |
|
rs1393887224
|
- |
- |
|
rs1428589694
|
LP/P |
Segawa syndrome autosomal recessive (ARSEGS) [MIM:605407] |
|
rs146938082
|
- |
- |
|
rs1486763160
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs1490005005
|
- |
- |
|
rs149295644
|
- |
- |
|
rs1554922441
|
Likely pathogenic |
Autosomal recessive DOPA responsive dystonia [MONDO:MONDO:0011551,MedGen:C2673535,OMIM:605407,Orphanet:101150] |
|
rs1555203737
|
Pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1555209575
|
Pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1564317029
|
- |
- |
|
rs1565846805
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1565846863
|
Pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1565846899
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1565866547
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1592988883
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs1874693635
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1877437661
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs199475567
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs199475579
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs199475580
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs199475582
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs199475598
|
LP/P |
Hyperphenylalaninemia (HPA) [MIM:261600] |
|
rs199475610
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs199475630
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs199475634
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs199475639
|
Pathogenic |
not provided|Phenylketonuria [MedGen:CN517202|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs199475643
|
LP/P |
Hyperphenylalaninemia (HPA) [MIM:261600] |
|
rs199475651
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs199475654
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs199475660
|
Pathogenic/Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs199475678
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs200908381
|
- |
- |
|
rs201716388
|
- |
- |
|
rs2136702181
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs2233213
|
LB/B |
- |
|
rs2233215
|
LB/B |
- |
|
rs281865438
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs281865454
|
Pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs2835285
|
LB/B |
- |
|
rs369106912
|
- |
- |
|
rs370245703
|
- |
- |
|
rs372014965
|
- |
- |
|
rs374871539
|
Likely pathogenic |
6-Pyruvoyl-tetrahydrobiopterin synthase deficiency [MONDO:MONDO:0009863,MedGen:C0878676,OMIM:261640,Orphanet:13,Orphanet:238583] |
|
rs377376739
|
- |
- |
|
rs387906619
|
LP/P |
Megaloblastic anemia due to dihydrofolate reductase deficiency (DHFRD) [MIM:613839] |
|
rs387907200
|
Pathogenic |
Dopa-responsive dystonia due to sepiapterin reductase deficiency [MONDO:MONDO:0012994,MedGen:C0268468,OMIM:612716,Orphanet:70594] |
|
rs5030841
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs5030842
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs5030846
|
Pathogenic |
Phenylketonuria|not provided|PAH-related condition|Inborn genetic diseases [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716|MedGen:C3661900||MeSH:D030342,MedGen:C0950123] |
|
rs5030847
|
- |
- |
|
rs5030847
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs5030851
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs528348849
|
- |
- |
|
rs548817584
|
- |
- |
|
rs553481936
|
- |
- |
|
rs557557314
|
- |
- |
|
rs62507326
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62507332
|
Pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62507335
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62507338
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:CN517202|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62507340
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62507347
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62508573
|
Pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62508578
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62508580
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62508588
|
- |
- |
|
rs62508588
|
LP/P |
Non-phenylketonuria hyperphenylalaninemia (Non-PKU HPA) [MIM:261600] |
|
rs62508694
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62508698
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62508698
|
Pathogenic |
Phenylketonuria|not provided|Inborn genetic diseases|Polymicrogyria, perisylvian, with cerebellar hypoplasia and arthrogryposis [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716|MedGen:C3661900|MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0014679,MedGen:C4225295,OMIM:616531] |
|
rs62508731
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:CN517202|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62508734
|
Pathogenic |
Phenylketonuria|not provided [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716|MedGen:C3661900] |
|
rs62508739
|
Pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62508752
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62509017
|
Pathogenic/Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62514902
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62514957
|
- |
- |
|
rs62514957
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62514958
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62514959
|
Pathogenic |
Phenylketonuria|not provided [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716|MedGen:C3661900] |
|
rs62516062
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62517181
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62635346
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62642916
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62642918
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62642928
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62642930
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62642931
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62642934
|
LP/P |
Non-phenylketonuria hyperphenylalaninemia (Non-PKU HPA) [MIM:261600] |
|
rs62642942
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62642944
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62644503
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs74503222
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs74603784
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs746203167
|
- |
- |
|
rs748337823
|
Pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs749485571
|
- |
- |
|
rs751203209
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs75193786
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs752132182
|
- |
- |
|
rs752311258
|
- |
- |
|
rs752838693
|
- |
- |
|
rs754829627
|
- |
- |
|
rs76212747
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs762949770
|
Pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs763329185
|
- |
- |
|
rs76394784
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs767122676
|
- |
- |
|
rs767453024
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs770790692
|
- |
- |
|
rs772613221
|
- |
- |
|
rs773782019
|
- |
- |
|
rs775137066
|
- |
- |
|
rs777305206
|
- |
- |
|
rs781200594
|
- |
- |
|
rs782266548
|
- |
- |
|
rs782328441
|
- |
- |
|
rs796052017
|
LP/P |
Hyperphenylalaninemia (HPA) [MIM:261600] |
|
rs796064502
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs953539388
|
- |
- |
hsa00830
|
Retinol metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Microphthalmia, isolated, 8 (MCOP8) [MIM:615113] |
|
-
|
LP/P |
Diaphragmatic hernia 4, with cardiovascular defects (DIH4) [MIM:620025] |
|
-
|
Pathogenic |
Diaphragmatic hernia 4, with cardiovascular defects [MONDO:MONDO:0859571,MedGen:C5774210,OMIM:620025] |
|
-
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
.
|
- |
- |
|
rs1041969
|
LB/B |
- |
|
rs1057516269
|
Likely pathogenic |
Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs1057910
|
- |
- |
|
rs1126673
|
- |
- |
|
rs1166600686
|
- |
- |
|
rs117111102
|
- |
- |
|
rs118203757
|
- |
- |
|
rs1200476864
|
- |
- |
|
rs1202368985
|
- |
- |
|
rs1220952473
|
- |
- |
|
rs1229984
|
LB/B |
- |
|
rs12414460
|
- |
- |
|
rs1257727040
|
- |
- |
|
rs1265148467
|
- |
- |
|
rs12721627
|
LB/B |
- |
|
rs12721629
|
LB/B |
- |
|
rs1273711073
|
- |
- |
|
rs1276511608
|
- |
- |
|
rs1278639064
|
- |
- |
|
rs1307944675
|
Pathogenic |
Perrault syndrome 1 [MONDO:MONDO:0009300,MedGen:C4551721,OMIM:233400,Orphanet:2855] |
|
rs1309748501
|
- |
- |
|
rs13222
|
Pathogenic |
46,XY disorder of sex development due to testicular 17,20-desmolase deficiency [Gene:6994,MONDO:MONDO:0013664,MedGen:C1839840,OMIM:614279,Orphanet:443087] |
|
rs138105638
|
- |
- |
|
rs138112316
|
- |
- |
|
rs138142612
|
LB/B |
- |
|
rs138675307
|
- |
- |
|
rs1392361503
|
Pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs139238143
|
- |
- |
|
rs139250712
|
- |
- |
|
rs140111676
|
- |
- |
|
rs1405313151
|
- |
- |
|
rs141489852
|
- |
- |
|
rs141774245
|
- |
- |
|
rs144457204
|
- |
- |
|
rs145669559
|
- |
- |
|
rs145774441
|
- |
- |
|
rs145889928
|
- |
- |
|
rs1471862905
|
- |
- |
|
rs1477251308
|
- |
- |
|
rs148593307
|
- |
- |
|
rs1486164573
|
- |
- |
|
rs149081683
|
- |
- |
|
rs149229670
|
- |
- |
|
rs149295644
|
- |
- |
|
rs149408684
|
- |
- |
|
rs149916677
|
- |
- |
|
rs1554062814
|
- |
- |
|
rs1554770634
|
- |
- |
|
rs1561442127
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs1564317029
|
- |
- |
|
rs17134592
|
- |
- |
|
rs17884712
|
LB/B |
- |
|
rs1815413655
|
LP/P |
Vitamin D-dependent rickets 3 (VDDR3) [MIM:619073] |
|
rs184571563
|
- |
- |
|
rs192154563
|
LB/B |
- |
|
rs199558694
|
- |
- |
|
rs200183364
|
- |
- |
|
rs200346442
|
- |
- |
|
rs200965026
|
- |
- |
|
rs201045618
|
- |
- |
|
rs201286895
|
- |
- |
|
rs201859570
|
- |
- |
|
rs201934016
|
- |
- |
|
rs2066702
|
LB/B |
- |
|
rs28371759
|
LB/B |
- |
|
rs28730628
|
LB/B |
- |
|
rs3208363
|
LB/B |
- |
|
rs35128788
|
- |
- |
|
rs35385902
|
LB/B |
- |
|
rs367826293
|
- |
- |
|
rs367861880
|
- |
- |
|
rs368758960
|
- |
- |
|
rs368767518
|
- |
- |
|
rs370433029
|
- |
- |
|
rs374810645
|
- |
- |
|
rs374926260
|
- |
- |
|
rs375805362
|
- |
- |
|
rs377699817
|
- |
- |
|
rs41286880
|
- |
- |
|
rs41286884
|
- |
- |
|
rs41291556
|
LB/B |
- |
|
rs4986910
|
LB/B |
- |
|
rs4987161
|
LB/B |
- |
|
rs543931018
|
- |
- |
|
rs550705310
|
- |
- |
|
rs55785340
|
LB/B |
- |
|
rs55951658
|
LB/B |
- |
|
rs56199635
|
LB/B |
- |
|
rs56251804
|
- |
- |
|
rs56324128
|
LB/B |
- |
|
rs56337013
|
LB/B |
- |
|
rs574462231
|
- |
- |
|
rs57505750
|
- |
- |
|
rs59734894
|
- |
- |
|
rs67784355
|
LB/B |
- |
|
rs72552267
|
LB/B |
- |
|
rs72552799
|
LB/B |
- |
|
rs72558189
|
- |
- |
|
rs72558191
|
Pathogenic |
Warfarin response [MONDO:MONDO:0007390,MedGen:C0750384,OMIM:122700] |
|
rs72558192
|
- |
- |
|
rs74451421
|
- |
- |
|
rs747209153
|
- |
- |
|
rs749485571
|
- |
- |
|
rs749574339
|
- |
- |
|
rs750389182
|
- |
- |
|
rs753270728
|
- |
- |
|
rs756271054
|
- |
- |
|
rs75967634
|
- |
- |
|
rs761042153
|
- |
- |
|
rs763392896
|
- |
- |
|
rs763625282
|
- |
- |
|
rs763857057
|
- |
- |
|
rs764137538
|
- |
- |
|
rs765456449
|
- |
- |
|
rs766107094
|
- |
- |
|
rs768697532
|
- |
- |
|
rs768830601
|
- |
- |
|
rs769763635
|
- |
- |
|
rs772780687
|
- |
- |
|
rs774168721
|
- |
- |
|
rs774997677
|
- |
- |
|
rs775766910
|
Likely pathogenic |
not provided|Bifunctional peroxisomal enzyme deficiency|Perrault syndrome [MedGen:C3661900|MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300|MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs776567184
|
- |
- |
|
rs776908257
|
- |
- |
|
rs777237591
|
- |
- |
|
rs779989195
|
- |
- |
|
rs780039093
|
- |
- |
|
rs780109022
|
- |
- |
|
rs781200594
|
- |
- |
|
rs781583846
|
- |
- |
|
rs781873036
|
- |
- |
|
rs782421321
|
- |
- |
|
rs782742874
|
- |
- |
|
rs79500998
|
- |
- |
|
rs80133417
|
- |
- |
|
rs887438250
|
- |
- |
hsa00860
|
Porphyrin metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Hereditary coproporphyria (HCP) [MIM:121300] |
|
-
|
LP/P |
Hepatoerythropoietic porphyria (HEP) [MIM:176100] |
|
-
|
Likely pathogenic |
Familial porphyria cutanea tarda [MONDO:MONDO:0008296,MedGen:C0268323,OMIM:176100,Orphanet:101330,Orphanet:443062] |
|
-
|
LP/P |
Protoporphyria, erythropoietic, 1 (EPP1) [MIM:177000] |
|
-
|
Pathogenic/Likely pathogenic |
Protoporphyria, erythropoietic, 1|not provided [MONDO:MONDO:0008319,MedGen:C4692546,OMIM:177000,Orphanet:79278|MedGen:C3661900] |
|
-
|
Likely pathogenic |
Methylmalonic aciduria, cblB type [MONDO:MONDO:0009614,MedGen:C1855102,OMIM:251110,Orphanet:28,Orphanet:79311] |
|
-
|
LP/P |
Congenital erythropoietic porphyria (CEP) [MIM:263700] |
|
-
|
Pathogenic |
Heme oxygenase 1 deficiency [MONDO:MONDO:0013536,MedGen:C1841651,OMIM:614034,Orphanet:562509] |
|
.
|
- |
- |
|
rs1016829826
|
- |
- |
|
rs1050916
|
LB/B |
- |
|
rs1055019947
|
LP/P |
Protoporphyria, erythropoietic, 1 (EPP1) [MIM:177000] |
|
rs11541962
|
LB/B |
- |
|
rs11541963
|
LB/B |
- |
|
rs12144752
|
LB/B |
- |
|
rs121908014
|
- |
- |
|
rs121908014
|
LP/P |
Congenital erythropoietic porphyria (CEP) [MIM:263700] |
|
rs121908020
|
LP/P |
Congenital erythropoietic porphyria (CEP) [MIM:263700] |
|
rs121908021
|
LP/P |
Congenital erythropoietic porphyria (CEP) [MIM:263700] |
|
rs121917866
|
LP/P |
Hereditary coproporphyria (HCP) [MIM:121300] |
|
rs121917868
|
LP/P |
Harderoporphyria (HARPO) [MIM:618892] |
|
rs121917868
|
Pathogenic/Likely pathogenic |
Harderoporphyria|not provided|Harderoporphyria [MONDO:MONDO:0030048,MedGen:C0342859,OMIM:618892|MedGen:C3661900|MONDO:MONDO:0030048,MedGen:C0342859,OMIM:618892]; Hereditary coproporphyria [MONDO:MONDO:0007369,MedGen:C0162531,OMIM:121300,Orphanet:79273] |
|
rs121917872
|
LP/P |
Hereditary coproporphyria (HCP) [MIM:121300] |
|
rs121917874
|
LP/P |
Hereditary coproporphyria (HCP) [MIM:121300] |
|
rs121918058
|
LP/P |
Familial porphyria cutanea tarda (FPCT) [MIM:176100] |
|
rs121918063
|
LP/P |
Familial porphyria cutanea tarda (FPCT) [MIM:176100] |
|
rs1239820083
|
- |
- |
|
rs1263674373
|
- |
- |
|
rs1288116010
|
LP/P |
Leukodystrophy, hypomyelinating, 15 (HLD15) [MIM:617951] |
|
rs138479596
|
- |
- |
|
rs139388833
|
LP/P |
Congenital erythropoietic porphyria (CEP) [MIM:263700] |
|
rs139843463
|
- |
- |
|
rs1400665585
|
- |
- |
|
rs146269992
|
Pathogenic |
Protoporphyria, erythropoietic, 1|not provided [MONDO:MONDO:0008319,MedGen:C4692546,OMIM:177000,Orphanet:79278|MedGen:C3661900] |
|
rs1474000585
|
US |
Leukodystrophy, hypomyelinating, 15 (HLD15) [MIM:617951] |
|
rs1590007244
|
Pathogenic |
Cutaneous porphyria [MONDO:MONDO:0009902,MedGen:C0162530,OMIM:263700,Orphanet:79277] |
|
rs17153561
|
LB/B |
- |
|
rs17173752
|
LB/B |
- |
|
rs199535572
|
- |
- |
|
rs199554283
|
- |
- |
|
rs199925121
|
- |
- |
|
rs200164081
|
- |
- |
|
rs200322717
|
- |
- |
|
rs200520127
|
- |
- |
|
rs201596112
|
- |
- |
|
rs201826432
|
LP/P |
Hereditary coproporphyria (HCP) [MIM:121300] |
|
rs2136192612
|
Pathogenic |
Methylmalonic aciduria, cblB type [MONDO:MONDO:0009614,MedGen:C1855102,OMIM:251110,Orphanet:28,Orphanet:79311] |
|
rs2136195113
|
Pathogenic |
Methylmalonic aciduria, cblB type [MONDO:MONDO:0009614,MedGen:C1855102,OMIM:251110,Orphanet:28,Orphanet:79311] |
|
rs2136198139
|
Likely pathogenic |
Methylmalonic aciduria, cblB type [MONDO:MONDO:0009614,MedGen:C1855102,OMIM:251110,Orphanet:28,Orphanet:79311] |
|
rs28941774
|
LP/P |
Congenital erythropoietic porphyria (CEP) [MIM:263700] |
|
rs28941775
|
- |
- |
|
rs28941775
|
LP/P |
Congenital erythropoietic porphyria (CEP) [MIM:263700] |
|
rs28941784
|
LP/P |
Methylmalonic aciduria type cblB (MMAB) [MIM:251110] |
|
rs3745207
|
- |
- |
|
rs375923779
|
- |
- |
|
rs376128990
|
LP/P |
Methylmalonic aciduria type cblB (MMAB) [MIM:251110] |
|
rs387906595
|
Pathogenic |
Hyperbiliverdinemia [MONDO:MONDO:0013595,MedGen:C3279964,OMIM:614156,Orphanet:276405] |
|
rs387906596
|
Pathogenic |
Hyperbiliverdinemia|not provided [MONDO:MONDO:0013595,MedGen:C3279964,OMIM:614156,Orphanet:276405|MedGen:CN517202] |
|
rs397515528
|
LP/P |
Congenital erythropoietic porphyria (CEP) [MIM:263700] |
|
rs398124434
|
Pathogenic/Likely pathogenic |
Methylmalonic aciduria, cblB type|not provided [MONDO:MONDO:0009614,MedGen:C1855102,OMIM:251110,Orphanet:28,Orphanet:79311|MedGen:C3661900] |
|
rs5030752
|
LB/B |
- |
|
rs553893770
|
- |
- |
|
rs746219370
|
Pathogenic |
Methylmalonic aciduria, cblB type|not provided|Inborn genetic diseases [MONDO:MONDO:0009614,MedGen:C1855102,OMIM:251110,Orphanet:28,Orphanet:79311|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs749758687
|
LP/P |
Methylmalonic aciduria type cblB (MMAB) [MIM:251110] |
|
rs753721054
|
- |
- |
|
rs755082661
|
- |
- |
|
rs756414548
|
Pathogenic/Likely pathogenic |
not provided|Methylmalonic aciduria, cblB type|Methylmalonic acidemia [MedGen:C3661900|MONDO:MONDO:0009614,MedGen:C1855102,OMIM:251110,Orphanet:28,Orphanet:79311|Human Phenotype Ontology:HP:0002912,Human Phenotype Ontology:HP:0003123,Human Phenotype Ontology:HP:0008295,MONDO:MONDO:0002012,MeSH:C537358,MedGen:C0268583] |
|
rs757322062
|
- |
- |
|
rs757591198
|
- |
- |
|
rs759347283
|
LP/P |
Hereditary coproporphyria (HCP) [MIM:121300] |
|
rs762617943
|
LP/P |
Familial porphyria cutanea tarda (FPCT) [MIM:176100] |
|
rs763832285
|
- |
- |
|
rs764176279
|
- |
- |
|
rs765518889
|
Likely pathogenic |
Protoporphyria, erythropoietic, 1|not provided [MONDO:MONDO:0008319,MedGen:C4692546,OMIM:177000,Orphanet:79278|MedGen:C3661900] |
|
rs765537459
|
Pathogenic/Likely pathogenic |
Leukodystrophy, hypomyelinating, 15|not provided [MONDO:MONDO:0054782,MedGen:C4693733,OMIM:617951|MedGen:C3661900] |
|
rs766540245
|
- |
- |
|
rs767029901
|
LP/P |
Congenital erythropoietic porphyria (CEP) [MIM:263700] |
|
rs769378741
|
LP/P |
Hepatoerythropoietic porphyria (HEP) [MIM:176100] |
|
rs770409384
|
- |
- |
|
rs77432735
|
- |
- |
|
rs777433697
|
LP/P |
Congenital erythropoietic porphyria (CEP) [MIM:263700] |
|
rs777579287
|
- |
- |
|
rs781627991
|
- |
- |
|
rs865805057
|
- |
- |
|
rs898824971
|
US |
Leukodystrophy, hypomyelinating, 15 (HLD15) [MIM:617951] |
|
rs903490384
|
- |
- |
|
rs982293378
|
LP/P |
Familial porphyria cutanea tarda (FPCT) [MIM:176100] |
hsa00900
|
Terpenoid backbone biosynthesis
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Porokeratosis 3, multiple types (POROK3) [MIM:175900] |
|
-
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
-
|
LP/P |
Muscular dystrophy, limb-girdle, autosomal recessive 28 (LGMDR28) [MIM:620375] |
|
-
|
Pathogenic |
Muscular dystrophy, limb-girdle, autosomal recessive 28 [MONDO:MONDO:0957270,MedGen:C5830518,OMIM:620375] |
|
.
|
- |
- |
|
rs104895297
|
LP/P |
Hyperimmunoglobulinemia D and periodic fever syndrome (HIDS) [MIM:260920] |
|
rs104895298
|
- |
- |
|
rs104895298
|
LP/P |
Hyperimmunoglobulinemia D and periodic fever syndrome (HIDS) [MIM:260920] |
|
rs104895298
|
Pathogenic |
Hyperimmunoglobulin D with periodic fever|not provided|Hyperimmunoglobulin D with periodic fever [MONDO:MONDO:0009849,MedGen:C0398691,OMIM:260920,Orphanet:343|MedGen:C3661900|MONDO:MONDO:0009849,MedGen:C0398691,OMIM:260920,Orphanet:343]; Mevalonic aciduria [MONDO:MONDO:0012481,MedGen:C1959626,OMIM:610377,Orphanet:29]; Porokeratosis 3, disseminated superficial actinic type [MONDO:MONDO:0008293,MedGen:C1867981,OMIM:175900] |
|
rs104895301
|
LP/P |
Porokeratosis 3, multiple types (POROK3) [MIM:175900] |
|
rs104895301
|
Pathogenic/Likely pathogenic |
Hyperimmunoglobulin D with periodic fever|Mevalonic aciduria|Porokeratosis 3, disseminated superficial actinic type|not provided|Porokeratosis 3, disseminated superficial actinic type [MONDO:MONDO:0009849,MedGen:C0398691,OMIM:260920,Orphanet:343|MONDO:MONDO:0012481,MedGen:C1959626,OMIM:610377,Orphanet:29|MONDO:MONDO:0008293,MedGen:C1867981,OMIM:175900|MedGen:C3661900|MONDO:MONDO:0008293,MedGen:C1867981,OMIM:175900]; Hyperimmunoglobulin D with periodic fever [MONDO:MONDO:0009849,MedGen:C0398691,OMIM:260920,Orphanet:343]; Mevalonic aciduria [MONDO:MONDO:0012481,MedGen:C1959626,OMIM:610377,Orphanet:29] |
|
rs104895314
|
LP/P |
Mevalonic aciduria (MEVA) [MIM:610377] |
|
rs104895317
|
LP/P |
Mevalonic aciduria (MEVA) [MIM:610377] |
|
rs104895317
|
Pathogenic |
Mevalonic aciduria|Hyperimmunoglobulin D with periodic fever|Hyperimmunoglobulin D with periodic fever [MONDO:MONDO:0012481,MedGen:C1959626,OMIM:610377,Orphanet:29|MONDO:MONDO:0009849,MedGen:C0398691,OMIM:260920,Orphanet:343|MONDO:MONDO:0009849,MedGen:C0398691,OMIM:260920,Orphanet:343]; Mevalonic aciduria [MONDO:MONDO:0012481,MedGen:C1959626,OMIM:610377,Orphanet:29]; Porokeratosis 3, disseminated superficial actinic type|not provided [MONDO:MONDO:0008293,MedGen:C1867981,OMIM:175900|MedGen:C3661900] |
|
rs104895332
|
Pathogenic/Likely pathogenic |
Hyperimmunoglobulin D with periodic fever|not provided|Hyperimmunoglobulin D with periodic fever [MONDO:MONDO:0009849,MedGen:C0398691,OMIM:260920,Orphanet:343|MedGen:C3661900|MONDO:MONDO:0009849,MedGen:C0398691,OMIM:260920,Orphanet:343]; Mevalonic aciduria [MONDO:MONDO:0012481,MedGen:C1959626,OMIM:610377,Orphanet:29]; Porokeratosis 3, disseminated superficial actinic type [MONDO:MONDO:0008293,MedGen:C1867981,OMIM:175900] |
|
rs104895336
|
LP/P |
Hyperimmunoglobulinemia D and periodic fever syndrome (HIDS) [MIM:260920] |
|
rs104895363
|
Likely pathogenic |
Hyperimmunoglobulin D with periodic fever|Hyperimmunoglobulin D with periodic fever [MONDO:MONDO:0009849,MedGen:C0398691,OMIM:260920,Orphanet:343|MONDO:MONDO:0009849,MedGen:C0398691,OMIM:260920,Orphanet:343]; Mevalonic aciduria [MONDO:MONDO:0012481,MedGen:C1959626,OMIM:610377,Orphanet:29]; Porokeratosis 3, disseminated superficial actinic type [MONDO:MONDO:0008293,MedGen:C1867981,OMIM:175900] |
|
rs11614976
|
LB/B |
- |
|
rs1178450762
|
- |
- |
|
rs120074141
|
LP/P |
3-ketothiolase deficiency (3KTD) [MIM:203750] |
|
rs1289541397
|
- |
- |
|
rs1333327173
|
- |
- |
|
rs137852640
|
Pathogenic |
3-hydroxy-3-methylglutaryl-CoA synthase deficiency [MONDO:MONDO:0011614,MedGen:C2751532,OMIM:605911,Orphanet:35701] |
|
rs1392154164
|
- |
- |
|
rs1437567292
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs145838142
|
Pathogenic/Likely pathogenic |
3-hydroxy-3-methylglutaryl-CoA synthase deficiency [MONDO:MONDO:0011614,MedGen:C2751532,OMIM:605911,Orphanet:35701] |
|
rs1553121073
|
US |
Developmental delay and seizures with or without movement abnormalities (DEDSM) [MIM:617836] |
|
rs1553122926
|
US |
Developmental delay and seizures with or without movement abnormalities (DEDSM) [MIM:617836] |
|
rs1557447255
|
US |
- |
|
rs1591374629
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1591374632
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1652875135
|
Likely pathogenic |
3-hydroxy-3-methylglutaryl-CoA synthase deficiency [MONDO:MONDO:0011614,MedGen:C2751532,OMIM:605911,Orphanet:35701] |
|
rs200513715
|
- |
- |
|
rs202015012
|
- |
- |
|
rs2134768688
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs2134768866
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs371834662
|
- |
- |
|
rs528393793
|
- |
- |
|
rs541517496
|
Pathogenic/Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs548466281
|
- |
- |
|
rs570650527
|
- |
- |
|
rs587688416
|
Likely pathogenic |
3-hydroxy-3-methylglutaryl-CoA synthase deficiency [MONDO:MONDO:0011614,MedGen:C2751532,OMIM:605911,Orphanet:35701] |
|
rs5908
|
LB/B |
- |
|
rs61729685
|
- |
- |
|
rs748303093
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of acetyl-CoA acetyltransferase [MedGen:C3661900|MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs748337518
|
- |
- |
|
rs750195919
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs752728103
|
- |
- |
|
rs753816946
|
- |
- |
|
rs757008752
|
- |
- |
|
rs758427037
|
Likely pathogenic |
Porokeratosis 3, disseminated superficial actinic type [MONDO:MONDO:0008293,MedGen:C1867981,OMIM:175900]; Mevalonic aciduria [MONDO:MONDO:0012481,MedGen:C1959626,OMIM:610377,Orphanet:29]; Hyperimmunoglobulin D with periodic fever [MONDO:MONDO:0009849,MedGen:C0398691,OMIM:260920,Orphanet:343] |
|
rs762211049
|
Likely pathogenic |
3-hydroxy-3-methylglutaryl-CoA synthase deficiency [MONDO:MONDO:0011614,MedGen:C2751532,OMIM:605911,Orphanet:35701] |
|
rs768448235
|
- |
- |
|
rs772874055
|
- |
- |
|
rs777774182
|
- |
- |
|
rs7957619
|
LB/B |
- |
|
rs863225241
|
LP/P |
Porokeratosis 9, multiple types (POROK9) [MIM:616631] |
|
rs886037858
|
LP/P |
Congenital disorder of glycosylation 1AA (CDG1AA) [MIM:617082] |
rn00901
|
Indole alkaloid biosynthesis
|
dbSNP |
Type |
Disease name |
|
-
|
Pathogenic/Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs137853207
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs137853209
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs137853210
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs1554411234
|
Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs1585237892
|
Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs2153545926
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs748439275
|
Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs771317809
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of aromatic-L-amino-acid decarboxylase [MedGen:C3661900|MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs935725316
|
Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs971183744
|
- |
- |
rn00902
|
Monoterpenoid biosynthesis
|
dbSNP |
Type |
Disease name |
|
.
|
- |
- |
|
rs1057910
|
- |
- |
|
rs117111102
|
- |
- |
|
rs118203757
|
- |
- |
|
rs12414460
|
- |
- |
|
rs1278639064
|
- |
- |
|
rs138112316
|
- |
- |
|
rs138142612
|
LB/B |
- |
|
rs139238143
|
- |
- |
|
rs140111676
|
- |
- |
|
rs141489852
|
- |
- |
|
rs141774245
|
- |
- |
|
rs148593307
|
- |
- |
|
rs1486164573
|
- |
- |
|
rs17884712
|
LB/B |
- |
|
rs184571563
|
- |
- |
|
rs192154563
|
LB/B |
- |
|
rs200183364
|
- |
- |
|
rs200346442
|
- |
- |
|
rs200965026
|
- |
- |
|
rs367826293
|
- |
- |
|
rs368758960
|
- |
- |
|
rs368767518
|
- |
- |
|
rs375805362
|
- |
- |
|
rs41286880
|
- |
- |
|
rs41286884
|
- |
- |
|
rs41291556
|
LB/B |
- |
|
rs543931018
|
- |
- |
|
rs56337013
|
LB/B |
- |
|
rs574462231
|
- |
- |
|
rs57505750
|
- |
- |
|
rs59734894
|
- |
- |
|
rs72552267
|
LB/B |
- |
|
rs72558189
|
- |
- |
|
rs72558191
|
Pathogenic |
Warfarin response [MONDO:MONDO:0007390,MedGen:C0750384,OMIM:122700] |
|
rs72558192
|
- |
- |
|
rs753270728
|
- |
- |
|
rs763625282
|
- |
- |
|
rs764137538
|
- |
- |
|
rs765456449
|
- |
- |
|
rs768830601
|
- |
- |
|
rs774997677
|
- |
- |
|
rs776908257
|
- |
- |
|
rs777237591
|
- |
- |
|
rs781583846
|
- |
- |
|
rs79500998
|
- |
- |
rn00903
|
Limonene degradation
|
dbSNP |
Type |
Disease name |
|
-
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
.
|
- |
- |
|
rs1057910
|
- |
- |
|
rs1170817007
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs117111102
|
- |
- |
|
rs118203757
|
- |
- |
|
rs121912707
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Seizure|Pyridoxine-dependent epilepsy caused by ALDH7A1 mutant [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|Human Phenotype Ontology:HP:0001250,Human Phenotype Ontology:HP:0001275,Human Phenotype Ontology:HP:0001303,Human Phenotype Ontology:HP:0002125,Human Phenotype Ontology:HP:0002182,Human Phenotype Ontology:HP:0002279,Human Phenotype Ontology:HP:0002306,Human Phenotype Ontology:HP:0002348,Human Phenotype Ontology:HP:0002391,Human Phenotype Ontology:HP:0002417,Human Phenotype Ontology:HP:0002430,Human Phenotype Ontology:HP:0002431,Human Phenotype Ontology:HP:0002432,Human Phenotype Ontology:HP:0002434,Human Phenotype Ontology:HP:0002437,Human Phenotype Ontology:HP:0002466,Human Phenotype Ontology:HP:0002479,Human Phenotype Ontology:HP:0002794,Human Phenotype Ontology:HP:0006997,Human Phenotype Ontology:HP:0010520,MedGen:C0036572|MONDO:MONDO:0020741,MedGen:CN293409] |
|
rs121912711
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs12414460
|
- |
- |
|
rs1278639064
|
- |
- |
|
rs1311982393
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs138112316
|
- |
- |
|
rs138142612
|
LB/B |
- |
|
rs139238143
|
- |
- |
|
rs140111676
|
- |
- |
|
rs141489852
|
- |
- |
|
rs141774245
|
- |
- |
|
rs148593307
|
- |
- |
|
rs1486164573
|
- |
- |
|
rs1564657013
|
LB/B |
- |
|
rs1750309299
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1750388096
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs17884712
|
LB/B |
- |
|
rs17885179
|
LB/B |
- |
|
rs184571563
|
- |
- |
|
rs192154563
|
LB/B |
- |
|
rs200183364
|
- |
- |
|
rs200346442
|
- |
- |
|
rs200965026
|
- |
- |
|
rs201948406
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Inborn genetic diseases [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs28399505
|
LB/B |
- |
|
rs367826293
|
- |
- |
|
rs368758960
|
- |
- |
|
rs368767518
|
- |
- |
|
rs372660425
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs375805362
|
- |
- |
|
rs41286880
|
- |
- |
|
rs41286884
|
- |
- |
|
rs41291556
|
LB/B |
- |
|
rs4986893
|
- |
- |
|
rs543931018
|
- |
- |
|
rs56337013
|
LB/B |
- |
|
rs574462231
|
- |
- |
|
rs57505750
|
- |
- |
|
rs59734894
|
- |
- |
|
rs72552267
|
LB/B |
- |
|
rs72558189
|
- |
- |
|
rs72558191
|
Pathogenic |
Warfarin response [MONDO:MONDO:0007390,MedGen:C0750384,OMIM:122700] |
|
rs72558192
|
- |
- |
|
rs753270728
|
- |
- |
|
rs761295869
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs763625282
|
- |
- |
|
rs764137538
|
- |
- |
|
rs765456449
|
- |
- |
|
rs768830601
|
- |
- |
|
rs773503933
|
- |
- |
|
rs774997677
|
- |
- |
|
rs776421832
|
- |
- |
|
rs776908257
|
- |
- |
|
rs777237591
|
- |
- |
|
rs781583846
|
- |
- |
|
rs79500998
|
- |
- |
|
rs796052271
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs864622558
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
rn00906
|
Carotenoid biosynthesis
|
dbSNP |
Type |
Disease name |
|
.
|
- |
- |
|
rs1274851618
|
- |
- |
|
rs1291406206
|
- |
- |
|
rs139230476
|
- |
- |
|
rs371623501
|
- |
- |
|
rs570650527
|
- |
- |
|
rs746780985
|
- |
- |
|
rs749461746
|
- |
- |
|
rs751451775
|
- |
- |
|
rs754529217
|
- |
- |
|
rs778046889
|
- |
- |
|
rs904011
|
- |
- |
rn00907
|
Pinene, camphor and geraniol degradation
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
.
|
- |
- |
|
rs104886492
|
US |
HSD10 mitochondrial disease (HSD10MD) [MIM:300438] |
|
rs1202368985
|
- |
- |
|
rs137853096
|
LP/P |
D-bifunctional protein deficiency (DBPD) [MIM:261515] |
|
rs137853101
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs137853102
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs1392361503
|
Pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs1561442127
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs371834662
|
- |
- |
|
rs550705310
|
- |
- |
|
rs577954688
|
- |
- |
|
rs74428123
|
- |
- |
|
rs779135938
|
Likely pathogenic |
Deficiency of 3-hydroxyacyl-CoA dehydrogenase|Hyperinsulinemic hypoglycemia|Hyperinsulinemic hypoglycemia, familial, 4 [MONDO:MONDO:0017715,MedGen:C1291230,OMIM:231530,Orphanet:309127,Orphanet:71212|Human Phenotype Ontology:HP:0000825,MONDO:MONDO:0005803,MedGen:C1864903,OMIM:PS256450,Orphanet:443095|MONDO:MONDO:0012382,MedGen:C1864948,OMIM:609975,Orphanet:71212] |
|
rs886037927
|
Likely pathogenic |
HSD10 mitochondrial disease [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295] |
rn00909
|
Sesquiterpenoid and triterpenoid biosynthesis
|
dbSNP |
Type |
Disease name |
|
.
|
- |
- |
|
rs1274851618
|
- |
- |
|
rs1291406206
|
- |
- |
|
rs138781417
|
- |
- |
|
rs139230476
|
- |
- |
|
rs1810791017
|
Likely pathogenic |
Squalene synthase deficiency [MONDO:MONDO:0032566,MedGen:C4748427,OMIM:618156] |
|
rs200217031
|
- |
- |
|
rs201022112
|
- |
- |
|
rs371623501
|
- |
- |
|
rs376669118
|
- |
- |
|
rs4731
|
LB/B |
- |
|
rs542597307
|
- |
- |
|
rs570650527
|
- |
- |
|
rs746780985
|
- |
- |
|
rs749461746
|
- |
- |
|
rs751451775
|
- |
- |
|
rs754529217
|
- |
- |
|
rs764164796
|
- |
- |
|
rs778046889
|
- |
- |
|
rs904011
|
- |
- |
hsa00910
|
Nitrogen metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
-
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
-
|
LP/P |
Osteopetrosis, autosomal recessive 3 (OPTB3) [MIM:259730] |
|
-
|
Likely pathogenic |
Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
.
|
- |
- |
|
rs1048119191
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1172971002
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I|Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147|MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
rs118203933
|
- |
- |
|
rs118203933
|
LP/P |
Osteopetrosis, autosomal recessive 3 (OPTB3) [MIM:259730] |
|
rs1202306773
|
- |
- |
|
rs1202306773
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs121909732
|
Pathogenic |
Hyperinsulinism-hyperammonemia syndrome [MONDO:MONDO:0011717,MedGen:C1847555,OMIM:606762,Orphanet:35878] |
|
rs121909734
|
Pathogenic |
Hyperinsulinism-hyperammonemia syndrome [MONDO:MONDO:0011717,MedGen:C1847555,OMIM:606762,Orphanet:35878] |
|
rs121912592
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs121912592
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I|Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147|MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
rs121912596
|
- |
- |
|
rs121912596
|
Pathogenic |
Congenital hyperammonemia, type I|Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147|MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
rs1242028775
|
- |
- |
|
rs1242028775
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1245368879
|
Pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1275599086
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1280211937
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1304160279
|
LP/P |
Osteopetrosis, autosomal recessive 3 (OPTB3) [MIM:259730] |
|
rs1305147387
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1319489001
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1326334493
|
- |
- |
|
rs1327048960
|
Pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1337182136
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1392559810
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1392934477
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1414143303
|
- |
- |
|
rs1414143303
|
Pathogenic |
Congenital hyperammonemia, type I|Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147|MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147]; Pulmonary hypertension, neonatal, susceptibility to|Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371|MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
rs1471393474
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs149518280
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1553509297
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1553511785
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1553512642
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1553513429
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1553516442
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1553516443
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1553518389
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1554709677
|
Pathogenic |
Osteopetrosis with renal tubular acidosis [MONDO:MONDO:0009818,MedGen:C0345407,OMIM:259730,Orphanet:2785] |
|
rs1559142152
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1574586310
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1574646079
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1698686495
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1698754274
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1698933356
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1700715255
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1700881929
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1701171267
|
Pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1701172643
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs202107577
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I|Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147|MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
rs2105908864
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I|Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147|MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147]; Pulmonary hypertension, neonatal, susceptibility to|Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371|MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
rs2105922857
|
Pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs2105942900
|
Pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs2133777379
|
Pathogenic |
Hyperinsulinism-hyperammonemia syndrome [MONDO:MONDO:0011717,MedGen:C1847555,OMIM:606762,Orphanet:35878] |
|
rs28940283
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs369061090
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs373116402
|
- |
- |
|
rs373705613
|
- |
- |
|
rs539558180
|
- |
- |
|
rs74744080
|
- |
- |
|
rs749093544
|
- |
- |
|
rs750670270
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs752339705
|
- |
- |
|
rs752339705
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs756337473
|
- |
- |
|
rs756337473
|
Pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs757205958
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs759201450
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs765196603
|
- |
- |
|
rs767377977
|
- |
- |
|
rs769085115
|
- |
- |
|
rs777088645
|
- |
- |
|
rs777233486
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs779259590
|
- |
- |
|
rs80358214
|
LP/P |
Congenital systemic glutamine deficiency (CSGD) [MIM:610015] |
|
rs933813349
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs933813349
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I|Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147|MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
hsa00920
|
Sulfur metabolism
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
-
|
Likely pathogenic |
Classic homocystinuria [MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394] |
|
-
|
Likely pathogenic |
Ethylmalonic encephalopathy [MONDO:MONDO:0011229,MedGen:C1865349,OMIM:602473,Orphanet:51188] |
|
.
|
- |
- |
|
rs121908951
|
LP/P |
Brachyolmia type 4 with mild epiphyseal and metaphyseal changes (BCYM4) [MIM:612847] |
|
rs121964963
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs121964966
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs121964968
|
- |
- |
|
rs121964968
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs121964970
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs1234354755
|
Pathogenic |
Classic homocystinuria|HYPERHOMOCYSTEINEMIA, THROMBOTIC, CBS-RELATED [MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394|MedGen:C3150344] |
|
rs1268640442
|
LP/P |
Ethylmalonic encephalopathy (EE) [MIM:602473] |
|
rs1284200516
|
LP/P |
Ethylmalonic encephalopathy (EE) [MIM:602473] |
|
rs1347651454
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs1347651454
|
Pathogenic |
Homocystinuria|Familial thoracic aortic aneurysm and aortic dissection|HYPERHOMOCYSTEINEMIA, THROMBOTIC, CBS-RELATED|See cases|Classic homocystinuria [Human Phenotype Ontology:HP:0002156,MONDO:MONDO:0004737,MedGen:C0019880|MONDO:MONDO:0019625,MedGen:C4707243,OMIM:PS607086,Orphanet:91387|MedGen:C3150344||MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394] |
|
rs1357895717
|
- |
- |
|
rs139166171
|
- |
- |
|
rs139190720
|
- |
- |
|
rs140928408
|
- |
- |
|
rs145370575
|
- |
- |
|
rs1454273149
|
- |
- |
|
rs147044875
|
- |
- |
|
rs148563375
|
- |
- |
|
rs1555762722
|
Likely pathogenic |
Ethylmalonic encephalopathy|Abnormality of the nervous system [MONDO:MONDO:0011229,MedGen:C1865349,OMIM:602473,Orphanet:51188|Human Phenotype Ontology:HP:0000707,Human Phenotype Ontology:HP:0001333,Human Phenotype Ontology:HP:0006987,MONDO:MONDO:0002320,MedGen:C0497552] |
|
rs1555765564
|
LP/P |
Ethylmalonic encephalopathy (EE) [MIM:602473] |
|
rs17856552
|
- |
- |
|
rs182983506
|
LP/P |
Ethylmalonic encephalopathy (EE) [MIM:602473] |
|
rs183618664
|
- |
- |
|
rs1982601982
|
Likely pathogenic |
Classic homocystinuria [MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394] |
|
rs199532729
|
- |
- |
|
rs2146018812
|
Pathogenic |
Ethylmalonic encephalopathy [MONDO:MONDO:0011229,MedGen:C1865349,OMIM:602473,Orphanet:51188] |
|
rs267605525
|
Likely pathogenic |
Ethylmalonic encephalopathy [MONDO:MONDO:0011229,MedGen:C1865349,OMIM:602473,Orphanet:51188] |
|
rs28940289
|
LP/P |
Ethylmalonic encephalopathy (EE) [MIM:602473] |
|
rs28941785
|
LP/P |
Cystathioninuria (CSTNU) [MIM:219500] |
|
rs28941786
|
LP/P |
Cystathioninuria (CSTNU) [MIM:219500] |
|
rs369323241
|
- |
- |
|
rs373782713
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs373782713
|
Pathogenic |
Classic homocystinuria|Homocystinuria|not provided|HYPERHOMOCYSTEINEMIA, THROMBOTIC, CBS-RELATED|Familial thoracic aortic aneurysm and aortic dissection [MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394|Human Phenotype Ontology:HP:0002156,MONDO:MONDO:0004737,MedGen:C0019880|MedGen:C3661900|MedGen:C3150344|MONDO:MONDO:0019625,MedGen:C4707243,OMIM:PS607086,Orphanet:91387] |
|
rs374816177
|
- |
- |
|
rs564873625
|
- |
- |
|
rs61755740
|
- |
- |
|
rs745656120
|
LP/P |
Ethylmalonic encephalopathy (EE) [MIM:602473] |
|
rs749803238
|
- |
- |
|
rs749803238
|
Pathogenic/Likely pathogenic |
Ethylmalonic encephalopathy|not provided [MONDO:MONDO:0011229,MedGen:C1865349,OMIM:602473,Orphanet:51188|MedGen:C3661900] |
|
rs751816050
|
- |
- |
|
rs755106884
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs755952006
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs755952006
|
Pathogenic/Likely pathogenic |
Classic homocystinuria|Homocystinuria|HYPERHOMOCYSTEINEMIA, THROMBOTIC, CBS-RELATED|Familial thoracic aortic aneurysm and aortic dissection|not provided [MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394|Human Phenotype Ontology:HP:0002156,MONDO:MONDO:0004737,MedGen:C0019880|MedGen:C3150344|MONDO:MONDO:0019625,MedGen:C4707243,OMIM:PS607086,Orphanet:91387|MedGen:C3661900] |
|
rs756235299
|
Likely pathogenic |
Ethylmalonic encephalopathy|not provided [MONDO:MONDO:0011229,MedGen:C1865349,OMIM:602473,Orphanet:51188|MedGen:C3661900] |
|
rs758236584
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs762589841
|
- |
- |
|
rs763799125
|
- |
- |
|
rs763799125
|
LP/P |
Ethylmalonic encephalopathy (EE) [MIM:602473] |
|
rs767651793
|
Pathogenic |
Karyomegalic interstitial nephritis [MONDO:MONDO:0013898,MedGen:C3553774,OMIM:614817,Orphanet:401996] |
|
rs769879789
|
- |
- |
|
rs775097749
|
- |
- |
|
rs775272253
|
- |
- |
|
rs778874532
|
- |
- |
|
rs781585781
|
- |
- |
rn00930
|
Caprolactam degradation
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
.
|
- |
- |
|
rs104886492
|
US |
HSD10 mitochondrial disease (HSD10MD) [MIM:300438] |
|
rs1202368985
|
- |
- |
|
rs1348837644
|
- |
- |
|
rs137853096
|
LP/P |
D-bifunctional protein deficiency (DBPD) [MIM:261515] |
|
rs137853101
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs137853102
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs138887023
|
- |
- |
|
rs1392361503
|
Pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs146556418
|
- |
- |
|
rs150526754
|
- |
- |
|
rs1561442127
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs200000745
|
- |
- |
|
rs201321507
|
- |
- |
|
rs2458502
|
- |
- |
|
rs550705310
|
- |
- |
|
rs573040804
|
- |
- |
|
rs577954688
|
- |
- |
|
rs74428123
|
- |
- |
|
rs779135938
|
Likely pathogenic |
Deficiency of 3-hydroxyacyl-CoA dehydrogenase|Hyperinsulinemic hypoglycemia|Hyperinsulinemic hypoglycemia, familial, 4 [MONDO:MONDO:0017715,MedGen:C1291230,OMIM:231530,Orphanet:309127,Orphanet:71212|Human Phenotype Ontology:HP:0000825,MONDO:MONDO:0005803,MedGen:C1864903,OMIM:PS256450,Orphanet:443095|MONDO:MONDO:0012382,MedGen:C1864948,OMIM:609975,Orphanet:71212] |
|
rs886037927
|
Likely pathogenic |
HSD10 mitochondrial disease [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295] |
rn00940
|
Phenylpropanoid biosynthesis
|
dbSNP |
Type |
Disease name |
|
rs763363576
|
- |
- |
rn00950
|
Isoquinoline alkaloid biosynthesis
|
dbSNP |
Type |
Disease name |
|
-
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
-
|
LP/P |
Segawa syndrome autosomal recessive (ARSEGS) [MIM:605407] |
|
-
|
Likely pathogenic |
Autosomal recessive DOPA responsive dystonia [MONDO:MONDO:0011551,MedGen:C2673535,OMIM:605407,Orphanet:101150] |
|
-
|
Pathogenic/Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
.
|
- |
- |
|
rs1057520384
|
LP/P |
Segawa syndrome autosomal recessive (ARSEGS) [MIM:605407] |
|
rs118203916
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
rs121917765
|
LP/P |
Segawa syndrome autosomal recessive (ARSEGS) [MIM:605407] |
|
rs1260079066
|
- |
- |
|
rs1260079066
|
Pathogenic |
Autosomal recessive DOPA responsive dystonia [MONDO:MONDO:0011551,MedGen:C2673535,OMIM:605407,Orphanet:101150] |
|
rs137853207
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs137853209
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs137853210
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs1428589694
|
LP/P |
Segawa syndrome autosomal recessive (ARSEGS) [MIM:605407] |
|
rs1490005005
|
- |
- |
|
rs1554411234
|
Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs1554922441
|
Likely pathogenic |
Autosomal recessive DOPA responsive dystonia [MONDO:MONDO:0011551,MedGen:C2673535,OMIM:605407,Orphanet:101150] |
|
rs1585237892
|
Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs181309650
|
- |
- |
|
rs201951824
|
Pathogenic/Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase|See cases|not provided [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708||MedGen:C3661900] |
|
rs2044180572
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
rs761817519
|
Pathogenic/Likely pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
rs768158086
|
- |
- |
|
rs771317809
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of aromatic-L-amino-acid decarboxylase [MedGen:C3661900|MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs935725316
|
Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs971183744
|
- |
- |
rn00960
|
Tropane, piperidine and pyridine alkaloid biosynthesis
|
dbSNP |
Type |
Disease name |
|
-
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
.
|
- |
- |
|
rs118203916
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
rs121912777
|
- |
- |
|
rs121912777
|
Pathogenic |
DRUG METABOLISM, ALTERED, CES1-RELATED [MedGen:C4748035,OMIM:618057] |
|
rs181309650
|
- |
- |
|
rs200707504
|
- |
- |
|
rs2044180572
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
rs35097308
|
LB/B |
- |
|
rs629682
|
- |
- |
|
rs71647871
|
LB/B |
- |
|
rs750433997
|
- |
- |
|
rs768158086
|
- |
- |
|
rs778421449
|
- |
- |
rn00965
|
Betalain biosynthesis
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
.
|
- |
- |
|
rs13306279
|
- |
- |
|
rs137853207
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs137853209
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs137853210
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs1554411234
|
Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs1585237892
|
Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs199710929
|
- |
- |
|
rs201225516
|
- |
- |
|
rs201951824
|
Pathogenic/Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase|See cases|not provided [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708||MedGen:C3661900] |
|
rs373611092
|
- |
- |
|
rs4986871
|
LB/B |
- |
|
rs575273220
|
- |
- |
|
rs771317809
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of aromatic-L-amino-acid decarboxylase [MedGen:C3661900|MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs935725316
|
Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs971183744
|
- |
- |
rn00966
|
Glucosinolate biosynthesis
|
dbSNP |
Type |
Disease name |
|
rs1234657138
|
- |
- |
|
rs1467808566
|
- |
- |
|
rs749866079
|
LP/P |
Hypervalinemia and hyperleucine-isoleucinemia (HVLI) [MIM:618850] |
|
rs765582096
|
- |
- |
|
rs780634137
|
- |
- |
hsa00970
|
Aminoacyl-tRNA biosynthesis
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Charcot-Marie-Tooth disease, axonal, 2D (CMT2D) [MIM:601472] |
|
-
|
Pathogenic/Likely pathogenic |
not provided|Inborn genetic diseases|Leukoencephalopathy with brain stem and spinal cord involvement-high lactate syndrome [MedGen:C3661900|MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0012622,MedGen:C1970180,OMIM:611105,Orphanet:137898] |
|
-
|
Pathogenic |
Combined oxidative phosphorylation defect type 14 [MONDO:MONDO:0013986,MedGen:C4755312,OMIM:614946,Orphanet:319519] |
|
-
|
Likely pathogenic |
Autosomal dominant Charcot-Marie-Tooth disease type 2W [MONDO:MONDO:0014711,MedGen:C5567486,OMIM:616625,Orphanet:488333] |
|
-
|
LP/P |
Neurodevelopmental disorder with microcephaly, ataxia, and seizures (NEDMAS) [MIM:617709] |
|
-
|
Pathogenic |
Neurodevelopmental disorder with microcephaly, ataxia, and seizures [MONDO:MONDO:0060577,MedGen:C4540188,OMIM:617709] |
|
-
|
LP/P |
Leukoencephalopathy, progressive, infantile-onset, with or without deafness (LEPID) [MIM:619147] |
|
-
|
US |
Neurodevelopmental disorder with microcephaly and speech delay, with or without brain abnormalities (NEDMSBA) [MIM:620317] |
|
.
|
- |
- |
|
rs11552864
|
LB/B |
- |
|
rs11552864
|
Likely pathogenic |
Parkinsonism-dystonia 3, childhood-onset [MONDO:MONDO:0030676,MedGen:C5676913,OMIM:619738] |
|
rs1165006833
|
- |
- |
|
rs1205037339
|
- |
- |
|
rs12144752
|
LB/B |
- |
|
rs121908833
|
LP/P |
Charcot-Marie-Tooth disease, dominant intermediate C (CMTDIC) [MIM:608323] |
|
rs121908833
|
Pathogenic |
Charcot-Marie-Tooth disease dominant intermediate C|Charcot-Marie-Tooth disease [MONDO:MONDO:0012012,MedGen:C1842237,OMIM:608323,Orphanet:100045|MONDO:MONDO:0015626,MedGen:C0007959,OMIM:PS118220,Orphanet:166] |
|
rs1239341211
|
US |
Charcot-Marie-Tooth disease, axonal, 2W (CMT2W) [MIM:616625] |
|
rs1288116010
|
LP/P |
Leukodystrophy, hypomyelinating, 15 (HLD15) [MIM:617951] |
|
rs1309003036
|
- |
- |
|
rs1309003036
|
Pathogenic/Likely pathogenic |
not provided|Pontocerebellar hypoplasia type 2D [MedGen:C3661900|MONDO:MONDO:0013438,MedGen:C3151140,OMIM:613811,Orphanet:2524] |
|
rs1352847053
|
- |
- |
|
rs1368396069
|
- |
- |
|
rs137852646
|
LP/P |
Neuronopathy, distal hereditary motor, 5A (HMN5A) [MIM:600794] |
|
rs137852646
|
Pathogenic |
Neuronopathy, distal hereditary motor, type 5A|Distal spinal muscular atrophy|Charcot-Marie-Tooth disease type 2D|Charcot-Marie-Tooth disease type 2 [MONDO:MONDO:0015353,MedGen:C5399969,OMIM:600794,Orphanet:139536|MONDO:MONDO:0018894,MedGen:C0393541,Orphanet:53739|MONDO:MONDO:0011091,MedGen:C1832274,OMIM:601472,Orphanet:99938|MONDO:MONDO:0018993,MedGen:C0270914,Orphanet:64746] |
|
rs137852648
|
LP/P |
Charcot-Marie-Tooth disease, axonal, 2D (CMT2D) [MIM:601472] |
|
rs1391219026
|
- |
- |
|
rs139914390
|
LB/B |
- |
|
rs143473232
|
LP/P |
Charcot-Marie-Tooth disease, axonal, 2W (CMT2W) [MIM:616625] |
|
rs144322728
|
US |
Charcot-Marie-Tooth disease, axonal, 2W (CMT2W) [MIM:616625] |
|
rs146988468
|
Pathogenic/Likely pathogenic |
Combined oxidative phosphorylation defect type 14|not provided [MONDO:MONDO:0013986,MedGen:C4755312,OMIM:614946,Orphanet:319519|MedGen:C3661900] |
|
rs1474000585
|
US |
Leukodystrophy, hypomyelinating, 15 (HLD15) [MIM:617951] |
|
rs149605576
|
Likely pathogenic |
Combined oxidative phosphorylation defect type 14 [MONDO:MONDO:0013986,MedGen:C4755312,OMIM:614946,Orphanet:319519] |
|
rs1553178399
|
Pathogenic |
Cerebral arteriovenous malformation [Human Phenotype Ontology:HP:0002408,MONDO:MONDO:0007154,MedGen:C0917804,OMIM:108010,Orphanet:46724] |
|
rs1553241795
|
LP/P |
Neurodevelopmental disorder, mitochondrial, with abnormal movements and lactic acidosis, with or without seizures (NEMMLAS) [MIM:617710] |
|
rs1554106881
|
LP/P |
Charcot-Marie-Tooth disease, axonal, 2W (CMT2W) [MIM:616625] |
|
rs1554107200
|
Likely pathogenic |
Autosomal dominant Charcot-Marie-Tooth disease type 2W [MONDO:MONDO:0014711,MedGen:C5567486,OMIM:616625,Orphanet:488333] |
|
rs1554337369
|
LP/P |
Neuronopathy, distal hereditary motor, 5A (HMN5A) [MIM:600794] |
|
rs1554337369
|
Pathogenic |
Charcot-Marie-Tooth disease|Charcot-Marie-Tooth disease type 2|Neuronopathy, distal hereditary motor, type 5 [MONDO:MONDO:0015626,MedGen:C0007959,OMIM:PS118220,Orphanet:166|MONDO:MONDO:0018993,MedGen:C0270914,Orphanet:64746|MONDO:MONDO:0100350,MedGen:C1833308,Orphanet:139536] |
|
rs1561990552
|
Likely pathogenic |
Combined oxidative phosphorylation defect type 14 [MONDO:MONDO:0013986,MedGen:C4755312,OMIM:614946,Orphanet:319519] |
|
rs1571323203
|
Likely pathogenic |
Neurodevelopmental disorder, mitochondrial, with abnormal movements and lactic acidosis, with or without seizures|Parkinsonism-dystonia 3, childhood-onset [MONDO:MONDO:0060578,MedGen:C4540192,OMIM:617710,Orphanet:572798|MONDO:MONDO:0030676,MedGen:C5676913,OMIM:619738] |
|
rs1571323203
|
LP/P |
Parkinsonism-dystonia 3, childhood-onset (PKDYS3) [MIM:619738] |
|
rs1584026191
|
Likely pathogenic |
Neuronopathy, distal hereditary motor, type 5A [MONDO:MONDO:0015353,MedGen:C5399969,OMIM:600794,Orphanet:139536] |
|
rs1647600390
|
LP/P |
Parkinsonism-dystonia 3, childhood-onset (PKDYS3) [MIM:619738] |
|
rs1971301248
|
US |
Rajab interstitial lung disease with brain calcifications 2 (RILDBC2) [MIM:619013] |
|
rs201555303
|
LP/P |
Interstitial lung and liver disease (ILLD) [MIM:615486] |
|
rs2101095108
|
Likely pathogenic |
Neurodevelopmental disorder, mitochondrial, with abnormal movements and lactic acidosis, with or without seizures [MONDO:MONDO:0060578,MedGen:C4540192,OMIM:617710,Orphanet:572798] |
|
rs2107111037
|
Pathogenic |
Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [MONDO:MONDO:0014335,MedGen:C4014239,OMIM:615760,Orphanet:404437] |
|
rs2128134025
|
Pathogenic |
Charcot-Marie-Tooth disease type 2D [MONDO:MONDO:0011091,MedGen:C1832274,OMIM:601472,Orphanet:99938] |
|
rs2128134030
|
Pathogenic/Likely pathogenic |
not provided|Neuronopathy, distal hereditary motor, type 5A [MedGen:C3661900|MONDO:MONDO:0015353,MedGen:C5399969,OMIM:600794,Orphanet:139536] |
|
rs2128600
|
LB/B |
- |
|
rs375272364
|
Pathogenic |
Rajab interstitial lung disease with brain calcifications 2 [MONDO:MONDO:0100220,MedGen:C5436603,OMIM:619013] |
|
rs5030752
|
LB/B |
- |
|
rs536175170
|
US |
Charcot-Marie-Tooth disease, axonal, 2W (CMT2W) [MIM:616625] |
|
rs550778711
|
- |
- |
|
rs745543661
|
Likely pathogenic |
Neurodevelopmental disorder, mitochondrial, with abnormal movements and lactic acidosis, with or without seizures [MONDO:MONDO:0060578,MedGen:C4540192,OMIM:617710,Orphanet:572798] |
|
rs747624673
|
- |
- |
|
rs760419506
|
- |
- |
|
rs765537459
|
Pathogenic/Likely pathogenic |
Leukodystrophy, hypomyelinating, 15|not provided [MONDO:MONDO:0054782,MedGen:C4693733,OMIM:617951|MedGen:C3661900] |
|
rs766501807
|
US |
Neurodevelopmental disorder, mitochondrial, with abnormal movements and lactic acidosis, with or without seizures (NEMMLAS) [MIM:617710] |
|
rs768349236
|
- |
- |
|
rs769635375
|
- |
- |
|
rs769780656
|
- |
- |
|
rs770522582
|
US |
Leukoencephalopathy, progressive, infantile-onset, with or without deafness (LEPID) [MIM:619147] |
|
rs770525873
|
LP/P |
Leukoencephalopathy with brainstem and spinal cord involvement and lactate elevation (LBSL) [MIM:611105] |
|
rs772489337
|
LP/P |
Leukoencephalopathy with brainstem and spinal cord involvement and lactate elevation (LBSL) [MIM:611105] |
|
rs775832079
|
- |
- |
|
rs779551463
|
- |
- |
|
rs863224873
|
Likely pathogenic |
Neuronopathy, distal hereditary motor, type 5A [MONDO:MONDO:0015353,MedGen:C5399969,OMIM:600794,Orphanet:139536]; Charcot-Marie-Tooth disease type 2D [MONDO:MONDO:0011091,MedGen:C1832274,OMIM:601472,Orphanet:99938] |
|
rs863225123
|
LP/P |
Charcot-Marie-Tooth disease, axonal, 2W (CMT2W) [MIM:616625] |
|
rs891557080
|
- |
- |
|
rs898824971
|
US |
Leukodystrophy, hypomyelinating, 15 (HLD15) [MIM:617951] |
|
rs912133959
|
LP/P |
Neurodevelopmental disorder, mitochondrial, with abnormal movements and lactic acidosis, with or without seizures (NEMMLAS) [MIM:617710] |
|
rs933237458
|
- |
- |
|
rs957599864
|
- |
- |
|
rs957599864
|
Pathogenic |
Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [MONDO:MONDO:0014335,MedGen:C4014239,OMIM:615760,Orphanet:404437] |
hsa00980
|
Metabolism of xenobiotics by cytochrome P450
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
-
|
LP/P |
Microphthalmia, isolated, 8 (MCOP8) [MIM:615113] |
|
-
|
Likely pathogenic |
Isolated microphthalmia 8 [MONDO:MONDO:0014050,MedGen:C3554524,OMIM:615113,Orphanet:2542] |
|
-
|
Pathogenic |
Primary congenital glaucoma|Anterior segment dysgenesis 6|Congenital glaucoma [Human Phenotype Ontology:HP:0008007,MONDO:MONDO:0000365,MedGen:C1533041|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315|MONDO:MONDO:0020366,MedGen:C0020302] |
|
-
|
Likely pathogenic |
Anterior segment dysgenesis [Human Phenotype Ontology:HP:0007696,Human Phenotype Ontology:HP:0007699,Human Phenotype Ontology:HP:0007700,Human Phenotype Ontology:HP:0008040,MONDO:MONDO:0019503,MedGen:C1862839,OMIM:PS107250,Orphanet:88632] |
|
.
|
- |
- |
|
rs1041969
|
LB/B |
- |
|
rs10423255
|
- |
- |
|
rs104893628
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs1052661
|
LB/B |
- |
|
rs1056836
|
LB/B |
- |
|
rs1056892
|
LB/B |
- |
|
rs1057910
|
- |
- |
|
rs1126673
|
- |
- |
|
rs113351006
|
- |
- |
|
rs11509436
|
LB/B |
- |
|
rs115638369
|
- |
- |
|
rs11666105
|
- |
- |
|
rs117111102
|
- |
- |
|
rs117244518
|
- |
- |
|
rs118203757
|
- |
- |
|
rs1200476864
|
- |
- |
|
rs1207708075
|
- |
- |
|
rs1223667143
|
- |
- |
|
rs1229984
|
LB/B |
- |
|
rs12414460
|
- |
- |
|
rs12460590
|
- |
- |
|
rs1256974790
|
- |
- |
|
rs1257727040
|
- |
- |
|
rs12721627
|
LB/B |
- |
|
rs12721629
|
LB/B |
- |
|
rs1278639064
|
- |
- |
|
rs1292504288
|
- |
- |
|
rs1309748501
|
- |
- |
|
rs13222
|
LP/P |
46,XY sex reversal 8 (SRXY8) [MIM:614279] |
|
rs1326916949
|
- |
- |
|
rs138014515
|
- |
- |
|
rs138105638
|
- |
- |
|
rs138112316
|
- |
- |
|
rs138142612
|
LB/B |
- |
|
rs138675307
|
- |
- |
|
rs139238143
|
- |
- |
|
rs139250712
|
- |
- |
|
rs140111676
|
- |
- |
|
rs140112768
|
- |
- |
|
rs1412501773
|
- |
- |
|
rs141489852
|
- |
- |
|
rs141774245
|
- |
- |
|
rs142248185
|
- |
- |
|
rs144797839
|
- |
- |
|
rs145669559
|
- |
- |
|
rs145774441
|
- |
- |
|
rs146938082
|
- |
- |
|
rs1471862905
|
- |
- |
|
rs147570552
|
- |
- |
|
rs148044792
|
LB/B |
- |
|
rs148593307
|
- |
- |
|
rs1486164573
|
- |
- |
|
rs148693084
|
- |
- |
|
rs149081683
|
- |
- |
|
rs149295644
|
- |
- |
|
rs149408684
|
- |
- |
|
rs150890087
|
- |
- |
|
rs1558201263
|
- |
- |
|
rs1558603396
|
Likely pathogenic |
Glaucoma 3A|Anterior segment dysgenesis 6 [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
rs1564317029
|
- |
- |
|
rs1695
|
LB/B |
- |
|
rs17884712
|
LB/B |
- |
|
rs1815413655
|
LP/P |
Vitamin D-dependent rickets 3 (VDDR3) [MIM:619073] |
|
rs184571563
|
- |
- |
|
rs190776413
|
- |
- |
|
rs192154563
|
LB/B |
- |
|
rs199545200
|
- |
- |
|
rs199558694
|
- |
- |
|
rs200183364
|
- |
- |
|
rs200346442
|
- |
- |
|
rs200635241
|
- |
- |
|
rs200908381
|
- |
- |
|
rs200965026
|
- |
- |
|
rs201286895
|
- |
- |
|
rs201934016
|
- |
- |
|
rs202002774
|
- |
- |
|
rs2066702
|
LB/B |
- |
|
rs2125316074
|
Pathogenic/Likely pathogenic |
Glaucoma 3A|Primary congenital glaucoma [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|Human Phenotype Ontology:HP:0008007,MONDO:MONDO:0000365,MedGen:C1533041] |
|
rs2261144
|
- |
- |
|
rs2270941
|
- |
- |
|
rs2397118
|
- |
- |
|
rs2835285
|
LB/B |
- |
|
rs28371759
|
LB/B |
- |
|
rs28399454
|
- |
- |
|
rs28730628
|
LB/B |
- |
|
rs28936701
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs28936701
|
Pathogenic |
Glaucoma 3A|not provided|Congenital glaucoma|Primary congenital glaucoma|Anterior segment dysgenesis 6 [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MedGen:C3661900|MONDO:MONDO:0020366,MedGen:C0020302|Human Phenotype Ontology:HP:0008007,MONDO:MONDO:0000365,MedGen:C1533041|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
rs3208363
|
LB/B |
- |
|
rs35385902
|
LB/B |
- |
|
rs367826293
|
- |
- |
|
rs367861880
|
- |
- |
|
rs368758960
|
- |
- |
|
rs368767518
|
- |
- |
|
rs369106912
|
- |
- |
|
rs370245703
|
- |
- |
|
rs370312954
|
- |
- |
|
rs371911407
|
- |
- |
|
rs372231982
|
- |
- |
|
rs372995407
|
- |
- |
|
rs373232513
|
- |
- |
|
rs374926260
|
- |
- |
|
rs375051929
|
- |
- |
|
rs375805362
|
- |
- |
|
rs3765148
|
- |
- |
|
rs376817657
|
- |
- |
|
rs377699817
|
- |
- |
|
rs41286880
|
- |
- |
|
rs41286884
|
- |
- |
|
rs41291556
|
LB/B |
- |
|
rs449856
|
LB/B |
- |
|
rs45529437
|
LB/B |
- |
|
rs4986910
|
LB/B |
- |
|
rs4987161
|
LB/B |
- |
|
rs5031017
|
- |
- |
|
rs529769268
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs529769268
|
Likely pathogenic |
Primary congenital glaucoma|Glaucoma 3, primary infantile, B [Human Phenotype Ontology:HP:0008007,MONDO:MONDO:0000365,MedGen:C1533041|MONDO:MONDO:0010968,MedGen:C1832977,OMIM:600975,Orphanet:98976]; Anterior segment dysgenesis 6 [MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315]; Glaucoma 3A|Anterior segment dysgenesis 6 [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
rs543931018
|
- |
- |
|
rs545294956
|
- |
- |
|
rs547918064
|
- |
- |
|
rs547918064
|
Likely pathogenic |
not provided|Isolated microphthalmia 8 [MedGen:C3661900|MONDO:MONDO:0014050,MedGen:C3554524,OMIM:615113,Orphanet:2542] |
|
rs55785340
|
LB/B |
- |
|
rs55901263
|
LB/B |
- |
|
rs55951658
|
LB/B |
- |
|
rs56175199
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs56175199
|
Pathogenic/Likely pathogenic |
not provided|Anterior segment dysgenesis 6|Congenital glaucoma [MedGen:C3661900|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315|MONDO:MONDO:0020366,MedGen:C0020302] |
|
rs56251804
|
- |
- |
|
rs56324128
|
LB/B |
- |
|
rs56337013
|
LB/B |
- |
|
rs56339482
|
- |
- |
|
rs573739126
|
- |
- |
|
rs574462231
|
- |
- |
|
rs57505750
|
- |
- |
|
rs57865060
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs58798281
|
- |
- |
|
rs59472972
|
- |
- |
|
rs59472972
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs59734894
|
- |
- |
|
rs67784355
|
LB/B |
- |
|
rs72549378
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs72552266
|
- |
- |
|
rs72552267
|
LB/B |
- |
|
rs72552799
|
LB/B |
- |
|
rs72558189
|
- |
- |
|
rs72558191
|
Pathogenic |
Warfarin response [MONDO:MONDO:0007390,MedGen:C0750384,OMIM:122700] |
|
rs72558192
|
- |
- |
|
rs74451421
|
- |
- |
|
rs747209153
|
- |
- |
|
rs747659245
|
- |
- |
|
rs749485571
|
- |
- |
|
rs749574339
|
- |
- |
|
rs750389182
|
- |
- |
|
rs751304482
|
- |
- |
|
rs752132182
|
- |
- |
|
rs752133024
|
- |
- |
|
rs752311258
|
- |
- |
|
rs752456881
|
LB/B |
- |
|
rs752731774
|
- |
- |
|
rs753270728
|
- |
- |
|
rs754993807
|
- |
- |
|
rs756117252
|
- |
- |
|
rs756271054
|
- |
- |
|
rs756817759
|
Pathogenic |
Cortisone reductase deficiency 2 [MONDO:MONDO:0013842,MedGen:C3553382,OMIM:614662,Orphanet:168588] |
|
rs756827825
|
- |
- |
|
rs75703079
|
- |
- |
|
rs757338859
|
LB/B |
- |
|
rs758625590
|
- |
- |
|
rs758885507
|
- |
- |
|
rs75967634
|
- |
- |
|
rs761042153
|
- |
- |
|
rs761407628
|
- |
- |
|
rs763329185
|
- |
- |
|
rs763392896
|
- |
- |
|
rs763625282
|
- |
- |
|
rs764137538
|
- |
- |
|
rs764153937
|
- |
- |
|
rs765456449
|
- |
- |
|
rs765892707
|
- |
- |
|
rs766107094
|
- |
- |
|
rs767243204
|
- |
- |
|
rs767434442
|
- |
- |
|
rs768697532
|
- |
- |
|
rs768830601
|
- |
- |
|
rs769763635
|
- |
- |
|
rs771331384
|
- |
- |
|
rs772620790
|
- |
- |
|
rs772897551
|
LB/B |
- |
|
rs773593573
|
- |
- |
|
rs774168721
|
- |
- |
|
rs774638750
|
- |
- |
|
rs774997677
|
- |
- |
|
rs776567184
|
- |
- |
|
rs776843927
|
- |
- |
|
rs776908257
|
- |
- |
|
rs777237591
|
- |
- |
|
rs777678299
|
- |
- |
|
rs778816311
|
- |
- |
|
rs779989195
|
- |
- |
|
rs780039093
|
- |
- |
|
rs781200594
|
- |
- |
|
rs781507152
|
- |
- |
|
rs781583846
|
- |
- |
|
rs782266548
|
- |
- |
|
rs782328441
|
- |
- |
|
rs79500998
|
- |
- |
|
rs8192111
|
LB/B |
- |
|
rs865845501
|
- |
- |
|
rs868208502
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs9282670
|
LB/B |
- |
|
rs9282671
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs9341248
|
LB/B |
- |
|
rs984091958
|
- |
- |
rn00981
|
Insect hormone biosynthesis
|
dbSNP |
Type |
Disease name |
|
-
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
.
|
- |
- |
|
rs1170817007
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs121912707
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Seizure|Pyridoxine-dependent epilepsy caused by ALDH7A1 mutant [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|Human Phenotype Ontology:HP:0001250,Human Phenotype Ontology:HP:0001275,Human Phenotype Ontology:HP:0001303,Human Phenotype Ontology:HP:0002125,Human Phenotype Ontology:HP:0002182,Human Phenotype Ontology:HP:0002279,Human Phenotype Ontology:HP:0002306,Human Phenotype Ontology:HP:0002348,Human Phenotype Ontology:HP:0002391,Human Phenotype Ontology:HP:0002417,Human Phenotype Ontology:HP:0002430,Human Phenotype Ontology:HP:0002431,Human Phenotype Ontology:HP:0002432,Human Phenotype Ontology:HP:0002434,Human Phenotype Ontology:HP:0002437,Human Phenotype Ontology:HP:0002466,Human Phenotype Ontology:HP:0002479,Human Phenotype Ontology:HP:0002794,Human Phenotype Ontology:HP:0006997,Human Phenotype Ontology:HP:0010520,MedGen:C0036572|MONDO:MONDO:0020741,MedGen:CN293409] |
|
rs121912711
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs1311982393
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1750309299
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1750388096
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs201948406
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Inborn genetic diseases [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs372660425
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs761295869
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs773503933
|
- |
- |
|
rs776421832
|
- |
- |
|
rs796052271
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs864622558
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
hsa00982
|
Drug metabolism - cytochrome P450
|
dbSNP |
Type |
Disease name |
|
-
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
-
|
LP/P |
Microphthalmia, isolated, 8 (MCOP8) [MIM:615113] |
|
-
|
Likely pathogenic |
Isolated microphthalmia 8 [MONDO:MONDO:0014050,MedGen:C3554524,OMIM:615113,Orphanet:2542] |
|
-
|
Likely pathogenic |
Anterior segment dysgenesis 6 [MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
-
|
Likely pathogenic |
Anterior segment dysgenesis [Human Phenotype Ontology:HP:0007696,Human Phenotype Ontology:HP:0007699,Human Phenotype Ontology:HP:0007700,Human Phenotype Ontology:HP:0008040,MONDO:MONDO:0019503,MedGen:C1862839,OMIM:PS107250,Orphanet:88632] |
|
.
|
- |
- |
|
rs1041969
|
LB/B |
- |
|
rs104893628
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs104894979
|
Likely pathogenic |
Glaucoma 3A|Anterior segment dysgenesis 6 [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
rs1052661
|
LB/B |
- |
|
rs1056837
|
LB/B |
- |
|
rs1057910
|
- |
- |
|
rs1126673
|
- |
- |
|
rs11509436
|
LB/B |
- |
|
rs115638369
|
- |
- |
|
rs117111102
|
- |
- |
|
rs118203757
|
- |
- |
|
rs1200476864
|
- |
- |
|
rs1207708075
|
- |
- |
|
rs1223667143
|
- |
- |
|
rs1229984
|
LB/B |
- |
|
rs12414460
|
- |
- |
|
rs1257727040
|
- |
- |
|
rs12721627
|
LB/B |
- |
|
rs12721629
|
LB/B |
- |
|
rs1278639064
|
- |
- |
|
rs1292504288
|
- |
- |
|
rs1298397471
|
- |
- |
|
rs1309748501
|
- |
- |
|
rs1326916949
|
- |
- |
|
rs138014515
|
- |
- |
|
rs138105638
|
- |
- |
|
rs138112316
|
- |
- |
|
rs138142612
|
LB/B |
- |
|
rs139238143
|
- |
- |
|
rs139250712
|
- |
- |
|
rs140111676
|
- |
- |
|
rs1412501773
|
- |
- |
|
rs141489852
|
- |
- |
|
rs141774245
|
- |
- |
|
rs145669559
|
- |
- |
|
rs145774441
|
- |
- |
|
rs146180463
|
- |
- |
|
rs1471862905
|
- |
- |
|
rs148542782
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs148593307
|
- |
- |
|
rs1486164573
|
- |
- |
|
rs149081683
|
- |
- |
|
rs149408684
|
- |
- |
|
rs1558603396
|
Likely pathogenic |
Glaucoma 3A|Anterior segment dysgenesis 6 [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
rs1695
|
LB/B |
- |
|
rs17884712
|
LB/B |
- |
|
rs1815413655
|
LP/P |
Vitamin D-dependent rickets 3 (VDDR3) [MIM:619073] |
|
rs184571563
|
- |
- |
|
rs192154563
|
LB/B |
- |
|
rs199558694
|
- |
- |
|
rs200183364
|
- |
- |
|
rs200346442
|
- |
- |
|
rs200965026
|
- |
- |
|
rs201286895
|
- |
- |
|
rs201934016
|
- |
- |
|
rs202002774
|
- |
- |
|
rs2066702
|
LB/B |
- |
|
rs2125316074
|
Pathogenic/Likely pathogenic |
Glaucoma 3A|Primary congenital glaucoma [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|Human Phenotype Ontology:HP:0008007,MONDO:MONDO:0000365,MedGen:C1533041] |
|
rs2296681
|
- |
- |
|
rs2397118
|
- |
- |
|
rs28371759
|
LB/B |
- |
|
rs28730628
|
LB/B |
- |
|
rs28936701
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs28936701
|
Pathogenic |
Glaucoma 3A|not provided|Congenital glaucoma|Primary congenital glaucoma|Anterior segment dysgenesis 6 [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MedGen:C3661900|MONDO:MONDO:0020366,MedGen:C0020302|Human Phenotype Ontology:HP:0008007,MONDO:MONDO:0000365,MedGen:C1533041|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
rs3208363
|
LB/B |
- |
|
rs35385902
|
LB/B |
- |
|
rs367826293
|
- |
- |
|
rs367861880
|
- |
- |
|
rs368758960
|
- |
- |
|
rs368767518
|
- |
- |
|
rs371911407
|
- |
- |
|
rs373232513
|
- |
- |
|
rs374926260
|
- |
- |
|
rs375805362
|
- |
- |
|
rs377699817
|
- |
- |
|
rs41286880
|
- |
- |
|
rs41286884
|
- |
- |
|
rs41291556
|
LB/B |
- |
|
rs449856
|
LB/B |
- |
|
rs45529437
|
LB/B |
- |
|
rs4986908
|
LB/B |
- |
|
rs4986910
|
LB/B |
- |
|
rs4987161
|
LB/B |
- |
|
rs543931018
|
- |
- |
|
rs547918064
|
- |
- |
|
rs547918064
|
Likely pathogenic |
not provided|Isolated microphthalmia 8 [MedGen:C3661900|MONDO:MONDO:0014050,MedGen:C3554524,OMIM:615113,Orphanet:2542] |
|
rs55785340
|
LB/B |
- |
|
rs557905773
|
- |
- |
|
rs55901263
|
LB/B |
- |
|
rs55951658
|
LB/B |
- |
|
rs55989760
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs55989760
|
Pathogenic/Likely pathogenic |
Glaucoma 3A|Primary congenital glaucoma|not provided|Glaucoma of childhood|Anterior segment dysgenesis 6|Congenital glaucoma|Glaucoma 3A [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|Human Phenotype Ontology:HP:0008007,MONDO:MONDO:0000365,MedGen:C1533041|MedGen:C3661900|Human Phenotype Ontology:HP:0001087,MONDO:MONDO:0020367,MedGen:C2981140,Orphanet:98977|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315|MONDO:MONDO:0020366,MedGen:C0020302|MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977]; Glaucoma 3, primary infantile, B [MONDO:MONDO:0010968,MedGen:C1832977,OMIM:600975,Orphanet:98976]; Anterior segment dysgenesis 6 [MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
rs56010818
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs56010818
|
Pathogenic/Likely pathogenic |
not provided|Anterior segment dysgenesis 6|Glaucoma 3A|Congenital glaucoma [MedGen:C3661900|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315|MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MONDO:MONDO:0020366,MedGen:C0020302] |
|
rs56251804
|
- |
- |
|
rs56324128
|
LB/B |
- |
|
rs56337013
|
LB/B |
- |
|
rs574462231
|
- |
- |
|
rs57505750
|
- |
- |
|
rs57865060
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs59472972
|
- |
- |
|
rs59472972
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs59734894
|
- |
- |
|
rs66583685
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs67784355
|
LB/B |
- |
|
rs72549378
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs72552267
|
LB/B |
- |
|
rs72552799
|
LB/B |
- |
|
rs72558189
|
- |
- |
|
rs72558191
|
Pathogenic |
Warfarin response [MONDO:MONDO:0007390,MedGen:C0750384,OMIM:122700] |
|
rs72558192
|
- |
- |
|
rs74451421
|
- |
- |
|
rs747209153
|
- |
- |
|
rs749574339
|
- |
- |
|
rs750389182
|
- |
- |
|
rs752133024
|
- |
- |
|
rs752456881
|
LB/B |
- |
|
rs752731774
|
- |
- |
|
rs753270728
|
- |
- |
|
rs753847648
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs754993807
|
- |
- |
|
rs756271054
|
- |
- |
|
rs75967634
|
- |
- |
|
rs761042153
|
- |
- |
|
rs763392896
|
- |
- |
|
rs763625282
|
- |
- |
|
rs764137538
|
- |
- |
|
rs765456449
|
- |
- |
|
rs766107094
|
- |
- |
|
rs767434442
|
- |
- |
|
rs768697532
|
- |
- |
|
rs768830601
|
- |
- |
|
rs769763635
|
- |
- |
|
rs771331384
|
- |
- |
|
rs774109750
|
- |
- |
|
rs774168721
|
- |
- |
|
rs774638750
|
- |
- |
|
rs774997677
|
- |
- |
|
rs776567184
|
- |
- |
|
rs776908257
|
- |
- |
|
rs777237591
|
- |
- |
|
rs777678299
|
- |
- |
|
rs778816311
|
- |
- |
|
rs779989195
|
- |
- |
|
rs780039093
|
- |
- |
|
rs781507152
|
- |
- |
|
rs781583846
|
- |
- |
|
rs79500998
|
- |
- |
|
rs8192111
|
LB/B |
- |
|
rs9282670
|
LB/B |
- |
|
rs9341250
|
LB/B |
- |
|
rs944452644
|
Likely pathogenic |
Glaucoma 3A|Anterior segment dysgenesis 6 [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
hsa00983
|
Drug metabolism - other enzymes
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Dihydropyrimidine dehydrogenase deficiency [MONDO:MONDO:0010130,MedGen:C1959620,OMIM:274270,Orphanet:1675] |
|
-
|
LP/P |
Lesch-Nyhan syndrome (LNS) [MIM:300322] |
|
-
|
Pathogenic |
Lesch-Nyhan syndrome [MONDO:MONDO:0010298,MedGen:C0023374,OMIM:300322,Orphanet:510]; Partial hypoxanthine-guanine phosphoribosyltransferase deficiency [MONDO:MONDO:0010299,MedGen:C0268117,OMIM:300323,Orphanet:79233] |
|
-
|
LP/P |
Hyperuricemia, HPRT-related (HRH) [MIM:300323] |
|
.
|
- |
- |
|
rs1041988
|
LB/B |
- |
|
rs1052661
|
LB/B |
- |
|
rs1057516671
|
Likely pathogenic |
Dihydropyrimidine dehydrogenase deficiency [MONDO:MONDO:0010130,MedGen:C1959620,OMIM:274270,Orphanet:1675] |
|
rs1064792855
|
Likely pathogenic |
Mitochondrial DNA depletion syndrome 1 [MONDO:MONDO:0011283,MedGen:C4551995,OMIM:603041,Orphanet:298] |
|
rs1064792867
|
Pathogenic |
Mitochondrial DNA depletion syndrome 1 [MONDO:MONDO:0011283,MedGen:C4551995,OMIM:603041,Orphanet:298] |
|
rs11509436
|
LB/B |
- |
|
rs115222424
|
- |
- |
|
rs119469012
|
Pathogenic |
Myeloperoxidase deficiency [MONDO:MONDO:0009694,MedGen:C0398595,OMIM:254600,Orphanet:2587] |
|
rs119469013
|
Pathogenic |
Myeloperoxidase deficiency [MONDO:MONDO:0009694,MedGen:C0398595,OMIM:254600,Orphanet:2587] |
|
rs119469014
|
- |
- |
|
rs119469014
|
Pathogenic |
Myeloperoxidase deficiency [MONDO:MONDO:0009694,MedGen:C0398595,OMIM:254600,Orphanet:2587] |
|
rs1200476864
|
- |
- |
|
rs1207708075
|
- |
- |
|
rs121912777
|
- |
- |
|
rs121912777
|
Pathogenic |
DRUG METABOLISM, ALTERED, CES1-RELATED [MedGen:C4748035,OMIM:618057] |
|
rs121913037
|
LP/P |
Mitochondrial DNA depletion syndrome 1, MNGIE type (MTDPS1) [MIM:603041] |
|
rs121913039
|
Pathogenic/Likely pathogenic |
Mitochondrial DNA depletion syndrome 1|not provided [MONDO:MONDO:0011283,MedGen:C4551995,OMIM:603041,Orphanet:298|MedGen:C3661900] |
|
rs121913041
|
Likely pathogenic |
Mitochondrial DNA depletion syndrome 1|not provided [MONDO:MONDO:0011283,MedGen:C4551995,OMIM:603041,Orphanet:298|MedGen:CN517202] |
|
rs121917887
|
LB/B |
- |
|
rs1222936229
|
- |
- |
|
rs1223667143
|
- |
- |
|
rs12721627
|
LB/B |
- |
|
rs12721629
|
LB/B |
- |
|
rs1292504288
|
- |
- |
|
rs1309748501
|
- |
- |
|
rs1326916949
|
- |
- |
|
rs137852485
|
LP/P |
Hyperuricemia, HPRT-related (HRH) [MIM:300323] |
|
rs137852487
|
LP/P |
Lesch-Nyhan syndrome (LNS) [MIM:300322] |
|
rs137852487
|
Pathogenic |
HPRT NEW HAVEN|Lesch-Nyhan syndrome|Partial hypoxanthine-guanine phosphoribosyltransferase deficiency [|MONDO:MONDO:0010298,MedGen:C0023374,OMIM:300322,Orphanet:510|MONDO:MONDO:0010299,MedGen:C0268117,OMIM:300323,Orphanet:79233]; Lesch-Nyhan syndrome [MONDO:MONDO:0010298,MedGen:C0023374,OMIM:300322,Orphanet:510] |
|
rs137852488
|
LP/P |
Lesch-Nyhan syndrome (LNS) [MIM:300322] |
|
rs137852489
|
Pathogenic |
Lesch-Nyhan syndrome|Lesch-Nyhan syndrome [MONDO:MONDO:0010298,MedGen:C0023374,OMIM:300322,Orphanet:510|MONDO:MONDO:0010298,MedGen:C0023374,OMIM:300322,Orphanet:510]; Partial hypoxanthine-guanine phosphoribosyltransferase deficiency [MONDO:MONDO:0010299,MedGen:C0268117,OMIM:300323,Orphanet:79233] |
|
rs137852496
|
LP/P |
Lesch-Nyhan syndrome (LNS) [MIM:300322] |
|
rs137852497
|
Pathogenic |
Lesch-Nyhan syndrome|Partial hypoxanthine-guanine phosphoribosyltransferase deficiency [MONDO:MONDO:0010298,MedGen:C0023374,OMIM:300322,Orphanet:510|MONDO:MONDO:0010299,MedGen:C0268117,OMIM:300323,Orphanet:79233]; Lesch-Nyhan syndrome [MONDO:MONDO:0010298,MedGen:C0023374,OMIM:300322,Orphanet:510] |
|
rs137852498
|
LP/P |
Hyperuricemia, HPRT-related (HRH) [MIM:300323] |
|
rs137852504
|
LP/P |
Hyperuricemia, HPRT-related (HRH) [MIM:300323] |
|
rs138014515
|
- |
- |
|
rs138110445
|
- |
- |
|
rs140602333
|
- |
- |
|
rs1412501773
|
- |
- |
|
rs1440561057
|
- |
- |
|
rs145669559
|
- |
- |
|
rs145774441
|
- |
- |
|
rs149081683
|
- |
- |
|
rs149977726
|
LP/P |
Mitochondrial DNA depletion syndrome 1, MNGIE type (MTDPS1) [MIM:603041] |
|
rs1557548856
|
- |
- |
|
rs1695
|
LB/B |
- |
|
rs17843776
|
- |
- |
|
rs1799931
|
LB/B |
- |
|
rs1801266
|
- |
- |
|
rs1815413655
|
LP/P |
Vitamin D-dependent rickets 3 (VDDR3) [MIM:619073] |
|
rs199558694
|
- |
- |
|
rs200707504
|
- |
- |
|
rs200819121
|
- |
- |
|
rs201047833
|
- |
- |
|
rs201286895
|
- |
- |
|
rs201461737
|
- |
- |
|
rs202002774
|
- |
- |
|
rs2122346498
|
Pathogenic/Likely pathogenic |
Inosine triphosphatase deficiency|Infantile epileptic dyskinetic encephalopathy [MONDO:MONDO:0013461,MedGen:C0342800,OMIM:613850|MONDO:MONDO:0018226,MedGen:C4552072,Orphanet:364063] |
|
rs2124291450
|
Pathogenic |
Partial hypoxanthine-guanine phosphoribosyltransferase deficiency [MONDO:MONDO:0010299,MedGen:C0268117,OMIM:300323,Orphanet:79233]; Lesch-Nyhan syndrome [MONDO:MONDO:0010298,MedGen:C0023374,OMIM:300322,Orphanet:510] |
|
rs2124302024
|
Pathogenic |
Partial hypoxanthine-guanine phosphoribosyltransferase deficiency [MONDO:MONDO:0010299,MedGen:C0268117,OMIM:300323,Orphanet:79233]; Lesch-Nyhan syndrome [MONDO:MONDO:0010298,MedGen:C0023374,OMIM:300322,Orphanet:510] |
|
rs2397118
|
- |
- |
|
rs267606863
|
LP/P |
Lesch-Nyhan syndrome (LNS) [MIM:300322] |
|
rs28383477
|
- |
- |
|
rs368327291
|
- |
- |
|
rs368366043
|
- |
- |
|
rs371911407
|
- |
- |
|
rs372231982
|
- |
- |
|
rs373232513
|
- |
- |
|
rs374926260
|
- |
- |
|
rs375834447
|
- |
- |
|
rs3826192
|
- |
- |
|
rs3826193
|
- |
- |
|
rs449856
|
LB/B |
- |
|
rs45529437
|
LB/B |
- |
|
rs4986782
|
LB/B |
- |
|
rs4986783
|
LB/B |
- |
|
rs4986910
|
LB/B |
- |
|
rs4986996
|
LB/B |
- |
|
rs4987161
|
LB/B |
- |
|
rs537106281
|
- |
- |
|
rs549266010
|
- |
- |
|
rs55785340
|
LB/B |
- |
|
rs55951658
|
LB/B |
- |
|
rs56387565
|
LB/B |
- |
|
rs67784355
|
LB/B |
- |
|
rs71647871
|
LB/B |
- |
|
rs72552799
|
LB/B |
- |
|
rs72554609
|
LB/B |
- |
|
rs748876242
|
- |
- |
|
rs749102851
|
- |
- |
|
rs750433997
|
- |
- |
|
rs752133024
|
- |
- |
|
rs752731774
|
- |
- |
|
rs753062060
|
- |
- |
|
rs753258609
|
- |
- |
|
rs754993807
|
- |
- |
|
rs756271054
|
- |
- |
|
rs756580671
|
- |
- |
|
rs756684474
|
- |
- |
|
rs760099482
|
- |
- |
|
rs761020434
|
- |
- |
|
rs761665644
|
Pathogenic |
Mitochondrial DNA depletion syndrome 1 [MONDO:MONDO:0011283,MedGen:C4551995,OMIM:603041,Orphanet:298] |
|
rs763630436
|
- |
- |
|
rs765396900
|
- |
- |
|
rs766107094
|
- |
- |
|
rs767434442
|
- |
- |
|
rs771331384
|
- |
- |
|
rs771572116
|
- |
- |
|
rs773499729
|
- |
- |
|
rs774168721
|
- |
- |
|
rs774638750
|
- |
- |
|
rs776567184
|
- |
- |
|
rs776843927
|
- |
- |
|
rs778421449
|
- |
- |
|
rs778524104
|
- |
- |
|
rs778816311
|
- |
- |
|
rs7867616
|
- |
- |
|
rs8192111
|
LB/B |
- |
|
rs895833357
|
- |
- |
rn00984
|
Steroid degradation
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
.
|
- |
- |
|
rs1202368985
|
- |
- |
|
rs13222
|
LP/P |
46,XY sex reversal 8 (SRXY8) [MIM:614279] |
|
rs138675307
|
- |
- |
|
rs1392361503
|
Pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs1405313151
|
- |
- |
|
rs142529153
|
- |
- |
|
rs144457204
|
- |
- |
|
rs1477251308
|
- |
- |
|
rs149295644
|
- |
- |
|
rs1561442127
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs1564317029
|
- |
- |
|
rs17134592
|
- |
- |
|
rs200908381
|
- |
- |
|
rs2854482
|
- |
- |
|
rs370245703
|
- |
- |
|
rs370433029
|
- |
- |
|
rs374810645
|
- |
- |
|
rs550705310
|
- |
- |
|
rs749485571
|
- |
- |
|
rs763857057
|
- |
- |
|
rs772780687
|
- |
- |
|
rs779490029
|
- |
- |
|
rs781200594
|
- |
- |
|
rs782266548
|
- |
- |
|
rs782328441
|
- |
- |
|
rs782421321
|
- |
- |
|
rs80133417
|
- |
- |
|
rs887438250
|
- |
- |
rn00999
|
Biosynthesis of various plant secondary metabolites
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Hepatic methionine adenosyltransferase deficiency [MONDO:MONDO:0009607,MedGen:C0268621,OMIM:250850,Orphanet:168598] |
|
.
|
- |
- |
|
rs118204001
|
Likely pathogenic |
Hepatic methionine adenosyltransferase deficiency [MONDO:MONDO:0009607,MedGen:C0268621,OMIM:250850,Orphanet:168598] |
|
rs118204005
|
Pathogenic |
Hepatic methionine adenosyltransferase deficiency [MONDO:MONDO:0009607,MedGen:C0268621,OMIM:250850,Orphanet:168598] |
|
rs1241692940
|
Pathogenic |
Hepatic methionine adenosyltransferase deficiency [MONDO:MONDO:0009607,MedGen:C0268621,OMIM:250850,Orphanet:168598] |
|
rs138556525
|
Pathogenic |
not provided|Hepatic methionine adenosyltransferase deficiency|MAT1A-related condition [MedGen:C3661900|MONDO:MONDO:0009607,MedGen:C0268621,OMIM:250850,Orphanet:168598|] |
|
rs72558181
|
Pathogenic |
Hepatic methionine adenosyltransferase deficiency|not provided [MONDO:MONDO:0009607,MedGen:C0268621,OMIM:250850,Orphanet:168598|MedGen:C3661900] |
hsa01040
|
Biosynthesis of unsaturated fatty acids
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
-
|
Pathogenic |
Acyl-CoA oxidase deficiency [MONDO:MONDO:0009919,MedGen:C1849678,OMIM:264470,Orphanet:2971] |
|
-
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
.
|
- |
- |
|
rs1049568
|
- |
- |
|
rs112441786
|
- |
- |
|
rs1135640
|
- |
- |
|
rs118204090
|
Pathogenic |
Acyl-CoA oxidase deficiency [MONDO:MONDO:0009919,MedGen:C1849678,OMIM:264470,Orphanet:2971] |
|
rs118204091
|
- |
- |
|
rs118204091
|
Pathogenic |
Acyl-CoA oxidase deficiency [MONDO:MONDO:0009919,MedGen:C1849678,OMIM:264470,Orphanet:2971] |
|
rs118204092
|
Pathogenic |
Acyl-CoA oxidase deficiency [MONDO:MONDO:0009919,MedGen:C1849678,OMIM:264470,Orphanet:2971] |
|
rs1202368985
|
- |
- |
|
rs1245431558
|
- |
- |
|
rs1259755308
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs13222
|
Pathogenic |
46,XY disorder of sex development due to testicular 17,20-desmolase deficiency [Gene:6994,MONDO:MONDO:0013664,MedGen:C1839840,OMIM:614279,Orphanet:443087] |
|
rs1363857729
|
- |
- |
|
rs137852695
|
Pathogenic |
Neuronal ceroid lipofuscinosis 1|not provided|Neuronal ceroid lipofuscinosis|Inborn genetic diseases [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MedGen:C3661900|MONDO:MONDO:0016295,MedGen:C0027877,OMIM:PS256730,Orphanet:216,Orphanet:79263|MeSH:D030342,MedGen:C0950123] |
|
rs137852696
|
Pathogenic |
Neuronal ceroid lipofuscinosis 1|not provided|Retinitis pigmentosa|Inborn genetic diseases|PPT1-related condition [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MedGen:C3661900|Human Phenotype Ontology:HP:0000547,MONDO:MONDO:0019200,MeSH:D012174,MedGen:C0035334,OMIM:268000,OMIM:PS268000,Orphanet:791|MeSH:D030342,MedGen:C0950123|] |
|
rs137852697
|
Pathogenic/Likely pathogenic |
Neuronal ceroid lipofuscinosis 1|not provided [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MedGen:C3661900] |
|
rs137852698
|
Pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs137852700
|
- |
- |
|
rs137852700
|
Pathogenic/Likely pathogenic |
Neuronal ceroid lipofuscinosis 1|not provided|Neuronal Ceroid-Lipofuscinosis, Recessive|Neuronal ceroid lipofuscinosis|Inborn genetic diseases|PPT1-related condition [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MedGen:C3661900|MedGen:CN239323|MONDO:MONDO:0016295,MedGen:C0027877,OMIM:PS256730,Orphanet:216,Orphanet:79263|MeSH:D030342,MedGen:C0950123|] |
|
rs137852702
|
Pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs138675307
|
- |
- |
|
rs1392361503
|
Pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs140387106
|
- |
- |
|
rs143657539
|
Pathogenic/Likely pathogenic |
Inborn genetic diseases|Neuronal ceroid lipofuscinosis 1|Neuronal ceroid lipofuscinosis [MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MONDO:MONDO:0016295,MedGen:C0027877,OMIM:PS256730,Orphanet:216,Orphanet:79263] |
|
rs144457204
|
- |
- |
|
rs147168294
|
- |
- |
|
rs1477443863
|
Pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs148412181
|
Pathogenic/Likely pathogenic |
Neuronal ceroid lipofuscinosis 1|not provided|Neuronal ceroid lipofuscinosis|Global developmental delay [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MedGen:C3661900|MONDO:MONDO:0016295,MedGen:C0027877,OMIM:PS256730,Orphanet:216,Orphanet:79263|Human Phenotype Ontology:HP:0000754,Human Phenotype Ontology:HP:0001255,Human Phenotype Ontology:HP:0001263,Human Phenotype Ontology:HP:0001277,Human Phenotype Ontology:HP:0001292,Human Phenotype Ontology:HP:0002433,Human Phenotype Ontology:HP:0002473,Human Phenotype Ontology:HP:0002532,Human Phenotype Ontology:HP:0006793,Human Phenotype Ontology:HP:0006867,Human Phenotype Ontology:HP:0006885,Human Phenotype Ontology:HP:0006935,Human Phenotype Ontology:HP:0007005,Human Phenotype Ontology:HP:0007094,Human Phenotype Ontology:HP:0007106,Human Phenotype Ontology:HP:0007174,Human Phenotype Ontology:HP:0007224,Human Phenotype Ontology:HP:0007228,Human Phenotype Ontology:HP:0007342,Human Phenotype Ontology:HP:0025356,MedGen:C0557874] |
|
rs148412181
|
Pathogenic/Likely pathogenic |
Neuronal ceroid lipofuscinosis 1|Retinitis pigmentosa|not provided|Inborn genetic diseases [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|Human Phenotype Ontology:HP:0000547,MONDO:MONDO:0019200,MeSH:D012174,MedGen:C0035334,OMIM:268000,OMIM:PS268000,Orphanet:791|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs149033118
|
- |
- |
|
rs149295644
|
- |
- |
|
rs1557714302
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs1561442127
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs1564317029
|
- |
- |
|
rs1567876984
|
Pathogenic/Likely pathogenic |
ACOX1-related condition|Mitchell syndrome|not provided|ACOX1-related disorders|Acyl-CoA oxidase deficiency|Inborn genetic diseases [|MONDO:MONDO:0030073,MedGen:C5394554,OMIM:618960|MedGen:C3661900||MONDO:MONDO:0009919,MedGen:C1849678,OMIM:264470,Orphanet:2971|MeSH:D030342,MedGen:C0950123] |
|
rs1649619197
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs17134592
|
- |
- |
|
rs1749878115
|
Pathogenic/Likely pathogenic |
Perrault syndrome 1|Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009300,MedGen:C4551721,OMIM:233400,Orphanet:2855|MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300]; Perrault syndrome|Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855|MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs200908381
|
- |
- |
|
rs202093592
|
- |
- |
|
rs2124470378
|
Pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs2124474566
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs2124484378
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs370245703
|
- |
- |
|
rs370433029
|
- |
- |
|
rs371834662
|
- |
- |
|
rs3744032
|
- |
- |
|
rs374671936
|
- |
- |
|
rs374810645
|
- |
- |
|
rs375253960
|
- |
- |
|
rs386833626
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833627
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833647
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833648
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833649
|
- |
- |
|
rs386833649
|
Pathogenic/Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833650
|
Pathogenic |
Neuronal ceroid lipofuscinosis 1|not provided [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MedGen:C3661900] |
|
rs386833654
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833655
|
- |
- |
|
rs386833655
|
Pathogenic/Likely pathogenic |
Neuronal ceroid lipofuscinosis 1|not provided|Inborn genetic diseases|Neuronal ceroid lipofuscinosis [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MedGen:C3661900|MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0016295,MedGen:C0027877,OMIM:PS256730,Orphanet:216,Orphanet:79263] |
|
rs386833656
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833657
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833658
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833661
|
Pathogenic/Likely pathogenic |
Neuronal ceroid lipofuscinosis 1|Neuronal ceroid lipofuscinosis|Spastic ataxia [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MONDO:MONDO:0016295,MedGen:C0027877,OMIM:PS256730,Orphanet:216,Orphanet:79263|Human Phenotype Ontology:HP:0002497,MONDO:MONDO:0017845,MedGen:C1849156,OMIM:PS108600,Orphanet:316226] |
|
rs386833663
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833665
|
Pathogenic/Likely pathogenic |
Neuronal ceroid lipofuscinosis 1|not provided|Neuronal ceroid lipofuscinosis [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MedGen:C3661900|MONDO:MONDO:0016295,MedGen:C0027877,OMIM:PS256730,Orphanet:216,Orphanet:79263] |
|
rs386833666
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833668
|
Pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833669
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs545752791
|
- |
- |
|
rs550705310
|
- |
- |
|
rs556081405
|
- |
- |
|
rs566644923
|
- |
- |
|
rs574370650
|
- |
- |
|
rs749485571
|
- |
- |
|
rs752546604
|
- |
- |
|
rs763463911
|
- |
- |
|
rs763536047
|
- |
- |
|
rs763857057
|
- |
- |
|
rs764051026
|
Likely pathogenic |
not provided|Neuronal ceroid lipofuscinosis 1 [MedGen:C3661900|MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs766961054
|
- |
- |
|
rs768550964
|
- |
- |
|
rs772780687
|
- |
- |
|
rs774809147
|
- |
- |
|
rs776806726
|
- |
- |
|
rs776965057
|
- |
- |
|
rs779490029
|
- |
- |
|
rs779634821
|
- |
- |
|
rs780868134
|
- |
- |
|
rs781200594
|
- |
- |
|
rs781376792
|
- |
- |
|
rs782266548
|
- |
- |
|
rs782328441
|
- |
- |
|
rs782421321
|
- |
- |
|
rs796052925
|
Pathogenic/Likely pathogenic |
not provided|Neuronal ceroid lipofuscinosis 1 [MedGen:C3661900|MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs80133417
|
- |
- |
|
rs866346652
|
- |
- |
|
rs878853322
|
Pathogenic/Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs878853323
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs878853324
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs887438250
|
- |
- |
hsa01100
|
Metabolic pathways
|
dbSNP |
Type |
Disease name |
|
-
|
Likely pathogenic |
Severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-negative, NK cell-negative, due to adenosine deaminase deficiency [MONDO:MONDO:0007064,MedGen:C1863236,OMIM:102700,Orphanet:277] |
|
-
|
Likely pathogenic |
Pseudohypoparathyroidism type I A [MONDO:MONDO:0007078,MedGen:C3494506,OMIM:103580,Orphanet:79443] |
|
-
|
LP/P |
Sotos syndrome (SOTOS) [MIM:117550] |
|
-
|
Likely pathogenic |
Sotos syndrome [MedGen:C0175695,OMIM:117550,Orphanet:821] |
|
-
|
LP/P |
Hereditary coproporphyria (HCP) [MIM:121300] |
|
-
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
-
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
-
|
Likely pathogenic |
Dystonia 12 [MONDO:MONDO:0007496,MedGen:C1868681,OMIM:128235,Orphanet:71517] |
|
-
|
LP/P |
Microcephaly with or without chorioretinopathy, lymphedema, or impaired intellectual development (MCLMR) [MIM:152950] |
|
-
|
Pathogenic |
not provided|Microcephaly with or without chorioretinopathy, lymphedema, or intellectual disability [MedGen:C3661900|MONDO:MONDO:0007918,MedGen:C1835265,OMIM:152950,Orphanet:2526] |
|
-
|
Pathogenic |
Visceral myopathy 1 [MONDO:MONDO:0020754,MedGen:C5542197,OMIM:155310,Orphanet:2604] |
|
-
|
Pathogenic |
Actin accumulation myopathy [MONDO:MONDO:0008070,MedGen:C3711389,OMIM:161800,Orphanet:98904] |
|
-
|
Pathogenic |
Familial multiple nevi flammei [MONDO:MONDO:0008094,MedGen:C2931029,OMIM:163000,Orphanet:624] |
|
-
|
LP/P |
Optic atrophy 1 (OPA1) [MIM:165500] |
|
-
|
US |
Inclusion body myopathy with early-onset Paget disease with or without frontotemporal dementia 1 (IBMPFD1) [MIM:167320] |
|
-
|
Pathogenic |
Paragangliomas 1 [MONDO:MONDO:0008192,MedGen:C3494181,OMIM:168000,Orphanet:29072] |
|
-
|
LP/P |
Porokeratosis 3, multiple types (POROK3) [MIM:175900] |
|
-
|
LP/P |
Hepatoerythropoietic porphyria (HEP) [MIM:176100] |
|
-
|
Likely pathogenic |
Familial porphyria cutanea tarda [MONDO:MONDO:0008296,MedGen:C0268323,OMIM:176100,Orphanet:101330,Orphanet:443062] |
|
-
|
LP/P |
Protoporphyria, erythropoietic, 1 (EPP1) [MIM:177000] |
|
-
|
Pathogenic/Likely pathogenic |
Protoporphyria, erythropoietic, 1|not provided [MONDO:MONDO:0008319,MedGen:C4692546,OMIM:177000,Orphanet:79278|MedGen:C3661900] |
|
-
|
Likely pathogenic |
Retinitis pigmentosa 10 [MONDO:MONDO:0008379,MedGen:C1867299,OMIM:180105,Orphanet:791] |
|
-
|
Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
-
|
LP/P |
Acyl-CoA dehydrogenase very long-chain deficiency (ACADVLD) [MIM:201475] |
|
-
|
LP/P |
Adrenal hyperplasia 5 (AH5) [MIM:202110] |
|
-
|
Likely pathogenic |
Deficiency of steroid 17-alpha-monooxygenase [MONDO:MONDO:0008730,MedGen:C0268285,OMIM:202110,Orphanet:90793] |
|
-
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
-
|
LP/P |
Argininemia (ARGIN) [MIM:207800] |
|
-
|
Pathogenic |
Arginase deficiency [MONDO:MONDO:0008814,MedGen:C0268548,OMIM:207800,Orphanet:90] |
|
-
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
|
-
|
Pathogenic |
Citrullinemia|Citrullinemia type I [Human Phenotype Ontology:HP:0032397,MONDO:MONDO:0015991,MedGen:C0175683,Orphanet:187|MONDO:MONDO:0008988,MedGen:C4721769,OMIM:215700,Orphanet:247525] |
|
-
|
LP/P |
Costello syndrome (CSTLO) [MIM:218040] |
|
-
|
Likely pathogenic |
ALDH18A1-related de Barsy syndrome [MONDO:MONDO:0009053,MedGen:C5234852,OMIM:219150,Orphanet:2962,Orphanet:35664] |
|
-
|
Likely pathogenic |
Cystic fibrosis [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586] |
|
-
|
Pathogenic |
Orthostatic hypotension 1 [MONDO:MONDO:0009123,MedGen:C4746777,OMIM:223360,Orphanet:230] |
|
-
|
Likely pathogenic |
Fructose-biphosphatase deficiency [MONDO:MONDO:0009251,MedGen:C0016756,OMIM:229700,Orphanet:348] |
|
-
|
LP/P |
Galactosemia 2 (GALAC2) [MIM:230200] |
|
-
|
Pathogenic |
Deficiency of galactokinase [MONDO:MONDO:0009255,MedGen:C0268155,OMIM:230200,Orphanet:352,Orphanet:79237] |
|
-
|
Pathogenic |
not provided|Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase [MedGen:C3661900|MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239] |
|
-
|
LP/P |
GM1-gangliosidosis 1 (GM1G1) [MIM:230500] |
|
-
|
Pathogenic |
Infantile GM1 gangliosidosis|Mucopolysaccharidosis, MPS-IV-B [MONDO:MONDO:0009260,MedGen:C0268271,OMIM:230500,Orphanet:354,Orphanet:79255|MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582]; GM1 gangliosidosis [MONDO:MONDO:0018149,MedGen:C0085131,Orphanet:354] |
|
-
|
LP/P |
GM1-gangliosidosis 2 (GM1G2) [MIM:230600] |
|
-
|
LP/P |
Gaucher disease 1 (GD1) [MIM:230800] |
|
-
|
LP/P |
Gaucher disease 2 (GD2) [MIM:230900] |
|
-
|
US |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
-
|
Likely pathogenic |
Deficiency of 3-hydroxyacyl-CoA dehydrogenase [MONDO:MONDO:0017715,MedGen:C1291230,OMIM:231530,Orphanet:309127,Orphanet:71212] |
|
-
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
-
|
Likely pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
-
|
Pathogenic |
Glycogen storage disease, type V [MONDO:MONDO:0009293,MedGen:C0017924,OMIM:232600,Orphanet:368] |
|
-
|
Likely pathogenic |
Glycogen storage disease, type VI [MONDO:MONDO:0009294,MedGen:C0017925,OMIM:232700,Orphanet:369] |
|
-
|
Likely pathogenic |
Glycogen storage disease, type VII [MONDO:MONDO:0009295,MedGen:C0017926,OMIM:232800,Orphanet:371] |
|
-
|
LP/P |
Neurodegeneration with brain iron accumulation 1 (NBIA1) [MIM:234200] |
|
-
|
Likely pathogenic |
Pigmentary pallidal degeneration [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850] |
|
-
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
-
|
Likely pathogenic |
Classic homocystinuria [MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394] |
|
-
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
-
|
Pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395] |
|
-
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
-
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
-
|
LP/P |
Immunodeficiency-centromeric instability-facial anomalies syndrome 1 (ICF1) [MIM:242860] |
|
-
|
Likely pathogenic |
Baraitser-Winter syndrome 1 [MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995]; Developmental malformations-deafness-dystonia syndrome [MONDO:MONDO:0011823,MedGen:C1846331,OMIM:607371,Orphanet:79107] |
|
-
|
LP/P |
Succinyl-CoA:3-oxoacid CoA transferase deficiency (SCOTD) [MIM:245050] |
|
-
|
Likely pathogenic |
Galactosylceramide beta-galactosidase deficiency [MONDO:MONDO:0009499,MedGen:C0023521,OMIM:245200,Orphanet:487] |
|
-
|
Pathogenic |
Mitochondrial DNA depletion syndrome 9 [MONDO:MONDO:0009504,MedGen:C3151476,OMIM:245400,Orphanet:17] |
|
-
|
LP/P |
3-hydroxy-3-methylglutaryl-CoA lyase deficiency (HMGCLD) [MIM:246450] |
|
-
|
Likely pathogenic |
Deficiency of hydroxymethylglutaryl-CoA lyase [MONDO:MONDO:0009520,MedGen:C0268601,OMIM:246450,Orphanet:20] |
|
-
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
-
|
Pathogenic |
Deficiency of malonyl-CoA decarboxylase [MONDO:MONDO:0009556,MedGen:C0342793,OMIM:248360,Orphanet:943] |
|
-
|
US |
Maple syrup urine disease 1A (MSUD1A) [MIM:248600] |
|
-
|
Pathogenic |
Beta-hydroxyisobutyryl-CoA deacylase deficiency [MONDO:MONDO:0009603,MedGen:C0342738,OMIM:250620,Orphanet:88639] |
|
-
|
Likely pathogenic |
Hepatic methionine adenosyltransferase deficiency [MONDO:MONDO:0009607,MedGen:C0268621,OMIM:250850,Orphanet:168598] |
|
-
|
Likely pathogenic |
Methylmalonic aciduria, cblB type [MONDO:MONDO:0009614,MedGen:C1855102,OMIM:251110,Orphanet:28,Orphanet:79311] |
|
-
|
LP/P |
Desbuquois dysplasia 1 (DBQD1) [MIM:251450] |
|
-
|
LP/P |
Mucopolysaccharidosis 3B (MPS3B) [MIM:252920] |
|
-
|
Pathogenic |
GM1 gangliosidosis [MONDO:MONDO:0018149,MedGen:C0085131,Orphanet:354]; Mucopolysaccharidosis, MPS-IV-B [MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582] |
|
-
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
-
|
LP/P |
Osteopetrosis, autosomal recessive 3 (OPTB3) [MIM:259730] |
|
-
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
-
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type II|not provided [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599|MedGen:C3661900] |
|
-
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
-
|
LP/P |
Congenital erythropoietic porphyria (CEP) [MIM:263700] |
|
-
|
LP/P |
Postaxial acrofacial dysostosis (POADS) [MIM:263750] |
|
-
|
Pathogenic |
Acyl-CoA oxidase deficiency [MONDO:MONDO:0009919,MedGen:C1849678,OMIM:264470,Orphanet:2971] |
|
-
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
-
|
LP/P |
Glutathione synthetase deficiency (GSS deficiency) [MIM:266130] |
|
-
|
LP/P |
Pyruvate kinase deficiency of red cells (PKRD) [MIM:266200] |
|
-
|
Pathogenic/Likely pathogenic |
not provided|Pyruvate kinase deficiency of red cells [MedGen:C3661900|MONDO:MONDO:0009950,MedGen:C0340968,OMIM:266200,Orphanet:766] |
|
-
|
Likely pathogenic |
Sandhoff disease [MONDO:MONDO:0010006,MedGen:C0036161,OMIM:268800,Orphanet:796] |
|
-
|
Pathogenic |
Sialuria [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166]; GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602] |
|
-
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
-
|
Pathogenic |
Spongy degeneration of central nervous system [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141] |
|
-
|
LP/P |
Succinic semialdehyde dehydrogenase deficiency (SSADHD) [MIM:271980] |
|
-
|
Pathogenic |
Succinate-semialdehyde dehydrogenase deficiency [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22] |
|
-
|
LP/P |
GM2-gangliosidosis 1 (GM2G1) [MIM:272800] |
|
-
|
Pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
-
|
Likely pathogenic |
Dihydropyrimidine dehydrogenase deficiency [MONDO:MONDO:0010130,MedGen:C1959620,OMIM:274270,Orphanet:1675] |
|
-
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
-
|
Likely pathogenic |
Tyrosinemia type I [MONDO:MONDO:0010161,MedGen:C0268490,OMIM:276700,Orphanet:882] |
|
-
|
LP/P |
Tyrosinemia 3 (TYRSN3) [MIM:276710] |
|
-
|
LP/P |
Weaver syndrome (WVS) [MIM:277590] |
|
-
|
Likely pathogenic |
Weaver syndrome [MONDO:MONDO:0010193,MedGen:C0265210,OMIM:277590,Orphanet:3447] |
|
-
|
LP/P |
Lesch-Nyhan syndrome (LNS) [MIM:300322] |
|
-
|
Pathogenic |
Lesch-Nyhan syndrome [MONDO:MONDO:0010298,MedGen:C0023374,OMIM:300322,Orphanet:510]; Partial hypoxanthine-guanine phosphoribosyltransferase deficiency [MONDO:MONDO:0010299,MedGen:C0268117,OMIM:300323,Orphanet:79233] |
|
-
|
LP/P |
Hyperuricemia, HPRT-related (HRH) [MIM:300323] |
|
-
|
Likely pathogenic |
HSD10 mitochondrial disease [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295] |
|
-
|
LP/P |
Phosphoglycerate kinase 1 deficiency (PGK1D) [MIM:300653] |
|
-
|
LP/P |
Anemia, non-spherocytic hemolytic, due to G6PD deficiency (NSHA) [MIM:300908] |
|
-
|
Likely pathogenic |
Anemia, nonspherocytic hemolytic, due to G6PD deficiency [MONDO:MONDO:0010480,MedGen:C2720289,OMIM:300908,Orphanet:466026] |
|
-
|
LP/P |
Intellectual developmental disorder, X-linked, syndromic, Snijders Blok type (MRXSSB) [MIM:300958] |
|
-
|
Likely pathogenic |
Intellectual disability, X-linked 102 [MONDO:MONDO:0010497,MedGen:C5393299,OMIM:300958,Orphanet:457260] |
|
-
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
-
|
Pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
-
|
Likely pathogenic |
X-linked ichthyosis with steryl-sulfatase deficiency [MONDO:MONDO:0010622,MedGen:C0079588,OMIM:308100,Orphanet:461] |
|
-
|
Likely pathogenic |
Lowe syndrome [MONDO:MONDO:0010645,MedGen:C0028860,OMIM:309000,Orphanet:534] |
|
-
|
Likely pathogenic |
Syndromic X-linked intellectual disability Snyder type [MONDO:MONDO:0010664,MedGen:C0796160,OMIM:309583,Orphanet:3063] |
|
-
|
Likely pathogenic |
Ornithine carbamoyltransferase deficiency [MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664] |
|
-
|
Pathogenic |
Brody myopathy [MONDO:MONDO:0010977,MedGen:C1832918,OMIM:601003,Orphanet:53347] |
|
-
|
Likely pathogenic |
Neural tube defects, folate-sensitive [MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
-
|
Likely pathogenic |
Ethylmalonic encephalopathy [MONDO:MONDO:0011229,MedGen:C1865349,OMIM:602473,Orphanet:51188] |
|
-
|
LP/P |
Segawa syndrome autosomal recessive (ARSEGS) [MIM:605407] |
|
-
|
Likely pathogenic |
Autosomal recessive DOPA responsive dystonia [MONDO:MONDO:0011551,MedGen:C2673535,OMIM:605407,Orphanet:101150] |
|
-
|
LP/P |
Nonaka myopathy (NM) [MIM:605820] |
|
-
|
LP/P |
Diabetes mellitus, permanent neonatal, 1 (PNDM1) [MIM:606176] |
|
-
|
Likely pathogenic |
Maturity onset diabetes mellitus in young [Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
-
|
LP/P |
Mucopolysaccharidosis 1H (MPS1H) [MIM:607014] |
|
-
|
LP/P |
Mucopolysaccharidosis 1S (MPS1S) [MIM:607016] |
|
-
|
Pathogenic |
Spondyloenchondrodysplasia with immune dysregulation [MONDO:MONDO:0011939,MedGen:C1842763,OMIM:607944,Orphanet:1855] |
|
-
|
Likely pathogenic |
DPAGT1-congenital disorder of glycosylation [MONDO:MONDO:0011964,MedGen:C2931004,OMIM:608093,Orphanet:86309] |
|
-
|
LP/P |
Leber congenital amaurosis 9 (LCA9) [MIM:608553] |
|
-
|
Pathogenic |
Leber congenital amaurosis 9 [MONDO:MONDO:0012056,MedGen:C1837873,OMIM:608553,Orphanet:65] |
|
-
|
Pathogenic/Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
-
|
LP/P |
Noonan syndrome 3 (NS3) [MIM:609942] |
|
-
|
Likely pathogenic |
Noonan syndrome 3 [MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648] |
|
-
|
LP/P |
Retinitis pigmentosa 33 (RP33) [MIM:610359] |
|
-
|
LP/P |
Myasthenic syndrome, congenital, 12 (CMS12) [MIM:610542] |
|
-
|
LP/P |
Phosphoserine aminotransferase deficiency (PSATD) [MIM:610992] |
|
-
|
Pathogenic |
Aortic aneurysm, familial thoracic 6 [MONDO:MONDO:0012730,MedGen:C2673186,OMIM:611788] |
|
-
|
Pathogenic |
Hypomyelinating leukodystrophy 6 [MONDO:MONDO:0012905,MedGen:C2676244,OMIM:612438,Orphanet:139441] |
|
-
|
Pathogenic |
Arginine:glycine amidinotransferase deficiency [MONDO:MONDO:0012996,MedGen:C2675179,OMIM:612718,Orphanet:35704] |
|
-
|
LP/P |
Cerebral creatine deficiency syndrome 2 (CCDS2) [MIM:612736] |
|
-
|
Pathogenic |
Glycogen storage disease due to lactate dehydrogenase M-subunit deficiency [MONDO:MONDO:0013047,MedGen:C2931743,OMIM:612933,Orphanet:284426] |
|
-
|
US |
Spastic paraplegia 45, autosomal recessive (SPG45) [MIM:613162] |
|
-
|
Pathogenic |
Gamma-aminobutyric acid transaminase deficiency [MONDO:MONDO:0013166,MedGen:C0342708,OMIM:613163,Orphanet:2066] |
|
-
|
Likely pathogenic |
Purine-nucleoside phosphorylase deficiency [MONDO:MONDO:0013171,MedGen:C0268125,OMIM:613179,Orphanet:760] |
|
-
|
Likely pathogenic |
Primary hyperoxaluria type 3 [MONDO:MONDO:0013327,MedGen:C3150878,OMIM:613616,Orphanet:416,Orphanet:93600] |
|
-
|
Pathogenic |
Hypermethioninemia with deficiency of S-adenosylhomocysteine hydrolase [MONDO:MONDO:0013404,MedGen:C3151058,OMIM:613752,Orphanet:88618] |
|
-
|
Pathogenic |
Heme oxygenase 1 deficiency [MONDO:MONDO:0013536,MedGen:C1841651,OMIM:614034,Orphanet:562509] |
|
-
|
Likely pathogenic |
Adenosine kinase deficiency [MONDO:MONDO:0100255,MedGen:C4706555,OMIM:614300,Orphanet:289290,Orphanet:88616] |
|
-
|
Likely pathogenic |
Encephalopathy, lethal, due to defective mitochondrial peroxisomal fission 1 [MONDO:MONDO:0013726,MedGen:C3280660,OMIM:614388,Orphanet:330050] |
|
-
|
Likely pathogenic |
Childhood encephalopathy due to thiamine pyrophosphokinase deficiency [MONDO:MONDO:0013761,MedGen:C3280866,OMIM:614458,Orphanet:293955] |
|
-
|
Likely pathogenic |
Congenital myasthenic syndrome 13 [MONDO:MONDO:0013883,MedGen:C3553645,OMIM:614750,Orphanet:353327,Orphanet:590] |
|
-
|
LP/P |
Interstitial nephritis, karyomegalic (KMIN) [MIM:614817] |
|
-
|
LP/P |
Congenital disorder of glycosylation 1T (CDG1T) [MIM:614921] |
|
-
|
LP/P |
Microphthalmia, isolated, 8 (MCOP8) [MIM:615113] |
|
-
|
Likely pathogenic |
Isolated microphthalmia 8 [MONDO:MONDO:0014050,MedGen:C3554524,OMIM:615113,Orphanet:2542] |
|
-
|
Likely pathogenic |
Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
-
|
Likely pathogenic |
Complex cortical dysplasia with other brain malformations 4 [MONDO:MONDO:0014171,MedGen:C3809420,OMIM:615412] |
|
-
|
LP/P |
Neu-Laxova syndrome 2 (NLS2) [MIM:616038] |
|
-
|
Likely pathogenic |
Developmental and epileptic encephalopathy, 31 [MONDO:MONDO:0014598,MedGen:C4225357,OMIM:616346,Orphanet:2382] |
|
-
|
Pathogenic |
Cutis laxa, autosomal dominant 3 [MONDO:MONDO:0014706,MedGen:C4225268,OMIM:616603,Orphanet:90348]; Autosomal dominant spastic paraplegia type 9 [MONDO:MONDO:0015091,MedGen:C1832669]; de Barsy syndrome [MONDO:MONDO:0017569,MedGen:C0268354,Orphanet:2962] |
|
-
|
Likely pathogenic |
Childhood Onset VCP-related Neurodevelopmental Disorder|Charcot-Marie-Tooth disease type 2Y [|MONDO:MONDO:0014735,MedGen:C5569026,OMIM:616687,Orphanet:435387]; Inclusion body myopathy with Paget disease of bone and frontotemporal dementia type 1 [MONDO:MONDO:0008178,MedGen:C4551951,OMIM:167320]; Frontotemporal dementia and/or amyotrophic lateral sclerosis 6 [MONDO:MONDO:0013501,MedGen:C5436279,OMIM:613954,Orphanet:275872,Orphanet:803] |
|
-
|
Likely pathogenic |
Anterior segment dysgenesis 6 [MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
-
|
LP/P |
Epileptic encephalopathy, infantile or early childhood, 1 (IECEE1) [MIM:617711] |
|
-
|
Pathogenic |
Intellectual disability, autosomal dominant 48 [MONDO:MONDO:0030913,MedGen:C4540321,OMIM:617751,Orphanet:500159] |
|
-
|
Likely pathogenic |
Intellectual disability, autosomal dominant 51 [MONDO:MONDO:0030917,MedGen:C4540474,OMIM:617788] |
|
-
|
Pathogenic |
Intellectual disability, autosomal dominant 52 [MONDO:MONDO:0030918,MedGen:C4540478,OMIM:617796] |
|
-
|
LP/P |
Noonan syndrome 11 (NS11) [MIM:618499] |
|
-
|
Likely pathogenic |
Neurodevelopmental disorder with structural brain anomalies and dysmorphic facies [MONDO:MONDO:0032820,MedGen:C5231416,OMIM:618577] |
|
-
|
LP/P |
Developmental and epileptic encephalopathy 84 (DEE84) [MIM:618792] |
|
-
|
Likely pathogenic |
Vertebral, cardiac, renal, and limb defects syndrome 3 [MONDO:MONDO:0030077,MedGen:C5394250,OMIM:618845] |
|
-
|
Likely pathogenic |
Neuronopathy, distal hereditary motor, autosomal recessive 8 [MONDO:MONDO:0030055,MedGen:C5394466,OMIM:618912] |
|
-
|
US |
Neurodevelopmental disorder with cardiomyopathy, spasticity, and brain abnormalities (NEDCASB) [MIM:619121] |
|
-
|
Likely pathogenic |
Developmental and epileptic encephalopathy 89 [MONDO:MONDO:0030856,MedGen:C5436853,OMIM:619124] |
|
-
|
LP/P |
Rauch-Steindl syndrome (RAUST) [MIM:619695] |
|
-
|
Likely pathogenic |
Intellectual developmental disorder with or without peripheral neuropathy [MONDO:MONDO:0859240,MedGen:C5676969,OMIM:619844] |
|
-
|
LP/P |
Neurodevelopmental disorder with hypotonia, impaired speech, and behavioral abnormalities (NEDHISB) [MIM:619854] |
|
-
|
Likely pathogenic |
Neurodevelopmental disorder with hypotonia, impaired speech, and behavioral abnormalities [MONDO:MONDO:0859243,MedGen:C5676975,OMIM:619854] |
|
-
|
LP/P |
Diaphragmatic hernia 4, with cardiovascular defects (DIH4) [MIM:620025] |
|
-
|
Pathogenic |
Diaphragmatic hernia 4, with cardiovascular defects [MONDO:MONDO:0859571,MedGen:C5774210,OMIM:620025] |
|
-
|
US |
Dyskeratosis congenita, digenic (DKCD) [MIM:620040] |
|
-
|
Pathogenic |
Mitochondrial complex V (ATP synthase) deficiency, nuclear type 4A [MONDO:MONDO:0957254,MedGen:C5830480,OMIM:620358] |
|
-
|
Pathogenic |
Combined low LDL and fibrinogen [MONDO:MONDO:0957260,MedGen:C5830484,OMIM:620364] |
|
-
|
LP/P |
Muscular dystrophy, limb-girdle, autosomal recessive 28 (LGMDR28) [MIM:620375] |
|
-
|
Pathogenic |
Muscular dystrophy, limb-girdle, autosomal recessive 28 [MONDO:MONDO:0957270,MedGen:C5830518,OMIM:620375] |
|
-
|
Likely pathogenic |
Anterior segment dysgenesis [Human Phenotype Ontology:HP:0007696,Human Phenotype Ontology:HP:0007699,Human Phenotype Ontology:HP:0007700,Human Phenotype Ontology:HP:0008040,MONDO:MONDO:0019503,MedGen:C1862839,OMIM:PS107250,Orphanet:88632] |
|
-
|
Likely pathogenic |
Congenital myopathy [MONDO:MONDO:0019952,MedGen:C0270960,OMIM:PS117000,Orphanet:97245] |
|
-
|
Pathogenic |
Familial hemiplegic migraine [MONDO:MONDO:0000700,MedGen:C0338484,OMIM:PS141500] |
|
-
|
Likely pathogenic |
Anemia|Noonan syndrome [Human Phenotype Ontology:HP:0001903,Human Phenotype Ontology:HP:0001926,Human Phenotype Ontology:HP:0003136,Human Phenotype Ontology:HP:0005509,MONDO:MONDO:0002280,MedGen:C0002871|MONDO:MONDO:0018997,MeSH:D009634,MedGen:C0028326,OMIM:PS163950,Orphanet:648] |
|
-
|
Likely pathogenic |
Galactosemia [Human Phenotype Ontology:HP:0004919,MONDO:MONDO:0018116,MedGen:C0016952,OMIM:PS230400,Orphanet:352] |
|
-
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
-
|
Pathogenic |
Centromeric instability of chromosomes 1,9 and 16 and immunodeficiency [MONDO:MONDO:0000133,MedGen:C0398788,OMIM:PS242860,Orphanet:2268] |
|
-
|
Likely pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
-
|
Likely pathogenic |
Cerebral creatine deficiency syndrome|Deficiency of guanidinoacetate methyltransferase [MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172|MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382] |
|
.
|
- |
- |
|
rs1000091588
|
Pathogenic |
Autosomal recessive distal spinal muscular atrophy 1|Charcot-Marie-Tooth disease|Distal spinal muscular atrophy|Autosomal recessive distal spinal muscular atrophy 1 [MONDO:MONDO:0011436,MedGen:C1858517,OMIM:604320,Orphanet:98920|MONDO:MONDO:0015626,MedGen:C0007959,OMIM:PS118220,Orphanet:166|MONDO:MONDO:0018894,MedGen:C0393541,Orphanet:53739|MONDO:MONDO:0011436,MedGen:C1858517,OMIM:604320,Orphanet:98920]; Charcot-Marie-Tooth disease axonal type 2S [MONDO:MONDO:0014511,MedGen:C4015349,OMIM:616155,Orphanet:443073] |
|
rs1000661676
|
- |
- |
|
rs1009899437
|
- |
- |
|
rs1011631903
|
Pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs1011808569
|
- |
- |
|
rs1013330593
|
- |
- |
|
rs1014048269
|
- |
- |
|
rs1014551540
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs1016829826
|
- |
- |
|
rs1018160528
|
- |
- |
|
rs1018203291
|
- |
- |
|
rs1018955701
|
- |
- |
|
rs1019608054
|
- |
- |
|
rs1025180934
|
- |
- |
|
rs1025180934
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1035500320
|
- |
- |
|
rs1035500320
|
Likely pathogenic |
Adenylosuccinate lyase deficiency [MONDO:MONDO:0007068,MedGen:C0268126,OMIM:103050,Orphanet:46] |
|
rs1036185928
|
Pathogenic |
not provided|Adenylosuccinate lyase deficiency [MedGen:C3661900|MONDO:MONDO:0007068,MedGen:C0268126,OMIM:103050,Orphanet:46] |
|
rs1037467160
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1040177874
|
- |
- |
|
rs1040238997
|
- |
- |
|
rs1040271400
|
- |
- |
|
rs1040881767
|
Likely pathogenic |
3-methylglutaconic aciduria type 1 [MONDO:MONDO:0009610,MedGen:C0342727,OMIM:250950,Orphanet:67046] |
|
rs1041969
|
LB/B |
- |
|
rs1041988
|
LB/B |
- |
|
rs1046009538
|
- |
- |
|
rs1046611742
|
US |
A sporadic cancer |
|
rs1048119191
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs104886492
|
US |
HSD10 mitochondrial disease (HSD10MD) [MIM:300438] |
|
rs104893628
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs104893631
|
LP/P |
Mitochondrial DNA depletion syndrome 3 (MTDPS3) [MIM:251880] |
|
rs104893632
|
LP/P |
Mitochondrial DNA depletion syndrome 3 (MTDPS3) [MIM:251880] |
|
rs104893633
|
Pathogenic |
Mitochondrial DNA depletion syndrome 3 (hepatocerebral type) [MONDO:MONDO:0009636,MedGen:C5191055,OMIM:251880,Orphanet:279934] |
|
rs104893643
|
LP/P |
Fructosuria (FRUCT) [MIM:229800] |
|
rs104893644
|
LP/P |
Fructosuria (FRUCT) [MIM:229800] |
|
rs104893943
|
LP/P |
Argininemia (ARGIN) [MIM:207800] |
|
rs104893947
|
- |
- |
|
rs104893947
|
Pathogenic |
Arginase deficiency|not provided [MONDO:MONDO:0008814,MedGen:C0268548,OMIM:207800,Orphanet:90|MedGen:C3661900] |
|
rs104893950
|
Pathogenic |
Lafora disease|not provided|Progressive myoclonic epilepsy|Inborn genetic diseases [MONDO:MONDO:0009697,MedGen:C0751783,OMIM:254780,OMIM:PS254780,Orphanet:501|MedGen:C3661900|MONDO:MONDO:0020074,MedGen:C0751778,OMIM:PS254800,Orphanet:308,Orphanet:98261|MeSH:D030342,MedGen:C0950123] |
|
rs104894003
|
Pathogenic |
Developmental malformations-deafness-dystonia syndrome|Baraitser-Winter syndrome 1|Inborn genetic diseases|not provided|ACTB-related BAFopathy [MONDO:MONDO:0011823,MedGen:C1846331,OMIM:607371,Orphanet:79107|MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995|MeSH:D030342,MedGen:C0950123|MedGen:C3661900|] |
|
rs104894009
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs104894015
|
LP/P |
Hyperinsulinemic hypoglycemia, familial, 3 (HHF3) [MIM:602485] |
|
rs104894025
|
Pathogenic/Likely pathogenic |
Hemolytic anemia due to pyrimidine 5' nucleotidase deficiency|not provided [MONDO:MONDO:0009946,MedGen:C1849507,OMIM:266120,Orphanet:35120|MedGen:C3661900] |
|
rs104894026
|
Pathogenic |
Hemolytic anemia due to pyrimidine 5' nucleotidase deficiency [MONDO:MONDO:0009946,MedGen:C1849507,OMIM:266120,Orphanet:35120] |
|
rs104894027
|
Pathogenic |
Hemolytic anemia due to pyrimidine 5' nucleotidase deficiency [MONDO:MONDO:0009946,MedGen:C1849507,OMIM:266120,Orphanet:35120] |
|
rs104894028
|
Pathogenic |
Hemolytic anemia due to pyrimidine 5' nucleotidase deficiency [MONDO:MONDO:0009946,MedGen:C1849507,OMIM:266120,Orphanet:35120] |
|
rs104894029
|
Pathogenic |
Hemolytic anemia due to pyrimidine 5' nucleotidase deficiency [MONDO:MONDO:0009946,MedGen:C1849507,OMIM:266120,Orphanet:35120] |
|
rs104894035
|
LP/P |
Phosphoserine phosphatase deficiency (PSPHD) [MIM:614023] |
|
rs104894036
|
LP/P |
Phosphoserine phosphatase deficiency (PSPHD) [MIM:614023] |
|
rs104894061
|
Pathogenic |
Deficiency of steroid 11-beta-monooxygenase|not provided|Glucocorticoid-remediable aldosteronism [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795|MedGen:C3661900|MONDO:MONDO:0007080,MedGen:C3838731,OMIM:103900,Orphanet:403]; Deficiency of steroid 11-beta-monooxygenase [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795] |
|
rs104894062
|
Likely pathogenic |
Deficiency of steroid 11-beta-monooxygenase|not provided [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795|MedGen:C3661900] |
|
rs104894066
|
Pathogenic |
Deficiency of steroid 11-beta-monooxygenase [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795] |
|
rs104894068
|
Pathogenic/Likely pathogenic |
Deficiency of steroid 11-beta-monooxygenase|Glucocorticoid-remediable aldosteronism|not provided|Glucocorticoid-remediable aldosteronism [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795|MONDO:MONDO:0007080,MedGen:C3838731,OMIM:103900,Orphanet:403|MedGen:C3661900|MONDO:MONDO:0007080,MedGen:C3838731,OMIM:103900,Orphanet:403]; Deficiency of steroid 11-beta-monooxygenase [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795] |
|
rs104894135
|
LP/P |
Adrenal hyperplasia 5 (AH5) [MIM:202110] |
|
rs104894136
|
Pathogenic |
17-alpha-hydroxylase/17,20-lyase deficiency, combined partial|Breast cancer, susceptibility to|Deficiency of steroid 17-alpha-monooxygenase|not provided [MONDO:MONDO:0800380,MedGen:C4017190|MedGen:C3469522|MONDO:MONDO:0008730,MedGen:C0268285,OMIM:202110,Orphanet:90793|MedGen:C3661900] |
|
rs104894138
|
LP/P |
Adrenal hyperplasia 5 (AH5) [MIM:202110] |
|
rs104894142
|
LP/P |
Adrenal hyperplasia 5 (AH5) [MIM:202110] |
|
rs104894146
|
LP/P |
Adrenal hyperplasia 5 (AH5) [MIM:202110] |
|
rs104894147
|
LP/P |
Adrenal hyperplasia 5 (AH5) [MIM:202110] |
|
rs104894149
|
- |
- |
|
rs104894149
|
LP/P |
Adrenal hyperplasia 5 (AH5) [MIM:202110] |
|
rs104894150
|
- |
- |
|
rs104894153
|
LP/P |
Adrenal hyperplasia 5 (AH5) [MIM:202110] |
|
rs104894154
|
Pathogenic |
17-alpha-hydroxylase/17,20-lyase deficiency, combined complete|Deficiency of steroid 17-alpha-monooxygenase|not provided [MONDO:MONDO:0800379,MedGen:CN042980|MONDO:MONDO:0008730,MedGen:C0268285,OMIM:202110,Orphanet:90793|MedGen:C3661900] |
|
rs104894226
|
LP/P |
Costello syndrome (CSTLO) [MIM:218040] |
|
rs104894226
|
Pathogenic |
Costello syndrome|not provided|Neoplasm of the large intestine|RASopathy|Non-immune hydrops fetalis|Noonan syndrome and Noonan-related syndrome|6 conditions|HRAS-related condition [MONDO:MONDO:0009026,MedGen:C0587248,OMIM:218040,Orphanet:3071|MedGen:C3661900|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391|Human Phenotype Ontology:HP:0001790,MONDO:MONDO:0009369,MedGen:C0455988,OMIM:236750,Orphanet:363999|MONDO:MONDO:0020297,MedGen:C5681679,Orphanet:98733|6 conditions|] |
|
rs104894226
|
Pathogenic |
not provided|Acute myeloid leukemia|Lung adenocarcinoma|Pancreatic adenocarcinoma|Neoplasm of the large intestine|Multiple myeloma|Transitional cell carcinoma of the bladder|Neoplasm of uterine cervix|B-cell chronic lymphocytic leukemia|Hepatocellular carcinoma|Squamous cell lung carcinoma|Squamous cell carcinoma of the skin|Squamous cell carcinoma of the head and neck|Thymoma|Breast neoplasm|Costello syndrome|Gastric adenocarcinoma|Malignant melanoma of skin|Malignant neoplasm of body of uterus|KA-like vemurafenib-induced squamous lesions|Lip and oral cavity carcinoma [MedGen:C3661900|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0100522,MONDO:MONDO:0006456,MeSH:D013945,MedGen:C0040100,Orphanet:99867|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0009026,MedGen:C0587248,OMIM:218040,Orphanet:3071|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MedGen:C0153574||MONDO:MONDO:0023644,MedGen:C0220641] |
|
rs104894227
|
LP/P |
Costello syndrome (CSTLO) [MIM:218040] |
|
rs104894228
|
LP/P |
Schimmelpenning-Feuerstein-Mims syndrome (SFM) [MIM:163200] |
|
rs104894228
|
Pathogenic/Likely pathogenic |
Linear nevus sebaceous syndrome|Nevus sebaceous|NEVUS SPILUS, SOMATIC|Epidermal nevus|Squamous cell lung carcinoma|Hepatocellular carcinoma|Squamous cell carcinoma of the skin|Lung adenocarcinoma|Neoplasm of uterine cervix|SPITZ NEVUS, SOMATIC|Malignant neoplasm of body of uterus|Pancreatic adenocarcinoma|Malignant melanoma of skin|Gastric adenocarcinoma|Transitional cell carcinoma of the bladder|Squamous cell carcinoma of the head and neck|Multiple myeloma|Thyroid tumor|B-cell chronic lymphocytic leukemia|Neoplasm of the large intestine|Breast neoplasm|Acute myeloid leukemia|Lip and oral cavity carcinoma|Non-immune hydrops fetalis|Costello syndrome|Noonan syndrome and Noonan-related syndrome|Epidermolytic nevus|cutaneous-skeletal hypophosphatemia syndrome [Human Phenotype Ontology:HP:0010817,MONDO:MONDO:0008097,MedGen:C4552097,OMIM:163200,Orphanet:2612|Human Phenotype Ontology:HP:0010815,MedGen:C3854181||Human Phenotype Ontology:HP:0010816,MONDO:MONDO:0008093,MedGen:C0334082,OMIM:162900,Orphanet:79414|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873||MedGen:C0153574|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|MONDO:MONDO:0023644,MedGen:C0220641|Human Phenotype Ontology:HP:0001790,MONDO:MONDO:0009369,MedGen:C0455988,OMIM:236750,Orphanet:363999|MONDO:MONDO:0009026,MedGen:C0587248,OMIM:218040,Orphanet:3071|MONDO:MONDO:0020297,MedGen:C5681679,Orphanet:98733|MONDO:MONDO:0044656,MedGen:C1302848,Orphanet:497737|] |
|
rs104894228
|
LP/P |
Costello syndrome (CSTLO) [MIM:218040] |
|
rs104894228
|
Pathogenic |
Costello syndrome|RASopathy|not provided|Lung adenocarcinoma|Multiple myeloma|Thyroid tumor|Breast neoplasm|Squamous cell lung carcinoma|Pancreatic adenocarcinoma|B-cell chronic lymphocytic leukemia|Transitional cell carcinoma of the bladder|Squamous cell carcinoma of the head and neck|Malignant neoplasm of body of uterus|Malignant melanoma of skin|Squamous cell carcinoma of the skin|Acute myeloid leukemia|Neoplasm of the large intestine|Neoplasm of uterine cervix|Gastric adenocarcinoma|Neoplasm|Hepatocellular carcinoma|Noonan syndrome|6 conditions|Noonan syndrome and Noonan-related syndrome|HRAS-related condition [MONDO:MONDO:0009026,MedGen:C0587248,OMIM:218040,Orphanet:3071|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391|MedGen:C3661900|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MedGen:C0153574|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0002664,Human Phenotype Ontology:HP:0003008,Human Phenotype Ontology:HP:0006741,MONDO:MONDO:0005070,MeSH:D009369,MedGen:C0027651|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MONDO:MONDO:0018997,MeSH:D009634,MedGen:C0028326,OMIM:PS163950,Orphanet:648|6 conditions|MONDO:MONDO:0020297,MedGen:C5681679,Orphanet:98733|] |
|
rs104894229
|
LP/P |
Congenital myopathy with excess of muscle spindles (CMEMS) [MIM:218040] |
|
rs104894229
|
Pathogenic |
Costello syndrome|Myopathy, congenital, with excess of muscle spindles|Epidermal nevus with urothelial cancer, somatic|Nevus sebaceous|not provided|RASopathy|Nasopharyngeal neoplasm|Uterine carcinosarcoma|Malignant neoplasm of body of uterus|Malignant melanoma of skin|Lung adenocarcinoma|Pancreatic adenocarcinoma|Acute myeloid leukemia|Breast neoplasm|Thyroid tumor|Gastric adenocarcinoma|Neoplasm of uterine cervix|Squamous cell carcinoma of the head and neck|Transitional cell carcinoma of the bladder|Prostate adenocarcinoma|Ovarian serous cystadenocarcinoma|Papillary renal cell carcinoma, sporadic|Squamous cell carcinoma of the skin|Myelodysplastic syndrome|Adenoid cystic carcinoma|Glioblastoma|Carcinoma of esophagus|Multiple myeloma|Hepatocellular carcinoma|Neoplasm of the large intestine|Wooly hair nevus|Rhabdomyosarcoma|Lip and oral cavity carcinoma|Inborn genetic diseases|Noonan syndrome and Noonan-related syndrome|Cardiovascular phenotype|See cases|HRAS-related condition|Noonan syndrome 1|Epidermal nevus [MONDO:MONDO:0009026,MedGen:C0587248,OMIM:218040,Orphanet:3071|MONDO:MONDO:0800299,MedGen:C1968782|MedGen:C3277679|Human Phenotype Ontology:HP:0010815,MedGen:C3854181|MedGen:C3661900|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391|Human Phenotype Ontology:HP:0100630,MONDO:MONDO:0005375,MeSH:D009303,MedGen:C0027439|MONDO:MONDO:0006485,MedGen:C0280630|MedGen:C0153574|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0005082,MedGen:C0007112|MONDO:MONDO:0006046,MedGen:C0279663|MeSH:C538614,MedGen:C1336078|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|MONDO:MONDO:0004971,MeSH:D003528,MedGen:C0010606|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0019311,MedGen:C0343114,Orphanet:79414|Human Phenotype Ontology:HP:0002859,MONDO:MONDO:0005212,MeSH:D012208,MedGen:C0035412,Orphanet:780|MONDO:MONDO:0023644,MedGen:C0220641|MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0020297,MedGen:C5681679,Orphanet:98733|MedGen:CN230736|||MONDO:MONDO:0008104,MedGen:C4551602,OMIM:163950,Orphanet:648|Human Phenotype Ontology:HP:0010816,MONDO:MONDO:0008093,MedGen:C0334082,OMIM:162900,Orphanet:79414] |
|
rs104894230
|
US |
Bladder carcinoma |
|
rs104894230
|
Pathogenic |
Malignant tumor of urinary bladder|Costello syndrome|Myopathy, congenital, with excess of muscle spindles|Epidermal nevus|not provided|Melanoma|Thyroid tumor|Inborn genetic diseases|HRAS-related condition [MONDO:MONDO:0001187,MedGen:C0005684,OMIM:109800,Orphanet:157980|MONDO:MONDO:0009026,MedGen:C0587248,OMIM:218040,Orphanet:3071|MONDO:MONDO:0800299,MedGen:C1968782|Human Phenotype Ontology:HP:0010816,MONDO:MONDO:0008093,MedGen:C0334082,OMIM:162900,Orphanet:79414|MedGen:C3661900|Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|MeSH:D030342,MedGen:C0950123|] |
|
rs104894230
|
LP/P |
Costello syndrome (CSTLO) [MIM:218040] |
|
rs104894230
|
Pathogenic |
Costello syndrome|not provided|Adenoid cystic carcinoma|Neoplasm of the large intestine|Carcinoma of esophagus|Thyroid tumor|Uterine carcinosarcoma|Papillary renal cell carcinoma, sporadic|Prostate adenocarcinoma|Malignant melanoma of skin|Squamous cell carcinoma of the head and neck|Squamous cell carcinoma of the skin|Breast neoplasm|Acute myeloid leukemia|Malignant neoplasm of body of uterus|Ovarian serous cystadenocarcinoma|Glioblastoma|Transitional cell carcinoma of the bladder|Gastric adenocarcinoma|Neoplasm of uterine cervix|Myelodysplastic syndrome|Nasopharyngeal neoplasm|Multiple myeloma|Lung adenocarcinoma|Hepatocellular carcinoma|Pancreatic adenocarcinoma|Inborn genetic diseases|6 conditions|Rhabdomyosarcoma|Noonan syndrome and Noonan-related syndrome [MONDO:MONDO:0009026,MedGen:C0587248,OMIM:218040,Orphanet:3071|MedGen:C3661900|MONDO:MONDO:0004971,MeSH:D003528,MedGen:C0010606|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|MONDO:MONDO:0006485,MedGen:C0280630|MeSH:C538614,MedGen:C1336078|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|MedGen:C0153574|MONDO:MONDO:0006046,MedGen:C0279663|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0100630,MONDO:MONDO:0005375,MeSH:D009303,MedGen:C0027439|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|MeSH:D030342,MedGen:C0950123|6 conditions|Human Phenotype Ontology:HP:0002859,MONDO:MONDO:0005212,MeSH:D012208,MedGen:C0035412,Orphanet:780|MONDO:MONDO:0020297,MedGen:C5681679,Orphanet:98733] |
|
rs104894230
|
Pathogenic/Likely pathogenic |
Costello syndrome, severe|Nevus sebaceous|Costello syndrome|RASopathy|not provided|Breast neoplasm|Lip and oral cavity carcinoma|Non-immune hydrops fetalis|Noonan syndrome and Noonan-related syndrome [MedGen:C4016398|Human Phenotype Ontology:HP:0010815,MedGen:C3854181|MONDO:MONDO:0009026,MedGen:C0587248,OMIM:218040,Orphanet:3071|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391|MedGen:C3661900|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0023644,MedGen:C0220641|Human Phenotype Ontology:HP:0001790,MONDO:MONDO:0009369,MedGen:C0455988,OMIM:236750,Orphanet:363999|MONDO:MONDO:0020297,MedGen:C5681679,Orphanet:98733] |
|
rs104894231
|
LP/P |
Costello syndrome (CSTLO) [MIM:218040] |
|
rs104894231
|
Pathogenic/Likely pathogenic |
Costello syndrome|Multiple myeloma|Neoplasm of the large intestine|Gastric adenocarcinoma|Acute myeloid leukemia|Neoplasm of uterine cervix|Lung adenocarcinoma [MONDO:MONDO:0009026,MedGen:C0587248,OMIM:218040,Orphanet:3071|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013] |
|
rs104894302
|
Pathogenic |
Paragangliomas 1|Hereditary cancer-predisposing syndrome|Paragangliomas with sensorineural hearing loss [MONDO:MONDO:0008192,MedGen:C3494181,OMIM:168000,Orphanet:29072|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MedGen:C1868633]; Cowden syndrome 3 [MONDO:MONDO:0014045,MedGen:CN166604,Orphanet:201]; Pheochromocytoma [Human Phenotype Ontology:HP:0002666,MONDO:MONDO:0008233,MedGen:C0031511,OMIM:171300,Orphanet:29072]; Carney-Stratakis syndrome [MONDO:MONDO:0011740,MedGen:C1847319,OMIM:606864,Orphanet:97286] |
|
rs104894359
|
LP/P |
Noonan syndrome 3 (NS3) [MIM:609942] |
|
rs104894359
|
LP/P |
Cardiofaciocutaneous syndrome 2 (CFC2) [MIM:615278] |
|
rs104894359
|
Pathogenic |
Cardiofaciocutaneous syndrome 2|RASopathy|not provided|Cardio-facio-cutaneous syndrome|Cardio-facio-cutaneous syndrome [MONDO:MONDO:0014112,MedGen:C3809005,OMIM:615278,Orphanet:1340|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391|MedGen:C3661900|MONDO:MONDO:0015280,MedGen:C1275081,OMIM:PS115150,Orphanet:1340|MONDO:MONDO:0015280,MedGen:C1275081,OMIM:PS115150,Orphanet:1340]; Noonan syndrome|Inborn genetic diseases|Noonan syndrome 3 [MONDO:MONDO:0018997,MeSH:D009634,MedGen:C0028326,OMIM:PS163950,Orphanet:648|MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648] |
|
rs104894364
|
LP/P |
Noonan syndrome 3 (NS3) [MIM:609942] |
|
rs104894364
|
Pathogenic |
Noonan syndrome 3|not provided|Noonan syndrome|RASopathy [MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648|MedGen:C3661900|MONDO:MONDO:0018997,MeSH:D009634,MedGen:C0028326,OMIM:PS163950,Orphanet:648|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391] |
|
rs104894365
|
LP/P |
Noonan syndrome 3 (NS3) [MIM:609942] |
|
rs104894365
|
Pathogenic |
Noonan syndrome 3|Endometrial carcinoma|RASopathy|not provided|Noonan syndrome|Noonan syndrome [MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648|Human Phenotype Ontology:HP:0012114,MONDO:MONDO:0002447,MedGen:C0476089,OMIM:608089|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391|MedGen:C3661900|MONDO:MONDO:0018997,MeSH:D009634,MedGen:C0028326,OMIM:PS163950,Orphanet:648|MONDO:MONDO:0018997,MeSH:D009634,MedGen:C0028326,OMIM:PS163950,Orphanet:648]; Cardio-facio-cutaneous syndrome|Inborn genetic diseases|Noonan syndrome and Noonan-related syndrome [MONDO:MONDO:0015280,MedGen:C1275081,OMIM:PS115150,Orphanet:1340|MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0020297,MedGen:C5681679,Orphanet:98733] |
|
rs104894366
|
LP/P |
Noonan syndrome 3 (NS3) [MIM:609942] |
|
rs104894366
|
LP/P |
Cardiofaciocutaneous syndrome 2 (CFC2) [MIM:615278] |
|
rs104894366
|
Pathogenic/Likely pathogenic |
Cardiofaciocutaneous syndrome 2|Cardio-facio-cutaneous syndrome [MONDO:MONDO:0014112,MedGen:C3809005,OMIM:615278,Orphanet:1340|MONDO:MONDO:0015280,MedGen:C1275081,OMIM:PS115150,Orphanet:1340]; Noonan syndrome|not provided|Acute myeloid leukemia [MONDO:MONDO:0018997,MeSH:D009634,MedGen:C0028326,OMIM:PS163950,Orphanet:648|MedGen:C3661900|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519]; Noonan syndrome 3 [MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648]; Cardiofaciocutaneous syndrome 2 [MONDO:MONDO:0014112,MedGen:C3809005,OMIM:615278,Orphanet:1340]; Autoimmune lymphoproliferative syndrome type 4|RASopathy [MONDO:MONDO:0013767,MedGen:C2674723,OMIM:614470,Orphanet:268114|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391] |
|
rs104894366
|
Pathogenic |
Noonan syndrome|RASopathy|not provided|Noonan syndrome 3|Noonan syndrome 1 [MONDO:MONDO:0018997,MeSH:D009634,MedGen:C0028326,OMIM:PS163950,Orphanet:648|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391|MedGen:C3661900|MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648|MONDO:MONDO:0008104,MedGen:C4551602,OMIM:163950,Orphanet:648] |
|
rs104894367
|
Pathogenic |
Noonan syndrome 3 [MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648] |
|
rs104894451
|
LP/P |
Purine nucleoside phosphorylase deficiency (PNPD) [MIM:613179] |
|
rs104894452
|
LP/P |
Purine nucleoside phosphorylase deficiency (PNPD) [MIM:613179] |
|
rs104894506
|
LP/P |
Adenine phosphoribosyltransferase deficiency (APRTD) [MIM:614723] |
|
rs104894508
|
LP/P |
Adenine phosphoribosyltransferase deficiency (APRTD) [MIM:614723] |
|
rs104894528
|
Pathogenic |
Deficiency of malonyl-CoA decarboxylase|not provided [MONDO:MONDO:0009556,MedGen:C0342793,OMIM:248360,Orphanet:943|MedGen:C3661900] |
|
rs104894550
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs104894551
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs104894553
|
- |
- |
|
rs104894553
|
Pathogenic/Likely pathogenic |
Mild Canavan disease|Spongy degeneration of central nervous system|not provided|Inborn genetic diseases [MONDO:MONDO:0017831,MedGen:C4017127,Orphanet:314918|MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs104894577
|
Pathogenic |
Deficiency of galactokinase [MONDO:MONDO:0009255,MedGen:C0268155,OMIM:230200,Orphanet:352,Orphanet:79237] |
|
rs104894694
|
LP/P |
Cerebral creatine deficiency syndrome 2 (CCDS2) [MIM:612736] |
|
rs104894694
|
Likely pathogenic |
Deficiency of guanidinoacetate methyltransferase|Cerebral creatine deficiency syndrome [MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382|MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172] |
|
rs104894832
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs104894840
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs104894841
|
Pathogenic |
Fabry disease|not provided [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324|MedGen:C3661900] |
|
rs104894845
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs104894979
|
Likely pathogenic |
Glaucoma 3A|Anterior segment dysgenesis 6 [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
rs104895297
|
LP/P |
Hyperimmunoglobulinemia D and periodic fever syndrome (HIDS) [MIM:260920] |
|
rs104895298
|
- |
- |
|
rs104895298
|
LP/P |
Hyperimmunoglobulinemia D and periodic fever syndrome (HIDS) [MIM:260920] |
|
rs104895298
|
Pathogenic |
Hyperimmunoglobulin D with periodic fever|not provided|Hyperimmunoglobulin D with periodic fever [MONDO:MONDO:0009849,MedGen:C0398691,OMIM:260920,Orphanet:343|MedGen:C3661900|MONDO:MONDO:0009849,MedGen:C0398691,OMIM:260920,Orphanet:343]; Mevalonic aciduria [MONDO:MONDO:0012481,MedGen:C1959626,OMIM:610377,Orphanet:29]; Porokeratosis 3, disseminated superficial actinic type [MONDO:MONDO:0008293,MedGen:C1867981,OMIM:175900] |
|
rs104895301
|
LP/P |
Porokeratosis 3, multiple types (POROK3) [MIM:175900] |
|
rs104895301
|
Pathogenic/Likely pathogenic |
Hyperimmunoglobulin D with periodic fever|Mevalonic aciduria|Porokeratosis 3, disseminated superficial actinic type|not provided|Porokeratosis 3, disseminated superficial actinic type [MONDO:MONDO:0009849,MedGen:C0398691,OMIM:260920,Orphanet:343|MONDO:MONDO:0012481,MedGen:C1959626,OMIM:610377,Orphanet:29|MONDO:MONDO:0008293,MedGen:C1867981,OMIM:175900|MedGen:C3661900|MONDO:MONDO:0008293,MedGen:C1867981,OMIM:175900]; Hyperimmunoglobulin D with periodic fever [MONDO:MONDO:0009849,MedGen:C0398691,OMIM:260920,Orphanet:343]; Mevalonic aciduria [MONDO:MONDO:0012481,MedGen:C1959626,OMIM:610377,Orphanet:29] |
|
rs104895314
|
LP/P |
Mevalonic aciduria (MEVA) [MIM:610377] |
|
rs104895317
|
LP/P |
Mevalonic aciduria (MEVA) [MIM:610377] |
|
rs104895317
|
Pathogenic |
Mevalonic aciduria|Hyperimmunoglobulin D with periodic fever|Hyperimmunoglobulin D with periodic fever [MONDO:MONDO:0012481,MedGen:C1959626,OMIM:610377,Orphanet:29|MONDO:MONDO:0009849,MedGen:C0398691,OMIM:260920,Orphanet:343|MONDO:MONDO:0009849,MedGen:C0398691,OMIM:260920,Orphanet:343]; Mevalonic aciduria [MONDO:MONDO:0012481,MedGen:C1959626,OMIM:610377,Orphanet:29]; Porokeratosis 3, disseminated superficial actinic type|not provided [MONDO:MONDO:0008293,MedGen:C1867981,OMIM:175900|MedGen:C3661900] |
|
rs104895332
|
Pathogenic/Likely pathogenic |
Hyperimmunoglobulin D with periodic fever|not provided|Hyperimmunoglobulin D with periodic fever [MONDO:MONDO:0009849,MedGen:C0398691,OMIM:260920,Orphanet:343|MedGen:C3661900|MONDO:MONDO:0009849,MedGen:C0398691,OMIM:260920,Orphanet:343]; Mevalonic aciduria [MONDO:MONDO:0012481,MedGen:C1959626,OMIM:610377,Orphanet:29]; Porokeratosis 3, disseminated superficial actinic type [MONDO:MONDO:0008293,MedGen:C1867981,OMIM:175900] |
|
rs104895336
|
LP/P |
Hyperimmunoglobulinemia D and periodic fever syndrome (HIDS) [MIM:260920] |
|
rs104895363
|
Likely pathogenic |
Hyperimmunoglobulin D with periodic fever|Hyperimmunoglobulin D with periodic fever [MONDO:MONDO:0009849,MedGen:C0398691,OMIM:260920,Orphanet:343|MONDO:MONDO:0009849,MedGen:C0398691,OMIM:260920,Orphanet:343]; Mevalonic aciduria [MONDO:MONDO:0012481,MedGen:C1959626,OMIM:610377,Orphanet:29]; Porokeratosis 3, disseminated superficial actinic type [MONDO:MONDO:0008293,MedGen:C1867981,OMIM:175900] |
|
rs1048994
|
LB/B |
- |
|
rs1049568
|
- |
- |
|
rs1050535872
|
- |
- |
|
rs1050829
|
LB/B |
- |
|
rs1050916
|
LB/B |
- |
|
rs1051931
|
LB/B |
- |
|
rs1052661
|
LB/B |
- |
|
rs1053055422
|
- |
- |
|
rs1054374
|
LB/B |
- |
|
rs1055019947
|
LP/P |
Protoporphyria, erythropoietic, 1 (EPP1) [MIM:177000] |
|
rs1056827
|
- |
- |
|
rs1056892
|
LB/B |
- |
|
rs1057516269
|
Likely pathogenic |
Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs1057516349
|
Pathogenic/Likely pathogenic |
Glycogen storage disease, type V [MONDO:MONDO:0009293,MedGen:C0017924,OMIM:232600,Orphanet:368] |
|
rs1057516374
|
Pathogenic/Likely pathogenic |
GNE myopathy|GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602|MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602]; Sialuria|not provided [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166|MedGen:C3661900] |
|
rs1057516564
|
Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs1057516600
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs1057516671
|
Likely pathogenic |
Dihydropyrimidine dehydrogenase deficiency [MONDO:MONDO:0010130,MedGen:C1959620,OMIM:274270,Orphanet:1675] |
|
rs1057516746
|
Pathogenic/Likely pathogenic |
GNE myopathy|GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602|MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602]; Sialuria [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166] |
|
rs1057516906
|
Pathogenic/Likely pathogenic |
GNE myopathy|GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602|MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602]; Sialuria|not provided [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166|MedGen:C3661900] |
|
rs1057516995
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs1057517145
|
Pathogenic/Likely pathogenic |
Glycogen storage disease, type V [MONDO:MONDO:0009293,MedGen:C0017924,OMIM:232600,Orphanet:368] |
|
rs1057517361
|
Likely pathogenic |
Glycogen storage disease, type V [MONDO:MONDO:0009293,MedGen:C0017924,OMIM:232600,Orphanet:368] |
|
rs1057517829
|
LP/P |
Pseudovaginal perineoscrotal hypospadias (PPSH) [MIM:264600] |
|
rs1057518071
|
Pathogenic |
Baraitser-Winter syndrome 1|not provided [MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995|MedGen:C3661900] |
|
rs1057518493
|
Likely pathogenic |
Actin accumulation myopathy [MONDO:MONDO:0008070,MedGen:C3711389,OMIM:161800,Orphanet:98904] |
|
rs1057518515
|
- |
- |
|
rs1057518915
|
Pathogenic |
Neurodegeneration|Hypoprebetalipoproteinemia, acanthocytosis, retinitis pigmentosa, and pallidal degeneration [Human Phenotype Ontology:HP:0002180,MONDO:MONDO:0005559,MedGen:C0027746|MONDO:MONDO:0011798,MedGen:C1846582,OMIM:607236,Orphanet:157855] |
|
rs1057519286
|
Pathogenic |
Dystonia, childhood-onset, with optic atrophy and basal ganglia abnormalities|Childhood Onset Dystonias [MONDO:MONDO:0015003,MedGen:C4310634,OMIM:617282,Orphanet:508093|MedGen:C0752202]; Optic atrophy|not provided [Human Phenotype Ontology:HP:0000648,Human Phenotype Ontology:HP:0007751,Human Phenotype Ontology:HP:0007855,MONDO:MONDO:0003608,MedGen:C0029124|MedGen:C3661900] |
|
rs1057519361
|
Pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395] |
|
rs1057519430
|
LP/P |
Intellectual developmental disorder, X-linked, syndromic, Snijders Blok type (MRXSSB) [MIM:300958] |
|
rs1057519725
|
LP/P |
Oculoectodermal syndrome (OES) [MIM:600268] |
|
rs1057519736
|
LB/B |
- |
|
rs1057519736
|
Pathogenic; risk factor |
Acute myeloid leukemia|Acute myocardial infarction [Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|MONDO:MONDO:0004781,MedGen:C0155626] |
|
rs1057519742
|
Pathogenic/Likely pathogenic |
Melanoma|Uveal melanoma [Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202|Human Phenotype Ontology:HP:0007716,MONDO:MONDO:0006486,MeSH:C536494,MedGen:C0220633,OMIM:155720,Orphanet:39044] |
|
rs1057519874
|
Likely pathogenic |
Malignant neoplasm of body of uterus|Squamous cell carcinoma of the head and neck|Melanoma|Malignant melanoma of skin|Squamous cell carcinoma of the skin [MedGen:C0153574|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723] |
|
rs1057519904
|
LP/P |
Glioma (GLM) [MIM:137800] |
|
rs1057519904
|
Likely pathogenic |
Brainstem glioma|Squamous cell carcinoma of the head and neck [Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037] |
|
rs1057519905
|
Likely pathogenic |
Brainstem glioma|Squamous cell carcinoma of the head and neck [Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037] |
|
rs1057519906
|
LB/B |
- |
|
rs1057519906
|
LP/P |
Glioma (GLM) [MIM:137800] |
|
rs1057519906
|
Likely pathogenic; risk factor |
Neoplasm of the large intestine|Neoplasm of brain|Brainstem glioma|Acute myeloid leukemia|Hepatocellular carcinoma|Acute myocardial infarction [Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MONDO:MONDO:0004781,MedGen:C0155626] |
|
rs1057519933
|
Pathogenic |
Gastric adenocarcinoma|Neuroblastoma|Squamous cell carcinoma of the head and neck|Malignant neoplasm of body of uterus|Neoplasm of the large intestine|Glioblastoma|Multiple myeloma|Neoplasm of uterine cervix|Lung adenocarcinoma|Neoplasm of brain|Breast neoplasm|Cowden syndrome 5 [Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0003006,Human Phenotype Ontology:HP:0006738,MONDO:MONDO:0005072,MeSH:D009447,MedGen:C0027819,Orphanet:635|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MedGen:C0153574|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0014047,MedGen:C3554518,OMIM:615108,Orphanet:201] |
|
rs1057519935
|
Likely pathogenic |
Neoplasm of uterine cervix|Lung adenocarcinoma|Gastric adenocarcinoma|Breast neoplasm|Squamous cell carcinoma of the head and neck|Multiple myeloma|Glioblastoma|Neoplasm of the large intestine|Neuroblastoma|Neoplasm of brain|Malignant neoplasm of body of uterus [Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0003006,Human Phenotype Ontology:HP:0006738,MONDO:MONDO:0005072,MeSH:D009447,MedGen:C0027819,Orphanet:635|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MedGen:C0153574] |
|
rs1057519948
|
Likely pathogenic |
Malignant neoplasm of body of uterus|Squamous cell carcinoma of the skin|Squamous cell carcinoma of the head and neck|Malignant melanoma of skin [MedGen:C0153574|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779] |
|
rs1057519951
|
Likely pathogenic |
Breast neoplasm|Lung adenocarcinoma|Gastric adenocarcinoma|Squamous cell carcinoma of the head and neck [Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037] |
|
rs1057520384
|
LP/P |
Segawa syndrome autosomal recessive (ARSEGS) [MIM:605407] |
|
rs1057521047
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs1057910
|
- |
- |
|
rs1060499582
|
Pathogenic |
Deficiency of steroid 17-alpha-monooxygenase|not provided [MONDO:MONDO:0008730,MedGen:C0268285,OMIM:202110,Orphanet:90793|MedGen:C3661900] |
|
rs1060503430
|
Likely pathogenic |
Weaver syndrome [MONDO:MONDO:0010193,MedGen:C0265210,OMIM:277590,Orphanet:3447] |
|
rs1060503769
|
Pathogenic |
Carney-Stratakis syndrome [MONDO:MONDO:0011740,MedGen:C1847319,OMIM:606864,Orphanet:97286]; Pheochromocytoma [Human Phenotype Ontology:HP:0002666,MONDO:MONDO:0008233,MedGen:C0031511,OMIM:171300,Orphanet:29072]; Cowden syndrome 3 [MONDO:MONDO:0014045,MedGen:CN166604,Orphanet:201]; Paragangliomas with sensorineural hearing loss|Hereditary cancer-predisposing syndrome [MedGen:C1868633|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] |
|
rs1063554
|
- |
- |
|
rs1064651
|
- |
- |
|
rs1064651
|
LP/P |
Gaucher disease 1 (GD1) [MIM:230800] |
|
rs1064651
|
Pathogenic/Likely pathogenic |
Gaucher disease-ophthalmoplegia-cardiovascular calcification syndrome|Gaucher disease type I|Gaucher disease type II|Gaucher disease type III|Gaucher disease perinatal lethal|Gaucher disease|not provided|7 conditions|Gaucher disease type II [MONDO:MONDO:0009268,MedGen:C1856476,OMIM:231005,Orphanet:2072|MONDO:MONDO:0009265,MedGen:C1961835,OMIM:230800,Orphanet:355,Orphanet:77259|MONDO:MONDO:0009266,MedGen:C0268250,OMIM:230900,Orphanet:77260|MONDO:MONDO:0009267,MedGen:C0268251,OMIM:231000,Orphanet:355,Orphanet:77261|MONDO:MONDO:0011945,MedGen:C1842704,OMIM:608013,Orphanet:85212|MONDO:MONDO:0018150,MedGen:C0017205,Orphanet:355|MedGen:C3661900|7 conditions|MONDO:MONDO:0009266,MedGen:C0268250,OMIM:230900,Orphanet:77260]; Gaucher disease type III [MONDO:MONDO:0009267,MedGen:C0268251,OMIM:231000,Orphanet:355,Orphanet:77261]; Gaucher disease type I [MONDO:MONDO:0009265,MedGen:C1961835,OMIM:230800,Orphanet:355,Orphanet:77259]; Gaucher disease-ophthalmoplegia-cardiovascular calcification syndrome|Parkinson disease, late-onset|Inborn genetic diseases [MONDO:MONDO:0009268,MedGen:C1856476,OMIM:231005,Orphanet:2072|MONDO:MONDO:0008199,MedGen:C3160718,OMIM:168600,Orphanet:411602|MeSH:D030342,MedGen:C0950123] |
|
rs1064792855
|
Likely pathogenic |
Mitochondrial DNA depletion syndrome 1 [MONDO:MONDO:0011283,MedGen:C4551995,OMIM:603041,Orphanet:298] |
|
rs1064792867
|
Pathogenic |
Mitochondrial DNA depletion syndrome 1 [MONDO:MONDO:0011283,MedGen:C4551995,OMIM:603041,Orphanet:298] |
|
rs1064793444
|
Pathogenic/Likely pathogenic |
not provided|ACTB-related BAFopathy|Baraitser-Winter syndrome 1 [MedGen:CN517202||MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995] |
|
rs1064794287
|
Pathogenic/Likely pathogenic |
not provided|Actin accumulation myopathy [MedGen:C3661900|MONDO:MONDO:0008070,MedGen:C3711389,OMIM:161800,Orphanet:98904] |
|
rs1064794574
|
LP/P |
Intellectual developmental disorder, X-linked, syndromic, Snijders Blok type (MRXSSB) [MIM:300958] |
|
rs1064794652
|
Pathogenic/Likely pathogenic |
not provided|Actin accumulation myopathy [MedGen:C3661900|MONDO:MONDO:0008070,MedGen:C3711389,OMIM:161800,Orphanet:98904] |
|
rs1064794680
|
- |
- |
|
rs1064794848
|
LP/P |
Neurodevelopmental disorder with visual defects and brain anomalies (NEDVIBA) [MIM:618547] |
|
rs1064794848
|
Pathogenic/Likely pathogenic |
not provided|Neurodevelopmental disorder with visual defects and brain anomalies|Retinitis pigmentosa|Inborn genetic diseases|Hemolytic anemia due to hexokinase deficiency|Retinitis pigmentosa 79|Autism spectrum disorder [MedGen:C3661900|MONDO:MONDO:0032807,MedGen:C5231404,OMIM:618547|Human Phenotype Ontology:HP:0000547,MONDO:MONDO:0019200,MeSH:D012174,MedGen:C0035334,OMIM:268000,OMIM:PS268000,Orphanet:791|MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0009340,MedGen:C3150343,OMIM:235700,Orphanet:90031|MONDO:MONDO:0044320,MedGen:C4479526,OMIM:617460|MONDO:MONDO:0005258,MeSH:D000067877,MedGen:C1510586,Orphanet:106] |
|
rs1064795154
|
LP/P |
Neurodevelopmental disorder with visual defects and brain anomalies (NEDVIBA) [MIM:618547] |
|
rs1064795334
|
Pathogenic/Likely pathogenic |
not provided|Complex cortical dysplasia with other brain malformations 5 [MedGen:C3661900|MONDO:MONDO:0014337,MedGen:C3810407,OMIM:615763] |
|
rs1064796820
|
Pathogenic |
not provided|Intellectual disability, X-linked 102 [MedGen:CN517202|MONDO:MONDO:0010497,MedGen:C5393299,OMIM:300958,Orphanet:457260] |
|
rs1064796827
|
Pathogenic/Likely pathogenic |
not provided|Intellectual disability, X-linked 102 [MedGen:C3661900|MONDO:MONDO:0010497,MedGen:C5393299,OMIM:300958,Orphanet:457260] |
|
rs111033648
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033652
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033669
|
- |
- |
|
rs111033669
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033715
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033715
|
Pathogenic/Likely pathogenic |
Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase|not provided|Galactosemia [MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239|MedGen:C3661900|Human Phenotype Ontology:HP:0004919,MONDO:MONDO:0018116,MedGen:C0016952,OMIM:PS230400,Orphanet:352] |
|
rs111033720
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033725
|
Pathogenic |
Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase|not provided [MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239|MedGen:C3661900] |
|
rs111033800
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033800
|
Pathogenic/Likely pathogenic |
Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase|not provided|Galactosemia [MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239|MedGen:C3661900|Human Phenotype Ontology:HP:0004919,MONDO:MONDO:0018116,MedGen:C0016952,OMIM:PS230400,Orphanet:352] |
|
rs111033802
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033802
|
Pathogenic/Likely pathogenic |
Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase|Galactosemia [MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239|Human Phenotype Ontology:HP:0004919,MONDO:MONDO:0018116,MedGen:C0016952,OMIM:PS230400,Orphanet:352] |
|
rs111033806
|
Pathogenic |
Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase [MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239] |
|
rs111033808
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033808
|
Pathogenic/Likely pathogenic |
Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase|not provided|Galactosemia [MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239|MedGen:C3661900|Human Phenotype Ontology:HP:0004919,MONDO:MONDO:0018116,MedGen:C0016952,OMIM:PS230400,Orphanet:352] |
|
rs111033809
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033810
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033811
|
Pathogenic/Likely pathogenic |
Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase|not provided|Galactosemia [MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239|MedGen:C3661900|Human Phenotype Ontology:HP:0004919,MONDO:MONDO:0018116,MedGen:C0016952,OMIM:PS230400,Orphanet:352] |
|
rs111033812
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033814
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033815
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033828
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111033832
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs111621042
|
- |
- |
|
rs111863748
|
Likely pathogenic |
Pigmentary pallidal degeneration [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850] |
|
rs112441786
|
- |
- |
|
rs112445441
|
LP/P |
Oculoectodermal syndrome (OES) [MIM:600268] |
|
rs1126673
|
- |
- |
|
rs1128400
|
- |
- |
|
rs1131691007
|
US |
Sporadic cancers |
|
rs1131691065
|
Pathogenic |
Hereditary cancer-predisposing syndrome|Pheochromocytoma [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0002666,MONDO:MONDO:0008233,MedGen:C0031511,OMIM:171300,Orphanet:29072]; Paragangliomas with sensorineural hearing loss [MedGen:C1868633]; Cowden syndrome 3 [MONDO:MONDO:0014045,MedGen:CN166604,Orphanet:201]; Carney-Stratakis syndrome|Mitochondrial complex 2 deficiency, nuclear type 3 [MONDO:MONDO:0011740,MedGen:C1847319,OMIM:606864,Orphanet:97286|MONDO:MONDO:0030937,MedGen:C5436934,OMIM:619167] |
|
rs1131691341
|
Likely pathogenic |
not provided|Baraitser-Winter syndrome 1 [MedGen:CN517202|MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995] |
|
rs1131691416
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1131691416
|
Pathogenic/Likely pathogenic |
not provided|Maturity-onset diabetes of the young type 2|Type 2 diabetes mellitus [MedGen:C3661900|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853]; Hyperinsulinism due to glucokinase deficiency [MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299]; Permanent neonatal diabetes mellitus 1 [MONDO:MONDO:0100165,MedGen:C5393570,OMIM:606176]; Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs1131691696
|
Pathogenic/Likely pathogenic |
not provided|Hypomyelinating leukodystrophy 6|Hypomyelinating leukodystrophy 6 [MedGen:C3661900|MONDO:MONDO:0012905,MedGen:C2676244,OMIM:612438,Orphanet:139441|MONDO:MONDO:0012905,MedGen:C2676244,OMIM:612438,Orphanet:139441]; Torsion dystonia 4 [MONDO:MONDO:0007493,MedGen:C1851943,OMIM:128101,Orphanet:98805] |
|
rs1131691895
|
Pathogenic/Likely pathogenic |
not provided|Complex cortical dysplasia with other brain malformations 1|Brain malformation [MedGen:C3661900|MONDO:MONDO:0013541,MedGen:C3808397,OMIM:614039,Orphanet:300570|MedGen:C0266449,Orphanet:199633]; Congenital fibrosis of extraocular muscles [Human Phenotype Ontology:HP:0001491,MONDO:MONDO:0007614,MedGen:C1302995,OMIM:PS135700,Orphanet:45358] |
|
rs1131692184
|
Likely pathogenic |
Weaver syndrome [MONDO:MONDO:0010193,MedGen:C0265210,OMIM:277590,Orphanet:3447] |
|
rs113173389
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs113351006
|
- |
- |
|
rs1135401758
|
Likely pathogenic |
Complex cortical dysplasia with other brain malformations 7|not provided [MONDO:MONDO:0012399,MedGen:C3552236,OMIM:610031,Orphanet:300573|MedGen:CN517202] |
|
rs1135401776
|
Pathogenic |
Noonan syndrome 3 [MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648] |
|
rs1135640
|
- |
- |
|
rs113576450
|
- |
- |
|
rs113879010
|
Pathogenic/Likely pathogenic |
not provided|Primary hyperoxaluria, type I [MedGen:C3661900|MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs113931914
|
LB/B |
- |
|
rs113993976
|
LP/P |
Glycogen storage disease 6 (GSD6) [MIM:232700] |
|
rs113993977
|
LP/P |
Glycogen storage disease 6 (GSD6) [MIM:232700] |
|
rs113993978
|
Pathogenic |
Glycogen storage disease, type VI|not provided [MONDO:MONDO:0009294,MedGen:C0017925,OMIM:232700,Orphanet:369|MedGen:CN517202] |
|
rs113993979
|
- |
- |
|
rs113993979
|
Pathogenic |
Glycogen storage disease, type VI [MONDO:MONDO:0009294,MedGen:C0017925,OMIM:232700,Orphanet:369] |
|
rs113993980
|
Pathogenic |
Glycogen storage disease, type VI [MONDO:MONDO:0009294,MedGen:C0017925,OMIM:232700,Orphanet:369] |
|
rs113993986
|
Likely pathogenic |
Glycogen storage disease, type VI [MONDO:MONDO:0009294,MedGen:C0017925,OMIM:232700,Orphanet:369] |
|
rs1141811
|
LP/P |
Gaucher disease 1 (GD1) [MIM:230800] |
|
rs114636410
|
- |
- |
|
rs115014558
|
LB/B |
- |
|
rs11509436
|
LB/B |
- |
|
rs11509438
|
LB/B |
- |
|
rs11509439
|
LB/B |
- |
|
rs115222424
|
- |
- |
|
rs115413295
|
- |
- |
|
rs115413295
|
Pathogenic |
Galactosemia 4|not provided [MONDO:MONDO:0030105,MedGen:C5394377,OMIM:618881,Orphanet:570422|MedGen:C3661900] |
|
rs11541962
|
LB/B |
- |
|
rs11541963
|
LB/B |
- |
|
rs11544658
|
LB/B |
- |
|
rs11549976
|
LB/B |
- |
|
rs11553107
|
LB/B |
- |
|
rs11554273
|
Pathogenic |
McCune-Albright syndrome|Sex cord-stromal tumor|Cushing syndrome|Neoplasm of the large intestine|Hepatocellular carcinoma|Neoplasm|Lung adenocarcinoma|Neoplasm of uterine cervix|Squamous cell carcinoma of the head and neck|Pancreatic adenocarcinoma|Malignant melanoma of skin|Breast neoplasm|Adrenal cortex carcinoma|Gastric adenocarcinoma|Pituitary adenoma 3, multiple types|not provided [MONDO:MONDO:0018919,MedGen:C0242292,OMIM:174800,Orphanet:562|MONDO:MONDO:0006055,MedGen:C0206724|MONDO:MONDO:0018912,MedGen:C0010481,Orphanet:189427,Orphanet:553|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0002664,Human Phenotype Ontology:HP:0003008,Human Phenotype Ontology:HP:0006741,MONDO:MONDO:0005070,MeSH:D009369,MedGen:C0027651|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0054665,MedGen:C4540135,OMIM:617686|MedGen:C3661900] |
|
rs11554290
|
Pathogenic |
Thyroid cancer, nonmedullary, 2|Epidermal nevus|Non-small cell lung carcinoma|Large congenital melanocytic nevus|Neurocutaneous melanocytosis|Linear nevus sebaceous syndrome|not provided|Adrenal cortex carcinoma|Ovarian serous cystadenocarcinoma|Malignant melanoma of skin|Nasopharyngeal neoplasm|B-cell chronic lymphocytic leukemia|Papillary renal cell carcinoma type 1|Neoplasm of the large intestine|Melanoma|Glioblastoma|Transitional cell carcinoma of the bladder|Neoplasm of brain|Lung adenocarcinoma|Malignant neoplasm of body of uterus|Multiple myeloma|Gastric adenocarcinoma|Hepatocellular carcinoma|Acute myeloid leukemia [MONDO:MONDO:0008566,MedGen:C4225426,OMIM:188470|Human Phenotype Ontology:HP:0010816,MONDO:MONDO:0008093,MedGen:C0334082,OMIM:162900,Orphanet:79414|Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|Human Phenotype Ontology:HP:0005600,Human Phenotype Ontology:HP:0005604,MONDO:MONDO:0044792,MedGen:C1842036,OMIM:137550,Orphanet:626|MONDO:MONDO:0009578,MedGen:C0544862,OMIM:249400,Orphanet:2481|Human Phenotype Ontology:HP:0010817,MONDO:MONDO:0008097,MedGen:C4552097,OMIM:163200,Orphanet:2612|MedGen:C3661900|Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0100630,MONDO:MONDO:0005375,MeSH:D009303,MedGen:C0027439|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MedGen:C0153574|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519] |
|
rs11554290
|
Pathogenic |
not provided|Malignant neoplasm of body of uterus|Malignant melanoma of skin|Melanoma|Papillary renal cell carcinoma type 1|Adrenal cortex carcinoma|Multiple myeloma|Gastric adenocarcinoma|Neoplasm of brain|Acute myeloid leukemia|Nasopharyngeal neoplasm|Non-small cell lung carcinoma|Neoplasm of the large intestine|Glioblastoma|Hepatocellular carcinoma|Ovarian serous cystadenocarcinoma|Lung adenocarcinoma|B-cell chronic lymphocytic leukemia|Transitional cell carcinoma of the bladder|Thyroid tumor|Noonan syndrome 6 [MedGen:C3661900|MedGen:C0153574|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0100630,MONDO:MONDO:0005375,MeSH:D009303,MedGen:C0027439|Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|MONDO:MONDO:0013186,MedGen:C2750732,OMIM:613224,Orphanet:648] |
|
rs115638369
|
- |
- |
|
rs11569705
|
LB/B |
- |
|
rs1158027383
|
- |
- |
|
rs1159245188
|
- |
- |
|
rs11614976
|
LB/B |
- |
|
rs1165052640
|
Pathogenic/Likely pathogenic |
not provided|Familial hemiplegic migraine [MedGen:C3661900|MONDO:MONDO:0000700,MedGen:C0338484,OMIM:PS141500] |
|
rs1166067966
|
- |
- |
|
rs1166093458
|
- |
- |
|
rs1166271142
|
Pathogenic/Likely pathogenic |
Congenital microcephaly - severe encephalopathy - progressive cerebral atrophy syndrome|not provided [MONDO:MONDO:0014258,MedGen:C3809971,OMIM:615574,Orphanet:391376|MedGen:C3661900] |
|
rs1166405013
|
- |
- |
|
rs1166600686
|
- |
- |
|
rs11666105
|
- |
- |
|
rs1167329263
|
- |
- |
|
rs1167329263
|
LP/P |
Pyruvate kinase deficiency of red cells (PKRD) [MIM:266200] |
|
rs1167433865
|
- |
- |
|
rs1168600424
|
- |
- |
|
rs1170128038
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs1170817007
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1170892326
|
- |
- |
|
rs117111102
|
- |
- |
|
rs117195882
|
- |
- |
|
rs117225217
|
- |
- |
|
rs1172971002
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I|Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147|MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
rs1173000590
|
Pathogenic |
not provided|Deficiency of steroid 17-alpha-monooxygenase [MedGen:C3661900|MONDO:MONDO:0008730,MedGen:C0268285,OMIM:202110,Orphanet:90793] |
|
rs1176072053
|
- |
- |
|
rs1177201180
|
US |
Cystic fibrosis (CF) [MIM:219700] |
|
rs1178161506
|
- |
- |
|
rs1178427226
|
Pathogenic/Likely pathogenic |
Autosomal recessive distal spinal muscular atrophy 1 [MONDO:MONDO:0011436,MedGen:C1858517,OMIM:604320,Orphanet:98920]; Charcot-Marie-Tooth disease axonal type 2S|Autosomal recessive distal spinal muscular atrophy 1 [MONDO:MONDO:0014511,MedGen:C4015349,OMIM:616155,Orphanet:443073|MONDO:MONDO:0011436,MedGen:C1858517,OMIM:604320,Orphanet:98920] |
|
rs1180276212
|
- |
- |
|
rs118203757
|
- |
- |
|
rs118203916
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
rs118203925
|
LP/P |
Non-phenylketonuria hyperphenylalaninemia (Non-PKU HPA) [MIM:261600] |
|
rs118203933
|
- |
- |
|
rs118203933
|
LP/P |
Osteopetrosis, autosomal recessive 3 (OPTB3) [MIM:259730] |
|
rs118203982
|
Pathogenic |
Succinate-semialdehyde dehydrogenase deficiency|not provided [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22|MedGen:C3661900] |
|
rs118204001
|
Likely pathogenic |
Hepatic methionine adenosyltransferase deficiency [MONDO:MONDO:0009607,MedGen:C0268621,OMIM:250850,Orphanet:168598] |
|
rs118204005
|
Pathogenic |
Hepatic methionine adenosyltransferase deficiency [MONDO:MONDO:0009607,MedGen:C0268621,OMIM:250850,Orphanet:168598] |
|
rs118204083
|
LP/P |
Pyruvate kinase deficiency of red cells (PKRD) [MIM:266200] |
|
rs118204089
|
Pathogenic |
Pyruvate kinase deficiency of red cells [MONDO:MONDO:0009950,MedGen:C0340968,OMIM:266200,Orphanet:766] |
|
rs118204090
|
Pathogenic |
Acyl-CoA oxidase deficiency [MONDO:MONDO:0009919,MedGen:C1849678,OMIM:264470,Orphanet:2971] |
|
rs118204091
|
- |
- |
|
rs118204091
|
Pathogenic |
Acyl-CoA oxidase deficiency [MONDO:MONDO:0009919,MedGen:C1849678,OMIM:264470,Orphanet:2971] |
|
rs118204092
|
Pathogenic |
Acyl-CoA oxidase deficiency [MONDO:MONDO:0009919,MedGen:C1849678,OMIM:264470,Orphanet:2971] |
|
rs1182635980
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs1182635980
|
Pathogenic/Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|Neural tube defects, folate-sensitive [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
rs1183750325
|
- |
- |
|
rs1183869568
|
Pathogenic |
not provided|Fabry disease [MedGen:C3661900|Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs1184088336
|
- |
- |
|
rs1184088336
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1184952683
|
- |
- |
|
rs119103260
|
Likely pathogenic |
Glycogen storage disease, type V [MONDO:MONDO:0009293,MedGen:C0017924,OMIM:232600,Orphanet:368] |
|
rs1191141364
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs1192320601
|
Likely pathogenic |
Spongy degeneration of central nervous system [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141] |
|
rs1192325470
|
- |
- |
|
rs1192977984
|
Likely pathogenic |
Baraitser-winter syndrome 2 [MONDO:MONDO:0013812,MedGen:C3281235,OMIM:614583,Orphanet:2995]; Autosomal dominant nonsyndromic hearing loss 20 [MONDO:MONDO:0011480,MedGen:C1858172,OMIM:604717,Orphanet:90635] |
|
rs1193030161
|
Pathogenic |
Tyrosinemia type I [MONDO:MONDO:0010161,MedGen:C0268490,OMIM:276700,Orphanet:882] |
|
rs1193034540
|
- |
- |
|
rs1193344118
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs1193356896
|
- |
- |
|
rs119482081
|
LP/P |
Neuropathy, hereditary sensory and autonomic, 1A (HSAN1A) [MIM:162400] |
|
rs119482082
|
LP/P |
Neuropathy, hereditary sensory and autonomic, 1A (HSAN1A) [MIM:162400] |
|
rs1200476864
|
- |
- |
|
rs120074140
|
LP/P |
3-ketothiolase deficiency (3KTD) [MIM:203750] |
|
rs120074141
|
LP/P |
3-ketothiolase deficiency (3KTD) [MIM:203750] |
|
rs120074144
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase|not provided [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134|MedGen:C3661900] |
|
rs120074145
|
LP/P |
3-ketothiolase deficiency (3KTD) [MIM:203750] |
|
rs120074146
|
- |
- |
|
rs120074146
|
LP/P |
3-ketothiolase deficiency (3KTD) [MIM:203750] |
|
rs120074147
|
- |
- |
|
rs120074147
|
LP/P |
3-ketothiolase deficiency (3KTD) [MIM:203750] |
|
rs120074176
|
- |
- |
|
rs1200905118
|
- |
- |
|
rs1202306773
|
- |
- |
|
rs1202306773
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1202368985
|
- |
- |
|
rs1205037339
|
- |
- |
|
rs1206608117
|
- |
- |
|
rs1207708075
|
- |
- |
|
rs1209280928
|
Likely pathogenic |
Severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-negative, NK cell-negative, due to adenosine deaminase deficiency [MONDO:MONDO:0007064,MedGen:C1863236,OMIM:102700,Orphanet:277] |
|
rs1209918450
|
- |
- |
|
rs1210644702
|
- |
- |
|
rs1212037891
|
- |
- |
|
rs1212623980
|
Pathogenic/Likely pathogenic |
GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602] |
|
rs1212627309
|
- |
- |
|
rs1213234644
|
- |
- |
|
rs1213395414
|
- |
- |
|
rs121434244
|
LP/P |
Pseudovaginal perineoscrotal hypospadias (PPSH) [MIM:264600] |
|
rs121434245
|
LP/P |
Pseudovaginal perineoscrotal hypospadias (PPSH) [MIM:264600] |
|
rs121434246
|
LP/P |
Pseudovaginal perineoscrotal hypospadias (PPSH) [MIM:264600] |
|
rs121434249
|
LP/P |
Pseudovaginal perineoscrotal hypospadias (PPSH) [MIM:264600] |
|
rs121434250
|
LP/P |
Pseudovaginal perineoscrotal hypospadias (PPSH) [MIM:264600] |
|
rs121434251
|
LP/P |
Pseudovaginal perineoscrotal hypospadias (PPSH) [MIM:264600] |
|
rs121434252
|
LP/P |
Pseudovaginal perineoscrotal hypospadias (PPSH) [MIM:264600] |
|
rs121434253
|
LP/P |
Pseudovaginal perineoscrotal hypospadias (PPSH) [MIM:264600] |
|
rs121434275
|
LP/P |
Acyl-CoA dehydrogenase medium-chain deficiency (ACADMD) [MIM:201450] |
|
rs121434278
|
- |
- |
|
rs121434278
|
LP/P |
Acyl-CoA dehydrogenase medium-chain deficiency (ACADMD) [MIM:201450] |
|
rs121434279
|
LP/P |
Acyl-CoA dehydrogenase medium-chain deficiency (ACADMD) [MIM:201450] |
|
rs121434281
|
LP/P |
Acyl-CoA dehydrogenase medium-chain deficiency (ACADMD) [MIM:201450] |
|
rs121434283
|
LP/P |
Acyl-CoA dehydrogenase medium-chain deficiency (ACADMD) [MIM:201450] |
|
rs121434295
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs121434295
|
Pathogenic/Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|Schizophrenia [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|Human Phenotype Ontology:HP:0100753,MONDO:MONDO:0005090,MeSH:D012559,MedGen:C0036341,OMIM:181500]; Homocystinuria due to methylene tetrahydrofolate reductase deficiency [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395]; Thrombophilia due to thrombin defect [MONDO:MONDO:0008559,MedGen:C3160733,OMIM:188050]; Neural tube defects, folate-sensitive|Neural tube defects, folate-sensitive [MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
rs121434297
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs121434297
|
Pathogenic/Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|Neural tube defects, folate-sensitive [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
rs121434402
|
Pathogenic |
Charcot-Marie-Tooth disease type 4B1|Charcot-Marie-Tooth disease type 4 [MONDO:MONDO:0011066,MedGen:C1832399,OMIM:601382,Orphanet:99955|MONDO:MONDO:0018995,MedGen:C4082197,Orphanet:64749] |
|
rs121434480
|
LP/P |
Cranioosteoarthropathy (COA) [MIM:259100] |
|
rs121434481
|
LP/P |
Digital clubbing, isolated congenital (DIGC) [MIM:119900] |
|
rs121434534
|
LP/P |
Aromatase deficiency (AROD) [MIM:613546] |
|
rs121434536
|
LP/P |
Aromatase deficiency (AROD) [MIM:613546] |
|
rs121434578
|
Pathogenic |
Gamma-aminobutyric acid transaminase deficiency [MONDO:MONDO:0013166,MedGen:C0342708,OMIM:613163,Orphanet:2066] |
|
rs121434583
|
LP/P |
Cutis laxa, autosomal recessive, 3A (ARCL3A) [MIM:219150] |
|
rs121434595
|
US |
Colorectal cancer |
|
rs121434595
|
Likely pathogenic |
Carcinoma of colon|Large congenital melanocytic nevus|Medulloblastoma|Gastric adenocarcinoma|Transitional cell carcinoma of the bladder|Non-Hodgkin lymphoma|Melanoma|Acute myeloid leukemia|Multiple myeloma|Myelodysplastic syndrome|Neoplasm of the large intestine|Malignant melanoma of skin|Noonan syndrome 6 [MONDO:MONDO:0002032,MedGen:C0699790|Human Phenotype Ontology:HP:0005600,Human Phenotype Ontology:HP:0005604,MONDO:MONDO:0044792,MedGen:C1842036,OMIM:137550,Orphanet:626|Human Phenotype Ontology:HP:0002885,MONDO:MONDO:0007959,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:616|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0012539,MONDO:MONDO:0018908,MedGen:C0024305,Orphanet:547|Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MONDO:MONDO:0013186,MedGen:C2750732,OMIM:613224,Orphanet:648] |
|
rs121434596
|
LP/P |
Leukemia, juvenile myelomonocytic (JMML) [MIM:607785] |
|
rs121434596
|
Pathogenic/Likely pathogenic |
Juvenile myelomonocytic leukemia|Noonan syndrome 6|Autoimmune lymphoproliferative syndrome type 4|not provided|Transitional cell carcinoma of the bladder|Malignant melanoma of skin|Medulloblastoma|Gastric adenocarcinoma|Myelodysplastic syndrome|Melanoma|Multiple myeloma|Neoplasm of the large intestine|Acute myeloid leukemia|Non-Hodgkin lymphoma|Acute megakaryoblastic leukemia in down syndrome [Human Phenotype Ontology:HP:0012209,MONDO:MONDO:0011908,MedGen:C0349639,OMIM:607785,Orphanet:86834|MONDO:MONDO:0013186,MedGen:C2750732,OMIM:613224,Orphanet:648|MONDO:MONDO:0013767,MedGen:C2674723,OMIM:614470,Orphanet:268114|MedGen:CN517202|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0002885,MONDO:MONDO:0007959,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:616|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0012539,MONDO:MONDO:0018908,MedGen:C0024305,Orphanet:547|MONDO:MONDO:0020526,MedGen:CN207426,Orphanet:99887] |
|
rs121434636
|
Pathogenic |
3-methylglutaconic aciduria type 1|not provided [MONDO:MONDO:0009610,MedGen:C0342727,OMIM:250950,Orphanet:67046|MedGen:C3661900] |
|
rs12144752
|
LB/B |
- |
|
rs121907937
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs121907964
|
Pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
rs121908014
|
- |
- |
|
rs121908014
|
LP/P |
Congenital erythropoietic porphyria (CEP) [MIM:263700] |
|
rs121908020
|
LP/P |
Congenital erythropoietic porphyria (CEP) [MIM:263700] |
|
rs121908021
|
LP/P |
Congenital erythropoietic porphyria (CEP) [MIM:263700] |
|
rs121908047
|
LP/P |
Galactosemia 3 (GALAC3) [MIM:230350] |
|
rs121908331
|
Likely pathogenic |
Dimethylglycine dehydrogenase deficiency|not provided [MONDO:MONDO:0011610,MedGen:C1853892,OMIM:605850,Orphanet:243343|MedGen:C3661900] |
|
rs121908520
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908521
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs121908522
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908522
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs121908524
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908524
|
Pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs121908526
|
- |
- |
|
rs121908526
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908527
|
- |
- |
|
rs121908527
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908528
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs121908529
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria|AGXT-related condition [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416|] |
|
rs121908530
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs121908530
|
Pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs121908605
|
LP/P |
Molybdenum cofactor deficiency, complementation group B (MOCODB) [MIM:252160] |
|
rs121908628
|
Pathogenic |
GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602] |
|
rs121908633
|
LP/P |
Nonaka myopathy (NM) [MIM:605820] |
|
rs121908638
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
|
rs121908645
|
Pathogenic/Likely pathogenic |
Citrullinemia type I|Citrullinemia [MONDO:MONDO:0008988,MedGen:C4721769,OMIM:215700,Orphanet:247525|Human Phenotype Ontology:HP:0032397,MONDO:MONDO:0015991,MedGen:C0175683,Orphanet:187] |
|
rs121908714
|
- |
- |
|
rs121908714
|
LP/P |
Severe combined immunodeficiency autosomal recessive T-cell-negative/B-cell-negative/NK-cell-negative due to adenosine deaminase deficiency (ADASCID) [MIM:102700] |
|
rs121908717
|
LP/P |
Severe combined immunodeficiency autosomal recessive T-cell-negative/B-cell-negative/NK-cell-negative due to adenosine deaminase deficiency (ADASCID) [MIM:102700] |
|
rs121908724
|
LP/P |
Severe combined immunodeficiency autosomal recessive T-cell-negative/B-cell-negative/NK-cell-negative due to adenosine deaminase deficiency (ADASCID) [MIM:102700] |
|
rs121908725
|
LP/P |
Severe combined immunodeficiency autosomal recessive T-cell-negative/B-cell-negative/NK-cell-negative due to adenosine deaminase deficiency (ADASCID) [MIM:102700] |
|
rs121908759
|
LP/P |
Congenital bilateral absence of the vas deferens (CBAVD) [MIM:277180] |
|
rs121908805
|
Pathogenic |
Cystic fibrosis|not provided|Obstructive azoospermia|Cystic fibrosis [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586|MedGen:C3661900|Human Phenotype Ontology:HP:0011962,MedGen:C4023106|MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586]; Congenital bilateral aplasia of vas deferens from CFTR mutation|CFTR-related disorders|Bronchiectasis with or without elevated sweat chloride 1 [MONDO:MONDO:0010178,MedGen:C0403814,OMIM:277180,Orphanet:48||MONDO:MONDO:0008887,MedGen:C2749757,OMIM:211400,Orphanet:60033] |
|
rs121908943
|
Likely pathogenic |
Immunodeficiency-centromeric instability-facial anomalies syndrome 1|Centromeric instability of chromosomes 1,9 and 16 and immunodeficiency [MONDO:MONDO:0009454,MedGen:C4551557,OMIM:242860,Orphanet:2268|MONDO:MONDO:0000133,MedGen:C0398788,OMIM:PS242860,Orphanet:2268] |
|
rs121908951
|
LP/P |
Brachyolmia type 4 with mild epiphyseal and metaphyseal changes (BCYM4) [MIM:612847] |
|
rs121909009
|
LP/P |
Cystic fibrosis (CF) [MIM:219700] |
|
rs121909033
|
LP/P |
Cystic fibrosis (CF) [MIM:219700] |
|
rs121909078
|
LP/P |
Charcot-Marie-Tooth disease, axonal, 2B (CMT2B) [MIM:600882] |
|
rs121909081
|
LP/P |
Charcot-Marie-Tooth disease, axonal, 2B (CMT2B) [MIM:600882] |
|
rs121909272
|
LP/P |
Cerebral creatine deficiency syndrome 2 (CCDS2) [MIM:612736] |
|
rs121909272
|
Likely pathogenic |
Deficiency of guanidinoacetate methyltransferase|Cerebral creatine deficiency syndrome [MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382|MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172] |
|
rs121909301
|
LP/P |
Succinyl-CoA:3-oxoacid CoA transferase deficiency (SCOTD) [MIM:245050] |
|
rs121909308
|
LP/P |
Glutathione synthetase deficiency (GSS deficiency) [MIM:266130] |
|
rs121909521
|
Pathogenic |
Actin accumulation myopathy [MONDO:MONDO:0008070,MedGen:C3711389,OMIM:161800,Orphanet:98904] |
|
rs121909521
|
Pathogenic/Likely pathogenic |
not provided|Congenital myopathy 2c, severe infantile, autosomal dominant [MedGen:C3661900|MONDO:MONDO:0859523,MedGen:C5830333,OMIM:620278] |
|
rs121909528
|
Pathogenic |
Actin accumulation myopathy [MONDO:MONDO:0008070,MedGen:C3711389,OMIM:161800,Orphanet:98904] |
|
rs121909533
|
LP/P |
Glycogen storage disease 12 (GSD12) [MIM:611881] |
|
rs121909534
|
LP/P |
Glycogen storage disease 12 (GSD12) [MIM:611881] |
|
rs121909732
|
Pathogenic |
Hyperinsulinism-hyperammonemia syndrome [MONDO:MONDO:0011717,MedGen:C1847555,OMIM:606762,Orphanet:35878] |
|
rs121909734
|
Pathogenic |
Hyperinsulinism-hyperammonemia syndrome [MONDO:MONDO:0011717,MedGen:C1847555,OMIM:606762,Orphanet:35878] |
|
rs121912592
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs121912592
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I|Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147|MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
rs121912596
|
- |
- |
|
rs121912596
|
Pathogenic |
Congenital hyperammonemia, type I|Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147|MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
rs121912707
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Seizure|Pyridoxine-dependent epilepsy caused by ALDH7A1 mutant [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|Human Phenotype Ontology:HP:0001250,Human Phenotype Ontology:HP:0001275,Human Phenotype Ontology:HP:0001303,Human Phenotype Ontology:HP:0002125,Human Phenotype Ontology:HP:0002182,Human Phenotype Ontology:HP:0002279,Human Phenotype Ontology:HP:0002306,Human Phenotype Ontology:HP:0002348,Human Phenotype Ontology:HP:0002391,Human Phenotype Ontology:HP:0002417,Human Phenotype Ontology:HP:0002430,Human Phenotype Ontology:HP:0002431,Human Phenotype Ontology:HP:0002432,Human Phenotype Ontology:HP:0002434,Human Phenotype Ontology:HP:0002437,Human Phenotype Ontology:HP:0002466,Human Phenotype Ontology:HP:0002479,Human Phenotype Ontology:HP:0002794,Human Phenotype Ontology:HP:0006997,Human Phenotype Ontology:HP:0010520,MedGen:C0036572|MONDO:MONDO:0020741,MedGen:CN293409] |
|
rs121912711
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs121912734
|
Pathogenic |
Keratosis follicularis [MONDO:MONDO:0007417,MedGen:C0022595,OMIM:124200,Orphanet:218] |
|
rs121912777
|
- |
- |
|
rs121912777
|
Pathogenic |
DRUG METABOLISM, ALTERED, CES1-RELATED [MedGen:C4748035,OMIM:618057] |
|
rs121913037
|
LP/P |
Mitochondrial DNA depletion syndrome 1, MNGIE type (MTDPS1) [MIM:603041] |
|
rs121913039
|
Pathogenic/Likely pathogenic |
Mitochondrial DNA depletion syndrome 1|not provided [MONDO:MONDO:0011283,MedGen:C4551995,OMIM:603041,Orphanet:298|MedGen:C3661900] |
|
rs121913041
|
Likely pathogenic |
Mitochondrial DNA depletion syndrome 1|not provided [MONDO:MONDO:0011283,MedGen:C4551995,OMIM:603041,Orphanet:298|MedGen:CN517202] |
|
rs121913233
|
US |
Melanoma |
|
rs121913233
|
Likely pathogenic |
Linear nevus sebaceous syndrome|not provided|Thyroid tumor|Neoplasm|Vascular Tumors Including Pyogenic Granuloma|Noonan syndrome and Noonan-related syndrome|Salivary gland neoplasm [Human Phenotype Ontology:HP:0010817,MONDO:MONDO:0008097,MedGen:C4552097,OMIM:163200,Orphanet:2612|MedGen:C3661900|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|Human Phenotype Ontology:HP:0002664,Human Phenotype Ontology:HP:0003008,Human Phenotype Ontology:HP:0006741,MONDO:MONDO:0005070,MeSH:D009369,MedGen:C0027651||MONDO:MONDO:0020297,MedGen:C5681679,Orphanet:98733|Human Phenotype Ontology:HP:0100684,MONDO:MONDO:0021357,MedGen:C0036095] |
|
rs121913233
|
Likely pathogenic |
Transitional cell carcinoma of the bladder|Pancreatic adenocarcinoma|Multiple myeloma|B-cell chronic lymphocytic leukemia|Neoplasm|Neoplasm of the large intestine|Acute myeloid leukemia|Malignant neoplasm of body of uterus|Malignant melanoma of skin|Gastric adenocarcinoma|Squamous cell lung carcinoma|Thyroid tumor|Hepatocellular carcinoma|Lung adenocarcinoma [Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0002664,Human Phenotype Ontology:HP:0003008,Human Phenotype Ontology:HP:0006741,MONDO:MONDO:0005070,MeSH:D009369,MedGen:C0027651|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|MedGen:C0153574|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013] |
|
rs121913236
|
Likely pathogenic |
Neoplasm of the large intestine|Linear nevus sebaceous syndrome [Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0010817,MONDO:MONDO:0008097,MedGen:C4552097,OMIM:163200,Orphanet:2612] |
|
rs121913236
|
LP/P |
Cardiofaciocutaneous syndrome 2 (CFC2) [MIM:615278] |
|
rs121913237
|
LP/P |
Keratinocytic non-epidermolytic nevus (KNEN) [MIM:162900] |
|
rs121913237
|
Pathogenic/Likely pathogenic |
Epidermal nevus|not provided|Juvenile myelomonocytic leukemia|Multiple myeloma|Melanoma|Acute myeloid leukemia|Malignant neoplasm of body of uterus|Myelodysplastic syndrome|Neoplasm of the large intestine|Gastric adenocarcinoma|Non-small cell lung carcinoma|Malignant melanoma of skin|Noonan syndrome 6|Noonan syndrome and Noonan-related syndrome|RASopathy|Autoimmune lymphoproliferative syndrome type 4|NRAS-related condition [Human Phenotype Ontology:HP:0010816,MONDO:MONDO:0008093,MedGen:C0334082,OMIM:162900,Orphanet:79414|MedGen:C3661900|Human Phenotype Ontology:HP:0012209,MONDO:MONDO:0011908,MedGen:C0349639,OMIM:607785,Orphanet:86834|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|MedGen:C0153574|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MONDO:MONDO:0013186,MedGen:C2750732,OMIM:613224,Orphanet:648|MONDO:MONDO:0020297,MedGen:C5681679,Orphanet:98733|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391|MONDO:MONDO:0013767,MedGen:C2674723,OMIM:614470,Orphanet:268114|] |
|
rs121913237
|
Pathogenic/Likely pathogenic |
Noonan syndrome|not provided|Melanoma|Acute myeloid leukemia|Malignant melanoma of skin|Malignant neoplasm of body of uterus|Neoplasm of the large intestine|Multiple myeloma|Gastric adenocarcinoma|Myelodysplastic syndrome|RASopathy [MONDO:MONDO:0018997,MeSH:D009634,MedGen:C0028326,OMIM:PS163950,Orphanet:648|MedGen:C3661900|Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MedGen:C0153574|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391] |
|
rs121913240
|
US |
A colorectal cancer sample |
|
rs121913240
|
Pathogenic |
Non-small cell lung carcinoma|Medullary thyroid carcinoma|Thyroid tumor|Neoplasm of the large intestine|Multiple myeloma [Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|Human Phenotype Ontology:HP:0002865,MONDO:MONDO:0015277,MeSH:C536914,MedGen:C0238462,Orphanet:1332|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443] |
|
rs121913250
|
US |
Leukemia |
|
rs121913250
|
Pathogenic |
not provided|Malignant neoplasm of body of uterus|Neoplasm of the large intestine|Multiple myeloma|Acute myeloid leukemia|Non-small cell lung carcinoma|Malignant melanoma of skin|Melanoma|Gastric adenocarcinoma|Myelodysplastic syndrome|Chronic myelogenous leukemia, BCR-ABL1 positive [MedGen:C3661900|MedGen:C0153574|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0005506,Human Phenotype Ontology:HP:0005544,MONDO:MONDO:0011996,MeSH:D015464,MedGen:C0279543,OMIM:608232,Orphanet:521] |
|
rs121913250
|
Pathogenic |
not provided|Gastric adenocarcinoma|Melanoma|Multiple myeloma|Acute myeloid leukemia|Chronic myelogenous leukemia, BCR-ABL1 positive|Malignant neoplasm of body of uterus|Neoplasm of the large intestine|Myelodysplastic syndrome|Non-small cell lung carcinoma|Malignant melanoma of skin|Increased nuchal translucency|Noonan syndrome 6 [MedGen:C3661900|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0005506,Human Phenotype Ontology:HP:0005544,MONDO:MONDO:0011996,MeSH:D015464,MedGen:C0279543,OMIM:608232,Orphanet:521|MedGen:C0153574|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0010880,MedGen:C4023676|MONDO:MONDO:0013186,MedGen:C2750732,OMIM:613224,Orphanet:648] |
|
rs121913250
|
Pathogenic |
Juvenile myelomonocytic leukemia [Human Phenotype Ontology:HP:0012209,MONDO:MONDO:0011908,MedGen:C0349639,OMIM:607785,Orphanet:86834]; Noonan syndrome|not provided|Melanoma|Malignant melanoma of skin|Multiple myeloma|Malignant neoplasm of body of uterus|Neoplasm of the large intestine|Gastric adenocarcinoma|Acute myeloid leukemia|Non-small cell lung carcinoma|Myelodysplastic syndrome|RASopathy|Noonan syndrome and Noonan-related syndrome [MONDO:MONDO:0018997,MeSH:D009634,MedGen:C0028326,OMIM:PS163950,Orphanet:648|MedGen:C3661900|Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MedGen:C0153574|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391|MONDO:MONDO:0020297,MedGen:C5681679,Orphanet:98733] |
|
rs121913255
|
Pathogenic/Likely pathogenic |
Non-small cell lung carcinoma|Acute myeloid leukemia|Melanoma [Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202] |
|
rs121913492
|
Pathogenic/Likely pathogenic |
Melanoma|Uveal melanoma [Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202|Human Phenotype Ontology:HP:0007716,MONDO:MONDO:0006486,MeSH:C536494,MedGen:C0220633,OMIM:155720,Orphanet:39044] |
|
rs121913492
|
Pathogenic |
Melanoma|Abnormal cardiovascular system morphology|Sturge-Weber syndrome [Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202|Human Phenotype Ontology:HP:0001632,Human Phenotype Ontology:HP:0002564,Human Phenotype Ontology:HP:0002565,Human Phenotype Ontology:HP:0030680,MedGen:C4049796|MONDO:MONDO:0008501,MedGen:C0038505,OMIM:185300,Orphanet:3205] |
|
rs121913494
|
Pathogenic |
Pituitary adenoma 3, multiple types|McCune-Albright syndrome [MONDO:MONDO:0054665,MedGen:C4540135,OMIM:617686|MONDO:MONDO:0018919,MedGen:C0242292,OMIM:174800,Orphanet:562] |
|
rs121913495
|
Pathogenic |
McCune-Albright syndrome|Cushing syndrome|Sex cord-stromal tumor|Pancreatic adenocarcinoma|Squamous cell carcinoma of the head and neck|Neoplasm|Gastric adenocarcinoma|Adrenal cortex carcinoma|Hepatocellular carcinoma|Malignant melanoma of skin|Neoplasm of the large intestine|Neoplasm of uterine cervix|Lung adenocarcinoma|Breast neoplasm|Pituitary adenoma 3, multiple types|not provided|Pseudohypoparathyroidism type I A [MONDO:MONDO:0018919,MedGen:C0242292,OMIM:174800,Orphanet:562|MONDO:MONDO:0018912,MedGen:C0010481,Orphanet:189427,Orphanet:553|MONDO:MONDO:0006055,MedGen:C0206724|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0002664,Human Phenotype Ontology:HP:0003008,Human Phenotype Ontology:HP:0006741,MONDO:MONDO:0005070,MeSH:D009369,MedGen:C0027651|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0054665,MedGen:C4540135,OMIM:617686|MedGen:C3661900|MONDO:MONDO:0007078,MedGen:C3494506,OMIM:103580,Orphanet:79443] |
|
rs121913496
|
Likely pathogenic |
Transitional cell carcinoma of the bladder|Neoplasm|Breast neoplasm|Malignant melanoma of skin|Prostate adenocarcinoma|Squamous cell carcinoma of the head and neck|Thyroid tumor|Lung adenocarcinoma|Squamous cell lung carcinoma|Squamous cell carcinoma of the skin|Noonan syndrome 3 [Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0002664,Human Phenotype Ontology:HP:0003008,Human Phenotype Ontology:HP:0006741,MONDO:MONDO:0005070,MeSH:D009369,MedGen:C0027651|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MONDO:MONDO:0005082,MedGen:C0007112|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648] |
|
rs121913499
|
US |
Colorectal cancer |
|
rs121913499
|
Pathogenic/Likely pathogenic |
Lung adenocarcinoma|Breast neoplasm|Neoplasm of brain|Hepatocellular carcinoma|Astrocytoma|Medulloblastoma|Malignant melanoma of skin|Transitional cell carcinoma of the bladder|Neoplasm of the large intestine|Multiple myeloma|Prostate adenocarcinoma|Brainstem glioma|Glioblastoma|Myelodysplastic syndrome|Acute myeloid leukemia|Adenoid cystic carcinoma|not provided|Enchondromatosis|Enchondromatosis [Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0009592,MONDO:MONDO:0019781,MeSH:D001254,MedGen:C0004114|Human Phenotype Ontology:HP:0002885,MONDO:MONDO:0007959,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:616|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|MONDO:MONDO:0004971,MeSH:D003528,MedGen:C0010606|MedGen:C3661900|Human Phenotype Ontology:HP:0005701,MONDO:MONDO:0008145,MedGen:C0014084,OMIM:166000,Orphanet:296|Human Phenotype Ontology:HP:0005701,MONDO:MONDO:0008145,MedGen:C0014084,OMIM:166000,Orphanet:296]; Maffucci syndrome|Glioma susceptibility 1|Maffucci syndrome [MONDO:MONDO:0013808,MedGen:C0024454,OMIM:614569,Orphanet:163634|MONDO:MONDO:0024498,MedGen:C2750850,OMIM:137800|MONDO:MONDO:0013808,MedGen:C0024454,OMIM:614569,Orphanet:163634] |
|
rs121913500
|
US |
A glioma sample |
|
rs121913500
|
Pathogenic/Likely pathogenic |
Glioblastoma multiforme, somatic|Transitional cell carcinoma of the bladder|Myelodysplastic syndrome|Medulloblastoma|Malignant melanoma of skin|Hepatocellular carcinoma|Lung adenocarcinoma|Brainstem glioma|Breast neoplasm|Prostate adenocarcinoma|Multiple myeloma|Neoplasm of brain|Acute myeloid leukemia|Oligodendroglioma|Adenoid cystic carcinoma|Neoplasm of the large intestine|Astrocytoma|Glioblastoma|Metaphyseal chondromatosis with D-2-hydroxyglutaric aciduria|not provided|Glioma susceptibility 1|Enchondromatosis|Metaphyseal chondromatosis [MedGen:C4016231|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0002885,MONDO:MONDO:0007959,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:616|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0033681,MONDO:MONDO:0016695,MeSH:D009837,MedGen:C0028945,Orphanet:251627|MONDO:MONDO:0004971,MeSH:D003528,MedGen:C0010606|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0009592,MONDO:MONDO:0019781,MeSH:D001254,MedGen:C0004114|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0013941,MedGen:C3553958,OMIM:614875,Orphanet:99646|MedGen:C3661900|MONDO:MONDO:0024498,MedGen:C2750850,OMIM:137800|Human Phenotype Ontology:HP:0005701,MONDO:MONDO:0008145,MedGen:C0014084,OMIM:166000,Orphanet:296|] |
|
rs121913502
|
LP/P |
D-2-hydroxyglutaric aciduria 2 (D2HGA2) [MIM:613657] |
|
rs121913502
|
Pathogenic/Likely pathogenic |
D-2-hydroxyglutaric aciduria 2|Squamous cell carcinoma of the head and neck|not provided|Acute myeloid leukemia|Neoplasm of the large intestine|Myelodysplastic syndrome|Multiple myeloma|Inborn genetic diseases [MONDO:MONDO:0013345,MedGen:C3150909,OMIM:613657,Orphanet:79315|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MedGen:C3661900|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MeSH:D030342,MedGen:C0950123] |
|
rs121913503
|
Pathogenic/Likely pathogenic; risk factor |
Hepatocellular carcinoma|Acute myeloid leukemia|Neoplasm of the large intestine|Neoplasm of brain|Brainstem glioma|Acute myocardial infarction [Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|MONDO:MONDO:0004781,MedGen:C0155626] |
|
rs121913503
|
LP/P |
Glioma (GLM) [MIM:137800] |
|
rs121913503
|
Pathogenic/Likely pathogenic; risk factor |
Acute myeloid leukemia|Hepatocellular carcinoma|Neoplasm of brain|Myelodysplastic syndrome|Neoplasm of the large intestine|Brainstem glioma|Acute myocardial infarction [Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|MONDO:MONDO:0004781,MedGen:C0155626] |
|
rs121913527
|
Pathogenic/Likely pathogenic |
Neoplasm of the large intestine|Multiple myeloma|Autoimmune lymphoproliferative syndrome type 4|RASopathy [Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MONDO:MONDO:0013767,MedGen:C2674723,OMIM:614470,Orphanet:268114|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391] |
|
rs121913527
|
LP/P |
Oculoectodermal syndrome (OES) [MIM:600268] |
|
rs121913528
|
LP/P |
Gastric cancer (GASC) [MIM:613659] |
|
rs121913529
|
US |
Colorectal cancer samples |
|
rs121913529
|
LP/P |
Schimmelpenning-Feuerstein-Mims syndrome (SFM) [MIM:163200] |
|
rs121913529
|
Likely pathogenic |
Neoplasm of the large intestine|Neoplasm of ovary|Lung adenocarcinoma|Gastrointestinal stromal tumor|Multiple myeloma|not provided|Gallbladder cancer|KRAS-related condition|Non-small cell lung carcinoma [Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0100723,MONDO:MONDO:0011719,MeSH:D046152,MedGen:C0238198,OMIM:606764,Orphanet:44890|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MedGen:C3661900|MONDO:MONDO:0005411,MedGen:C0153452||Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131] |
|
rs121913529
|
Pathogenic |
Carcinoma of pancreas|Epidermal nevus|Nevus sebaceous|Linear nevus sebaceous syndrome|Juvenile myelomonocytic leukemia|Autoimmune lymphoproliferative syndrome type 4|Non-small cell lung carcinoma|Neoplasm of ovary|not provided|Lung carcinoma|Neoplasm of the large intestine|Acute myeloid leukemia|Thyroid tumor|RASopathy|Cerebral arteriovenous malformation|Vascular Tumors Including Pyogenic Granuloma|Primary low grade serous adenocarcinoma of ovary|Capillary malformation-arteriovenous malformation 1|Encephalocraniocutaneous lipomatosis|Gastric cancer|Atypical endometrial hyperplasia [MONDO:MONDO:0005192,MeSH:C562463,MedGen:C0235974,OMIM:260350,Orphanet:1333,Orphanet:217074|Human Phenotype Ontology:HP:0010816,MONDO:MONDO:0008093,MedGen:C0334082,OMIM:162900,Orphanet:79414|Human Phenotype Ontology:HP:0010815,MedGen:C3854181|Human Phenotype Ontology:HP:0010817,MONDO:MONDO:0008097,MedGen:C4552097,OMIM:163200,Orphanet:2612|Human Phenotype Ontology:HP:0012209,MONDO:MONDO:0011908,MedGen:C0349639,OMIM:607785,Orphanet:86834|MONDO:MONDO:0013767,MedGen:C2674723,OMIM:614470,Orphanet:268114|Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MedGen:C3661900|MONDO:MONDO:0005138,MedGen:C0684249|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391|Human Phenotype Ontology:HP:0002408,MONDO:MONDO:0007154,MedGen:C0917804,OMIM:108010,Orphanet:46724||MedGen:C4302356|MONDO:MONDO:0020783,MedGen:C4747394,OMIM:608354,Orphanet:137667,Orphanet:90307|MONDO:MONDO:0013074,MedGen:C0406612,OMIM:613001,Orphanet:2396|Human Phenotype Ontology:HP:0012126,MONDO:MONDO:0001056,MeSH:D013274,MedGen:C0024623,OMIM:613659|MONDO:MONDO:0006096,MedGen:C0349579]; Endometrial hyperplasia without atypia [MONDO:MONDO:0006193,MedGen:C1516855] |
|
rs121913529
|
Pathogenic |
Carcinoma of pancreas|Nevus sebaceous|Juvenile myelomonocytic leukemia|Non-small cell lung carcinoma|not provided|Thyroid tumor|Neoplasm of ovary|Acute myeloid leukemia|Neoplasm of the large intestine|Cerebral arteriovenous malformation|Chronic myelogenous leukemia, BCR-ABL1 positive|Linear nevus sebaceous syndrome|Lung sarcomatoid carcinoma|RASopathy [MONDO:MONDO:0005192,MeSH:C562463,MedGen:C0235974,OMIM:260350,Orphanet:1333,Orphanet:217074|Human Phenotype Ontology:HP:0010815,MedGen:C3854181|Human Phenotype Ontology:HP:0012209,MONDO:MONDO:0011908,MedGen:C0349639,OMIM:607785,Orphanet:86834|Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|MedGen:C3661900|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0002408,MONDO:MONDO:0007154,MedGen:C0917804,OMIM:108010,Orphanet:46724|Human Phenotype Ontology:HP:0005506,Human Phenotype Ontology:HP:0005544,MONDO:MONDO:0011996,MeSH:D015464,MedGen:C0279543,OMIM:608232,Orphanet:521|Human Phenotype Ontology:HP:0010817,MONDO:MONDO:0008097,MedGen:C4552097,OMIM:163200,Orphanet:2612|MONDO:MONDO:0006279,MedGen:C1708781|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391] |
|
rs121913529
|
LP/P |
Gastric cancer (GASC) [MIM:613659] |
|
rs121913530
|
US |
Lung carcinoma |
|
rs121913530
|
Pathogenic/Likely pathogenic |
Squamous cell lung carcinoma|Malignant tumor of urinary bladder|Non-small cell lung carcinoma|Thyroid tumor|Neoplasm of ovary|Neoplasm of the large intestine|Adenoid cystic carcinoma|not provided|RASopathy [Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MONDO:MONDO:0001187,MedGen:C0005684,OMIM:109800,Orphanet:157980|Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0004971,MeSH:D003528,MedGen:C0010606|MedGen:C3661900|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391] |
|
rs121913530
|
LP/P |
Leukemia, juvenile myelomonocytic (JMML) [MIM:607785] |
|
rs121913530
|
Likely pathogenic |
Lung carcinoma|Non-small cell lung carcinoma|Endometrial carcinoma|Thyroid tumor|Neoplasm of ovary|Lung adenocarcinoma|Neoplasm of the large intestine|Gallbladder cancer|not provided|RASopathy [MONDO:MONDO:0005138,MedGen:C0684249|Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|Human Phenotype Ontology:HP:0012114,MONDO:MONDO:0002447,MedGen:C0476089,OMIM:608089|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0005411,MedGen:C0153452|MedGen:C3661900|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391] |
|
rs121913535
|
LB/B |
- |
|
rs121913535
|
Pathogenic/Likely pathogenic |
Non-small cell lung carcinoma|Autoimmune lymphoproliferative syndrome type 4|Neoplasm of the large intestine|not provided|KRAS-related disorders [Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|MONDO:MONDO:0013767,MedGen:C2674723,OMIM:614470,Orphanet:268114|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MedGen:CN517202|] |
|
rs121913538
|
LP/P |
Oculoectodermal syndrome (OES) [MIM:600268] |
|
rs121913538
|
Pathogenic |
OCULOECTODERMAL SYNDROME, SOMATIC|Angiosarcoma|Encephalocraniocutaneous lipomatosis|RASopathy [|Human Phenotype Ontology:HP:0200058,MONDO:MONDO:0016982,MeSH:D006394,MedGen:C0018923,Orphanet:263413|MONDO:MONDO:0013074,MedGen:C0406612,OMIM:613001,Orphanet:2396|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391] |
|
rs121913549
|
Pathogenic |
Familial visceral amyloidosis, Ostertag type [MONDO:MONDO:0007099,MedGen:C0268389,OMIM:105200,Orphanet:85450] |
|
rs121913580
|
Pathogenic |
Methylcobalamin deficiency type cblG [MONDO:MONDO:0009609,MedGen:C1855128,OMIM:250940,Orphanet:2170,Orphanet:622] |
|
rs121917746
|
Pathogenic |
Dopa-responsive dystonia due to sepiapterin reductase deficiency [MONDO:MONDO:0012994,MedGen:C0268468,OMIM:612716,Orphanet:70594] |
|
rs121917757
|
Likely pathogenic |
Myopathy, congenital, with excess of muscle spindles|Costello syndrome|not provided [MONDO:MONDO:0800299,MedGen:C1968782|MONDO:MONDO:0009026,MedGen:C0587248,OMIM:218040,Orphanet:3071|MedGen:C3661900] |
|
rs121917758
|
LP/P |
Costello syndrome (CSTLO) [MIM:218040] |
|
rs121917759
|
LP/P |
Costello syndrome (CSTLO) [MIM:218040] |
|
rs121917759
|
Likely pathogenic |
Costello syndrome|Neoplasm of the large intestine|Acute myeloid leukemia|Gastric adenocarcinoma|Multiple myeloma|Neoplasm of uterine cervix|Lung adenocarcinoma [MONDO:MONDO:0009026,MedGen:C0587248,OMIM:218040,Orphanet:3071|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013] |
|
rs121917765
|
LP/P |
Segawa syndrome autosomal recessive (ARSEGS) [MIM:605407] |
|
rs121917866
|
LP/P |
Hereditary coproporphyria (HCP) [MIM:121300] |
|
rs121917868
|
LP/P |
Harderoporphyria (HARPO) [MIM:618892] |
|
rs121917868
|
Pathogenic/Likely pathogenic |
Harderoporphyria|not provided|Harderoporphyria [MONDO:MONDO:0030048,MedGen:C0342859,OMIM:618892|MedGen:C3661900|MONDO:MONDO:0030048,MedGen:C0342859,OMIM:618892]; Hereditary coproporphyria [MONDO:MONDO:0007369,MedGen:C0162531,OMIM:121300,Orphanet:79273] |
|
rs121917872
|
LP/P |
Hereditary coproporphyria (HCP) [MIM:121300] |
|
rs121917874
|
LP/P |
Hereditary coproporphyria (HCP) [MIM:121300] |
|
rs121917887
|
LB/B |
- |
|
rs121918058
|
LP/P |
Familial porphyria cutanea tarda (FPCT) [MIM:176100] |
|
rs121918063
|
LP/P |
Familial porphyria cutanea tarda (FPCT) [MIM:176100] |
|
rs121918189
|
- |
- |
|
rs121918189
|
Pathogenic |
Fructose-biphosphatase deficiency [MONDO:MONDO:0009251,MedGen:C0016756,OMIM:229700,Orphanet:348] |
|
rs121918190
|
Pathogenic |
Fructose-biphosphatase deficiency [MONDO:MONDO:0009251,MedGen:C0016756,OMIM:229700,Orphanet:348] |
|
rs121918329
|
LP/P |
3-hydroxyisobutryl-CoA hydrolase deficiency (HIBCHD) [MIM:250620] |
|
rs121918614
|
Likely pathogenic |
Migraine, familial hemiplegic, 2|Familial hemiplegic migraine [MONDO:MONDO:0011232,MedGen:C1865322,OMIM:602481,Orphanet:569|MONDO:MONDO:0000700,MedGen:C0338484,OMIM:PS141500] |
|
rs121918616
|
Pathogenic/Likely pathogenic |
Migraine, familial basilar|not provided|Familial hemiplegic migraine|ATP1A2-RELATED DISORDERS|Migraine, familial hemiplegic, 2 [MedGen:C1865323|MedGen:C3661900|MONDO:MONDO:0000700,MedGen:C0338484,OMIM:PS141500||MONDO:MONDO:0011232,MedGen:C1865322,OMIM:602481,Orphanet:569] |
|
rs121918620
|
Pathogenic/Likely pathogenic |
Migraine, familial hemiplegic, 2|Familial hemiplegic migraine|Inborn genetic diseases|not provided [MONDO:MONDO:0011232,MedGen:C1865322,OMIM:602481,Orphanet:569|MONDO:MONDO:0000700,MedGen:C0338484,OMIM:PS141500|MeSH:D030342,MedGen:C0950123|MedGen:C3661900] |
|
rs121918822
|
US |
- |
|
rs121918824
|
LB/B |
- |
|
rs121964852
|
Pathogenic |
Congenital myopathy 4B, autosomal recessive|Congenital myopathy 4A, autosomal dominant|not provided|Congenital myopathy 4B, autosomal recessive [MONDO:MONDO:0012239,MedGen:C5829889,OMIM:609284,Orphanet:171433,Orphanet:171439,Orphanet:171881|MONDO:MONDO:0800341,MedGen:CN178536,OMIM:255310|MedGen:C3661900|MONDO:MONDO:0012239,MedGen:C5829889,OMIM:609284,Orphanet:171433,Orphanet:171439,Orphanet:171881]; Congenital myopathy with fiber type disproportion|See cases [MONDO:MONDO:0009711,MedGen:C0546264,Orphanet:2020|] |
|
rs121964854
|
Pathogenic/Likely pathogenic |
Congenital myopathy with fiber type disproportion|not provided|Congenital myopathy 4B, autosomal recessive|Congenital myopathy 4B, autosomal recessive [MONDO:MONDO:0009711,MedGen:C0546264,Orphanet:2020|MedGen:C3661900|MONDO:MONDO:0012239,MedGen:C5829889,OMIM:609284,Orphanet:171433,Orphanet:171439,Orphanet:171881|MONDO:MONDO:0012239,MedGen:C5829889,OMIM:609284,Orphanet:171433,Orphanet:171439,Orphanet:171881]; Congenital myopathy with fiber type disproportion|Congenital myopathy 4A, autosomal dominant [MONDO:MONDO:0009711,MedGen:C0546264,Orphanet:2020|MONDO:MONDO:0800341,MedGen:CN178536,OMIM:255310] |
|
rs121964925
|
LP/P |
Erythrocytosis, familial, 8 (ECYT8) [MIM:222800] |
|
rs121964962
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs121964962
|
Pathogenic |
Homocystinuria, pyridoxine-nonresponsive|HYPERHOMOCYSTEINEMIA, THROMBOTIC, CBS-RELATED|not provided|Classic homocystinuria|Homocystinuria|Familial thoracic aortic aneurysm and aortic dissection [MedGen:C4017308|MedGen:C3150344|MedGen:C3661900|MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394|Human Phenotype Ontology:HP:0002156,MONDO:MONDO:0004737,MedGen:C0019880|MONDO:MONDO:0019625,MedGen:C4707243,OMIM:PS607086,Orphanet:91387] |
|
rs121964963
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs121964966
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs121964967
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs121964968
|
- |
- |
|
rs121964968
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs121964969
|
- |
- |
|
rs121964969
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs121964969
|
Pathogenic/Likely pathogenic |
Homocystinuria, pyridoxine-responsive|Classic homocystinuria|Homocystinuria|HYPERHOMOCYSTEINEMIA, THROMBOTIC, CBS-RELATED|not provided|Familial thoracic aortic aneurysm and aortic dissection [MedGen:C3502110|MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394|Human Phenotype Ontology:HP:0002156,MONDO:MONDO:0004737,MedGen:C0019880|MedGen:C3150344|MedGen:C3661900|MONDO:MONDO:0019625,MedGen:C4707243,OMIM:PS607086,Orphanet:91387] |
|
rs121964970
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs121964972
|
- |
- |
|
rs121964972
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs121964973
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs121964988
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs121964989
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs121964991
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs121964993
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs121964997
|
Pathogenic |
Deficiency of hydroxymethylglutaryl-CoA lyase|not provided|Long chain 3-hydroxyacyl-CoA dehydrogenase deficiency [MONDO:MONDO:0009520,MedGen:C0268601,OMIM:246450,Orphanet:20|MedGen:C3661900|MONDO:MONDO:0012173,MedGen:C3711645,OMIM:609016,Orphanet:5] |
|
rs121964999
|
Pathogenic/Likely pathogenic |
not provided|Maple syrup urine disease|See cases|Maple syrup urine disease type 2 [MedGen:C3661900|MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511||MONDO:MONDO:0023693,MedGen:C1855371,OMIM:620699] |
|
rs121965002
|
Pathogenic |
Maple syrup urine disease type 2 [MONDO:MONDO:0023693,MedGen:C1855371,OMIM:620699] |
|
rs121965029
|
- |
- |
|
rs121965029
|
Pathogenic |
Mucopolysaccharidosis, MPS-I-H/S|Hurler syndrome|Mucopolysaccharidosis type 1 [MONDO:MONDO:0011759,MedGen:C0086431,OMIM:607015,Orphanet:93476|Human Phenotype Ontology:HP:0000943,MONDO:MONDO:0011758,MedGen:C0086795,OMIM:607014,Orphanet:93473|MONDO:MONDO:0001586,MedGen:C0023786,Orphanet:579] |
|
rs121965029
|
LP/P |
Mucopolysaccharidosis 1S (MPS1S) [MIM:607016] |
|
rs121965074
|
Likely pathogenic |
Tyrosinemia type I [MONDO:MONDO:0010161,MedGen:C0268490,OMIM:276700,Orphanet:882] |
|
rs1220386463
|
US |
A colorectal cancer sample |
|
rs1220524211
|
- |
- |
|
rs1220608789
|
Likely pathogenic |
Dihydropyrimidine dehydrogenase deficiency [MONDO:MONDO:0010130,MedGen:C1959620,OMIM:274270,Orphanet:1675] |
|
rs1220952473
|
- |
- |
|
rs1221010438
|
Pathogenic |
not provided|Deficiency of steroid 11-beta-monooxygenase [MedGen:C3661900|MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795] |
|
rs1221026723
|
- |
- |
|
rs1221315322
|
- |
- |
|
rs1222936229
|
- |
- |
|
rs1223667143
|
- |
- |
|
rs122461163
|
Pathogenic |
HSD10 mitochondrial disease [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295] |
|
rs122462164
|
Pathogenic |
HSD10 mitochondrial disease [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295] |
|
rs1226928039
|
- |
- |
|
rs1227427396
|
LP/P |
Pyruvate kinase deficiency of red cells (PKRD) [MIM:266200] |
|
rs1228918719
|
- |
- |
|
rs1228918719
|
LP/P |
Congenital bile acid synthesis defect 2 (CBAS2) [MIM:235555] |
|
rs1229554099
|
- |
- |
|
rs1229984
|
LB/B |
- |
|
rs1230592431
|
- |
- |
|
rs1231529155
|
Pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1232001857
|
Likely pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs1232923691
|
- |
- |
|
rs1233115152
|
- |
- |
|
rs1233969418
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1234354755
|
Pathogenic |
Classic homocystinuria|HYPERHOMOCYSTEINEMIA, THROMBOTIC, CBS-RELATED [MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394|MedGen:C3150344] |
|
rs1234657138
|
- |
- |
|
rs1235670046
|
- |
- |
|
rs1236647498
|
Pathogenic/Likely pathogenic |
GNE myopathy|GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602|MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602]; Sialuria|not provided [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166|MedGen:C3661900] |
|
rs1236669456
|
Pathogenic |
Congenital bile acid synthesis defect 2 [MONDO:MONDO:0009339,MedGen:C1856127,OMIM:235555,Orphanet:79303] |
|
rs1239029841
|
LP/P |
Pyruvate kinase deficiency of red cells (PKRD) [MIM:266200] |
|
rs1239594775
|
- |
- |
|
rs1240333808
|
- |
- |
|
rs12414460
|
- |
- |
|
rs1241692940
|
Pathogenic |
Hepatic methionine adenosyltransferase deficiency [MONDO:MONDO:0009607,MedGen:C0268621,OMIM:250850,Orphanet:168598] |
|
rs1242028775
|
- |
- |
|
rs1242028775
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1243515778
|
Pathogenic/Likely pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs1243598920
|
- |
- |
|
rs1244511644
|
LP/P |
Leber congenital amaurosis 9 (LCA9) [MIM:608553] |
|
rs1244531323
|
- |
- |
|
rs1244655820
|
Pathogenic/Likely pathogenic |
Sanfilippo syndrome|Mucopolysaccharidosis, MPS-III-B|Mucopolysaccharidosis, MPS-III-B [MONDO:MONDO:0018937,MedGen:C0026706,Orphanet:581|MONDO:MONDO:0009656,MedGen:C0086648,OMIM:252920,Orphanet:79270|MONDO:MONDO:0009656,MedGen:C0086648,OMIM:252920,Orphanet:79270]; Charcot-Marie-Tooth disease axonal type 2V|not provided|Inborn genetic diseases [MONDO:MONDO:0014665,MedGen:C5569050,OMIM:616491,Orphanet:447964|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs1245368879
|
Pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1245431558
|
- |
- |
|
rs1245981952
|
- |
- |
|
rs1246861211
|
Pathogenic |
Non-immune hydrops fetalis [Human Phenotype Ontology:HP:0001790,MONDO:MONDO:0009369,MedGen:C0455988,OMIM:236750,Orphanet:363999] |
|
rs1247270735
|
- |
- |
|
rs1247497521
|
Pathogenic/Likely pathogenic |
not provided|Purine-nucleoside phosphorylase deficiency [MedGen:C3661900|MONDO:MONDO:0013171,MedGen:C0268125,OMIM:613179,Orphanet:760] |
|
rs1249530918
|
LP/P |
Hypotrichosis 14 (HYPT14) [MIM:618275] |
|
rs1250076835
|
- |
- |
|
rs1250941205
|
- |
- |
|
rs1250997630
|
Pathogenic/Likely pathogenic |
Pigmentary pallidal degeneration|not provided [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850|MedGen:C3661900] |
|
rs1251962665
|
- |
- |
|
rs1252881714
|
- |
- |
|
rs1254633416
|
- |
- |
|
rs1255326315
|
- |
- |
|
rs1256975692
|
- |
- |
|
rs1257727040
|
- |
- |
|
rs1258494752
|
LP/P |
Pyruvate carboxylase deficiency (PC deficiency) [MIM:266150] |
|
rs1259755308
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs1260079066
|
- |
- |
|
rs1260079066
|
Pathogenic |
Autosomal recessive DOPA responsive dystonia [MONDO:MONDO:0011551,MedGen:C2673535,OMIM:605407,Orphanet:101150] |
|
rs1260394550
|
Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs1262762031
|
- |
- |
|
rs1263528770
|
- |
- |
|
rs1265148467
|
- |
- |
|
rs1265872256
|
- |
- |
|
rs1267396058
|
Pathogenic |
Pseudohypoparathyroidism type I A [MONDO:MONDO:0007078,MedGen:C3494506,OMIM:103580,Orphanet:79443] |
|
rs1267443415
|
Pathogenic |
Neuronopathy, distal hereditary motor, autosomal recessive 8 [MONDO:MONDO:0030055,MedGen:C5394466,OMIM:618912] |
|
rs1267519974
|
Likely pathogenic |
Intellectual disability, X-linked 102 [MONDO:MONDO:0010497,MedGen:C5393299,OMIM:300958,Orphanet:457260] |
|
rs1268640442
|
LP/P |
Ethylmalonic encephalopathy (EE) [MIM:602473] |
|
rs1270571213
|
LP/P |
Interstitial nephritis, karyomegalic (KMIN) [MIM:614817] |
|
rs12721627
|
LB/B |
- |
|
rs12721629
|
LB/B |
- |
|
rs1272212207
|
- |
- |
|
rs1272546759
|
Likely pathogenic |
Pseudopseudohypoparathyroidism [MONDO:MONDO:0012912,MedGen:C0033835,OMIM:612463,Orphanet:79445] |
|
rs1272792336
|
- |
- |
|
rs1273597287
|
- |
- |
|
rs1273711073
|
- |
- |
|
rs1274851618
|
- |
- |
|
rs1275599086
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1276511608
|
- |
- |
|
rs1276998235
|
Pathogenic |
Hawkinsinuria [Human Phenotype Ontology:HP:0034457,MONDO:MONDO:0007700,MedGen:C2931042,OMIM:140350,Orphanet:2118] |
|
rs1278227329
|
Pathogenic/Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase|not provided [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134|MedGen:C3661900] |
|
rs1278639064
|
- |
- |
|
rs1280211937
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1280636156
|
- |
- |
|
rs1280898306
|
- |
- |
|
rs1281169684
|
- |
- |
|
rs1282031681
|
Likely pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
rs1283988003
|
- |
- |
|
rs1284200516
|
LP/P |
Ethylmalonic encephalopathy (EE) [MIM:602473] |
|
rs1286804191
|
LP/P |
Diabetes mellitus, permanent neonatal, 1 (PNDM1) [MIM:606176] |
|
rs1288116010
|
LP/P |
Leukodystrophy, hypomyelinating, 15 (HLD15) [MIM:617951] |
|
rs1289541397
|
- |
- |
|
rs1291114278
|
- |
- |
|
rs1291406206
|
- |
- |
|
rs1292504288
|
- |
- |
|
rs1294400653
|
- |
- |
|
rs1294428481
|
- |
- |
|
rs12948217
|
Pathogenic |
Spongy degeneration of central nervous system|not provided|Canavan Disease, Familial Form|Inborn genetic diseases [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141|MedGen:C3661900|MedGen:C0751663|MeSH:D030342,MedGen:C0950123] |
|
rs1296824835
|
- |
- |
|
rs1297642271
|
- |
- |
|
rs1298336881
|
- |
- |
|
rs1298799127
|
- |
- |
|
rs1298964491
|
- |
- |
|
rs1300241521
|
- |
- |
|
rs1301021797
|
LP/P |
Congenital disorder of glycosylation 1T (CDG1T) [MIM:614921] |
|
rs1301217000
|
- |
- |
|
rs1303770209
|
Pathogenic/Likely pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs1304160279
|
LP/P |
Osteopetrosis, autosomal recessive 3 (OPTB3) [MIM:259730] |
|
rs1304669003
|
Pathogenic |
Classic homocystinuria|not provided [MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394|MedGen:CN517202] |
|
rs1304689724
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs1304729997
|
- |
- |
|
rs1305147387
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1305385953
|
- |
- |
|
rs1305400916
|
- |
- |
|
rs1307944675
|
Pathogenic |
Perrault syndrome 1 [MONDO:MONDO:0009300,MedGen:C4551721,OMIM:233400,Orphanet:2855] |
|
rs1309003036
|
- |
- |
|
rs1309003036
|
Pathogenic/Likely pathogenic |
not provided|Pontocerebellar hypoplasia type 2D [MedGen:C3661900|MONDO:MONDO:0013438,MedGen:C3151140,OMIM:613811,Orphanet:2524] |
|
rs1309748501
|
- |
- |
|
rs1311224546
|
- |
- |
|
rs1311982393
|
Pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1312740080
|
- |
- |
|
rs1314085200
|
Pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395] |
|
rs1314529783
|
- |
- |
|
rs1315777461
|
Likely pathogenic |
Congenital bile acid synthesis defect 2 [MONDO:MONDO:0009339,MedGen:C1856127,OMIM:235555,Orphanet:79303] |
|
rs1315885236
|
- |
- |
|
rs1318565860
|
- |
- |
|
rs1319489001
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1320810473
|
LP/P |
Congenital disorder of glycosylation 1T (CDG1T) [MIM:614921] |
|
rs1322196849
|
- |
- |
|
rs13222
|
LP/P |
46,XY sex reversal 8 (SRXY8) [MIM:614279] |
|
rs1322698222
|
Likely pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
rs1323796901
|
- |
- |
|
rs1325460408
|
Likely pathogenic |
Fanconi renotubular syndrome 1 [MONDO:MONDO:0024525,MedGen:C4551503,OMIM:134600] |
|
rs1325669112
|
Pathogenic |
Kleefstra syndrome 1 [MONDO:MONDO:0027407,MedGen:C0795833,OMIM:610253,Orphanet:261494] |
|
rs1325986563
|
LP/P |
Glutathione synthetase deficiency (GSS deficiency) [MIM:266130] |
|
rs1326334493
|
- |
- |
|
rs1326526453
|
- |
- |
|
rs1326526453
|
LP/P |
Succinic semialdehyde dehydrogenase deficiency (SSADHD) [MIM:271980] |
|
rs1326916949
|
- |
- |
|
rs1327048960
|
Pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1327401976
|
LP/P |
Succinyl-CoA:3-oxoacid CoA transferase deficiency (SCOTD) [MIM:245050] |
|
rs1327662246
|
- |
- |
|
rs1328237103
|
- |
- |
|
rs1328320990
|
LP/P |
Hyperphenylalaninemia, BH4-deficient, A (HPABH4A) [MIM:261640] |
|
rs1329985221
|
- |
- |
|
rs13306279
|
- |
- |
|
rs13306303
|
- |
- |
|
rs1330753702
|
- |
- |
|
rs1331249320
|
LP/P |
Pseudovaginal perineoscrotal hypospadias (PPSH) [MIM:264600] |
|
rs1331843613
|
- |
- |
|
rs1332966015
|
Pathogenic |
not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1332971804
|
- |
- |
|
rs1333100080
|
Pathogenic |
Megaconial type congenital muscular dystrophy [MONDO:MONDO:0011246,MedGen:C1865233,OMIM:602541,Orphanet:280671] |
|
rs1333327173
|
- |
- |
|
rs1334933549
|
Pathogenic |
Epileptic encephalopathy, infantile or early childhood, 1 [MONDO:MONDO:0020630,MedGen:C4540199,OMIM:617711] |
|
rs1335558363
|
Pathogenic |
Familial hypocalciuric hypercalcemia 2 [MONDO:MONDO:0007792,MedGen:C1840347,OMIM:145981,Orphanet:101049,Orphanet:405] |
|
rs1337182136
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1337350024
|
- |
- |
|
rs1337480983
|
- |
- |
|
rs1338023969
|
Pathogenic/Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1339474843
|
- |
- |
|
rs1339474843
|
Likely pathogenic |
Oocyte maturation defect 2 [MONDO:MONDO:0021573,MedGen:C4225210,OMIM:616780] |
|
rs1340115666
|
- |
- |
|
rs1340227061
|
- |
- |
|
rs13408961
|
LB/B |
- |
|
rs1343080275
|
- |
- |
|
rs1344826245
|
Likely pathogenic |
Adenine phosphoribosyltransferase deficiency [MONDO:MONDO:0013869,MedGen:C0268120,OMIM:614723,Orphanet:976] |
|
rs1344907223
|
- |
- |
|
rs1345036090
|
Pathogenic |
Hemolytic anemia due to glutathione reductase deficiency [MONDO:MONDO:0019531,MedGen:C5231513,OMIM:618660,Orphanet:90030] |
|
rs1345105436
|
- |
- |
|
rs1345605596
|
Pathogenic |
Leber congenital amaurosis 9 [MONDO:MONDO:0012056,MedGen:C1837873,OMIM:608553,Orphanet:65] |
|
rs1347586947
|
- |
- |
|
rs1347651454
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs1347651454
|
Pathogenic |
Homocystinuria|Familial thoracic aortic aneurysm and aortic dissection|HYPERHOMOCYSTEINEMIA, THROMBOTIC, CBS-RELATED|See cases|Classic homocystinuria [Human Phenotype Ontology:HP:0002156,MONDO:MONDO:0004737,MedGen:C0019880|MONDO:MONDO:0019625,MedGen:C4707243,OMIM:PS607086,Orphanet:91387|MedGen:C3150344||MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394] |
|
rs1348504554
|
Likely pathogenic |
HSD10 mitochondrial disease [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295] |
|
rs1348837644
|
- |
- |
|
rs1350026845
|
- |
- |
|
rs1350170100
|
- |
- |
|
rs1350949739
|
- |
- |
|
rs1351295710
|
Likely pathogenic |
Corticosterone 18-monooxygenase deficiency|CYP11B2-related disorder|not provided [MONDO:MONDO:0008751,MedGen:C0268293,OMIM:203400,Orphanet:427||MedGen:C3661900] |
|
rs1355039694
|
- |
- |
|
rs1355672978
|
- |
- |
|
rs1356115868
|
- |
- |
|
rs1357271377
|
US |
A colorectal cancer sample |
|
rs1357895717
|
- |
- |
|
rs1357942068
|
LP/P |
3-hydroxy-3-methylglutaryl-CoA lyase deficiency (HMGCLD) [MIM:246450] |
|
rs1358193875
|
- |
- |
|
rs1360253040
|
- |
- |
|
rs1360415315
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1360415315
|
Pathogenic |
not provided|Maturity-onset diabetes of the young type 2|Hyperinsulinism due to glucokinase deficiency [MedGen:C3661900|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299]; Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552]; Permanent neonatal diabetes mellitus [MONDO:MONDO:0100164,MedGen:C1833104,OMIM:PS606176,Orphanet:99885]; Type 2 diabetes mellitus|Maturity onset diabetes mellitus in young|Monogenic diabetes [Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs1360692694
|
- |
- |
|
rs1362222659
|
- |
- |
|
rs1362994447
|
Likely pathogenic |
not provided|Autosomal dominant nonsyndromic hearing loss 20 [MedGen:C3661900|MONDO:MONDO:0011480,MedGen:C1858172,OMIM:604717,Orphanet:90635]; Baraitser-winter syndrome 2 [MONDO:MONDO:0013812,MedGen:C3281235,OMIM:614583,Orphanet:2995] |
|
rs1363187738
|
- |
- |
|
rs1363857729
|
- |
- |
|
rs1363997553
|
- |
- |
|
rs1364564756
|
- |
- |
|
rs1364971527
|
Pathogenic/Likely pathogenic |
Beta-hydroxyisobutyryl-CoA deacylase deficiency|See cases [MONDO:MONDO:0009603,MedGen:C0342738,OMIM:250620,Orphanet:88639|] |
|
rs1366239043
|
- |
- |
|
rs1366833576
|
- |
- |
|
rs1371496558
|
LP/P |
Cerebral creatine deficiency syndrome 2 (CCDS2) [MIM:612736] |
|
rs1372608166
|
- |
- |
|
rs1373919219
|
- |
- |
|
rs1375656631
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1375748581
|
Pathogenic |
Deficiency of malonyl-CoA decarboxylase [MONDO:MONDO:0009556,MedGen:C0342793,OMIM:248360,Orphanet:943] |
|
rs1376129073
|
- |
- |
|
rs1377962337
|
- |
- |
|
rs1378312777
|
- |
- |
|
rs1378338444
|
Pathogenic/Likely pathogenic |
GM1 gangliosidosis type 3 [MONDO:MONDO:0009262,MedGen:C0268273,OMIM:230650,Orphanet:79257]; Infantile GM1 gangliosidosis [MONDO:MONDO:0009260,MedGen:C0268271,OMIM:230500,Orphanet:354,Orphanet:79255]; GM1 gangliosidosis type 2|GM1 gangliosidosis [MONDO:MONDO:0009261,MedGen:C0268272,OMIM:230600,Orphanet:354,Orphanet:79256|MONDO:MONDO:0018149,MedGen:C0085131,Orphanet:354]; Mucopolysaccharidosis, MPS-IV-B [MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582] |
|
rs137852316
|
LP/P |
Anemia, non-spherocytic hemolytic, due to G6PD deficiency (NSHA) [MIM:300908] |
|
rs137852325
|
LP/P |
Anemia, non-spherocytic hemolytic, due to G6PD deficiency (NSHA) [MIM:300908] |
|
rs137852329
|
LP/P |
Anemia, non-spherocytic hemolytic, due to G6PD deficiency (NSHA) [MIM:300908] |
|
rs137852341
|
LB/B |
- |
|
rs137852349
|
LP/P |
Anemia, non-spherocytic hemolytic, due to G6PD deficiency (NSHA) [MIM:300908] |
|
rs137852485
|
LP/P |
Hyperuricemia, HPRT-related (HRH) [MIM:300323] |
|
rs137852487
|
LP/P |
Lesch-Nyhan syndrome (LNS) [MIM:300322] |
|
rs137852487
|
Pathogenic |
HPRT NEW HAVEN|Lesch-Nyhan syndrome|Partial hypoxanthine-guanine phosphoribosyltransferase deficiency [|MONDO:MONDO:0010298,MedGen:C0023374,OMIM:300322,Orphanet:510|MONDO:MONDO:0010299,MedGen:C0268117,OMIM:300323,Orphanet:79233]; Lesch-Nyhan syndrome [MONDO:MONDO:0010298,MedGen:C0023374,OMIM:300322,Orphanet:510] |
|
rs137852488
|
LP/P |
Lesch-Nyhan syndrome (LNS) [MIM:300322] |
|
rs137852489
|
Pathogenic |
Lesch-Nyhan syndrome|Lesch-Nyhan syndrome [MONDO:MONDO:0010298,MedGen:C0023374,OMIM:300322,Orphanet:510|MONDO:MONDO:0010298,MedGen:C0023374,OMIM:300322,Orphanet:510]; Partial hypoxanthine-guanine phosphoribosyltransferase deficiency [MONDO:MONDO:0010299,MedGen:C0268117,OMIM:300323,Orphanet:79233] |
|
rs137852496
|
LP/P |
Lesch-Nyhan syndrome (LNS) [MIM:300322] |
|
rs137852497
|
Pathogenic |
Lesch-Nyhan syndrome|Partial hypoxanthine-guanine phosphoribosyltransferase deficiency [MONDO:MONDO:0010298,MedGen:C0023374,OMIM:300322,Orphanet:510|MONDO:MONDO:0010299,MedGen:C0268117,OMIM:300323,Orphanet:79233]; Lesch-Nyhan syndrome [MONDO:MONDO:0010298,MedGen:C0023374,OMIM:300322,Orphanet:510] |
|
rs137852498
|
LP/P |
Hyperuricemia, HPRT-related (HRH) [MIM:300323] |
|
rs137852504
|
LP/P |
Hyperuricemia, HPRT-related (HRH) [MIM:300323] |
|
rs137852530
|
LB/B |
- |
|
rs137852533
|
LP/P |
Phosphoglycerate kinase 1 deficiency (PGK1D) [MIM:300653] |
|
rs137852539
|
Pathogenic |
Glycogen storage disease due to phosphoglycerate kinase 1 deficiency [MONDO:MONDO:0010392,MedGen:C1970848,OMIM:300653,Orphanet:713] |
|
rs137852543
|
LP/P |
Phosphoribosylpyrophosphate synthetase superactivity (PRPS1 superactivity) [MIM:300661] |
|
rs137852545
|
LP/P |
Phosphoribosylpyrophosphate synthetase superactivity (PRPS1 superactivity) [MIM:300661] |
|
rs137852640
|
Pathogenic |
3-hydroxy-3-methylglutaryl-CoA synthase deficiency [MONDO:MONDO:0011614,MedGen:C2751532,OMIM:605911,Orphanet:35701] |
|
rs137852695
|
Pathogenic |
Neuronal ceroid lipofuscinosis 1|not provided|Neuronal ceroid lipofuscinosis|Inborn genetic diseases [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MedGen:C3661900|MONDO:MONDO:0016295,MedGen:C0027877,OMIM:PS256730,Orphanet:216,Orphanet:79263|MeSH:D030342,MedGen:C0950123] |
|
rs137852696
|
Pathogenic |
Neuronal ceroid lipofuscinosis 1|not provided|Retinitis pigmentosa|Inborn genetic diseases|PPT1-related condition [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MedGen:C3661900|Human Phenotype Ontology:HP:0000547,MONDO:MONDO:0019200,MeSH:D012174,MedGen:C0035334,OMIM:268000,OMIM:PS268000,Orphanet:791|MeSH:D030342,MedGen:C0950123|] |
|
rs137852697
|
Pathogenic/Likely pathogenic |
Neuronal ceroid lipofuscinosis 1|not provided [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MedGen:C3661900] |
|
rs137852698
|
Pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs137852700
|
- |
- |
|
rs137852700
|
Pathogenic/Likely pathogenic |
Neuronal ceroid lipofuscinosis 1|not provided|Neuronal Ceroid-Lipofuscinosis, Recessive|Neuronal ceroid lipofuscinosis|Inborn genetic diseases|PPT1-related condition [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MedGen:C3661900|MedGen:CN239323|MONDO:MONDO:0016295,MedGen:C0027877,OMIM:PS256730,Orphanet:216,Orphanet:79263|MeSH:D030342,MedGen:C0950123|] |
|
rs137852702
|
Pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs137852727
|
Likely pathogenic |
Kleefstra syndrome 1 [MONDO:MONDO:0027407,MedGen:C0795833,OMIM:610253,Orphanet:261494] |
|
rs137852865
|
LP/P |
Tyrosinemia 3 (TYRSN3) [MIM:276710] |
|
rs137852873
|
US |
Maple syrup urine disease 1A (MSUD1A) [MIM:248600] |
|
rs137852959
|
LP/P |
Neurodegeneration with brain iron accumulation 1 (NBIA1) [MIM:234200] |
|
rs137852959
|
Pathogenic |
Pigmentary pallidal degeneration|Neurodegeneration with brain iron accumulation 1, atypical|Hypoprebetalipoproteinemia, acanthocytosis, retinitis pigmentosa, and pallidal degeneration|not provided|Inborn genetic diseases|Retinitis pigmentosa|Pigmentary pallidal degeneration [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850|MedGen:C2751506|MONDO:MONDO:0011798,MedGen:C1846582,OMIM:607236,Orphanet:157855|MedGen:C3661900|MeSH:D030342,MedGen:C0950123|Human Phenotype Ontology:HP:0000547,MONDO:MONDO:0019200,MeSH:D012174,MedGen:C0035334,OMIM:268000,OMIM:PS268000,Orphanet:791|MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850]; Hypoprebetalipoproteinemia, acanthocytosis, retinitis pigmentosa, and pallidal degeneration [MONDO:MONDO:0011798,MedGen:C1846582,OMIM:607236,Orphanet:157855] |
|
rs137852961
|
Pathogenic/Likely pathogenic |
Pigmentary pallidal degeneration|not provided [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850|MedGen:C3661900] |
|
rs137852962
|
- |
- |
|
rs137852962
|
LP/P |
Neurodegeneration with brain iron accumulation 1 (NBIA1) [MIM:234200] |
|
rs137852963
|
Likely pathogenic |
Pigmentary pallidal degeneration [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850] |
|
rs137853096
|
LP/P |
D-bifunctional protein deficiency (DBPD) [MIM:261515] |
|
rs137853101
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs137853102
|
LP/P |
3-alpha-hydroxyacyl-CoA dehydrogenase deficiency (HADH deficiency) [MIM:231530] |
|
rs137853165
|
LP/P |
Ichthyosis, X-linked (IXL) [MIM:308100] |
|
rs137853166
|
LP/P |
Ichthyosis, X-linked (IXL) [MIM:308100] |
|
rs137853167
|
LP/P |
Ichthyosis, X-linked (IXL) [MIM:308100] |
|
rs137853168
|
LP/P |
Ichthyosis, X-linked (IXL) [MIM:308100] |
|
rs137853194
|
Pathogenic |
Complex cortical dysplasia with other brain malformations 7 [MONDO:MONDO:0012399,MedGen:C3552236,OMIM:610031,Orphanet:300573] |
|
rs137853207
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs137853208
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs137853209
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs137853210
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs137853226
|
Pathogenic |
Pituitary dependent hypercortisolism [MONDO:MONDO:0009050,MedGen:C0221406,OMIM:219090,Orphanet:96253] |
|
rs137853261
|
LP/P |
Lowe oculocerebrorenal syndrome (OCRL) [MIM:309000] |
|
rs137853582
|
- |
- |
|
rs137853842
|
LP/P |
Lowe oculocerebrorenal syndrome (OCRL) [MIM:309000] |
|
rs137853846
|
LP/P |
Dent disease 2 (DENT2) [MIM:300555] |
|
rs137853848
|
LP/P |
Lowe oculocerebrorenal syndrome (OCRL) [MIM:309000] |
|
rs137853852
|
LP/P |
Lowe oculocerebrorenal syndrome (OCRL) [MIM:309000] |
|
rs137853853
|
LP/P |
Lowe oculocerebrorenal syndrome (OCRL) [MIM:309000] |
|
rs137853856
|
LP/P |
Lowe oculocerebrorenal syndrome (OCRL) [MIM:309000] |
|
rs137853857
|
LP/P |
Lowe oculocerebrorenal syndrome (OCRL) [MIM:309000] |
|
rs137853860
|
- |
- |
|
rs137853860
|
LP/P |
Galactosemia 3 (GALAC3) [MIM:230350] |
|
rs137853861
|
- |
- |
|
rs137853861
|
LP/P |
Galactosemia 3 (GALAC3) [MIM:230350] |
|
rs137854533
|
Pathogenic |
Pituitary adenoma 3, multiple types [MONDO:MONDO:0054665,MedGen:C4540135,OMIM:617686] |
|
rs137915627
|
- |
- |
|
rs1379218695
|
- |
- |
|
rs137933272
|
- |
- |
|
rs1379500249
|
- |
- |
|
rs1379750290
|
- |
- |
|
rs137976988
|
- |
- |
|
rs138014515
|
- |
- |
|
rs138025751
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs138105638
|
- |
- |
|
rs138110445
|
- |
- |
|
rs138112316
|
- |
- |
|
rs138142612
|
LB/B |
- |
|
rs138207257
|
LP/P |
Hyperoxaluria primary 3 (HP3) [MIM:613616] |
|
rs138367050
|
- |
- |
|
rs138479596
|
- |
- |
|
rs1384884525
|
- |
- |
|
rs138546498
|
- |
- |
|
rs138556525
|
Pathogenic |
not provided|Hepatic methionine adenosyltransferase deficiency|MAT1A-related condition [MedGen:C3661900|MONDO:MONDO:0009607,MedGen:C0268621,OMIM:250850,Orphanet:168598|] |
|
rs138613460
|
LP/P |
Leber congenital amaurosis 9 (LCA9) [MIM:608553] |
|
rs138630257
|
- |
- |
|
rs138675307
|
- |
- |
|
rs138692014
|
- |
- |
|
rs138781159
|
Pathogenic |
Adenine phosphoribosyltransferase deficiency [MONDO:MONDO:0013869,MedGen:C0268120,OMIM:614723,Orphanet:976] |
|
rs138781417
|
- |
- |
|
rs138825464
|
- |
- |
|
rs1388698482
|
- |
- |
|
rs138887023
|
- |
- |
|
rs138893744
|
Pathogenic |
Glycogen storage disease, type VII [MONDO:MONDO:0009295,MedGen:C0017926,OMIM:232800,Orphanet:371] |
|
rs13894
|
LB/B |
- |
|
rs139152162
|
- |
- |
|
rs139162483
|
- |
- |
|
rs139166171
|
- |
- |
|
rs139190720
|
- |
- |
|
rs139230476
|
- |
- |
|
rs1392361503
|
Pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs139238143
|
- |
- |
|
rs139250712
|
- |
- |
|
rs1392559810
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs139268034
|
- |
- |
|
rs139269539
|
- |
- |
|
rs1392697327
|
- |
- |
|
rs1392720513
|
- |
- |
|
rs139273956
|
- |
- |
|
rs139276176
|
- |
- |
|
rs1392934477
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1393023702
|
- |
- |
|
rs139332887
|
Pathogenic/Likely pathogenic |
not provided|Developmental and epileptic encephalopathy, 50|Infantile epileptic dyskinetic encephalopathy [MedGen:C3661900|MONDO:MONDO:0014647,MedGen:C4225320,OMIM:616457,Orphanet:448010|MONDO:MONDO:0018226,MedGen:C4552072,Orphanet:364063] |
|
rs1393887224
|
- |
- |
|
rs139388833
|
LP/P |
Congenital erythropoietic porphyria (CEP) [MIM:263700] |
|
rs139396226
|
- |
- |
|
rs139499540
|
- |
- |
|
rs139545909
|
- |
- |
|
rs139573311
|
Pathogenic |
Cystic fibrosis|not provided|Cystic fibrosis [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586|MedGen:C3661900|MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586]; Congenital bilateral aplasia of vas deferens from CFTR mutation|CFTR-related disorders|Hereditary pancreatitis [MONDO:MONDO:0010178,MedGen:C0403814,OMIM:277180,Orphanet:48||MONDO:MONDO:0008185,MedGen:C0238339,OMIM:167800,Orphanet:676]; Cystic fibrosis [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586]; Bronchiectasis with or without elevated sweat chloride 1 [MONDO:MONDO:0008887,MedGen:C2749757,OMIM:211400,Orphanet:60033]; Congenital bilateral aplasia of vas deferens from CFTR mutation|Bronchiectasis with or without elevated sweat chloride 1 [MONDO:MONDO:0010178,MedGen:C0403814,OMIM:277180,Orphanet:48|MONDO:MONDO:0008887,MedGen:C2749757,OMIM:211400,Orphanet:60033] |
|
rs139584437
|
- |
- |
|
rs139620518
|
- |
- |
|
rs139645527
|
Pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|Neural tube defects, folate-sensitive [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
rs139689788
|
- |
- |
|
rs1397449789
|
- |
- |
|
rs139751598
|
LP/P |
Cutis laxa, autosomal recessive, 2B (ARCL2B) [MIM:612940] |
|
rs1398420394
|
Likely pathogenic |
Purine-nucleoside phosphorylase deficiency [MONDO:MONDO:0013171,MedGen:C0268125,OMIM:613179,Orphanet:760] |
|
rs139843463
|
- |
- |
|
rs139869668
|
- |
- |
|
rs139948811
|
- |
- |
|
rs139998516
|
- |
- |
|
rs140015394
|
- |
- |
|
rs140049721
|
- |
- |
|
rs1400665585
|
- |
- |
|
rs140111676
|
- |
- |
|
rs140112183
|
- |
- |
|
rs140112768
|
- |
- |
|
rs140152561
|
LB/B |
- |
|
rs140180293
|
- |
- |
|
rs140239671
|
- |
- |
|
rs140332014
|
- |
- |
|
rs140387106
|
- |
- |
|
rs1405020783
|
Likely pathogenic |
Leber congenital amaurosis 9 [MONDO:MONDO:0012056,MedGen:C1837873,OMIM:608553,Orphanet:65] |
|
rs1405313151
|
- |
- |
|
rs1405334512
|
- |
- |
|
rs140549609
|
Pathogenic/Likely pathogenic |
Arginase deficiency [MONDO:MONDO:0008814,MedGen:C0268548,OMIM:207800,Orphanet:90] |
|
rs140581464
|
- |
- |
|
rs140602333
|
- |
- |
|
rs140626260
|
Pathogenic/Likely pathogenic |
Mitochondrial DNA depletion syndrome 9 [MONDO:MONDO:0009504,MedGen:C3151476,OMIM:245400,Orphanet:17] |
|
rs140629318
|
LP/P |
Acyl-CoA dehydrogenase very long-chain deficiency (ACADVLD) [MIM:201475] |
|
rs140641547
|
- |
- |
|
rs140665617
|
- |
- |
|
rs140778208
|
LB/B |
- |
|
rs140826989
|
Pathogenic |
Glycogen storage disease, type II|not provided [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365|MedGen:C3661900] |
|
rs1408616607
|
- |
- |
|
rs140923543
|
- |
- |
|
rs140928408
|
- |
- |
|
rs140960775
|
- |
- |
|
rs1409892710
|
Pathogenic |
Brody myopathy [MONDO:MONDO:0010977,MedGen:C1832918,OMIM:601003,Orphanet:53347] |
|
rs140992177
|
LB/B |
- |
|
rs1411316425
|
Likely pathogenic |
Baraitser-Winter syndrome 1 [MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995] |
|
rs1411730717
|
- |
- |
|
rs141210410
|
LP/P |
Combined immunodeficiency and megaloblastic anemia with or without hyperhomocysteinemia (CIMAH) [MIM:617780] |
|
rs1412501773
|
- |
- |
|
rs141275719
|
- |
- |
|
rs141292408
|
- |
- |
|
rs141315355
|
- |
- |
|
rs1414143303
|
- |
- |
|
rs1414143303
|
Pathogenic |
Congenital hyperammonemia, type I|Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147|MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147]; Pulmonary hypertension, neonatal, susceptibility to|Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371|MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
rs141437989
|
- |
- |
|
rs1414684396
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs141489852
|
- |
- |
|
rs141533320
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs141623265
|
- |
- |
|
rs141728876
|
- |
- |
|
rs1417315589
|
Pathogenic |
Childhood encephalopathy due to thiamine pyrophosphokinase deficiency [MONDO:MONDO:0013761,MedGen:C3280866,OMIM:614458,Orphanet:293955] |
|
rs141774245
|
- |
- |
|
rs141786030
|
LB/B |
- |
|
rs141805635
|
- |
- |
|
rs141810774
|
- |
- |
|
rs1419090736
|
Pathogenic |
Hereditary spastic paraplegia 45 [MONDO:MONDO:0013165,MedGen:C3888209,OMIM:613162,Orphanet:320396] |
|
rs1419461472
|
- |
- |
|
rs1419468984
|
- |
- |
|
rs1420321267
|
LP/P |
3-ketothiolase deficiency (3KTD) [MIM:203750] |
|
rs142034862
|
- |
- |
|
rs1420414848
|
Pathogenic/Likely pathogenic |
Tyrosinemia type I [MONDO:MONDO:0010161,MedGen:C0268490,OMIM:276700,Orphanet:882] |
|
rs1421045311
|
- |
- |
|
rs142106780
|
- |
- |
|
rs142114432
|
- |
- |
|
rs142179752
|
- |
- |
|
rs1422752351
|
Pathogenic/Likely pathogenic |
Kabuki syndrome|Kabuki syndrome 1 [MONDO:MONDO:0016512,MedGen:C0796004,OMIM:PS147920,Orphanet:2322|MONDO:MONDO:0007843,MedGen:CN030661,OMIM:147920,Orphanet:2322] |
|
rs1423560123
|
LP/P |
Adrenal hyperplasia 5 (AH5) [MIM:202110] |
|
rs1423978863
|
Pathogenic |
Hereditary cancer-predisposing syndrome|Mitochondrial complex II deficiency, nuclear type 1 [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0100294,MedGen:C5700310,OMIM:252011,Orphanet:3208]; Paragangliomas 5 [MONDO:MONDO:0013602,MedGen:C3279992,OMIM:614165,Orphanet:29072] |
|
rs142441831
|
- |
- |
|
rs142481170
|
- |
- |
|
rs142529153
|
- |
- |
|
rs142619172
|
- |
- |
|
rs142752477
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs142814307
|
LP/P |
Cerebral creatine deficiency syndrome 3 (CCDS3) [MIM:612718] |
|
rs142839840
|
- |
- |
|
rs142847271
|
- |
- |
|
rs1428589694
|
LP/P |
Segawa syndrome autosomal recessive (ARSEGS) [MIM:605407] |
|
rs1429178288
|
- |
- |
|
rs1430256295
|
- |
- |
|
rs143026820
|
- |
- |
|
rs143124288
|
Pathogenic/Likely pathogenic |
HYPERHOMOCYSTEINEMIA, THROMBOTIC, CBS-RELATED|Homocystinuria|Classic homocystinuria [MedGen:C3150344|Human Phenotype Ontology:HP:0002156,MONDO:MONDO:0004737,MedGen:C0019880|MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394] |
|
rs1432183079
|
LP/P |
Acyl-CoA dehydrogenase very long-chain deficiency (ACADVLD) [MIM:201475] |
|
rs1432262955
|
- |
- |
|
rs1432841878
|
Pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs143474105
|
- |
- |
|
rs143485300
|
- |
- |
|
rs143500332
|
- |
- |
|
rs143550601
|
Pathogenic/Likely pathogenic |
Glycogen storage disease, type V [MONDO:MONDO:0009293,MedGen:C0017924,OMIM:232600,Orphanet:368] |
|
rs143550642
|
- |
- |
|
rs143657539
|
Pathogenic/Likely pathogenic |
Inborn genetic diseases|Neuronal ceroid lipofuscinosis 1|Neuronal ceroid lipofuscinosis [MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MONDO:MONDO:0016295,MedGen:C0027877,OMIM:PS256730,Orphanet:216,Orphanet:79263] |
|
rs143742821
|
- |
- |
|
rs1437567292
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1438253227
|
- |
- |
|
rs143826965
|
- |
- |
|
rs1438933819
|
Pathogenic |
Classic homocystinuria [MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394] |
|
rs143938918
|
- |
- |
|
rs144038526
|
- |
- |
|
rs144040856
|
- |
- |
|
rs1440561057
|
- |
- |
|
rs1441030187
|
LP/P |
Cerebral creatine deficiency syndrome 2 (CCDS2) [MIM:612736] |
|
rs1441030187
|
Pathogenic |
Cerebral creatine deficiency syndrome|Deficiency of guanidinoacetate methyltransferase [MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172|MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382] |
|
rs144106544
|
- |
- |
|
rs144139747
|
LP/P |
Vertebral, cardiac, renal, and limb defects syndrome 3 (VCRL3) [MIM:618845] |
|
rs1441649062
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs144173415
|
- |
- |
|
rs144181978
|
LP/P |
Progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 4 (PEOB4) [MIM:617070] |
|
rs144377982
|
- |
- |
|
rs144457204
|
- |
- |
|
rs144503922
|
- |
- |
|
rs144508139
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs1445469430
|
- |
- |
|
rs1445870588
|
- |
- |
|
rs1446467099
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs1447069098
|
Pathogenic |
not provided|Congenital adrenal hyperplasia|Deficiency of steroid 11-beta-monooxygenase [MedGen:C3661900|Human Phenotype Ontology:HP:0008258,MONDO:MONDO:0018479,MedGen:C0001627,Orphanet:418|MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795]; Glucocorticoid-remediable aldosteronism [MONDO:MONDO:0007080,MedGen:C3838731,OMIM:103900,Orphanet:403] |
|
rs144723656
|
Pathogenic |
Maturity-onset diabetes of the young type 2|not provided [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:CN517202] |
|
rs144723656
|
Pathogenic/Likely pathogenic |
not provided|Maturity onset diabetes mellitus in young [MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1447365901
|
Pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs144739734
|
- |
- |
|
rs1447665588
|
LP/P |
Cerebral creatine deficiency syndrome 2 (CCDS2) [MIM:612736] |
|
rs144993986
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase [MedGen:C3661900|MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239] |
|
rs145087265
|
LP/P |
Succinic semialdehyde dehydrogenase deficiency (SSADHD) [MIM:271980] |
|
rs1450940305
|
- |
- |
|
rs145097404
|
- |
- |
|
rs145142862
|
- |
- |
|
rs1452483770
|
Pathogenic/Likely pathogenic |
Severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-negative, NK cell-negative, due to adenosine deaminase deficiency|Severe combined immunodeficiency disease [MONDO:MONDO:0007064,MedGen:C1863236,OMIM:102700,Orphanet:277|Human Phenotype Ontology:HP:0004430,MONDO:MONDO:0015974,MeSH:D016511,MedGen:C0085110,Orphanet:183660] |
|
rs1453167097
|
US |
Sporadic cancers |
|
rs145370575
|
- |
- |
|
rs1454273149
|
- |
- |
|
rs145567714
|
- |
- |
|
rs1455785164
|
LP/P |
Nonaka myopathy (NM) [MIM:605820] |
|
rs145639940
|
- |
- |
|
rs1456428824
|
- |
- |
|
rs145669559
|
- |
- |
|
rs145712373
|
- |
- |
|
rs145774441
|
- |
- |
|
rs145813597
|
US |
Sorbitol dehydrogenase deficiency with peripheral neuropathy (SORDD) [MIM:618912] |
|
rs145838142
|
Pathogenic/Likely pathogenic |
3-hydroxy-3-methylglutaryl-CoA synthase deficiency [MONDO:MONDO:0011614,MedGen:C2751532,OMIM:605911,Orphanet:35701] |
|
rs145889928
|
- |
- |
|
rs145899443
|
- |
- |
|
rs145989297
|
- |
- |
|
rs146027425
|
Pathogenic/Likely pathogenic |
not provided|Pyridoxal phosphate-responsive seizures [MedGen:C3661900|MONDO:MONDO:0012407,MedGen:C1864723,OMIM:610090,Orphanet:79096] |
|
rs146045963
|
- |
- |
|
rs146054415
|
- |
- |
|
rs146153216
|
- |
- |
|
rs146180463
|
- |
- |
|
rs1462559161
|
- |
- |
|
rs146269992
|
Pathogenic |
Protoporphyria, erythropoietic, 1|not provided [MONDO:MONDO:0008319,MedGen:C4692546,OMIM:177000,Orphanet:79278|MedGen:C3661900] |
|
rs146282307
|
- |
- |
|
rs146354908
|
- |
- |
|
rs1463626619
|
- |
- |
|
rs1463675604
|
- |
- |
|
rs1464223176
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs1464624373
|
- |
- |
|
rs146556418
|
- |
- |
|
rs1465803265
|
LP/P |
Neuronopathy, distal hereditary motor, 6 (HMN6) [MIM:604320] |
|
rs146655862
|
- |
- |
|
rs1466627565
|
- |
- |
|
rs1467790706
|
- |
- |
|
rs1467808566
|
- |
- |
|
rs1467902610
|
LP/P |
3-hydroxy-3-methylglutaryl-CoA lyase deficiency (HMGCLD) [MIM:246450] |
|
rs146938082
|
- |
- |
|
rs147044875
|
- |
- |
|
rs1470521850
|
Pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs147065275
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1471393474
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs147168294
|
- |
- |
|
rs1471862905
|
- |
- |
|
rs147238486
|
- |
- |
|
rs1474000585
|
US |
Leukodystrophy, hypomyelinating, 15 (HLD15) [MIM:617951] |
|
rs147402365
|
LB/B |
- |
|
rs147495819
|
- |
- |
|
rs1475294107
|
- |
- |
|
rs1475371630
|
- |
- |
|
rs147617160
|
- |
- |
|
rs1476637197
|
Pathogenic |
Maturity-onset diabetes of the young type 2|Monogenic diabetes [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs1477251308
|
- |
- |
|
rs1477361505
|
- |
- |
|
rs1477443863
|
Pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs147763700
|
Likely pathogenic |
Spongy degeneration of central nervous system [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141] |
|
rs1477651398
|
- |
- |
|
rs1478147351
|
US |
Leukemia, acute lymphoblastic (ALL) [MIM:613065] |
|
rs1478697086
|
Likely pathogenic |
Galactosylceramide beta-galactosidase deficiency [MONDO:MONDO:0009499,MedGen:C0023521,OMIM:245200,Orphanet:487] |
|
rs147928683
|
- |
- |
|
rs147984615
|
- |
- |
|
rs148026894
|
- |
- |
|
rs148032473
|
- |
- |
|
rs148036160
|
LB/B |
- |
|
rs1480930429
|
- |
- |
|
rs148119952
|
Pathogenic |
Intellectual developmental disorder with or without peripheral neuropathy [MONDO:MONDO:0859240,MedGen:C5676969,OMIM:619844] |
|
rs148197561
|
- |
- |
|
rs1482391482
|
- |
- |
|
rs148239543
|
- |
- |
|
rs148311934
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs148311934
|
Pathogenic |
Maturity-onset diabetes of the young type 2|not provided|Maturity onset diabetes mellitus in young|Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552]; Type 2 diabetes mellitus [Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853]; Hyperinsulinism due to glucokinase deficiency [MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299]; Permanent neonatal diabetes mellitus 1|Monogenic diabetes [MONDO:MONDO:0100165,MedGen:C5393570,OMIM:606176|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs148412181
|
Pathogenic/Likely pathogenic |
Neuronal ceroid lipofuscinosis 1|not provided|Neuronal ceroid lipofuscinosis|Global developmental delay [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MedGen:C3661900|MONDO:MONDO:0016295,MedGen:C0027877,OMIM:PS256730,Orphanet:216,Orphanet:79263|Human Phenotype Ontology:HP:0000754,Human Phenotype Ontology:HP:0001255,Human Phenotype Ontology:HP:0001263,Human Phenotype Ontology:HP:0001277,Human Phenotype Ontology:HP:0001292,Human Phenotype Ontology:HP:0002433,Human Phenotype Ontology:HP:0002473,Human Phenotype Ontology:HP:0002532,Human Phenotype Ontology:HP:0006793,Human Phenotype Ontology:HP:0006867,Human Phenotype Ontology:HP:0006885,Human Phenotype Ontology:HP:0006935,Human Phenotype Ontology:HP:0007005,Human Phenotype Ontology:HP:0007094,Human Phenotype Ontology:HP:0007106,Human Phenotype Ontology:HP:0007174,Human Phenotype Ontology:HP:0007224,Human Phenotype Ontology:HP:0007228,Human Phenotype Ontology:HP:0007342,Human Phenotype Ontology:HP:0025356,MedGen:C0557874] |
|
rs148412181
|
Pathogenic/Likely pathogenic |
Neuronal ceroid lipofuscinosis 1|Retinitis pigmentosa|not provided|Inborn genetic diseases [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|Human Phenotype Ontology:HP:0000547,MONDO:MONDO:0019200,MeSH:D012174,MedGen:C0035334,OMIM:268000,OMIM:PS268000,Orphanet:791|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs148478247
|
- |
- |
|
rs148542782
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs148550603
|
- |
- |
|
rs148563375
|
- |
- |
|
rs148572533
|
- |
- |
|
rs148593307
|
- |
- |
|
rs148602477
|
- |
- |
|
rs1486164573
|
- |
- |
|
rs148627840
|
- |
- |
|
rs148639841
|
LP/P |
3-ketothiolase deficiency (3KTD) [MIM:203750] |
|
rs1486763160
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs148785781
|
- |
- |
|
rs148840593
|
- |
- |
|
rs148865119
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs148865119
|
Pathogenic/Likely pathogenic |
not provided|Classic homocystinuria|HYPERHOMOCYSTEINEMIA, THROMBOTIC, CBS-RELATED|Familial thoracic aortic aneurysm and aortic dissection [MedGen:C3661900|MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394|MedGen:C3150344|MONDO:MONDO:0019625,MedGen:C4707243,OMIM:PS607086,Orphanet:91387] |
|
rs148890709
|
- |
- |
|
rs148943214
|
- |
- |
|
rs1490005005
|
- |
- |
|
rs149033118
|
- |
- |
|
rs1490487177
|
- |
- |
|
rs149081683
|
- |
- |
|
rs149119723
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs149152218
|
- |
- |
|
rs149180825
|
- |
- |
|
rs149224679
|
- |
- |
|
rs149229670
|
- |
- |
|
rs149295644
|
- |
- |
|
rs149353437
|
- |
- |
|
rs149408684
|
- |
- |
|
rs149445900
|
- |
- |
|
rs149518280
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs149520391
|
Pathogenic |
Severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-negative, NK cell-negative, due to adenosine deaminase deficiency [MONDO:MONDO:0007064,MedGen:C1863236,OMIM:102700,Orphanet:277] |
|
rs149585110
|
- |
- |
|
rs149881706
|
Pathogenic/Likely pathogenic |
Deficiency of steroid 11-beta-monooxygenase|not provided [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795|MedGen:C3661900] |
|
rs149916677
|
- |
- |
|
rs149917863
|
- |
- |
|
rs149975952
|
US |
Sorbitol dehydrogenase deficiency with peripheral neuropathy (SORDD) [MIM:618912] |
|
rs149977726
|
LP/P |
Mitochondrial DNA depletion syndrome 1, MNGIE type (MTDPS1) [MIM:603041] |
|
rs150010732
|
- |
- |
|
rs150090274
|
- |
- |
|
rs150181226
|
LP/P |
Desbuquois dysplasia 1 (DBQD1) [MIM:251450] |
|
rs150232968
|
- |
- |
|
rs150262349
|
- |
- |
|
rs150279875
|
- |
- |
|
rs150327444
|
- |
- |
|
rs150329930
|
- |
- |
|
rs150338273
|
LB/B |
- |
|
rs150456822
|
- |
- |
|
rs150526754
|
- |
- |
|
rs150547274
|
Pathogenic/Likely pathogenic |
not provided|Glycogen storage disease, type VI [MedGen:C3661900|MONDO:MONDO:0009294,MedGen:C0017925,OMIM:232700,Orphanet:369] |
|
rs150561917
|
- |
- |
|
rs150608402
|
- |
- |
|
rs150694299
|
- |
- |
|
rs150771380
|
- |
- |
|
rs150939574
|
- |
- |
|
rs151037870
|
- |
- |
|
rs151079750
|
LP/P |
Neuronopathy, distal hereditary motor, 6 (HMN6) [MIM:604320] |
|
rs151132024
|
- |
- |
|
rs151151350
|
- |
- |
|
rs1553128102
|
Likely pathogenic |
Leber congenital amaurosis [MONDO:MONDO:0018998,MeSH:D057130,MedGen:C0339527,OMIM:PS204000,Orphanet:65] |
|
rs1553131940
|
LP/P |
3-hydroxy-3-methylglutaryl-CoA lyase deficiency (HMGCLD) [MIM:246450] |
|
rs1553132209
|
Pathogenic |
Deficiency of hydroxymethylglutaryl-CoA lyase [MONDO:MONDO:0009520,MedGen:C0268601,OMIM:246450,Orphanet:20] |
|
rs1553185069
|
Likely pathogenic |
not provided|Homocystinuria due to methylene tetrahydrofolate reductase deficiency [MedGen:C3661900|MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395] |
|
rs1553196096
|
Pathogenic/Likely pathogenic |
not provided|Macrothrombocytopenia-lymphedema-developmental delay-facial dysmorphism-camptodactyly syndrome|Abnormality of blood and blood-forming tissues [MedGen:C3661900|MONDO:MONDO:0014757,MedGen:C4225222,OMIM:616737,Orphanet:487796|Human Phenotype Ontology:HP:0001871,Human Phenotype Ontology:HP:0003135,MedGen:C0850715]; Neurodevelopmental abnormality [Human Phenotype Ontology:HP:0012759,MedGen:C4022737]; Postnatal growth retardation [Human Phenotype Ontology:HP:0008844,Human Phenotype Ontology:HP:0008865,Human Phenotype Ontology:HP:0008868,Human Phenotype Ontology:HP:0008897,Human Phenotype Ontology:HP:0008901,Human Phenotype Ontology:HP:0008918,MedGen:C1859778]; Abnormality of the immune system [Human Phenotype Ontology:HP:0002715,Human Phenotype Ontology:HP:0003257,Human Phenotype Ontology:HP:0003346,Human Phenotype Ontology:HP:0010986,MedGen:C4021753]; Abnormal facial shape [Human Phenotype Ontology:HP:0001999,Human Phenotype Ontology:HP:0002004,Human Phenotype Ontology:HP:0002260,Human Phenotype Ontology:HP:0004643,Human Phenotype Ontology:HP:0004649,Human Phenotype Ontology:HP:0004652,Human Phenotype Ontology:HP:0004655,Human Phenotype Ontology:HP:0004675,Human Phenotype Ontology:HP:0005124,MedGen:C0424503] |
|
rs1553245771
|
Pathogenic |
not provided|Familial hemiplegic migraine [MedGen:C3661900|MONDO:MONDO:0000700,MedGen:C0338484,OMIM:PS141500] |
|
rs1553311527
|
Pathogenic/Likely pathogenic |
not provided|Noonan syndrome-like disorder with loose anagen hair 2 [MedGen:CN517202|MONDO:MONDO:0054588,MedGen:C4479577,OMIM:617506] |
|
rs1553500862
|
Pathogenic |
Keratoconus 9 [MONDO:MONDO:0054771,MedGen:C4693660,OMIM:617928] |
|
rs1553509297
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1553511785
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1553512642
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1553513429
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1553516442
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1553516443
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs1553518389
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1553612220
|
LP/P |
Mucopolysaccharidosis 4B (MPS4B) [MIM:253010] |
|
rs1553710664
|
LP/P |
Epileptic encephalopathy, infantile or early childhood, 3 (IECEE3) [MIM:618012] |
|
rs1553923787
|
LP/P |
Epileptic encephalopathy, infantile or early childhood, 1 (IECEE1) [MIM:617711] |
|
rs1553923787
|
Pathogenic/Likely pathogenic |
Inborn genetic diseases|Epileptic encephalopathy, infantile or early childhood, 1|Epileptic encephalopathy|Arthrogryposis, cleft palate, craniosynostosis, and impaired intellectual development [MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0020630,MedGen:C4540199,OMIM:617711|Human Phenotype Ontology:HP:0200134,MedGen:C0543888|MONDO:MONDO:0032642,MedGen:C4748872,OMIM:618265,Orphanet:565858]; Epileptic encephalopathy, infantile or early childhood, 1|not provided [MONDO:MONDO:0020630,MedGen:C4540199,OMIM:617711|MedGen:C3661900] |
|
rs1553925558
|
LP/P |
Epileptic encephalopathy, infantile or early childhood, 1 (IECEE1) [MIM:617711] |
|
rs1553957997
|
LP/P |
Hypertryptophanemia (HYPTRP) [MIM:600627] |
|
rs1554062814
|
- |
- |
|
rs1554126925
|
Likely pathogenic |
Complex cortical dysplasia with other brain malformations 7 [MONDO:MONDO:0012399,MedGen:C3552236,OMIM:610031,Orphanet:300573] |
|
rs1554258695
|
Pathogenic/Likely pathogenic |
Infantile-onset generalized dyskinesia with orofacial involvement|Striatal degeneration, autosomal dominant 2 [MONDO:MONDO:0044637,MedGen:C5567464,OMIM:616921,Orphanet:494526|MONDO:MONDO:0014835,MedGen:C4310791,OMIM:616922] |
|
rs1554263326
|
LP/P |
Intellectual developmental disorder, autosomal dominant 48 (MRD48) [MIM:617751] |
|
rs1554264268
|
LP/P |
Intellectual developmental disorder, autosomal dominant 48 (MRD48) [MIM:617751] |
|
rs1554329113
|
Likely pathogenic |
Baraitser-Winter syndrome 1 [MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995] |
|
rs1554334872
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2|Maturity onset diabetes mellitus in young [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1554334905
|
Likely pathogenic |
not specified|not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [MedGen:CN169374|MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1554335132
|
Pathogenic |
not specified|Maturity onset diabetes mellitus in young|Monogenic diabetes [MedGen:CN169374|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs1554335135
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1554335135
|
Pathogenic/Likely pathogenic |
not provided|Maturity onset diabetes mellitus in young [MedGen:CN517202|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1554335761
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1554411234
|
Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs1554481435
|
US |
A patient with chronic myelomonocytic leukemia |
|
rs1554652998
|
Pathogenic |
Deficiency of steroid 11-beta-monooxygenase|not provided [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795|MedGen:CN517202] |
|
rs1554652999
|
Pathogenic |
Deficiency of steroid 11-beta-monooxygenase [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795] |
|
rs1554653675
|
Pathogenic/Likely pathogenic |
Deficiency of steroid 11-beta-monooxygenase|not provided [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795|MedGen:C3661900] |
|
rs1554658910
|
LP/P |
Nonaka myopathy (NM) [MIM:605820] |
|
rs1554658955
|
Pathogenic |
Sialuria [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166]; GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602] |
|
rs1554664064
|
Pathogenic |
Sialuria [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166]; GNE myopathy|GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602|MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602] |
|
rs1554664064
|
LP/P |
Nonaka myopathy (NM) [MIM:605820] |
|
rs1554709677
|
Pathogenic |
Osteopetrosis with renal tubular acidosis [MONDO:MONDO:0009818,MedGen:C0345407,OMIM:259730,Orphanet:2785] |
|
rs1554767313
|
Pathogenic/Likely pathogenic |
Inborn genetic diseases|Developmental and epileptic encephalopathy, 31 [MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0014598,MedGen:C4225357,OMIM:616346,Orphanet:2382] |
|
rs1554767317
|
Pathogenic/Likely pathogenic |
Inborn genetic diseases|Developmental and epileptic encephalopathy, 31 [MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0014598,MedGen:C4225357,OMIM:616346,Orphanet:2382] |
|
rs1554770634
|
- |
- |
|
rs1554841990
|
Likely pathogenic |
Aortic aneurysm, familial thoracic 6 [MONDO:MONDO:0012730,MedGen:C2673186,OMIM:611788] |
|
rs1554859966
|
Pathogenic |
Microcephaly with or without chorioretinopathy, lymphedema, or intellectual disability [MONDO:MONDO:0007918,MedGen:C1835265,OMIM:152950,Orphanet:2526] |
|
rs1554922441
|
Likely pathogenic |
Autosomal recessive DOPA responsive dystonia [MONDO:MONDO:0011551,MedGen:C2673535,OMIM:605407,Orphanet:101150] |
|
rs1555015018
|
Likely pathogenic |
Pyruvate carboxylase deficiency [MONDO:MONDO:0009949,MedGen:C0034341,OMIM:266150,Orphanet:3008] |
|
rs1555028104
|
US |
Intellectual developmental disorder, autosomal dominant 51 (MRD51) [MIM:617788] |
|
rs1555203737
|
Pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1555209575
|
Pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1555336810
|
LP/P |
Combined immunodeficiency and megaloblastic anemia with or without hyperhomocysteinemia (CIMAH) [MIM:617780] |
|
rs1555337681
|
Likely pathogenic |
Combined immunodeficiency and megaloblastic anemia with or without hyperhomocysteinemia [MONDO:MONDO:0060611,MedGen:C4540434,OMIM:617780] |
|
rs1555384318
|
Pathogenic |
Galactosylceramide beta-galactosidase deficiency [MONDO:MONDO:0009499,MedGen:C0023521,OMIM:245200,Orphanet:487] |
|
rs1555526214
|
US |
Sporadic cancers |
|
rs1555526226
|
US |
Sporadic cancers |
|
rs1555538148
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs1555538151
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs1555538351
|
- |
- |
|
rs1555622533
|
Likely pathogenic |
Mucopolysaccharidosis, MPS-III-B [MONDO:MONDO:0009656,MedGen:C0086648,OMIM:252920,Orphanet:79270] |
|
rs1555629667
|
- |
- |
|
rs1555632876
|
- |
- |
|
rs1555666392
|
Pathogenic/Likely pathogenic |
Inborn genetic diseases|Baraitser-winter syndrome 2|Neurodevelopmental delay [MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0013812,MedGen:C3281235,OMIM:614583,Orphanet:2995|Human Phenotype Ontology:HP:0012758,MedGen:C4022738] |
|
rs1555666715
|
Likely pathogenic |
Rare genetic deafness|Baraitser-winter syndrome 2|Baraitser-winter syndrome 2 [MedGen:C5680250,Orphanet:96210|MONDO:MONDO:0013812,MedGen:C3281235,OMIM:614583,Orphanet:2995|MONDO:MONDO:0013812,MedGen:C3281235,OMIM:614583,Orphanet:2995]; Autosomal dominant nonsyndromic hearing loss 20 [MONDO:MONDO:0011480,MedGen:C1858172,OMIM:604717,Orphanet:90635] |
|
rs1555668215
|
- |
- |
|
rs1555690779
|
LP/P |
Neurodevelopmental disorder with ataxic gait, absent speech, and decreased cortical white matter (NDAGSCW) [MIM:617807] |
|
rs1555690804
|
LP/P |
Neurodevelopmental disorder with ataxic gait, absent speech, and decreased cortical white matter (NDAGSCW) [MIM:617807] |
|
rs1555695342
|
Pathogenic/Likely pathogenic |
not provided|Lactic acidosis|Mitochondrial complex V (ATP synthase) deficiency, nuclear type 4A [MedGen:C3661900|Human Phenotype Ontology:HP:0003128,Human Phenotype Ontology:HP:0003255,Human Phenotype Ontology:HP:0005960,MONDO:MONDO:0006040,MedGen:C0001125|MONDO:MONDO:0957254,MedGen:C5830480,OMIM:620358] |
|
rs1555702147
|
Pathogenic |
Lobular capillary hemangiomas|Capillary malformation|Segmental undergrowth associated with capillary malformation|CLOVES syndrome|not provided [|Human Phenotype Ontology:HP:0025104,MONDO:MONDO:0016231,MedGen:C0340803,Orphanet:211247||MONDO:MONDO:0013038,MedGen:C2752042,OMIM:612918,Orphanet:140944|MedGen:C3661900] |
|
rs1555748630
|
- |
- |
|
rs1555748926
|
LP/P |
Galactosemia 2 (GALAC2) [MIM:230200] |
|
rs1555762722
|
Likely pathogenic |
Ethylmalonic encephalopathy|Abnormality of the nervous system [MONDO:MONDO:0011229,MedGen:C1865349,OMIM:602473,Orphanet:51188|Human Phenotype Ontology:HP:0000707,Human Phenotype Ontology:HP:0001333,Human Phenotype Ontology:HP:0006987,MONDO:MONDO:0002320,MedGen:C0497552] |
|
rs1555765564
|
LP/P |
Ethylmalonic encephalopathy (EE) [MIM:602473] |
|
rs1555787646
|
Pathogenic |
Pigmentary pallidal degeneration|not provided [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850|MedGen:C3661900] |
|
rs1555787799
|
Pathogenic |
Pigmentary pallidal degeneration [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850] |
|
rs1555874803
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs1555891584
|
Pathogenic |
Pseudohypoparathyroidism type I A [MONDO:MONDO:0007078,MedGen:C3494506,OMIM:103580,Orphanet:79443] |
|
rs1555953548
|
Pathogenic/Likely pathogenic |
Inborn genetic diseases|Intellectual disability, X-linked 102|not provided [MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0010497,MedGen:C5393299,OMIM:300958,Orphanet:457260|MedGen:C3661900] |
|
rs1555954105
|
Pathogenic |
Intellectual disability, X-linked 102 [MONDO:MONDO:0010497,MedGen:C5393299,OMIM:300958,Orphanet:457260] |
|
rs1556381145
|
- |
- |
|
rs1557229416
|
- |
- |
|
rs1557229683
|
LP/P |
Anemia, non-spherocytic hemolytic, due to G6PD deficiency (NSHA) [MIM:300908] |
|
rs1557229736
|
Pathogenic/Likely pathogenic |
Inborn genetic diseases|Anemia, nonspherocytic hemolytic, due to G6PD deficiency [MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0010480,MedGen:C2720289,OMIM:300908,Orphanet:466026] |
|
rs1557230580
|
- |
- |
|
rs1557466604
|
Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs1557548856
|
- |
- |
|
rs1557714302
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs1557776329
|
LP/P |
Cardiomyopathy, dilated, 2C (CMD2C) [MIM:618189] |
|
rs1557778277
|
LP/P |
Cardiomyopathy, dilated, 2C (CMD2C) [MIM:618189] |
|
rs1558081384
|
Likely pathogenic |
Actin accumulation myopathy [MONDO:MONDO:0008070,MedGen:C3711389,OMIM:161800,Orphanet:98904] |
|
rs1558112580
|
- |
- |
|
rs1558201263
|
- |
- |
|
rs1558603396
|
Likely pathogenic |
Glaucoma 3A|Anterior segment dysgenesis 6 [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
rs1558749457
|
Pathogenic |
Congenital myasthenic syndrome 12 [MONDO:MONDO:0012518,MedGen:C3552335,OMIM:610542,Orphanet:353327,Orphanet:590] |
|
rs1558986214
|
LP/P |
Infantile cataract, skin abnormalities, glutamate excess, and impaired intellectual development (CASGID) [MIM:618339] |
|
rs1559142152
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1559720382
|
Pathogenic/Likely pathogenic |
Genetic syndrome with a Dandy-Walker malformation as major feature [MedGen:CN274613]; Luscan-Lumish syndrome [MONDO:MONDO:0014791,MedGen:C4085873,OMIM:616831,Orphanet:597738]; Ventriculomegaly|Dandy-Walker syndrome [Human Phenotype Ontology:HP:0002119,Human Phenotype Ontology:HP:0002447,Human Phenotype Ontology:HP:0005691,Human Phenotype Ontology:HP:0007071,MedGen:C3278923|Human Phenotype Ontology:HP:0001305,Human Phenotype Ontology:HP:0001313,Human Phenotype Ontology:HP:0006809,MONDO:MONDO:0009072,MeSH:D003616,MedGen:C0010964,OMIM:220200,Orphanet:217] |
|
rs1560992565
|
Pathogenic |
Mitochondrial complex II deficiency, nuclear type 1 [MONDO:MONDO:0100294,MedGen:C5700310,OMIM:252011,Orphanet:3208]; Paragangliomas 5|Hereditary cancer-predisposing syndrome|Paragangliomas 5 [MONDO:MONDO:0013602,MedGen:C3279992,OMIM:614165,Orphanet:29072|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0013602,MedGen:C3279992,OMIM:614165,Orphanet:29072] |
|
rs1561442127
|
Likely pathogenic |
Perrault syndrome [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855]; Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs1562711915
|
Pathogenic |
not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1562715426
|
Pathogenic |
not provided|Maturity onset diabetes mellitus in young [MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1562717053
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1562717053
|
Pathogenic |
not provided|Maturity-onset diabetes of the young type 2 [MedGen:C3661900|MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552]; Permanent neonatal diabetes mellitus 1 [MONDO:MONDO:0100165,MedGen:C5393570,OMIM:606176]; Type 2 diabetes mellitus [Human Phenotype Ontology:HP:0005965,Human Phenotype Ontology:HP:0005978,Human Phenotype Ontology:HP:0100652,MONDO:MONDO:0005148,MeSH:D003924,MedGen:C0011860,OMIM:125853]; Hyperinsulinism due to glucokinase deficiency|Monogenic diabetes|Maturity onset diabetes mellitus in young [MONDO:MONDO:0011236,MedGen:C1865290,OMIM:602485,Orphanet:79299|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1562907873
|
Pathogenic |
Cystic fibrosis [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586] |
|
rs1563938450
|
- |
- |
|
rs1564100957
|
Likely pathogenic |
not provided|Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase [MedGen:C3661900|MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239] |
|
rs1564317029
|
- |
- |
|
rs1564328617
|
Likely pathogenic |
Developmental and epileptic encephalopathy, 31|Inborn genetic diseases [MONDO:MONDO:0014598,MedGen:C4225357,OMIM:616346,Orphanet:2382|MeSH:D030342,MedGen:C0950123] |
|
rs1564557037
|
LP/P |
Neurodevelopmental disorder with visual defects and brain anomalies (NEDVIBA) [MIM:618547] |
|
rs1564557037
|
Likely pathogenic |
Neurodevelopmental disorder with visual defects and brain anomalies|Neurodevelopmental abnormality|Charcot-Marie-Tooth disease type 4G [MONDO:MONDO:0032807,MedGen:C5231404,OMIM:618547|Human Phenotype Ontology:HP:0012759,MedGen:C4022737|MONDO:MONDO:0011534,MedGen:C1854449,OMIM:605285,Orphanet:99953] |
|
rs1565288701
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1565291981
|
- |
- |
|
rs1565627526
|
Pathogenic/Likely pathogenic |
Tubulinopathy|Lissencephaly due to TUBA1A mutation [MONDO:MONDO:0100153,MedGen:CN850169|MONDO:MONDO:0012703,MedGen:C4305153,OMIM:611603,Orphanet:171680] |
|
rs1565846805
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1565846863
|
Pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1565846899
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1565866547
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1567876984
|
Pathogenic/Likely pathogenic |
ACOX1-related condition|Mitchell syndrome|not provided|ACOX1-related disorders|Acyl-CoA oxidase deficiency|Inborn genetic diseases [|MONDO:MONDO:0030073,MedGen:C5394554,OMIM:618960|MedGen:C3661900||MONDO:MONDO:0009919,MedGen:C1849678,OMIM:264470,Orphanet:2971|MeSH:D030342,MedGen:C0950123] |
|
rs1568018697
|
Pathogenic; association |
Intellectual disability [Human Phenotype Ontology:HP:0000730,Human Phenotype Ontology:HP:0001249,Human Phenotype Ontology:HP:0001267,Human Phenotype Ontology:HP:0001286,Human Phenotype Ontology:HP:0002122,Human Phenotype Ontology:HP:0002192,Human Phenotype Ontology:HP:0002316,Human Phenotype Ontology:HP:0002382,Human Phenotype Ontology:HP:0002386,Human Phenotype Ontology:HP:0002402,Human Phenotype Ontology:HP:0002458,Human Phenotype Ontology:HP:0002482,Human Phenotype Ontology:HP:0002499,Human Phenotype Ontology:HP:0002543,Human Phenotype Ontology:HP:0003767,Human Phenotype Ontology:HP:0006833,Human Phenotype Ontology:HP:0007154,Human Phenotype Ontology:HP:0007176,Human Phenotype Ontology:HP:0007180,MONDO:MONDO:0001071,MeSH:D008607,MedGen:C3714756]; Abnormal brain morphology|Neurodevelopmental disorder with structural brain anomalies and dysmorphic facies [Human Phenotype Ontology:HP:0012443,MedGen:C4021085|MONDO:MONDO:0032820,MedGen:C5231416,OMIM:618577] |
|
rs1568021957
|
- |
- |
|
rs1568409626
|
Likely pathogenic |
Hypomyelinating leukodystrophy 6 [MONDO:MONDO:0012905,MedGen:C2676244,OMIM:612438,Orphanet:139441] |
|
rs1568575271
|
Likely pathogenic |
Pigmentary pallidal degeneration [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850] |
|
rs1569006974
|
- |
- |
|
rs1569240005
|
Pathogenic |
Intellectual disability, X-linked 102 [MONDO:MONDO:0010497,MedGen:C5393299,OMIM:300958,Orphanet:457260]; Cerebellar vermis hypoplasia|Congenital cerebellar hypoplasia|not provided [Human Phenotype Ontology:HP:0001320,MedGen:C1840379|MONDO:MONDO:0008939,MedGen:C5231391,OMIM:213000,Orphanet:1398,Orphanet:2246|MedGen:CN517202] |
|
rs1570876467
|
Pathogenic/Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs1571893319
|
Pathogenic |
Actin accumulation myopathy [MONDO:MONDO:0008070,MedGen:C3711389,OMIM:161800,Orphanet:98904] |
|
rs1571893383
|
Pathogenic |
Actin accumulation myopathy [MONDO:MONDO:0008070,MedGen:C3711389,OMIM:161800,Orphanet:98904] |
|
rs1573369925
|
Pathogenic |
Mitochondrial DNA depletion syndrome 9 [MONDO:MONDO:0009504,MedGen:C3151476,OMIM:245400,Orphanet:17] |
|
rs1574586310
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1574646079
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1579903197
|
Likely pathogenic |
Succinyl-CoA acetoacetate transferase deficiency [MONDO:MONDO:0009492,MedGen:C0342792,OMIM:245050,Orphanet:832] |
|
rs1581526962
|
Pathogenic |
Complex cortical dysplasia with other brain malformations 7|not provided [MONDO:MONDO:0012399,MedGen:C3552236,OMIM:610031,Orphanet:300573|MedGen:CN517202] |
|
rs1583591303
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1583599303
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs1583599303
|
Pathogenic/Likely pathogenic/Likely risk allele |
not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs1584261979
|
Pathogenic |
Baraitser-Winter syndrome 1 [MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995] |
|
rs1584459666
|
Pathogenic |
Congenital microcephaly - severe encephalopathy - progressive cerebral atrophy syndrome [MONDO:MONDO:0014258,MedGen:C3809971,OMIM:615574,Orphanet:391376] |
|
rs1584793633
|
Likely pathogenic |
Cystic fibrosis [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586] |
|
rs1584875099
|
Likely pathogenic |
Weaver syndrome [MONDO:MONDO:0010193,MedGen:C0265210,OMIM:277590,Orphanet:3447] |
|
rs1585237892
|
Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs1586033745
|
LP/P |
Hemolytic anemia due to glutathione reductase deficiency (HAGRD) [MIM:618660] |
|
rs1588270347
|
Likely pathogenic |
Oocyte maturation defect 2 [MONDO:MONDO:0021573,MedGen:C4225210,OMIM:616780] |
|
rs1589387419
|
Likely pathogenic |
Adenosine kinase deficiency [MONDO:MONDO:0100255,MedGen:C4706555,OMIM:614300,Orphanet:289290,Orphanet:88616] |
|
rs1589590737
|
Pathogenic/Likely pathogenic |
Syndromic retinitis pigmentosa|Microcephaly with or without chorioretinopathy, lymphedema, or intellectual disability [MedGen:C5680332,Orphanet:98661|MONDO:MONDO:0007918,MedGen:C1835265,OMIM:152950,Orphanet:2526] |
|
rs1589792804
|
Likely pathogenic |
Costello syndrome [MONDO:MONDO:0009026,MedGen:C0587248,OMIM:218040,Orphanet:3071] |
|
rs1590007244
|
Pathogenic |
Cutaneous porphyria [MONDO:MONDO:0009902,MedGen:C0162530,OMIM:263700,Orphanet:79277] |
|
rs1591363715
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1591363760
|
Pathogenic/Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1591363786
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1591367592
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1591374629
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1591374632
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs1592988883
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs1594422676
|
LP/P |
Neuronopathy, distal hereditary motor, 6 (HMN6) [MIM:604320] |
|
rs1594427504
|
Likely pathogenic |
not provided|Purine-nucleoside phosphorylase deficiency [MedGen:CN517202|MONDO:MONDO:0013171,MedGen:C0268125,OMIM:613179,Orphanet:760] |
|
rs1595802191
|
Pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
rs1595894742
|
Likely pathogenic |
Tyrosinemia type I [MONDO:MONDO:0010161,MedGen:C0268490,OMIM:276700,Orphanet:882] |
|
rs1596232266
|
Pathogenic |
Bloom syndrome|Hereditary cancer-predisposing syndrome [MONDO:MONDO:0008876,MedGen:C0005859,OMIM:210900,Orphanet:125|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] |
|
rs1597439028
|
Pathogenic |
Spongy degeneration of central nervous system|Inborn genetic diseases [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141|MeSH:D030342,MedGen:C0950123] |
|
rs1598551290
|
Pathogenic/Likely pathogenic |
Autosomal dominant nonsyndromic hearing loss 20|not provided|Autosomal dominant nonsyndromic hearing loss 20 [MONDO:MONDO:0011480,MedGen:C1858172,OMIM:604717,Orphanet:90635|MedGen:C3661900|MONDO:MONDO:0011480,MedGen:C1858172,OMIM:604717,Orphanet:90635]; Baraitser-winter syndrome 2 [MONDO:MONDO:0013812,MedGen:C3281235,OMIM:614583,Orphanet:2995] |
|
rs1600158346
|
LP/P |
Cerebral creatine deficiency syndrome 2 (CCDS2) [MIM:612736] |
|
rs1600158346
|
Likely pathogenic |
Deficiency of guanidinoacetate methyltransferase|Cerebral creatine deficiency syndrome|not specified [MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382|MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172|MedGen:CN169374] |
|
rs1600158570
|
Pathogenic |
Cerebral creatine deficiency syndrome [MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172] |
|
rs1600509558
|
Likely pathogenic |
Developmental and epileptic encephalopathy, 35 [MONDO:MONDO:0014719,MedGen:C4225256,OMIM:616647,Orphanet:457375] |
|
rs1601552154
|
Pathogenic |
Adenylosuccinate lyase deficiency [MONDO:MONDO:0007068,MedGen:C0268126,OMIM:103050,Orphanet:46] |
|
rs1601586359
|
Pathogenic/Likely pathogenic |
Adenylosuccinate lyase deficiency [MONDO:MONDO:0007068,MedGen:C0268126,OMIM:103050,Orphanet:46] |
|
rs1602210346
|
Pathogenic |
Syndromic X-linked intellectual disability Snyder type [MONDO:MONDO:0010664,MedGen:C0796160,OMIM:309583,Orphanet:3063] |
|
rs1602426573
|
Likely pathogenic |
HSD10 mitochondrial disease [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295] |
|
rs1638619737
|
Likely pathogenic |
Deficiency of hydroxymethylglutaryl-CoA lyase [MONDO:MONDO:0009520,MedGen:C0268601,OMIM:246450,Orphanet:20] |
|
rs1641702737
|
Likely pathogenic |
Leber congenital amaurosis 9 [MONDO:MONDO:0012056,MedGen:C1837873,OMIM:608553,Orphanet:65] |
|
rs1641789657
|
Likely pathogenic |
Leber congenital amaurosis 9 [MONDO:MONDO:0012056,MedGen:C1837873,OMIM:608553,Orphanet:65] |
|
rs1641966303
|
Likely pathogenic |
Leber congenital amaurosis 9 [MONDO:MONDO:0012056,MedGen:C1837873,OMIM:608553,Orphanet:65] |
|
rs1641967500
|
Likely pathogenic |
Leber congenital amaurosis 9 [MONDO:MONDO:0012056,MedGen:C1837873,OMIM:608553,Orphanet:65] |
|
rs1644355976
|
Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395] |
|
rs1649619197
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs1651731153
|
Pathogenic |
not provided|Familial hemiplegic migraine [MedGen:C3661900|MONDO:MONDO:0000700,MedGen:C0338484,OMIM:PS141500] |
|
rs1652875135
|
Likely pathogenic |
3-hydroxy-3-methylglutaryl-CoA synthase deficiency [MONDO:MONDO:0011614,MedGen:C2751532,OMIM:605911,Orphanet:35701] |
|
rs1659986226
|
Pathogenic |
Actin accumulation myopathy [MONDO:MONDO:0008070,MedGen:C3711389,OMIM:161800,Orphanet:98904] |
|
rs1661796496
|
Likely pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs1662641467
|
Likely pathogenic |
Methylcobalamin deficiency type cblG [MONDO:MONDO:0009609,MedGen:C1855128,OMIM:250940,Orphanet:2170,Orphanet:622] |
|
rs1671854827
|
Likely pathogenic |
Hypomyelinating leukodystrophy 10 [MONDO:MONDO:0014632,MedGen:C4225332,OMIM:616420] |
|
rs1695
|
LB/B |
- |
|
rs16952692
|
LB/B |
- |
|
rs1698686495
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1698754274
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1698933356
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1699002261
|
Likely pathogenic |
GM1 gangliosidosis type 3 [MONDO:MONDO:0009262,MedGen:C0268273,OMIM:230650,Orphanet:79257]; GM1 gangliosidosis type 2 [MONDO:MONDO:0009261,MedGen:C0268272,OMIM:230600,Orphanet:354,Orphanet:79256]; Infantile GM1 gangliosidosis [MONDO:MONDO:0009260,MedGen:C0268271,OMIM:230500,Orphanet:354,Orphanet:79255] |
|
rs1699791081
|
Likely pathogenic |
GM1 gangliosidosis [MONDO:MONDO:0018149,MedGen:C0085131,Orphanet:354]; Mucopolysaccharidosis, MPS-IV-B [MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582] |
|
rs17004876
|
LB/B |
- |
|
rs1700715255
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1700881929
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1701171267
|
Pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1701172643
|
Likely pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs1702209367
|
Pathogenic |
Deficiency of hyaluronoglucosaminidase [MONDO:MONDO:0011093,MedGen:C1291490,OMIM:601492,Orphanet:67041] |
|
rs1702209886
|
Pathogenic |
Deficiency of hyaluronoglucosaminidase [MONDO:MONDO:0011093,MedGen:C1291490,OMIM:601492,Orphanet:67041] |
|
rs17110563
|
LB/B |
- |
|
rs17134592
|
- |
- |
|
rs1715120049
|
Pathogenic |
Mucopolysaccharidosis type 1|Hurler syndrome [MONDO:MONDO:0001586,MedGen:C0023786,Orphanet:579|Human Phenotype Ontology:HP:0000943,MONDO:MONDO:0011758,MedGen:C0086795,OMIM:607014,Orphanet:93473] |
|
rs17153561
|
LB/B |
- |
|
rs17173752
|
LB/B |
- |
|
rs1726909627
|
Pathogenic |
Rauch-Steindl syndrome [MONDO:MONDO:0859219,MedGen:C5562061,OMIM:619695] |
|
rs1740231
|
LB/B |
- |
|
rs1749652247
|
Likely pathogenic |
Sandhoff disease [MONDO:MONDO:0010006,MedGen:C0036161,OMIM:268800,Orphanet:796] |
|
rs1749878115
|
Pathogenic/Likely pathogenic |
Perrault syndrome 1|Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0009300,MedGen:C4551721,OMIM:233400,Orphanet:2855|MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300]; Perrault syndrome|Bifunctional peroxisomal enzyme deficiency [MONDO:MONDO:0017312,MedGen:C0685838,OMIM:PS233400,Orphanet:2855|MONDO:MONDO:0009855,MedGen:C0342870,OMIM:261515,Orphanet:300] |
|
rs1750309299
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1750388096
|
Likely pathogenic |
Pyridoxine-dependent epilepsy [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs1757276859
|
Likely pathogenic |
Complex cortical dysplasia with other brain malformations 7 [MONDO:MONDO:0012399,MedGen:C3552236,OMIM:610031,Orphanet:300573] |
|
rs1757279879
|
Likely pathogenic |
Lissencephaly [Human Phenotype Ontology:HP:0001339,Human Phenotype Ontology:HP:0002537,MONDO:MONDO:0018838,MedGen:C0266463,OMIM:PS607432,Orphanet:48471] |
|
rs1759551453
|
Likely pathogenic |
Sotos syndrome [MedGen:C0175695,OMIM:117550,Orphanet:821] |
|
rs17624
|
LB/B |
- |
|
rs1764675543
|
Pathogenic |
Succinate-semialdehyde dehydrogenase deficiency [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22] |
|
rs1773910245
|
Likely pathogenic |
Arginase deficiency [MONDO:MONDO:0008814,MedGen:C0268548,OMIM:207800,Orphanet:90] |
|
rs1776147010
|
Likely pathogenic |
Multiple benign circumferential skin creases on limbs 1 [MONDO:MONDO:0020738,MedGen:C4551592,OMIM:156610] |
|
rs17843776
|
- |
- |
|
rs1784814961
|
Likely pathogenic |
Baraitser-Winter syndrome 1 [MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995] |
|
rs1784829872
|
Likely pathogenic |
Baraitser-Winter syndrome 1|not provided [MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995|MedGen:CN517202] |
|
rs17848945
|
- |
- |
|
rs17851045
|
US |
Lung carcinoma |
|
rs17851045
|
Pathogenic/Likely pathogenic |
Lung adenocarcinoma|B-cell chronic lymphocytic leukemia|Transitional cell carcinoma of the bladder|Pancreatic adenocarcinoma|Squamous cell lung carcinoma|Multiple myeloma|Acute myeloid leukemia|Neoplasm of the large intestine|Malignant melanoma of skin|Thyroid tumor|Hepatocellular carcinoma|Malignant neoplasm of body of uterus|Gastric adenocarcinoma|Cerebral arteriovenous malformation|Non-small cell lung carcinoma [Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MedGen:C0153574|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0002408,MONDO:MONDO:0007154,MedGen:C0917804,OMIM:108010,Orphanet:46724|Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131] |
|
rs17853396
|
LB/B |
- |
|
rs17855424
|
LB/B |
- |
|
rs17856552
|
- |
- |
|
rs1788434338
|
Likely pathogenic |
Neurodevelopmental disorder|Neurodevelopmental disorder with hypotonia, impaired speech, and behavioral abnormalities [MONDO:MONDO:0700092,MeSH:D065886,MedGen:C1535926|MONDO:MONDO:0859243,MedGen:C5676975,OMIM:619854] |
|
rs17884712
|
LB/B |
- |
|
rs1788864590
|
Pathogenic |
not provided|Neurodevelopmental disorder with hypotonia, impaired speech, and behavioral abnormalities [MedGen:C3661900|MONDO:MONDO:0859243,MedGen:C5676975,OMIM:619854] |
|
rs1799216615
|
Likely pathogenic |
Cystic fibrosis [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586] |
|
rs1800089
|
LB/B |
- |
|
rs1800299
|
LB/B |
- |
|
rs1801266
|
- |
- |
|
rs180177155
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177156
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177156
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs180177157
|
- |
- |
|
rs180177157
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177161
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177162
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177163
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177173
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177181
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177182
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177184
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177184
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs180177185
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177186
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177189
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177191
|
- |
- |
|
rs180177191
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177195
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177197
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177198
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177199
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177202
|
Pathogenic |
Primary hyperoxaluria, type I|Primary hyperoxaluria|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416|MedGen:C3661900] |
|
rs180177203
|
Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177208
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177210
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177211
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177214
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177217
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177225
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177236
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177238
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs180177243
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177244
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177247
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177248
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177248
|
Pathogenic |
Primary hyperoxaluria, type I|not provided|Primary hyperoxaluria [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416] |
|
rs180177250
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177252
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177253
|
- |
- |
|
rs180177253
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177259
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177262
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177263
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177264
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177269
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177272
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177277
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177279
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177284
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177287
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177288
|
Pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177289
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177290
|
- |
- |
|
rs180177290
|
LP/P |
Hyperoxaluria primary 1 (HP1) [MIM:259900] |
|
rs180177292
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs180177303
|
Pathogenic |
Primary hyperoxaluria, type I|not provided [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598|MedGen:C3661900] |
|
rs180177312
|
Likely pathogenic |
Primary hyperoxaluria, type II [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599] |
|
rs180177314
|
Pathogenic |
Primary hyperoxaluria, type II|Primary hyperoxaluria|not provided [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599|MONDO:MONDO:0002474,MedGen:C0020501,OMIM:PS259900,Orphanet:416|MedGen:C3661900] |
|
rs180177322
|
- |
- |
|
rs180177322
|
Pathogenic/Likely pathogenic |
Primary hyperoxaluria, type II|not provided [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599|MedGen:C3661900] |
|
rs180177323
|
Likely pathogenic |
Primary hyperoxaluria, type II [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599] |
|
rs1805073
|
- |
- |
|
rs1805074
|
- |
- |
|
rs1810791017
|
Likely pathogenic |
Squalene synthase deficiency [MONDO:MONDO:0032566,MedGen:C4748427,OMIM:618156] |
|
rs181309650
|
- |
- |
|
rs1815413655
|
LP/P |
Vitamin D-dependent rickets 3 (VDDR3) [MIM:619073] |
|
rs181651478
|
- |
- |
|
rs1816901292
|
Likely pathogenic |
not provided|Deficiency of steroid 11-beta-monooxygenase [MedGen:C3661900|MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795] |
|
rs1817612031
|
Pathogenic/Likely pathogenic |
not provided|Corticosterone 18-monooxygenase deficiency [MedGen:C3661900|MONDO:MONDO:0008751,MedGen:C0268293,OMIM:203400,Orphanet:427]; Corticosterone methyloxidase type 2 deficiency [MONDO:MONDO:0012524,MedGen:C3463917,OMIM:610600,Orphanet:427] |
|
rs181764014
|
- |
- |
|
rs1823086297
|
Likely pathogenic |
Primary hyperoxaluria, type II [MONDO:MONDO:0009824,MedGen:C0268165,OMIM:260000,Orphanet:416,Orphanet:93599] |
|
rs182600362
|
- |
- |
|
rs1827482942
|
Likely pathogenic |
3-methylglutaconic aciduria type 1 [MONDO:MONDO:0009610,MedGen:C0342727,OMIM:250950,Orphanet:67046] |
|
rs1828723406
|
US |
Inclusion body myopathy with early-onset Paget disease with or without frontotemporal dementia 1 (IBMPFD1) [MIM:167320] |
|
rs182887196
|
- |
- |
|
rs182923857
|
LP/P |
Maple syrup urine disease 1A (MSUD1A) [MIM:248600] |
|
rs182983506
|
LP/P |
Ethylmalonic encephalopathy (EE) [MIM:602473] |
|
rs1831150965
|
Likely pathogenic |
Hereditary fructosuria [Human Phenotype Ontology:HP:0005973,MONDO:MONDO:0009249,MedGen:C0016751,OMIM:229600,Orphanet:469] |
|
rs1832269
|
- |
- |
|
rs1833622746
|
Likely pathogenic |
Developmental and epileptic encephalopathy, 31 [MONDO:MONDO:0014598,MedGen:C4225357,OMIM:616346,Orphanet:2382] |
|
rs1834382153
|
Likely pathogenic |
Oocyte maturation defect 2 [MONDO:MONDO:0021573,MedGen:C4225210,OMIM:616780] |
|
rs1834792032
|
Likely pathogenic |
Developmental and epileptic encephalopathy, 31 [MONDO:MONDO:0014598,MedGen:C4225357,OMIM:616346,Orphanet:2382] |
|
rs183618664
|
- |
- |
|
rs184074326
|
- |
- |
|
rs1844517913
|
Likely pathogenic |
Microcephaly with or without chorioretinopathy, lymphedema, or intellectual disability [MONDO:MONDO:0007918,MedGen:C1835265,OMIM:152950,Orphanet:2526] |
|
rs1845507027
|
Pathogenic/Likely pathogenic |
Citrullinemia|Citrullinemia type I [Human Phenotype Ontology:HP:0032397,MONDO:MONDO:0015991,MedGen:C0175683,Orphanet:187|MONDO:MONDO:0008988,MedGen:C4721769,OMIM:215700,Orphanet:247525] |
|
rs184571563
|
- |
- |
|
rs184615614
|
- |
- |
|
rs184618766
|
- |
- |
|
rs184658792
|
- |
- |
|
rs186544262
|
- |
- |
|
rs186875136
|
- |
- |
|
rs1874693635
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs1877437661
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs1886145312
|
Likely pathogenic |
Galactosylceramide beta-galactosidase deficiency [MONDO:MONDO:0009499,MedGen:C0023521,OMIM:245200,Orphanet:487] |
|
rs1887277350
|
Likely pathogenic |
Galactosylceramide beta-galactosidase deficiency [MONDO:MONDO:0009499,MedGen:C0023521,OMIM:245200,Orphanet:487] |
|
rs188888716
|
- |
- |
|
rs188934928
|
LB/B |
- |
|
rs1889443535
|
LP/P |
Fanconi renotubular syndrome 1 (FRTS1) [MIM:134600] |
|
rs1891497352
|
Pathogenic |
Myopathy, distal, 5 [MONDO:MONDO:0014877,MedGen:C5567521,OMIM:617030,Orphanet:482601] |
|
rs189221845
|
- |
- |
|
rs1896092339
|
Pathogenic |
Bloom syndrome [MONDO:MONDO:0008876,MedGen:C0005859,OMIM:210900,Orphanet:125] |
|
rs189919790
|
- |
- |
|
rs190087897
|
- |
- |
|
rs190285241
|
- |
- |
|
rs190292776
|
- |
- |
|
rs190776413
|
- |
- |
|
rs190803777
|
- |
- |
|
rs1909055807
|
LP/P |
Adenine phosphoribosyltransferase deficiency (APRTD) [MIM:614723] |
|
rs1909056519
|
Likely pathogenic |
Adenine phosphoribosyltransferase deficiency [MONDO:MONDO:0013869,MedGen:C0268120,OMIM:614723,Orphanet:976] |
|
rs1909057323
|
Pathogenic |
Adenine phosphoribosyltransferase deficiency [MONDO:MONDO:0013869,MedGen:C0268120,OMIM:614723,Orphanet:976] |
|
rs1909078308
|
Pathogenic |
Adenine phosphoribosyltransferase deficiency [MONDO:MONDO:0013869,MedGen:C0268120,OMIM:614723,Orphanet:976] |
|
rs1909147057
|
Pathogenic |
Adenine phosphoribosyltransferase deficiency [MONDO:MONDO:0013869,MedGen:C0268120,OMIM:614723,Orphanet:976] |
|
rs1909160707
|
Likely pathogenic |
Adenine phosphoribosyltransferase deficiency [MONDO:MONDO:0013869,MedGen:C0268120,OMIM:614723,Orphanet:976] |
|
rs191644614
|
- |
- |
|
rs192154563
|
LB/B |
- |
|
rs192178446
|
- |
- |
|
rs192453247
|
- |
- |
|
rs1924648986
|
Likely pathogenic |
Syndromic X-linked intellectual disability Snyder type [MONDO:MONDO:0010664,MedGen:C0796160,OMIM:309583,Orphanet:3063] |
|
rs1924650670
|
Pathogenic |
Syndromic X-linked intellectual disability Snyder type [MONDO:MONDO:0010664,MedGen:C0796160,OMIM:309583,Orphanet:3063] |
|
rs192535553
|
- |
- |
|
rs1928132914
|
Likely pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs1928137126
|
Likely pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs1928189534
|
Pathogenic |
Fabry disease|not provided [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324|MedGen:C3661900] |
|
rs1928195468
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs192820773
|
- |
- |
|
rs192831239
|
US |
Phosphoribosylaminoimidazole carboxylase deficiency (PAICSD) [MIM:619859] |
|
rs1928326804
|
Pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs1928406948
|
Likely pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs193921147
|
LP/P |
Weaver syndrome (WVS) [MIM:277590] |
|
rs193922272
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs193922281
|
Pathogenic/Likely pathogenic |
Maturity-onset diabetes of the young type 2|not provided|Maturity onset diabetes mellitus in young [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs193922282
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs193922282
|
LP/P |
Diabetes mellitus, permanent neonatal, 1 (PNDM1) [MIM:606176] |
|
rs193922290
|
Likely pathogenic/Likely risk allele |
Maturity-onset diabetes of the young type 2|Maturity onset diabetes mellitus in young [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs193922297
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs193922303
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs193922311
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs193922319
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2|Maturity onset diabetes mellitus in young|Monogenic diabetes [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs193922327
|
Pathogenic/Likely pathogenic |
Maturity-onset diabetes of the young type 2|not provided [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MedGen:C3661900] |
|
rs193922500
|
Pathogenic |
Cystic fibrosis|Hereditary pancreatitis [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586|MONDO:MONDO:0008185,MedGen:C0238339,OMIM:167800,Orphanet:676]; Cystic fibrosis [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586]; Bronchiectasis with or without elevated sweat chloride 1 [MONDO:MONDO:0008887,MedGen:C2749757,OMIM:211400,Orphanet:60033]; Congenital bilateral aplasia of vas deferens from CFTR mutation|Cystic fibrosis [MONDO:MONDO:0010178,MedGen:C0403814,OMIM:277180,Orphanet:48|MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586]; Congenital bilateral aplasia of vas deferens from CFTR mutation|CFTR-related disorders [MONDO:MONDO:0010178,MedGen:C0403814,OMIM:277180,Orphanet:48|]; Cystic fibrosis|not provided|not specified|Congenital bilateral aplasia of vas deferens from CFTR mutation|Bronchiectasis with or without elevated sweat chloride 1 [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586|MedGen:C3661900|MedGen:CN169374|MONDO:MONDO:0010178,MedGen:C0403814,OMIM:277180,Orphanet:48|MONDO:MONDO:0008887,MedGen:C2749757,OMIM:211400,Orphanet:60033] |
|
rs1942171146
|
Likely pathogenic |
Lissencephaly due to TUBA1A mutation [MONDO:MONDO:0012703,MedGen:C4305153,OMIM:611603,Orphanet:171680] |
|
rs1942187200
|
Likely pathogenic |
Lissencephaly due to TUBA1A mutation [MONDO:MONDO:0012703,MedGen:C4305153,OMIM:611603,Orphanet:171680] |
|
rs1950902
|
- |
- |
|
rs1952694899
|
Pathogenic |
Encephalopathy, lethal, due to defective mitochondrial peroxisomal fission 1 [MONDO:MONDO:0013726,MedGen:C3280660,OMIM:614388,Orphanet:330050] |
|
rs1982601982
|
Likely pathogenic |
Classic homocystinuria [MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394] |
|
rs199475567
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs199475579
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs199475580
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs199475582
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs199475598
|
LP/P |
Hyperphenylalaninemia (HPA) [MIM:261600] |
|
rs199475610
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs199475630
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs199475634
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs199475639
|
Pathogenic |
not provided|Phenylketonuria [MedGen:CN517202|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs199475643
|
LP/P |
Hyperphenylalaninemia (HPA) [MIM:261600] |
|
rs199475651
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs199475654
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs199475660
|
Pathogenic/Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs199475678
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs199476142
|
Pathogenic/Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|Neural tube defects, folate-sensitive [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
rs199518994
|
- |
- |
|
rs199524907
|
Pathogenic/Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase|not provided [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134|MedGen:C3661900] |
|
rs199531230
|
- |
- |
|
rs199532729
|
- |
- |
|
rs199535572
|
- |
- |
|
rs199549932
|
- |
- |
|
rs199554283
|
- |
- |
|
rs199558694
|
- |
- |
|
rs199564842
|
- |
- |
|
rs199578185
|
LP/P |
GM2-gangliosidosis 1 (GM2G1) [MIM:272800] |
|
rs199586854
|
- |
- |
|
rs199587895
|
LP/P |
3-hydroxy-3-methylglutaryl-CoA lyase deficiency (HMGCLD) [MIM:246450] |
|
rs199612297
|
- |
- |
|
rs199624420
|
- |
- |
|
rs199644243
|
- |
- |
|
rs199682939
|
- |
- |
|
rs199693212
|
- |
- |
|
rs199695749
|
- |
- |
|
rs199706529
|
LP/P |
Epileptic encephalopathy, infantile or early childhood, 1 (IECEE1) [MIM:617711] |
|
rs199710929
|
- |
- |
|
rs199740965
|
- |
- |
|
rs199761904
|
- |
- |
|
rs199845096
|
- |
- |
|
rs199878471
|
- |
- |
|
rs199897325
|
- |
- |
|
rs199925121
|
- |
- |
|
rs199943173
|
- |
- |
|
rs199973851
|
- |
- |
|
rs200000745
|
- |
- |
|
rs200004457
|
- |
- |
|
rs200010374
|
- |
- |
|
rs200017623
|
- |
- |
|
rs200030276
|
Likely pathogenic |
3-methylglutaconic aciduria type 1 [MONDO:MONDO:0009610,MedGen:C0342727,OMIM:250950,Orphanet:67046] |
|
rs200046910
|
- |
- |
|
rs200052639
|
- |
- |
|
rs200086262
|
Pathogenic |
Developmental and epileptic encephalopathy, 35|Inosine triphosphatase deficiency|not provided [MONDO:MONDO:0014719,MedGen:C4225256,OMIM:616647,Orphanet:457375|MONDO:MONDO:0013461,MedGen:C0342800,OMIM:613850|MedGen:C3661900] |
|
rs200100285
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs200137991
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs200137991
|
Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|not provided|Neural tube defects, folate-sensitive [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MedGen:C3661900|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
rs200166209
|
- |
- |
|
rs200183364
|
- |
- |
|
rs200185120
|
- |
- |
|
rs200189529
|
Likely pathogenic |
Deficiency of hydroxymethylglutaryl-CoA lyase [MONDO:MONDO:0009520,MedGen:C0268601,OMIM:246450,Orphanet:20] |
|
rs200195789
|
- |
- |
|
rs200196486
|
- |
- |
|
rs200204024
|
- |
- |
|
rs200207185
|
- |
- |
|
rs200217031
|
- |
- |
|
rs200244541
|
- |
- |
|
rs200266956
|
- |
- |
|
rs200290145
|
- |
- |
|
rs200322717
|
- |
- |
|
rs200346442
|
- |
- |
|
rs200366828
|
LP/P |
Acyl-CoA dehydrogenase very long-chain deficiency (ACADVLD) [MIM:201475] |
|
rs200444143
|
- |
- |
|
rs200444143
|
Pathogenic |
not provided|Cerebral creatine deficiency syndrome|Deficiency of guanidinoacetate methyltransferase [MedGen:C3661900|MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172|MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382] |
|
rs200462235
|
- |
- |
|
rs200478856
|
- |
- |
|
rs200513715
|
- |
- |
|
rs200520127
|
- |
- |
|
rs200529020
|
Likely pathogenic |
Primary hyperoxaluria type 3 [MONDO:MONDO:0013327,MedGen:C3150878,OMIM:613616,Orphanet:416,Orphanet:93600] |
|
rs200543916
|
- |
- |
|
rs200544560
|
- |
- |
|
rs200556774
|
- |
- |
|
rs200596734
|
- |
- |
|
rs200600524
|
- |
- |
|
rs200602157
|
- |
- |
|
rs200630872
|
- |
- |
|
rs200635241
|
- |
- |
|
rs200637968
|
- |
- |
|
rs200688214
|
Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|not provided [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MedGen:C3661900] |
|
rs200707504
|
- |
- |
|
rs200730776
|
- |
- |
|
rs200755203
|
- |
- |
|
rs200775885
|
- |
- |
|
rs200790521
|
- |
- |
|
rs200833152
|
LB/B |
- |
|
rs200840955
|
- |
- |
|
rs200842352
|
- |
- |
|
rs200861229
|
- |
- |
|
rs200893629
|
- |
- |
|
rs200908381
|
- |
- |
|
rs200913020
|
- |
- |
|
rs200940532
|
- |
- |
|
rs200955062
|
- |
- |
|
rs200965026
|
- |
- |
|
rs200971951
|
- |
- |
|
rs201022112
|
- |
- |
|
rs201023253
|
- |
- |
|
rs201037118
|
- |
- |
|
rs201045618
|
- |
- |
|
rs201047833
|
- |
- |
|
rs201053542
|
Pathogenic |
Progressive myoclonic epilepsy [MONDO:MONDO:0020074,MedGen:C0751778,OMIM:PS254800,Orphanet:308,Orphanet:98261] |
|
rs201071897
|
- |
- |
|
rs201082751
|
- |
- |
|
rs201128036
|
- |
- |
|
rs201182683
|
- |
- |
|
rs201215269
|
- |
- |
|
rs201215666
|
- |
- |
|
rs201222740
|
- |
- |
|
rs201225516
|
- |
- |
|
rs201232068
|
- |
- |
|
rs201256313
|
- |
- |
|
rs201283535
|
- |
- |
|
rs201286895
|
- |
- |
|
rs201316181
|
LB/B |
- |
|
rs201321507
|
- |
- |
|
rs201354416
|
- |
- |
|
rs201397255
|
- |
- |
|
rs201461737
|
- |
- |
|
rs201477144
|
- |
- |
|
rs201522765
|
- |
- |
|
rs201524044
|
- |
- |
|
rs201535183
|
- |
- |
|
rs201551371
|
- |
- |
|
rs201563672
|
- |
- |
|
rs201596112
|
- |
- |
|
rs201618781
|
- |
- |
|
rs201618781
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs201623252
|
LB/B |
- |
|
rs201623252
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
|
rs201626990
|
- |
- |
|
rs201702426
|
- |
- |
|
rs201745983
|
- |
- |
|
rs201761717
|
- |
- |
|
rs201801746
|
- |
- |
|
rs201823652
|
Pathogenic |
Actin accumulation myopathy [MONDO:MONDO:0008070,MedGen:C3711389,OMIM:161800,Orphanet:98904] |
|
rs201826432
|
LP/P |
Hereditary coproporphyria (HCP) [MIM:121300] |
|
rs201835306
|
- |
- |
|
rs201848142
|
- |
- |
|
rs201849671
|
- |
- |
|
rs201859570
|
- |
- |
|
rs201865375
|
- |
- |
|
rs201865375
|
Pathogenic/Likely pathogenic |
Mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency|not provided [MONDO:MONDO:0014563,MedGen:C4225391,OMIM:616277,Orphanet:255241|MedGen:C3661900] |
|
rs201887670
|
- |
- |
|
rs201894374
|
US |
Developmental and epileptic encephalopathy 84 (DEE84) [MIM:618792] |
|
rs201904403
|
- |
- |
|
rs201907439
|
- |
- |
|
rs201934016
|
- |
- |
|
rs201948406
|
Pathogenic/Likely pathogenic |
Pyridoxine-dependent epilepsy|not provided|Inborn genetic diseases [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs201951824
|
Pathogenic/Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase|See cases|not provided [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708||MedGen:C3661900] |
|
rs201998835
|
- |
- |
|
rs202002774
|
- |
- |
|
rs202015012
|
- |
- |
|
rs202038293
|
- |
- |
|
rs202071047
|
- |
- |
|
rs202090220
|
- |
- |
|
rs202092105
|
- |
- |
|
rs202093592
|
- |
- |
|
rs202097988
|
- |
- |
|
rs202103028
|
LP/P |
Neu-Laxova syndrome 2 (NLS2) [MIM:616038] |
|
rs202107577
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I|Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147|MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
rs202107611
|
- |
- |
|
rs202108064
|
- |
- |
|
rs202168145
|
- |
- |
|
rs202203713
|
- |
- |
|
rs202214913
|
- |
- |
|
rs202226446
|
- |
- |
|
rs202231318
|
- |
- |
|
rs202241708
|
- |
- |
|
rs2031759596
|
Pathogenic |
Microcephaly|Baraitser-winter syndrome 2 [Human Phenotype Ontology:HP:0000252,Human Phenotype Ontology:HP:0001366,Human Phenotype Ontology:HP:0005485,Human Phenotype Ontology:HP:0005489,Human Phenotype Ontology:HP:0005497,MONDO:MONDO:0001149,MedGen:C4551563|MONDO:MONDO:0013812,MedGen:C3281235,OMIM:614583,Orphanet:2995] |
|
rs2032247686
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs2032282970
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs2032293119
|
Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs2037432429
|
US |
Neurodevelopmental disorder with cardiomyopathy, spasticity, and brain abnormalities (NEDCASB) [MIM:619121] |
|
rs2039041225
|
Pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs2039217093
|
Pathogenic/Likely pathogenic |
Glycogen storage disease, type II|not provided [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365|MedGen:C3661900] |
|
rs2043431490
|
Likely pathogenic |
Neurodevelopmental disorder with structural brain anomalies and dysmorphic facies [MONDO:MONDO:0032820,MedGen:C5231416,OMIM:618577] |
|
rs2044180572
|
Pathogenic |
Tyrosinemia type II [MONDO:MONDO:0010160,MedGen:C0268487,OMIM:276600,Orphanet:28378] |
|
rs2058978388
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs2058986411
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs2061598873
|
Likely pathogenic |
Deficiency of galactokinase [MONDO:MONDO:0009255,MedGen:C0268155,OMIM:230200,Orphanet:352,Orphanet:79237] |
|
rs2062351829
|
Likely pathogenic |
Karyomegalic interstitial nephritis [MONDO:MONDO:0013898,MedGen:C3553774,OMIM:614817,Orphanet:401996] |
|
rs2063875155
|
Likely pathogenic |
Intellectual disability, X-linked 102 [MONDO:MONDO:0010497,MedGen:C5393299,OMIM:300958,Orphanet:457260] |
|
rs2063876594
|
Pathogenic |
Intellectual disability, X-linked 102 [MONDO:MONDO:0010497,MedGen:C5393299,OMIM:300958,Orphanet:457260] |
|
rs2063908570
|
Pathogenic |
Intellectual disability, X-linked 102 [MONDO:MONDO:0010497,MedGen:C5393299,OMIM:300958,Orphanet:457260] |
|
rs2063927503
|
Pathogenic |
Intellectual disability, X-linked 102 [MONDO:MONDO:0010497,MedGen:C5393299,OMIM:300958,Orphanet:457260] |
|
rs2066472
|
LB/B |
- |
|
rs2066702
|
LB/B |
- |
|
rs2068485732
|
Pathogenic |
Ornithine carbamoyltransferase deficiency [MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664] |
|
rs2068486155
|
Pathogenic |
Ornithine carbamoyltransferase deficiency [MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664] |
|
rs2068501518
|
Likely pathogenic |
Ornithine carbamoyltransferase deficiency [MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664] |
|
rs2075824424
|
Likely pathogenic |
HSD10 mitochondrial disease [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295] |
|
rs2088732981
|
Likely pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
rs2089059318
|
Likely pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
rs2090674561
|
Likely pathogenic |
Pigmentary pallidal degeneration [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850] |
|
rs2092912895
|
Likely pathogenic |
Mucopolysaccharidosis, MPS-III-B [MONDO:MONDO:0009656,MedGen:C0086648,OMIM:252920,Orphanet:79270] |
|
rs2096273902
|
Likely pathogenic |
not provided|Maturity onset diabetes mellitus in young|Monogenic diabetes [MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs2096278847
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs2096280050
|
US |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs2096281827
|
LP/P |
Maturity-onset diabetes of the young 2 (MODY2) [MIM:125851] |
|
rs2100417374
|
Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs2100417476
|
Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs2100453612
|
Pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs2100499494
|
Pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395] |
|
rs2100779419
|
Pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs2100779875
|
Likely pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs2100797134
|
Pathogenic |
Maple syrup urine disease type 2|Maple syrup urine disease [MONDO:MONDO:0023693,MedGen:C1855371,OMIM:620699|MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs2101738598
|
Likely pathogenic |
Noonan syndrome 6 [MONDO:MONDO:0013186,MedGen:C2750732,OMIM:613224,Orphanet:648] |
|
rs2101742052
|
Pathogenic/Likely pathogenic |
RASopathy|Noonan syndrome and Noonan-related syndrome|not provided|Colorectal cancer|Noonan syndrome 1 [MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391|MONDO:MONDO:0020297,MedGen:C5681679,Orphanet:98733|MedGen:C3661900|MONDO:MONDO:0005575,MedGen:C0346629,OMIM:114500|MONDO:MONDO:0008104,MedGen:C4551602,OMIM:163950,Orphanet:648] |
|
rs2101743991
|
Likely pathogenic |
Noonan syndrome 6 [MONDO:MONDO:0013186,MedGen:C2750732,OMIM:613224,Orphanet:648] |
|
rs2101989829
|
Pathogenic |
Familial hemiplegic migraine [MONDO:MONDO:0000700,MedGen:C0338484,OMIM:PS141500] |
|
rs2102735904
|
Likely pathogenic |
Actin accumulation myopathy [MONDO:MONDO:0008070,MedGen:C3711389,OMIM:161800,Orphanet:98904] |
|
rs2102736408
|
Pathogenic |
Actin accumulation myopathy [MONDO:MONDO:0008070,MedGen:C3711389,OMIM:161800,Orphanet:98904] |
|
rs2105908864
|
Pathogenic/Likely pathogenic |
Congenital hyperammonemia, type I|Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147|MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147]; Pulmonary hypertension, neonatal, susceptibility to|Pulmonary hypertension, neonatal, susceptibility to [MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371|MONDO:MONDO:0014151,MedGen:C3714958,OMIM:615371] |
|
rs2105922857
|
Pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs2105942900
|
Pathogenic |
Congenital hyperammonemia, type I [MONDO:MONDO:0009376,MedGen:C4082171,OMIM:237300,Orphanet:147] |
|
rs2107111037
|
Pathogenic |
Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [MONDO:MONDO:0014335,MedGen:C4014239,OMIM:615760,Orphanet:404437] |
|
rs2108976771
|
Likely pathogenic |
Rauch-Steindl syndrome [MONDO:MONDO:0859219,MedGen:C5562061,OMIM:619695] |
|
rs2109020378
|
Pathogenic |
Rauch-Steindl syndrome [MONDO:MONDO:0859219,MedGen:C5562061,OMIM:619695] |
|
rs2109133174
|
Pathogenic |
Retinitis pigmentosa 40 [MONDO:MONDO:0013429,MedGen:C3151107,OMIM:613801,Orphanet:791] |
|
rs2113785156
|
Likely pathogenic |
not provided|Complex cortical dysplasia with other brain malformations 5 [MedGen:C3661900|MONDO:MONDO:0014337,MedGen:C3810407,OMIM:615763] |
|
rs2114539596
|
Pathogenic/Likely pathogenic |
Arginase deficiency [MONDO:MONDO:0008814,MedGen:C0268548,OMIM:207800,Orphanet:90] |
|
rs2115712676
|
Pathogenic |
Neurodevelopmental disorder with hypotonia, impaired speech, and behavioral abnormalities [MONDO:MONDO:0859243,MedGen:C5676975,OMIM:619854] |
|
rs2115712712
|
Pathogenic |
Neurodevelopmental disorder with hypotonia, impaired speech, and behavioral abnormalities [MONDO:MONDO:0859243,MedGen:C5676975,OMIM:619854] |
|
rs2116052322
|
Likely pathogenic |
Neurodevelopmental disorder with hypotonia, impaired speech, and behavioral abnormalities [MONDO:MONDO:0859243,MedGen:C5676975,OMIM:619854] |
|
rs2116221384
|
Pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs2118276763
|
Pathogenic/Likely pathogenic |
not provided|Sturge-Weber syndrome [MedGen:C3661900|MONDO:MONDO:0008501,MedGen:C0038505,OMIM:185300,Orphanet:3205] |
|
rs2118343224
|
Pathogenic |
Hereditary fructosuria [Human Phenotype Ontology:HP:0005973,MONDO:MONDO:0009249,MedGen:C0016751,OMIM:229600,Orphanet:469] |
|
rs2118444312
|
Pathogenic |
Familial multiple nevi flammei|not provided [MONDO:MONDO:0008094,MedGen:C2931029,OMIM:163000,Orphanet:624|MedGen:C3661900] |
|
rs2121244643
|
Likely pathogenic |
Lissencephaly due to TUBA1A mutation [MONDO:MONDO:0012703,MedGen:C4305153,OMIM:611603,Orphanet:171680] |
|
rs2121245032
|
Pathogenic |
Lissencephaly due to TUBA1A mutation [MONDO:MONDO:0012703,MedGen:C4305153,OMIM:611603,Orphanet:171680] |
|
rs2122346498
|
Pathogenic/Likely pathogenic |
Inosine triphosphatase deficiency|Infantile epileptic dyskinetic encephalopathy [MONDO:MONDO:0013461,MedGen:C0342800,OMIM:613850|MONDO:MONDO:0018226,MedGen:C4552072,Orphanet:364063] |
|
rs2124291450
|
Pathogenic |
Partial hypoxanthine-guanine phosphoribosyltransferase deficiency [MONDO:MONDO:0010299,MedGen:C0268117,OMIM:300323,Orphanet:79233]; Lesch-Nyhan syndrome [MONDO:MONDO:0010298,MedGen:C0023374,OMIM:300322,Orphanet:510] |
|
rs2124302024
|
Pathogenic |
Partial hypoxanthine-guanine phosphoribosyltransferase deficiency [MONDO:MONDO:0010299,MedGen:C0268117,OMIM:300323,Orphanet:79233]; Lesch-Nyhan syndrome [MONDO:MONDO:0010298,MedGen:C0023374,OMIM:300322,Orphanet:510] |
|
rs2124412861
|
Pathogenic |
Lowe syndrome [MONDO:MONDO:0010645,MedGen:C0028860,OMIM:309000,Orphanet:534] |
|
rs2124470378
|
Pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs2124474566
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs2124484378
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs2124851950
|
Likely pathogenic |
Infantile cataract, skin abnormalities, glutamate excess, and impaired intellectual development [MONDO:MONDO:0032685,MedGen:C5193037,OMIM:618339] |
|
rs2125316074
|
Pathogenic/Likely pathogenic |
Glaucoma 3A|Primary congenital glaucoma [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|Human Phenotype Ontology:HP:0008007,MONDO:MONDO:0000365,MedGen:C1533041] |
|
rs2127257578
|
Pathogenic |
Sotos syndrome [MedGen:C0175695,OMIM:117550,Orphanet:821] |
|
rs2127385894
|
Pathogenic |
Succinate-semialdehyde dehydrogenase deficiency [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22] |
|
rs2128820597
|
Pathogenic/Likely pathogenic |
Maturity-onset diabetes of the young type 2|Monogenic diabetes|not provided [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|MedGen:C3661900] |
|
rs2128821509
|
Likely pathogenic |
Maturity-onset diabetes of the young type 2 [MONDO:MONDO:0007453,MedGen:C0342277,OMIM:125851,Orphanet:552] |
|
rs2129467664
|
Pathogenic |
Weaver syndrome [MONDO:MONDO:0010193,MedGen:C0265210,OMIM:277590,Orphanet:3447] |
|
rs2132341560
|
Likely pathogenic |
Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase [MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239] |
|
rs2132792568
|
Pathogenic |
Kleefstra syndrome 1 [MONDO:MONDO:0027407,MedGen:C0795833,OMIM:610253,Orphanet:261494] |
|
rs2133006228
|
Pathogenic |
Sialuria [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166]; GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602] |
|
rs2133273980
|
Likely pathogenic |
Aortic aneurysm, familial thoracic 6 [MONDO:MONDO:0012730,MedGen:C2673186,OMIM:611788] |
|
rs2133777379
|
Pathogenic |
Hyperinsulinism-hyperammonemia syndrome [MONDO:MONDO:0011717,MedGen:C1847555,OMIM:606762,Orphanet:35878] |
|
rs2134768688
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs2134768866
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs2135336400
|
Pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs2135806030
|
Pathogenic |
Noonan syndrome 3 [MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648] |
|
rs2135856711
|
Pathogenic |
Glycogen storage disease, type VII [MONDO:MONDO:0009295,MedGen:C0017926,OMIM:232800,Orphanet:371] |
|
rs2136192612
|
Pathogenic |
Methylmalonic aciduria, cblB type [MONDO:MONDO:0009614,MedGen:C1855102,OMIM:251110,Orphanet:28,Orphanet:79311] |
|
rs2136195113
|
Pathogenic |
Methylmalonic aciduria, cblB type [MONDO:MONDO:0009614,MedGen:C1855102,OMIM:251110,Orphanet:28,Orphanet:79311] |
|
rs2136198139
|
Likely pathogenic |
Methylmalonic aciduria, cblB type [MONDO:MONDO:0009614,MedGen:C1855102,OMIM:251110,Orphanet:28,Orphanet:79311] |
|
rs2136702181
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs2137302207
|
Pathogenic |
Encephalopathy, lethal, due to defective mitochondrial peroxisomal fission 1 [MONDO:MONDO:0013726,MedGen:C3280660,OMIM:614388,Orphanet:330050] |
|
rs2139759522
|
Likely pathogenic |
Galactosylceramide beta-galactosidase deficiency [MONDO:MONDO:0009499,MedGen:C0023521,OMIM:245200,Orphanet:487] |
|
rs2140001660
|
Pathogenic |
Galactosylceramide beta-galactosidase deficiency [MONDO:MONDO:0009499,MedGen:C0023521,OMIM:245200,Orphanet:487] |
|
rs2141079375
|
Pathogenic |
not provided|Aromatase deficiency [MedGen:C3661900|MONDO:MONDO:0013301,MedGen:C1960539,OMIM:613546,Orphanet:91] |
|
rs2141505552
|
Likely pathogenic |
Thyroid cancer, nonmedullary, 1 [MONDO:MONDO:0008567,MedGen:C4721429,OMIM:188550] |
|
rs2143111795
|
Pathogenic |
Mucopolysaccharidosis, MPS-III-B [MONDO:MONDO:0009656,MedGen:C0086648,OMIM:252920,Orphanet:79270]; Charcot-Marie-Tooth disease axonal type 2V [MONDO:MONDO:0014665,MedGen:C5569050,OMIM:616491,Orphanet:447964] |
|
rs2143827215
|
Likely pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs2143857207
|
Pathogenic/Likely pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs2143871845
|
Pathogenic |
Glycogen storage disease, type II [MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs2144637546
|
Pathogenic/Likely pathogenic |
Cerebral creatine deficiency syndrome|Deficiency of guanidinoacetate methyltransferase [MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172|MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382] |
|
rs2145087630
|
Pathogenic |
Spondyloenchondrodysplasia with immune dysregulation [MONDO:MONDO:0011939,MedGen:C1842763,OMIM:607944,Orphanet:1855] |
|
rs2145244734
|
Likely pathogenic |
Hypomyelinating leukodystrophy 6 [MONDO:MONDO:0012905,MedGen:C2676244,OMIM:612438,Orphanet:139441] |
|
rs2145971509
|
Pathogenic |
Dystonia 12 [MONDO:MONDO:0007496,MedGen:C1868681,OMIM:128235,Orphanet:71517] |
|
rs2146005656
|
Likely pathogenic |
Pseudohypoparathyroidism type I A [MONDO:MONDO:0007078,MedGen:C3494506,OMIM:103580,Orphanet:79443] |
|
rs2146018812
|
Pathogenic |
Ethylmalonic encephalopathy [MONDO:MONDO:0011229,MedGen:C1865349,OMIM:602473,Orphanet:51188] |
|
rs2146127288
|
Likely pathogenic |
Infantile cerebellar-retinal degeneration [MONDO:MONDO:0013802,MedGen:C3281192,OMIM:614559,Orphanet:313850] |
|
rs2146270332
|
Pathogenic |
Pseudohypoparathyroidism type I A [MONDO:MONDO:0007078,MedGen:C3494506,OMIM:103580,Orphanet:79443] |
|
rs2146278555
|
Pathogenic/Likely pathogenic |
Pseudohypoparathyroidism type I A|not provided [MONDO:MONDO:0007078,MedGen:C3494506,OMIM:103580,Orphanet:79443|MedGen:C3661900] |
|
rs2146285582
|
Pathogenic/Likely pathogenic |
not provided|Pseudohypoparathyroidism type I A [MedGen:C3661900|MONDO:MONDO:0007078,MedGen:C3494506,OMIM:103580,Orphanet:79443] |
|
rs2146377060
|
Pathogenic |
Macrothrombocytopenia and granulocyte inclusions with or without nephritis or sensorineural hearing loss [MONDO:MONDO:0015912,MedGen:C5200934,OMIM:155100,Orphanet:182050] |
|
rs2146658733
|
Pathogenic |
Adenylosuccinate lyase deficiency [MONDO:MONDO:0007068,MedGen:C0268126,OMIM:103050,Orphanet:46] |
|
rs2146872522
|
Pathogenic |
Pigmentary pallidal degeneration [MONDO:MONDO:0009319,MedGen:C0018523,OMIM:234200,Orphanet:157850] |
|
rs2147342649
|
Pathogenic |
Ornithine carbamoyltransferase deficiency [MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664] |
|
rs2147353543
|
Pathogenic |
not provided|Intellectual disability, X-linked 102 [MedGen:C3661900|MONDO:MONDO:0010497,MedGen:C5393299,OMIM:300958,Orphanet:457260] |
|
rs2147480697
|
Likely pathogenic |
Fabry disease [Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs2147682409
|
Likely pathogenic |
Charcot-Marie-Tooth Neuropathy X|Charcot-Marie-Tooth disease X-linked recessive 5|not provided [MedGen:CN118851|MONDO:MONDO:0010699,MedGen:C1839566,OMIM:311070,Orphanet:99014|MedGen:C3661900] |
|
rs2148328852
|
Pathogenic/Likely pathogenic |
not provided|Anemia, nonspherocytic hemolytic, due to G6PD deficiency [MedGen:C3661900|MONDO:MONDO:0010480,MedGen:C2720289,OMIM:300908,Orphanet:466026] |
|
rs2148328873
|
Likely pathogenic |
Anemia, nonspherocytic hemolytic, due to G6PD deficiency [MONDO:MONDO:0010480,MedGen:C2720289,OMIM:300908,Orphanet:466026] |
|
rs2148424154
|
Pathogenic |
Deficiency of hydroxymethylglutaryl-CoA lyase [MONDO:MONDO:0009520,MedGen:C0268601,OMIM:246450,Orphanet:20] |
|
rs2148425853
|
Pathogenic |
Deficiency of hydroxymethylglutaryl-CoA lyase [MONDO:MONDO:0009520,MedGen:C0268601,OMIM:246450,Orphanet:20] |
|
rs2149109587
|
Pathogenic |
Cutis laxa, X-linked [MONDO:MONDO:0010572,MedGen:C0268353,OMIM:304150,Orphanet:198]; X-linked distal spinal muscular atrophy type 3 [MONDO:MONDO:0010338,MedGen:C1845359,OMIM:300489,Orphanet:139557]; Menkes kinky-hair syndrome|Menkes kinky-hair syndrome [MONDO:MONDO:0010651,MedGen:C0022716,OMIM:309400,Orphanet:565|MONDO:MONDO:0010651,MedGen:C0022716,OMIM:309400,Orphanet:565] |
|
rs2150741844
|
Likely pathogenic |
Spongy degeneration of central nervous system [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141] |
|
rs2150746796
|
Pathogenic |
Spongy degeneration of central nervous system [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141] |
|
rs2150764080
|
Likely pathogenic |
Spongy degeneration of central nervous system [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141] |
|
rs2151019295
|
Pathogenic/Likely pathogenic |
HNSHA due to aldolase A deficiency [MONDO:MONDO:0012747,MedGen:C0272066,OMIM:611881,Orphanet:57] |
|
rs2151162501
|
Pathogenic |
Bloom syndrome [MONDO:MONDO:0008876,MedGen:C0005859,OMIM:210900,Orphanet:125] |
|
rs2153545926
|
Pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs2228307
|
LB/B |
- |
|
rs2233213
|
LB/B |
- |
|
rs2233215
|
LB/B |
- |
|
rs2234622
|
LB/B |
- |
|
rs2234625
|
- |
- |
|
rs2270941
|
- |
- |
|
rs2276724
|
- |
- |
|
rs2289886
|
- |
- |
|
rs2296681
|
- |
- |
|
rs2297950
|
LB/B |
- |
|
rs2302339
|
LB/B |
- |
|
rs2330126
|
- |
- |
|
rs2330837
|
LB/B |
- |
|
rs2330838
|
LB/B |
- |
|
rs2372536
|
- |
- |
|
rs2397118
|
- |
- |
|
rs2458502
|
- |
- |
|
rs2672150
|
- |
- |
|
rs267601394
|
LB/B |
- |
|
rs267601395
|
LB/B |
- |
|
rs267605525
|
Likely pathogenic |
Ethylmalonic encephalopathy [MONDO:MONDO:0011229,MedGen:C1865349,OMIM:602473,Orphanet:51188] |
|
rs267606635
|
US |
Severe combined immunodeficiency autosomal recessive T-cell-negative/B-cell-negative/NK-cell-negative due to adenosine deaminase deficiency (ADASCID) [MIM:102700] |
|
rs267606699
|
LP/P |
Desbuquois dysplasia 1 (DBQD1) [MIM:251450] |
|
rs267606700
|
- |
- |
|
rs267606700
|
LP/P |
Desbuquois dysplasia 1 (DBQD1) [MIM:251450] |
|
rs267606701
|
LP/P |
Desbuquois dysplasia 1 (DBQD1) [MIM:251450] |
|
rs267606755
|
Pathogenic/Likely pathogenic |
Deficiency of steroid 11-beta-monooxygenase|CYP11B1-related condition|not provided [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795||MedGen:C3661900] |
|
rs267606760
|
LP/P |
Orthostatic hypotension 1 (ORTHYP1) [MIM:223360] |
|
rs267606863
|
LP/P |
Lesch-Nyhan syndrome (LNS) [MIM:300322] |
|
rs267606870
|
LP/P |
D-2-hydroxyglutaric aciduria 2 (D2HGA2) [MIM:613657] |
|
rs267606887
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs267606920
|
LP/P |
Noonan syndrome 6 (NS6) [MIM:613224] |
|
rs267606920
|
Pathogenic |
Noonan syndrome 6|not provided|Noonan syndrome 1|RASopathy|NRAS-related condition [MONDO:MONDO:0013186,MedGen:C2750732,OMIM:613224,Orphanet:648|MedGen:C3661900|MONDO:MONDO:0008104,MedGen:C4551602,OMIM:163950,Orphanet:648|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391|] |
|
rs267606947
|
LP/P |
Phosphoglycerate dehydrogenase deficiency (PHGDHD) [MIM:601815] |
|
rs267606949
|
LP/P |
Phosphoglycerate dehydrogenase deficiency (PHGDHD) [MIM:601815] |
|
rs267606958
|
Pathogenic |
Pyridoxal phosphate-responsive seizures [MONDO:MONDO:0012407,MedGen:C1864723,OMIM:610090,Orphanet:79096] |
|
rs267607076
|
LP/P |
Intellectual developmental disorder, X-linked, syndromic, Snyder-Robinson type (MRXSSR) [MIM:309583] |
|
rs267607097
|
LP/P |
Mitochondrial DNA depletion syndrome 9 (MTDPS9) [MIM:245400] |
|
rs267607098
|
Pathogenic |
Mitochondrial DNA depletion syndrome 9 [MONDO:MONDO:0009504,MedGen:C3151476,OMIM:245400,Orphanet:17] |
|
rs267607099
|
LP/P |
Mitochondrial DNA depletion syndrome 9 (MTDPS9) [MIM:245400] |
|
rs281865438
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs281865454
|
Pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs281875326
|
Pathogenic |
Baraitser-winter syndrome 2|not provided|Congenital anomaly of kidney and urinary tract|Inborn genetic diseases [MONDO:MONDO:0013812,MedGen:C3281235,OMIM:614583,Orphanet:2995|MedGen:CN517202|MONDO:MONDO:0019719,MeSH:C566906,MedGen:C1968949,OMIM:PS610805,Orphanet:93545|MeSH:D030342,MedGen:C0950123] |
|
rs281875331
|
Pathogenic |
Baraitser-Winter syndrome 1|not provided [MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995|MedGen:CN517202] |
|
rs2835285
|
LB/B |
- |
|
rs28359542
|
LB/B |
- |
|
rs28365085
|
- |
- |
|
rs28371759
|
LB/B |
- |
|
rs28383048
|
LB/B |
- |
|
rs28383468
|
- |
- |
|
rs28383477
|
- |
- |
|
rs28383586
|
LB/B |
- |
|
rs28399505
|
LB/B |
- |
|
rs284797
|
- |
- |
|
rs2854482
|
LB/B |
- |
|
rs28730628
|
LB/B |
- |
|
rs28730674
|
- |
- |
|
rs28933401
|
Likely pathogenic |
Migraine, familial hemiplegic, 2|not provided [MONDO:MONDO:0011232,MedGen:C1865322,OMIM:602481,Orphanet:569|MedGen:C3661900] |
|
rs28933406
|
Likely pathogenic |
B-cell chronic lymphocytic leukemia|Malignant melanoma of skin|Pancreatic adenocarcinoma|Thyroid tumor|Hepatocellular carcinoma|Gastric adenocarcinoma|Squamous cell lung carcinoma|Transitional cell carcinoma of the bladder|Acute myeloid leukemia|Neoplasm of the large intestine|Malignant neoplasm of body of uterus|Multiple myeloma|Lung adenocarcinoma [Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0100031,MONDO:MONDO:0015074,MeSH:D013964,MedGen:C0040136,Orphanet:100087|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MedGen:C0153574|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013] |
|
rs28933406
|
LP/P |
Thyroid cancer, non-medullary, 2 (NMTC2) [MIM:188470] |
|
rs28933406
|
Pathogenic/Likely pathogenic |
Thyroid cancer, nonmedullary, 2|Spermatocytic seminoma|Breast neoplasm|Noonan syndrome 3|not provided|Lip and oral cavity carcinoma [MONDO:MONDO:0008566,MedGen:C4225426,OMIM:188470|MONDO:MONDO:0020513,MedGen:C0334517,Orphanet:99865|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648|MedGen:CN517202|MONDO:MONDO:0023644,MedGen:C0220641] |
|
rs28934586
|
Pathogenic/Likely pathogenic |
Deficiency of steroid 11-beta-monooxygenase|not provided|Glucocorticoid-remediable aldosteronism|Glucocorticoid-remediable aldosteronism [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795|MedGen:C3661900|MONDO:MONDO:0007080,MedGen:C3838731,OMIM:103900,Orphanet:403|MONDO:MONDO:0007080,MedGen:C3838731,OMIM:103900,Orphanet:403]; Deficiency of steroid 11-beta-monooxygenase [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795] |
|
rs28934876
|
LP/P |
Congenital disorder of glycosylation 1J (CDG1J) [MIM:608093] |
|
rs28935475
|
Pathogenic |
HSD10 mitochondrial disease|not provided [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295|MedGen:C3661900] |
|
rs28935487
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs28935491
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs28935492
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs28936701
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs28936701
|
Pathogenic |
Glaucoma 3A|not provided|Congenital glaucoma|Primary congenital glaucoma|Anterior segment dysgenesis 6 [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MedGen:C3661900|MONDO:MONDO:0020366,MedGen:C0020302|Human Phenotype Ontology:HP:0008007,MONDO:MONDO:0000365,MedGen:C1533041|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
rs28938472
|
Pathogenic |
Glutathione synthetase deficiency without 5-oxoprolinuria|Gluthathione synthetase deficiency [MONDO:MONDO:0009284,MedGen:C1856399,OMIM:231900,Orphanet:289849,Orphanet:32|Human Phenotype Ontology:HP:0003343,MONDO:MONDO:0017909,MedGen:C0398746,Orphanet:32] |
|
rs28938472
|
LP/P |
Glutathione synthetase deficiency (GSS deficiency) [MIM:266130] |
|
rs28939082
|
LP/P |
Optic atrophy 1 (OPA1) [MIM:165500] |
|
rs28940279
|
LP/P |
Canavan disease (CAND) [MIM:271900] |
|
rs28940283
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs28940289
|
LP/P |
Ethylmalonic encephalopathy (EE) [MIM:602473] |
|
rs28940589
|
LP/P |
Pyruvate carboxylase deficiency (PC deficiency) [MIM:266150] |
|
rs28940590
|
LP/P |
Pyruvate carboxylase deficiency (PC deficiency) [MIM:266150] |
|
rs28940868
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs28941774
|
LP/P |
Congenital erythropoietic porphyria (CEP) [MIM:263700] |
|
rs28941775
|
- |
- |
|
rs28941775
|
LP/P |
Congenital erythropoietic porphyria (CEP) [MIM:263700] |
|
rs28941784
|
LP/P |
Methylmalonic aciduria type cblB (MMAB) [MIM:251110] |
|
rs28941785
|
LP/P |
Cystathioninuria (CSTNU) [MIM:219500] |
|
rs28941786
|
LP/P |
Cystathioninuria (CSTNU) [MIM:219500] |
|
rs28999113
|
- |
- |
|
rs28999113
|
LP/P |
Adenine phosphoribosyltransferase deficiency (APRTD) [MIM:614723] |
|
rs2959896
|
- |
- |
|
rs3169258
|
Pathogenic |
Adenine phosphoribosyltransferase deficiency [MONDO:MONDO:0013869,MedGen:C0268120,OMIM:614723,Orphanet:976] |
|
rs3208363
|
LB/B |
- |
|
rs34082669
|
LB/B |
- |
|
rs34181110
|
LB/B |
- |
|
rs34354104
|
LB/B |
- |
|
rs34664134
|
- |
- |
|
rs34885252
|
LB/B |
- |
|
rs35007971
|
LB/B |
- |
|
rs35097308
|
LB/B |
- |
|
rs35117690
|
- |
- |
|
rs35128788
|
- |
- |
|
rs35229514
|
- |
- |
|
rs35385902
|
LB/B |
- |
|
rs35494829
|
- |
- |
|
rs35501326
|
- |
- |
|
rs35670089
|
LB/B |
- |
|
rs35698797
|
LB/B |
- |
|
rs35702888
|
LB/B |
- |
|
rs367543028
|
Pathogenic |
Bloom syndrome|not provided|Hereditary cancer-predisposing syndrome [MONDO:MONDO:0008876,MedGen:C0005859,OMIM:210900,Orphanet:125|MedGen:C3661900|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] |
|
rs367543259
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
|
rs367585605
|
Pathogenic/Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|Thrombophilia due to thrombin defect [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MONDO:MONDO:0008559,MedGen:C3160733,OMIM:188050]; Homocystinuria due to methylene tetrahydrofolate reductase deficiency [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395]; Neural tube defects, folate-sensitive [MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823]; Schizophrenia|Neural tube defects, folate-sensitive [Human Phenotype Ontology:HP:0100753,MONDO:MONDO:0005090,MeSH:D012559,MedGen:C0036341,OMIM:181500|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
rs367634557
|
Pathogenic/Likely pathogenic |
Deficiency of steroid 11-beta-monooxygenase|not provided [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795|MedGen:C3661900] |
|
rs367637749
|
- |
- |
|
rs367651399
|
- |
- |
|
rs367674632
|
Pathogenic/Likely pathogenic |
Hawkinsinuria [Human Phenotype Ontology:HP:0034457,MONDO:MONDO:0007700,MedGen:C2931042,OMIM:140350,Orphanet:2118]; Tyrosinemia type III|Tyrosinemia type III|not provided [MONDO:MONDO:0010162,MedGen:C0268623,OMIM:276710,Orphanet:69723|MONDO:MONDO:0010162,MedGen:C0268623,OMIM:276710,Orphanet:69723|MedGen:C3661900] |
|
rs367694828
|
- |
- |
|
rs367815523
|
- |
- |
|
rs367826293
|
- |
- |
|
rs367833709
|
Likely pathogenic |
not provided|Deficiency of steroid 17-alpha-monooxygenase [MedGen:C3661900|MONDO:MONDO:0008730,MedGen:C0268285,OMIM:202110,Orphanet:90793] |
|
rs367861880
|
- |
- |
|
rs367883268
|
- |
- |
|
rs367902441
|
- |
- |
|
rs367926309
|
- |
- |
|
rs367938014
|
- |
- |
|
rs367982076
|
- |
- |
|
rs368115694
|
Pathogenic/Likely pathogenic |
Vertebral, cardiac, renal, and limb defects syndrome 3 [MONDO:MONDO:0030077,MedGen:C5394250,OMIM:618845] |
|
rs368127499
|
- |
- |
|
rs368171697
|
- |
- |
|
rs368327291
|
- |
- |
|
rs368366043
|
- |
- |
|
rs368386747
|
LP/P |
Pseudovaginal perineoscrotal hypospadias (PPSH) [MIM:264600] |
|
rs368438393
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs368454909
|
LP/P |
Mucopolysaccharidosis 1H (MPS1H) [MIM:607014] |
|
rs368521899
|
- |
- |
|
rs368548274
|
- |
- |
|
rs368688262
|
- |
- |
|
rs368758960
|
- |
- |
|
rs368767518
|
- |
- |
|
rs369010777
|
- |
- |
|
rs369011114
|
- |
- |
|
rs369061090
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs369106912
|
- |
- |
|
rs369153479
|
Pathogenic |
Mitochondrial DNA depletion syndrome 9 [MONDO:MONDO:0009504,MedGen:C3151476,OMIM:245400,Orphanet:17] |
|
rs369323241
|
- |
- |
|
rs369522795
|
- |
- |
|
rs369551783
|
- |
- |
|
rs369608407
|
Pathogenic/Likely pathogenic |
Epileptic encephalopathy|Developmental and epileptic encephalopathy, 84 [Human Phenotype Ontology:HP:0200134,MedGen:C0543888|MONDO:MONDO:0032918,MedGen:C5394081,OMIM:618792] |
|
rs369643387
|
Pathogenic |
Succinyl-CoA acetoacetate transferase deficiency [MONDO:MONDO:0009492,MedGen:C0342792,OMIM:245050,Orphanet:832] |
|
rs369643556
|
- |
- |
|
rs369681854
|
Pathogenic |
Adenine phosphoribosyltransferase deficiency [MONDO:MONDO:0013869,MedGen:C0268120,OMIM:614723,Orphanet:976] |
|
rs369714039
|
- |
- |
|
rs369842187
|
- |
- |
|
rs370028348
|
- |
- |
|
rs370107958
|
Likely pathogenic |
not specified|Mucopolysaccharidosis, MPS-IV-B [MedGen:CN169374|MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582] |
|
rs370144544
|
- |
- |
|
rs370245703
|
- |
- |
|
rs370269377
|
- |
- |
|
rs370273690
|
LP/P |
Glucocorticoid deficiency 4 with or without mineralocorticoid deficiency (GCCD4) [MIM:614736] |
|
rs370312954
|
- |
- |
|
rs370351723
|
- |
- |
|
rs370384697
|
- |
- |
|
rs370421531
|
Pathogenic |
not provided|Deficiency of guanidinoacetate methyltransferase|Cerebral creatine deficiency syndrome [MedGen:C3661900|MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382|MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172] |
|
rs370433029
|
- |
- |
|
rs370434436
|
- |
- |
|
rs370444838
|
LP/P |
Combined immunodeficiency and megaloblastic anemia with or without hyperhomocysteinemia (CIMAH) [MIM:617780] |
|
rs370539470
|
- |
- |
|
rs370720208
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of acetyl-CoA acetyltransferase [MedGen:C3661900|MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs370785052
|
- |
- |
|
rs370840098
|
- |
- |
|
rs370866394
|
- |
- |
|
rs371050975
|
- |
- |
|
rs371085894
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs371090069
|
- |
- |
|
rs371260220
|
- |
- |
|
rs371265106
|
LP/P |
Citrullinemia 1 (CTLN1) [MIM:215700] |
|
rs371271054
|
LP/P |
Thiamine metabolism dysfunction syndrome 5, episodic encephalopathy type (THMD5) [MIM:614458] |
|
rs371517491
|
- |
- |
|
rs371517491
|
Pathogenic/Likely pathogenic |
Deficiency of galactokinase [MONDO:MONDO:0009255,MedGen:C0268155,OMIM:230200,Orphanet:352,Orphanet:79237] |
|
rs371526758
|
Pathogenic |
Leber congenital amaurosis 9|not provided [MONDO:MONDO:0012056,MedGen:C1837873,OMIM:608553,Orphanet:65|MedGen:C3661900] |
|
rs371582393
|
Likely pathogenic |
Mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency [MONDO:MONDO:0014563,MedGen:C4225391,OMIM:616277,Orphanet:255241] |
|
rs371623501
|
- |
- |
|
rs371767574
|
- |
- |
|
rs371807385
|
- |
- |
|
rs371825363
|
Likely pathogenic |
not provided|Deficiency of steroid 17-alpha-monooxygenase [MedGen:C3661900|MONDO:MONDO:0008730,MedGen:C0268285,OMIM:202110,Orphanet:90793] |
|
rs371834662
|
- |
- |
|
rs371840002
|
- |
- |
|
rs371856135
|
- |
- |
|
rs371911407
|
- |
- |
|
rs371918677
|
- |
- |
|
rs372014965
|
- |
- |
|
rs372027428
|
LB/B |
- |
|
rs372045419
|
- |
- |
|
rs372052157
|
- |
- |
|
rs372056651
|
- |
- |
|
rs372138644
|
- |
- |
|
rs372231982
|
- |
- |
|
rs372255821
|
- |
- |
|
rs372270451
|
- |
- |
|
rs372290095
|
Pathogenic |
Pseudohypoparathyroidism type I A|not provided [MONDO:MONDO:0007078,MedGen:C3494506,OMIM:103580,Orphanet:79443|MedGen:C3661900] |
|
rs372332465
|
- |
- |
|
rs372399525
|
- |
- |
|
rs372401715
|
- |
- |
|
rs372660425
|
Pathogenic |
Pyridoxine-dependent epilepsy|not provided [MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006|MedGen:C3661900] |
|
rs372686234
|
- |
- |
|
rs372696285
|
- |
- |
|
rs372764747
|
- |
- |
|
rs372885680
|
- |
- |
|
rs372912506
|
- |
- |
|
rs373088979
|
- |
- |
|
rs373116402
|
- |
- |
|
rs373124776
|
- |
- |
|
rs373232513
|
- |
- |
|
rs373239891
|
- |
- |
|
rs373307393
|
Pathogenic |
not provided|Glycogen storage disease, type II [MedGen:C3661900|MONDO:MONDO:0009290,MedGen:C0017921,OMIM:232300,Orphanet:365] |
|
rs3733890
|
- |
- |
|
rs373398993
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs373442940
|
- |
- |
|
rs373458753
|
LP/P |
Adenylosuccinase deficiency (ADSLD) [MIM:103050] |
|
rs373611092
|
- |
- |
|
rs373645316
|
- |
- |
|
rs373705613
|
- |
- |
|
rs373774032
|
Pathogenic/Likely pathogenic |
not provided|Congenital microcephaly - severe encephalopathy - progressive cerebral atrophy syndrome|Inborn genetic diseases [MedGen:C3661900|MONDO:MONDO:0014258,MedGen:C3809971,OMIM:615574,Orphanet:391376|MeSH:D030342,MedGen:C0950123] |
|
rs373782713
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs373782713
|
Pathogenic |
Classic homocystinuria|Homocystinuria|not provided|HYPERHOMOCYSTEINEMIA, THROMBOTIC, CBS-RELATED|Familial thoracic aortic aneurysm and aortic dissection [MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394|Human Phenotype Ontology:HP:0002156,MONDO:MONDO:0004737,MedGen:C0019880|MedGen:C3661900|MedGen:C3150344|MONDO:MONDO:0019625,MedGen:C4707243,OMIM:PS607086,Orphanet:91387] |
|
rs373846010
|
- |
- |
|
rs373875697
|
- |
- |
|
rs373931629
|
- |
- |
|
rs374024099
|
- |
- |
|
rs374118874
|
- |
- |
|
rs374232934
|
- |
- |
|
rs374259530
|
Pathogenic |
not provided|Adenylosuccinate lyase deficiency|Generalized myoclonic seizure [MedGen:C3661900|MONDO:MONDO:0007068,MedGen:C0268126,OMIM:103050,Orphanet:46|Human Phenotype Ontology:HP:0002123,Human Phenotype Ontology:HP:0006869,Human Phenotype Ontology:HP:0006902,Human Phenotype Ontology:HP:0007075,Human Phenotype Ontology:HP:0007202,Human Phenotype Ontology:HP:0007284,Human Phenotype Ontology:HP:0007294,MedGen:C4021759]; Difficulty standing [Human Phenotype Ontology:HP:0003698,MedGen:C0241237]; Progressive neurologic deterioration [Human Phenotype Ontology:HP:0002344,MedGen:C1854838]; Severe global developmental delay [Human Phenotype Ontology:HP:0011344,MedGen:C1837397]; Inability to walk|Inborn genetic diseases [Human Phenotype Ontology:HP:0002540,MedGen:C0560046|MeSH:D030342,MedGen:C0950123] |
|
rs374377399
|
- |
- |
|
rs3744032
|
- |
- |
|
rs3745207
|
- |
- |
|
rs374714195
|
- |
- |
|
rs374724533
|
Pathogenic |
Cerebral creatine deficiency syndrome|Deficiency of guanidinoacetate methyltransferase|not provided [MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172|MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382|MedGen:C3661900] |
|
rs374724805
|
Pathogenic |
Glutamate formiminotransferase deficiency [MONDO:MONDO:0009240,MedGen:C0268609,OMIM:229100,Orphanet:51208] |
|
rs374810645
|
- |
- |
|
rs374816177
|
- |
- |
|
rs374871539
|
Likely pathogenic |
6-Pyruvoyl-tetrahydrobiopterin synthase deficiency [MONDO:MONDO:0009863,MedGen:C0878676,OMIM:261640,Orphanet:13,Orphanet:238583] |
|
rs374926260
|
- |
- |
|
rs375032130
|
Pathogenic/Likely pathogenic |
not provided|Mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency|See cases [MedGen:C3661900|MONDO:MONDO:0014563,MedGen:C4225391,OMIM:616277,Orphanet:255241|] |
|
rs375253960
|
- |
- |
|
rs375266808
|
Pathogenic |
Mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency|not provided [MONDO:MONDO:0014563,MedGen:C4225391,OMIM:616277,Orphanet:255241|MedGen:C3661900] |
|
rs375310352
|
- |
- |
|
rs375628463
|
LP/P |
Succinic semialdehyde dehydrogenase deficiency (SSADHD) [MIM:271980] |
|
rs375683615
|
Pathogenic |
Nonsyndromic congenital nail disorder 3 [MONDO:MONDO:0007900,MedGen:C0544855,OMIM:151600] |
|
rs375690568
|
LP/P |
Galactosemia 2 (GALAC2) [MIM:230200] |
|
rs375736464
|
Likely pathogenic |
Spongy degeneration of central nervous system [MONDO:MONDO:0010079,MedGen:C0206307,OMIM:271900,Orphanet:141] |
|
rs375805362
|
- |
- |
|
rs375806157
|
- |
- |
|
rs375833424
|
Pathogenic/Likely pathogenic |
Deficiency of steroid 11-beta-monooxygenase|not provided [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795|MedGen:C3661900] |
|
rs375923779
|
- |
- |
|
rs375968716
|
- |
- |
|
rs375990689
|
- |
- |
|
rs375997993
|
- |
- |
|
rs376074317
|
- |
- |
|
rs376092764
|
- |
- |
|
rs376093116
|
- |
- |
|
rs376106786
|
- |
- |
|
rs376128990
|
LP/P |
Methylmalonic aciduria type cblB (MMAB) [MIM:251110] |
|
rs376158103
|
- |
- |
|
rs376297762
|
- |
- |
|
rs376587143
|
- |
- |
|
rs376663785
|
LP/P |
GM1-gangliosidosis 3 (GM1G3) [MIM:230650] |
|
rs376663785
|
Pathogenic/Likely pathogenic |
not provided|Inborn genetic diseases|Mucopolysaccharidosis, MPS-IV-B [MedGen:C3661900|MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582]; GM1 gangliosidosis|GM1 gangliosidosis type 2 [MONDO:MONDO:0018149,MedGen:C0085131,Orphanet:354|MONDO:MONDO:0009261,MedGen:C0268272,OMIM:230600,Orphanet:354,Orphanet:79256]; Infantile GM1 gangliosidosis [MONDO:MONDO:0009260,MedGen:C0268271,OMIM:230500,Orphanet:354,Orphanet:79255]; Mucopolysaccharidosis, MPS-IV-B [MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582]; GM1 gangliosidosis type 3|Mucopolysaccharidosis, MPS-IV-B|GLB1-Related Disorders [MONDO:MONDO:0009262,MedGen:C0268273,OMIM:230650,Orphanet:79257|MONDO:MONDO:0009660,MedGen:C0086652,OMIM:253010,Orphanet:309310,Orphanet:582|MedGen:CN169666] |
|
rs376669118
|
- |
- |
|
rs376690171
|
- |
- |
|
rs376698630
|
- |
- |
|
rs376788669
|
- |
- |
|
rs376854191
|
LB/B |
- |
|
rs376921959
|
- |
- |
|
rs376938314
|
- |
- |
|
rs376982466
|
LP/P |
Cerebral creatine deficiency syndrome 3 (CCDS3) [MIM:612718] |
|
rs376989086
|
- |
- |
|
rs377156203
|
- |
- |
|
rs377159042
|
- |
- |
|
rs377295639
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs377316171
|
- |
- |
|
rs377342766
|
- |
- |
|
rs377345472
|
- |
- |
|
rs377376739
|
- |
- |
|
rs377518755
|
- |
- |
|
rs377544304
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs377578020
|
LP/P |
Cerebral creatine deficiency syndrome 3 (CCDS3) [MIM:612718] |
|
rs377592729
|
- |
- |
|
rs377699817
|
- |
- |
|
rs3863907
|
- |
- |
|
rs386833626
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833627
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833647
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833648
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833649
|
- |
- |
|
rs386833649
|
Pathogenic/Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833650
|
Pathogenic |
Neuronal ceroid lipofuscinosis 1|not provided [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MedGen:C3661900] |
|
rs386833654
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833655
|
- |
- |
|
rs386833655
|
Pathogenic/Likely pathogenic |
Neuronal ceroid lipofuscinosis 1|not provided|Inborn genetic diseases|Neuronal ceroid lipofuscinosis [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MedGen:C3661900|MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0016295,MedGen:C0027877,OMIM:PS256730,Orphanet:216,Orphanet:79263] |
|
rs386833656
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833657
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833658
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833661
|
Pathogenic/Likely pathogenic |
Neuronal ceroid lipofuscinosis 1|Neuronal ceroid lipofuscinosis|Spastic ataxia [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MONDO:MONDO:0016295,MedGen:C0027877,OMIM:PS256730,Orphanet:216,Orphanet:79263|Human Phenotype Ontology:HP:0002497,MONDO:MONDO:0017845,MedGen:C1849156,OMIM:PS108600,Orphanet:316226] |
|
rs386833663
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833665
|
Pathogenic/Likely pathogenic |
Neuronal ceroid lipofuscinosis 1|not provided|Neuronal ceroid lipofuscinosis [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329|MedGen:C3661900|MONDO:MONDO:0016295,MedGen:C0027877,OMIM:PS256730,Orphanet:216,Orphanet:79263] |
|
rs386833666
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833668
|
Pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs386833669
|
Likely pathogenic |
Neuronal ceroid lipofuscinosis 1 [MONDO:MONDO:0009744,MedGen:C1850451,OMIM:256730,Orphanet:228329] |
|
rs387906253
|
LP/P |
Acyl-CoA dehydrogenase very long-chain deficiency (ACADVLD) [MIM:201475] |
|
rs387906468
|
Pathogenic/Likely pathogenic |
G6PD PUERTO LIMON|Anemia, nonspherocytic hemolytic, due to G6PD deficiency|not provided [|MONDO:MONDO:0010480,MedGen:C2720289,OMIM:300908,Orphanet:466026|MedGen:C3661900] |
|
rs387906535
|
Pathogenic |
Familial visceral amyloidosis, Ostertag type [MONDO:MONDO:0007099,MedGen:C0268389,OMIM:105200,Orphanet:85450] |
|
rs387906536
|
Pathogenic |
Familial visceral amyloidosis, Ostertag type|not provided [MONDO:MONDO:0007099,MedGen:C0268389,OMIM:105200,Orphanet:85450|MedGen:C3661900] |
|
rs387906595
|
Pathogenic |
Hyperbiliverdinemia [MONDO:MONDO:0013595,MedGen:C3279964,OMIM:614156,Orphanet:276405] |
|
rs387906596
|
Pathogenic |
Hyperbiliverdinemia|not provided [MONDO:MONDO:0013595,MedGen:C3279964,OMIM:614156,Orphanet:276405|MedGen:CN517202] |
|
rs387906619
|
LP/P |
Megaloblastic anemia due to dihydrofolate reductase deficiency (DHFRD) [MIM:613839] |
|
rs387906643
|
LP/P |
Microcephaly with or without chorioretinopathy, lymphedema, or impaired intellectual development (MCLMR) [MIM:152950] |
|
rs387906751
|
Pathogenic |
46,XY disorder of sex development due to testicular 17,20-desmolase deficiency [Gene:6994,MONDO:MONDO:0013664,MedGen:C1839840,OMIM:614279,Orphanet:443087] |
|
rs387906755
|
Pathogenic |
3-methylglutaconic aciduria type 1|not provided [MONDO:MONDO:0009610,MedGen:C0342727,OMIM:250950,Orphanet:67046|MedGen:CN517202] |
|
rs387906756
|
Pathogenic |
3-methylglutaconic aciduria type 1 [MONDO:MONDO:0009610,MedGen:C0342727,OMIM:250950,Orphanet:67046] |
|
rs387906885
|
LP/P |
Rafiq syndrome (RAFQS) [MIM:614202] |
|
rs387906886
|
LP/P |
Rafiq syndrome (RAFQS) [MIM:614202] |
|
rs387906935
|
Pathogenic |
Childhood encephalopathy due to thiamine pyrophosphokinase deficiency [MONDO:MONDO:0013761,MedGen:C3280866,OMIM:614458,Orphanet:293955] |
|
rs387907178
|
Pathogenic |
Auriculocondylar syndrome 1 [MONDO:MONDO:0011234,MedGen:C4551996,OMIM:602483,Orphanet:137888] |
|
rs387907200
|
Pathogenic |
Dopa-responsive dystonia due to sepiapterin reductase deficiency [MONDO:MONDO:0012994,MedGen:C0268468,OMIM:612716,Orphanet:70594] |
|
rs387907206
|
LP/P |
Cardiofaciocutaneous syndrome 2 (CFC2) [MIM:615278] |
|
rs387907234
|
LP/P |
Glucocorticoid deficiency 4 with or without mineralocorticoid deficiency (GCCD4) [MIM:614736] |
|
rs387907243
|
LP/P |
Myasthenic syndrome, congenital, 13 (CMS13) [MIM:614750] |
|
rs387907243
|
Likely pathogenic |
Congenital myasthenic syndrome 13|Congenital myasthenic syndrome 13 [MONDO:MONDO:0013883,MedGen:C3553645,OMIM:614750,Orphanet:353327,Orphanet:590|MONDO:MONDO:0013883,MedGen:C3553645,OMIM:614750,Orphanet:353327,Orphanet:590]; DPAGT1-congenital disorder of glycosylation [MONDO:MONDO:0011964,MedGen:C2931004,OMIM:608093,Orphanet:86309] |
|
rs387907279
|
Pathogenic |
Karyomegalic interstitial nephritis|not provided [MONDO:MONDO:0013898,MedGen:C3553774,OMIM:614817,Orphanet:401996|MedGen:C3661900] |
|
rs387907280
|
Pathogenic |
Karyomegalic interstitial nephritis [MONDO:MONDO:0013898,MedGen:C3553774,OMIM:614817,Orphanet:401996] |
|
rs387907291
|
LP/P |
Leber congenital amaurosis 9 (LCA9) [MIM:608553] |
|
rs387907293
|
LP/P |
Leber congenital amaurosis 9 (LCA9) [MIM:608553] |
|
rs387907572
|
Pathogenic/Likely pathogenic |
Deficiency of steroid 11-beta-monooxygenase|not provided [MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795|MedGen:C3661900] |
|
rs3895576
|
LB/B |
- |
|
rs397508174
|
Pathogenic |
Cystic fibrosis|CFTR-related disorders [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586|] |
|
rs397508175
|
Pathogenic |
Cystic fibrosis|CFTR-related disorders [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586|] |
|
rs397508195
|
LP/P |
Cystic fibrosis (CF) [MIM:219700] |
|
rs397508198
|
Pathogenic/Likely pathogenic |
Cystic fibrosis|Hereditary pancreatitis|not provided [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586|MONDO:MONDO:0008185,MedGen:C0238339,OMIM:167800,Orphanet:676|MedGen:CN517202] |
|
rs397508214
|
Likely pathogenic |
Cystic fibrosis [MONDO:MONDO:0009061,MedGen:C0010674,OMIM:219700,Orphanet:586] |
|
rs397508282
|
LP/P |
Cystic fibrosis (CF) [MIM:219700] |
|
rs397508288
|
LP/P |
Cystic fibrosis (CF) [MIM:219700] |
|
rs397508313
|
LP/P |
Cystic fibrosis (CF) [MIM:219700] |
|
rs397514452
|
LP/P |
Hypermethioninemia due to adenosine kinase deficiency (HMAKD) [MIM:614300] |
|
rs397514454
|
LP/P |
Hypermethioninemia due to adenosine kinase deficiency (HMAKD) [MIM:614300] |
|
rs397514469
|
LP/P |
Acrodysostosis 2, with or without hormone resistance (ACRDYS2) [MIM:614613] |
|
rs397514553
|
LP/P |
Keratinocytic non-epidermolytic nevus (KNEN) [MIM:162900] |
|
rs397514553
|
Pathogenic |
Epidermal nevus|Noonan syndrome 1 [Human Phenotype Ontology:HP:0010816,MONDO:MONDO:0008093,MedGen:C0334082,OMIM:162900,Orphanet:79414|MONDO:MONDO:0008104,MedGen:C4551602,OMIM:163950,Orphanet:648] |
|
rs397514586
|
Pathogenic |
DPAGT1-congenital disorder of glycosylation [MONDO:MONDO:0011964,MedGen:C2931004,OMIM:608093,Orphanet:86309] |
|
rs397514649
|
Pathogenic/Likely pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs397514650
|
LP/P |
Dihydrolipoamide dehydrogenase deficiency (DLDD) [MIM:246900] |
|
rs397514698
|
Pathogenic/Likely pathogenic |
Capillary malformation|Sturge-Weber syndrome|Capillary malformation [Human Phenotype Ontology:HP:0025104,MONDO:MONDO:0016231,MedGen:C0340803,Orphanet:211247|MONDO:MONDO:0008501,MedGen:C0038505,OMIM:185300,Orphanet:3205|Human Phenotype Ontology:HP:0025104,MONDO:MONDO:0016231,MedGen:C0340803,Orphanet:211247]; Sturge-Weber syndrome|Hemangiomatosis|Angioosteohypertrophic syndrome|Segmental undergrowth associated with capillary malformation|not provided|Familial multiple nevi flammei|Melanoma [MONDO:MONDO:0008501,MedGen:C0038505,OMIM:185300,Orphanet:3205|Human Phenotype Ontology:HP:0007461,MedGen:C1384590|MONDO:MONDO:0007864,MedGen:C0022739,OMIM:149000,Orphanet:2346||MedGen:C3661900|MONDO:MONDO:0008094,MedGen:C2931029,OMIM:163000,Orphanet:624|Human Phenotype Ontology:HP:0002861,Human Phenotype Ontology:HP:0002887,Human Phenotype Ontology:HP:0006777,Human Phenotype Ontology:HP:0007474,MONDO:MONDO:0005105,MeSH:D008545,MedGen:C0025202] |
|
rs397514708
|
Pathogenic |
Arginine:glycine amidinotransferase deficiency|Fanconi renotubular syndrome 1 [MONDO:MONDO:0012996,MedGen:C2675179,OMIM:612718,Orphanet:35704|MONDO:MONDO:0024525,MedGen:C4551503,OMIM:134600]; Arginine:glycine amidinotransferase deficiency [MONDO:MONDO:0012996,MedGen:C2675179,OMIM:612718,Orphanet:35704] |
|
rs397514768
|
Pathogenic |
Auriculocondylar syndrome 1 [MONDO:MONDO:0011234,MedGen:C4551996,OMIM:602483,Orphanet:137888] |
|
rs397515329
|
Pathogenic |
DPAGT1-congenital disorder of glycosylation [MONDO:MONDO:0011964,MedGen:C2931004,OMIM:608093,Orphanet:86309] |
|
rs397515528
|
LP/P |
Congenital erythropoietic porphyria (CEP) [MIM:263700] |
|
rs397515548
|
US |
Weaver syndrome (WVS) [MIM:277590] |
|
rs397515551
|
Pathogenic |
Syndromic X-linked intellectual disability Snyder type [MONDO:MONDO:0010664,MedGen:C0796160,OMIM:309583,Orphanet:3063] |
|
rs397515577
|
Likely pathogenic |
Dystonia 12 [MONDO:MONDO:0007496,MedGen:C1868681,OMIM:128235,Orphanet:71517] |
|
rs397516685
|
Pathogenic/Likely pathogenic |
Familial thoracic aortic aneurysm and aortic dissection|not provided|Aortic aneurysm, familial thoracic 6|ACTA2-Related Disorders|Isolated thoracic aortic aneurysm [MONDO:MONDO:0019625,MedGen:C4707243,OMIM:PS607086,Orphanet:91387|MedGen:C3661900|MONDO:MONDO:0012730,MedGen:C2673186,OMIM:611788||] |
|
rs397517040
|
Likely pathogenic |
Non-small cell lung carcinoma|not provided|Prostate cancer, hereditary, 1 [Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|MedGen:CN517202|MONDO:MONDO:0011098,MedGen:C4722327,OMIM:601518,Orphanet:1331] |
|
rs397517041
|
Likely pathogenic |
Noonan syndrome [MONDO:MONDO:0018997,MeSH:D009634,MedGen:C0028326,OMIM:PS163950,Orphanet:648] |
|
rs397518462
|
LP/P |
Alacrima, achalasia, and impaired intellectual development syndrome (AAMR) [MIM:615510] |
|
rs398122379
|
LP/P |
Hexokinase deficiency (HK deficiency) [MIM:235700] |
|
rs398122973
|
LP/P |
Asparagine synthetase deficiency (ASNSD) [MIM:615574] |
|
rs398123174
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs398123182
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase [MedGen:C3661900|MONDO:MONDO:0009258,MedGen:C0268151,OMIM:230400,Orphanet:352,Orphanet:79239] |
|
rs398123221
|
Pathogenic |
not provided|Fabry disease [MedGen:C3661900|Human Phenotype Ontology:HP:0001071,MONDO:MONDO:0010526,MedGen:C0002986,OMIM:301500,Orphanet:324] |
|
rs398123503
|
LP/P |
Maple syrup urine disease 1A (MSUD1A) [MIM:248600] |
|
rs398123503
|
Pathogenic/Likely pathogenic |
Maple syrup urine disease|not provided [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511|MedGen:C3661900] |
|
rs398123675
|
Pathogenic |
not provided|Maple syrup urine disease [MedGen:C3661900|MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs398124208
|
Pathogenic/Likely pathogenic |
Glycogen storage disease, type V|not provided [MONDO:MONDO:0009293,MedGen:C0017924,OMIM:232600,Orphanet:368|MedGen:C3661900] |
|
rs398124434
|
Pathogenic/Likely pathogenic |
Methylmalonic aciduria, cblB type|not provided [MONDO:MONDO:0009614,MedGen:C1855102,OMIM:251110,Orphanet:28,Orphanet:79311|MedGen:C3661900] |
|
rs4049829
|
- |
- |
|
rs408038
|
LB/B |
- |
|
rs41286880
|
- |
- |
|
rs41286884
|
- |
- |
|
rs41291556
|
LB/B |
- |
|
rs41432647
|
- |
- |
|
rs41509647
|
- |
- |
|
rs4426527
|
LB/B |
- |
|
rs4494683
|
- |
- |
|
rs449856
|
LB/B |
- |
|
rs45454695
|
LB/B |
- |
|
rs45489599
|
- |
- |
|
rs45523444
|
LB/B |
- |
|
rs45529437
|
LB/B |
- |
|
rs45562238
|
LB/B |
- |
|
rs45624336
|
LB/B |
- |
|
rs4586421
|
LB/B |
- |
|
rs4731
|
LB/B |
- |
|
rs483352809
|
Pathogenic/Likely pathogenic |
Torsion dystonia 4 [MONDO:MONDO:0007493,MedGen:C1851943,OMIM:128101,Orphanet:98805]; Hypomyelinating leukodystrophy 6|Abnormality of the nervous system|Hypomyelinating leukodystrophy 6|not provided [MONDO:MONDO:0012905,MedGen:C2676244,OMIM:612438,Orphanet:139441|Human Phenotype Ontology:HP:0000707,Human Phenotype Ontology:HP:0001333,Human Phenotype Ontology:HP:0006987,MONDO:MONDO:0002320,MedGen:C0497552|MONDO:MONDO:0012905,MedGen:C2676244,OMIM:612438,Orphanet:139441|MedGen:C3661900] |
|
rs4850168
|
- |
- |
|
rs4850284
|
- |
- |
|
rs4986871
|
LB/B |
- |
|
rs4986908
|
LB/B |
- |
|
rs4986910
|
LB/B |
- |
|
rs4987161
|
LB/B |
- |
|
rs5030752
|
LB/B |
- |
|
rs5030841
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs5030842
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs5030846
|
Pathogenic |
Phenylketonuria|not provided|PAH-related condition|Inborn genetic diseases [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716|MedGen:C3661900||MeSH:D030342,MedGen:C0950123] |
|
rs5030847
|
- |
- |
|
rs5030847
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs5030851
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs5054
|
LB/B |
- |
|
rs5056
|
LB/B |
- |
|
rs527236146
|
Pathogenic/Likely pathogenic |
Glycogen storage disease, type V [MONDO:MONDO:0009293,MedGen:C0017924,OMIM:232600,Orphanet:368] |
|
rs527497633
|
- |
- |
|
rs527573101
|
- |
- |
|
rs527580106
|
- |
- |
|
rs527625651
|
- |
- |
|
rs528393793
|
- |
- |
|
rs529535145
|
- |
- |
|
rs530783531
|
- |
- |
|
rs530957915
|
- |
- |
|
rs530962130
|
- |
- |
|
rs5312
|
LB/B |
- |
|
rs5317
|
LB/B |
- |
|
rs5319
|
LB/B |
- |
|
rs532190594
|
Pathogenic |
not provided|Deficiency of acetyl-CoA acetyltransferase [MedGen:C3661900|MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs532262598
|
- |
- |
|
rs532952188
|
- |
- |
|
rs533469192
|
- |
- |
|
rs534828213
|
- |
- |
|
rs536205988
|
- |
- |
|
rs536230471
|
- |
- |
|
rs537907558
|
- |
- |
|
rs539558180
|
- |
- |
|
rs539726091
|
- |
- |
|
rs539728659
|
- |
- |
|
rs539898848
|
Pathogenic/Likely pathogenic |
Glycogen storage disease, type VI [MONDO:MONDO:0009294,MedGen:C0017925,OMIM:232700,Orphanet:369] |
|
rs539939995
|
- |
- |
|
rs540242322
|
- |
- |
|
rs540403059
|
- |
- |
|
rs540559098
|
- |
- |
|
rs540648461
|
- |
- |
|
rs541141393
|
- |
- |
|
rs541509845
|
- |
- |
|
rs541517496
|
Pathogenic/Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs542597307
|
- |
- |
|
rs543446294
|
- |
- |
|
rs543745251
|
- |
- |
|
rs543931018
|
- |
- |
|
rs544321005
|
- |
- |
|
rs545086633
|
Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|Neural tube defects, folate-sensitive [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
|
rs545215807
|
LP/P |
Acyl-CoA dehydrogenase very long-chain deficiency (ACADVLD) [MIM:201475] |
|
rs545372800
|
- |
- |
|
rs545752791
|
- |
- |
|
rs546995952
|
- |
- |
|
rs547918064
|
- |
- |
|
rs547918064
|
Likely pathogenic |
not provided|Isolated microphthalmia 8 [MedGen:C3661900|MONDO:MONDO:0014050,MedGen:C3554524,OMIM:615113,Orphanet:2542] |
|
rs548538312
|
- |
- |
|
rs548817584
|
- |
- |
|
rs549029029
|
LP/P |
Glycogen storage disease 2 (GSD2) [MIM:232300] |
|
rs549085827
|
Pathogenic/Likely pathogenic |
Citrullinemia|Citrullinemia type I [Human Phenotype Ontology:HP:0032397,MONDO:MONDO:0015991,MedGen:C0175683,Orphanet:187|MONDO:MONDO:0008988,MedGen:C4721769,OMIM:215700,Orphanet:247525] |
|
rs549256374
|
- |
- |
|
rs549257982
|
- |
- |
|
rs549266010
|
- |
- |
|
rs550374458
|
- |
- |
|
rs550705310
|
- |
- |
|
rs551051195
|
- |
- |
|
rs551564683
|
LB/B |
- |
|
rs551699564
|
- |
- |
|
rs552264498
|
- |
- |
|
rs552474817
|
- |
- |
|
rs552746066
|
- |
- |
|
rs552997428
|
- |
- |
|
rs553481936
|
- |
- |
|
rs553548999
|
- |
- |
|
rs554595347
|
- |
- |
|
rs555935217
|
- |
- |
|
rs555959266
|
LP/P |
Cystathionine beta-synthase deficiency (CBSD) [MIM:236200] |
|
rs556067053
|
- |
- |
|
rs556081405
|
- |
- |
|
rs556400964
|
Pathogenic |
not provided|Pyridoxine-dependent epilepsy [MedGen:C3661900|MONDO:MONDO:0009945,MedGen:C1849508,OMIM:266100,Orphanet:3006] |
|
rs556631070
|
- |
- |
|
rs556829801
|
Pathogenic |
Cerebral creatine deficiency syndrome|Deficiency of guanidinoacetate methyltransferase [MONDO:MONDO:0000456,MedGen:C5244016,OMIM:PS300352,Orphanet:79172|MONDO:MONDO:0012999,MedGen:C0574080,OMIM:612736,Orphanet:382] |
|
rs556944473
|
- |
- |
|
rs557050126
|
- |
- |
|
rs557557314
|
- |
- |
|
rs55785340
|
LB/B |
- |
|
rs557905773
|
- |
- |
|
rs558683362
|
LP/P |
Mucopolysaccharidosis 1H (MPS1H) [MIM:607014] |
|
rs55901263
|
LB/B |
- |
|
rs559384888
|
- |
- |
|
rs55951658
|
LB/B |
- |
|
rs559609255
|
- |
- |
|
rs559792550
|
- |
- |
|
rs55989760
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs55989760
|
Pathogenic/Likely pathogenic |
Glaucoma 3A|Primary congenital glaucoma|not provided|Glaucoma of childhood|Anterior segment dysgenesis 6|Congenital glaucoma|Glaucoma 3A [MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|Human Phenotype Ontology:HP:0008007,MONDO:MONDO:0000365,MedGen:C1533041|MedGen:C3661900|Human Phenotype Ontology:HP:0001087,MONDO:MONDO:0020367,MedGen:C2981140,Orphanet:98977|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315|MONDO:MONDO:0020366,MedGen:C0020302|MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977]; Glaucoma 3, primary infantile, B [MONDO:MONDO:0010968,MedGen:C1832977,OMIM:600975,Orphanet:98976]; Anterior segment dysgenesis 6 [MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315] |
|
rs56005131
|
- |
- |
|
rs56010818
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs56010818
|
Pathogenic/Likely pathogenic |
not provided|Anterior segment dysgenesis 6|Glaucoma 3A|Congenital glaucoma [MedGen:C3661900|MONDO:MONDO:0015016,MedGen:C4310623,OMIM:617315|MONDO:MONDO:0009277,MedGen:C1856439,OMIM:231300,Orphanet:98976,Orphanet:98977|MONDO:MONDO:0020366,MedGen:C0020302] |
|
rs560847516
|
- |
- |
|
rs561027881
|
- |
- |
|
rs561279065
|
- |
- |
|
rs56182143
|
- |
- |
|
rs56199635
|
LB/B |
- |
|
rs56251804
|
- |
- |
|
rs562642551
|
- |
- |
|
rs56324128
|
LB/B |
- |
|
rs56337013
|
LB/B |
- |
|
rs56350236
|
LB/B |
- |
|
rs563826316
|
- |
- |
|
rs5639
|
LB/B |
- |
|
rs5641
|
LB/B |
- |
|
rs56411402
|
- |
- |
|
rs564547553
|
- |
- |
|
rs564792232
|
- |
- |
|
rs564873625
|
- |
- |
|
rs565428059
|
- |
- |
|
rs565509522
|
- |
- |
|
rs565913809
|
- |
- |
|
rs566453434
|
Pathogenic/Likely pathogenic |
not provided|Fructose-biphosphatase deficiency [MedGen:C3661900|MONDO:MONDO:0009251,MedGen:C0016756,OMIM:229700,Orphanet:348] |
|
rs566644923
|
- |
- |
|
rs567024602
|
- |
- |
|
rs56709544
|
- |
- |
|
rs56800285
|
LB/B |
- |
|
rs568056192
|
- |
- |
|
rs570650527
|
- |
- |
|
rs571416651
|
- |
- |
|
rs573040804
|
- |
- |
|
rs574110525
|
- |
- |
|
rs574124428
|
- |
- |
|
rs574370650
|
- |
- |
|
rs574462231
|
- |
- |
|
rs57505750
|
- |
- |
|
rs575069462
|
- |
- |
|
rs575273220
|
- |
- |
|
rs575750582
|
- |
- |
|
rs575833641
|
- |
- |
|
rs575921260
|
- |
- |
|
rs576373242
|
- |
- |
|
rs577200385
|
- |
- |
|
rs577954688
|
- |
- |
|
rs57865060
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs57884381
|
- |
- |
|
rs5832
|
LB/B |
- |
|
rs5837
|
LB/B |
- |
|
rs587688416
|
Likely pathogenic |
3-hydroxy-3-methylglutaryl-CoA synthase deficiency [MONDO:MONDO:0011614,MedGen:C2751532,OMIM:605911,Orphanet:35701] |
|
rs587776983
|
Pathogenic |
Torsion dystonia 4|Hypomyelinating leukodystrophy 6 [MONDO:MONDO:0007493,MedGen:C1851943,OMIM:128101,Orphanet:98805|MONDO:MONDO:0012905,MedGen:C2676244,OMIM:612438,Orphanet:139441] |
|
rs587777173
|
Pathogenic |
Hereditary spastic paraplegia 45|not provided [MONDO:MONDO:0013165,MedGen:C3888209,OMIM:613162,Orphanet:320396|MedGen:C3661900] |
|
rs587777188
|
LP/P |
Acrodysostosis 2, with or without hormone resistance (ACRDYS2) [MIM:614613] |
|
rs587777190
|
Pathogenic/Likely pathogenic |
Spondylometaphyseal dysplasia-cone-rod dystrophy syndrome|not provided [MONDO:MONDO:0012160,MedGen:C1837073,OMIM:608940,Orphanet:85167|MedGen:C3661900] |
|
rs587777467
|
Pathogenic |
Hypomyelinating leukodystrophy 6|not provided [MONDO:MONDO:0012905,MedGen:C2676244,OMIM:612438,Orphanet:139441|MedGen:C3661900] |
|
rs587777468
|
Pathogenic |
Hypomyelinating leukodystrophy 6 [MONDO:MONDO:0012905,MedGen:C2676244,OMIM:612438,Orphanet:139441] |
|
rs587777468
|
Pathogenic |
Hypomyelinating leukodystrophy 6|not provided|Torsion dystonia 4 [MONDO:MONDO:0012905,MedGen:C2676244,OMIM:612438,Orphanet:139441|MedGen:CN517202|MONDO:MONDO:0007493,MedGen:C1851943,OMIM:128101,Orphanet:98805] |
|
rs587777775
|
Pathogenic |
Neu-Laxova syndrome 1 [MONDO:MONDO:0009736,MedGen:C4551478,OMIM:256520,Orphanet:2671,Orphanet:583607] |
|
rs587777777
|
LP/P |
Neu-Laxova syndrome 2 (NLS2) [MIM:616038] |
|
rs587777861
|
LP/P |
Developmental and epileptic encephalopathy 31A (DEE31A) [MIM:616346] |
|
rs587779770
|
Likely pathogenic |
Baraitser-Winter syndrome 1|not provided [MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995|MedGen:C3661900] |
|
rs587779771
|
Likely pathogenic |
Baraitser-Winter syndrome 1|not provided [MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995|MedGen:CN517202] |
|
rs587779777
|
Pathogenic/Likely pathogenic |
Baraitser-Winter syndrome 1|not provided|ACTB-related BAFopathy|Inborn genetic diseases [MONDO:MONDO:0009470,MedGen:C1855722,OMIM:243310,Orphanet:2649,Orphanet:2995|MedGen:C3661900||MeSH:D030342,MedGen:C0950123] |
|
rs587780346
|
Pathogenic/Likely pathogenic |
Gestational diabetes|not provided|Monogenic diabetes|Maturity onset diabetes mellitus in young [Human Phenotype Ontology:HP:0009800,MONDO:MONDO:0005406,MedGen:C0085207|MedGen:C3661900|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552] |
|
rs587780587
|
Likely pathogenic |
Mitochondrial DNA depletion syndrome 3 (hepatocerebral type) [MONDO:MONDO:0009636,MedGen:C5191055,OMIM:251880,Orphanet:279934] |
|
rs587783037
|
Pathogenic |
Bloom syndrome|Hereditary cancer-predisposing syndrome|not provided [MONDO:MONDO:0008876,MedGen:C0005859,OMIM:210900,Orphanet:125|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MedGen:C3661900] |
|
rs587783625
|
US |
Weaver syndrome (WVS) [MIM:277590] |
|
rs587783700
|
Likely pathogenic |
Kabuki syndrome 1 [MONDO:MONDO:0007843,MedGen:CN030661,OMIM:147920,Orphanet:2322] |
|
rs587783702
|
Likely pathogenic |
Kabuki syndrome 1 [MONDO:MONDO:0007843,MedGen:CN030661,OMIM:147920,Orphanet:2322] |
|
rs587784160
|
Pathogenic |
Sotos syndrome [MedGen:C0175695,OMIM:117550,Orphanet:821] |
|
rs587784171
|
Pathogenic |
not provided|Sotos syndrome [MedGen:C3661900|MedGen:C0175695,OMIM:117550,Orphanet:821] |
|
rs587784176
|
LP/P |
Sotos syndrome (SOTOS) [MIM:117550] |
|
rs587784177
|
LP/P |
Sotos syndrome (SOTOS) [MIM:117550] |
|
rs587784178
|
Pathogenic |
not provided|Sotos syndrome [MedGen:C3661900|MedGen:C0175695,OMIM:117550,Orphanet:821] |
|
rs587784495
|
Pathogenic |
Lissencephaly due to TUBA1A mutation|Tubulinopathy [MONDO:MONDO:0012703,MedGen:C4305153,OMIM:611603,Orphanet:171680|MONDO:MONDO:0100153,MedGen:CN850169] |
|
rs5908
|
LB/B |
- |
|
rs59086055
|
- |
- |
|
rs59734894
|
- |
- |
|
rs61729604
|
- |
- |
|
rs61729685
|
- |
- |
|
rs61748122
|
LB/B |
- |
|
rs61748123
|
LB/B |
- |
|
rs61748126
|
LB/B |
- |
|
rs61751139
|
- |
- |
|
rs61751148
|
- |
- |
|
rs61752786
|
Likely pathogenic |
Congenital adrenal hyperplasia|Deficiency of steroid 11-beta-monooxygenase|Deficiency of steroid 11-beta-monooxygenase [Human Phenotype Ontology:HP:0008258,MONDO:MONDO:0018479,MedGen:C0001627,Orphanet:418|MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795|MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795]; Glucocorticoid-remediable aldosteronism [MONDO:MONDO:0007080,MedGen:C3838731,OMIM:103900,Orphanet:403] |
|
rs61754278
|
LP/P |
Adrenal hyperplasia 5 (AH5) [MIM:202110] |
|
rs61755740
|
- |
- |
|
rs61814453
|
- |
- |
|
rs62163561
|
- |
- |
|
rs62165871
|
- |
- |
|
rs62225862
|
- |
- |
|
rs62507326
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62507332
|
Pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62507335
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62507338
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:CN517202|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62507340
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62507347
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62508573
|
Pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62508578
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62508580
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62508588
|
- |
- |
|
rs62508588
|
LP/P |
Non-phenylketonuria hyperphenylalaninemia (Non-PKU HPA) [MIM:261600] |
|
rs62508694
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62508698
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62508698
|
Pathogenic |
Phenylketonuria|not provided|Inborn genetic diseases|Polymicrogyria, perisylvian, with cerebellar hypoplasia and arthrogryposis [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716|MedGen:C3661900|MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0014679,MedGen:C4225295,OMIM:616531] |
|
rs62508731
|
Likely pathogenic |
not provided|Phenylketonuria [MedGen:CN517202|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62508734
|
Pathogenic |
Phenylketonuria|not provided [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716|MedGen:C3661900] |
|
rs62508739
|
Pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62508752
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62509017
|
Pathogenic/Likely pathogenic |
not provided|Phenylketonuria [MedGen:C3661900|MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs62514902
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62514957
|
- |
- |
|
rs62514957
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62514958
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62514959
|
Pathogenic |
Phenylketonuria|not provided [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716|MedGen:C3661900] |
|
rs62516062
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62517181
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62529832
|
- |
- |
|
rs62621664
|
LB/B |
- |
|
rs62621664
|
Likely pathogenic |
Succinate-semialdehyde dehydrogenase deficiency [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22] |
|
rs62626305
|
Pathogenic |
HSD10 mitochondrial disease [MONDO:MONDO:0010327,MedGen:C3266731,OMIM:300438,Orphanet:391417,Orphanet:85295] |
|
rs62635346
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62642916
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62642918
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62642928
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62642930
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62642931
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62642934
|
LP/P |
Non-phenylketonuria hyperphenylalaninemia (Non-PKU HPA) [MIM:261600] |
|
rs62642942
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62642944
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs62644503
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs629682
|
- |
- |
|
rs662
|
- |
- |
|
rs66550389
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs66583685
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs66626662
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs66642398
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs66867430
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs671
|
- |
- |
|
rs671
|
LP/P |
AMED syndrome, digenic (AMEDS) [MIM:619151] |
|
rs67156896
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs67284661
|
Likely pathogenic |
not provided|Ornithine carbamoyltransferase deficiency [MedGen:C3661900|MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664] |
|
rs67418243
|
Pathogenic |
not provided|Ornithine carbamoyltransferase deficiency [MedGen:C3661900|MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664] |
|
rs67468335
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs67501347
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs67784355
|
LB/B |
- |
|
rs67870244
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs67960011
|
Pathogenic |
Ornithine carbamoyltransferase deficiency|not provided [MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664|MedGen:C3661900] |
|
rs67993095
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs68026851
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs6943147
|
- |
- |
|
rs6970210
|
LB/B |
- |
|
rs71647871
|
LB/B |
- |
|
rs7225107
|
LB/B |
- |
|
rs72483511
|
- |
- |
|
rs72549378
|
LP/P |
Glaucoma 3, primary congenital, A (GLC3A) [MIM:231300] |
|
rs72552267
|
LB/B |
- |
|
rs72552283
|
LP/P |
Succinic semialdehyde dehydrogenase deficiency (SSADHD) [MIM:271980] |
|
rs72552799
|
LB/B |
- |
|
rs72554331
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72554332
|
Pathogenic |
not provided|Ornithine carbamoyltransferase deficiency [MedGen:C3661900|MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664] |
|
rs72554339
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72554342
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72554344
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72554654
|
LP/P |
Menkes disease (MNK) [MIM:309400] |
|
rs72555362
|
LP/P |
Mucopolysaccharidosis 4B (MPS4B) [MIM:253010] |
|
rs72555364
|
LP/P |
Mucopolysaccharidosis 4B (MPS4B) [MIM:253010] |
|
rs72556254
|
Pathogenic |
Ornithine carbamoyltransferase deficiency [MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664] |
|
rs72556257
|
Pathogenic |
not provided|Ornithine carbamoyltransferase deficiency [MedGen:CN517202|MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664] |
|
rs72556272
|
Likely pathogenic |
Ornithine carbamoyltransferase deficiency [MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664] |
|
rs72556274
|
Likely pathogenic |
Ornithine carbamoyltransferase deficiency [MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664] |
|
rs72556276
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72556300
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72558181
|
Pathogenic |
Hepatic methionine adenosyltransferase deficiency|not provided [MONDO:MONDO:0009607,MedGen:C0268621,OMIM:250850,Orphanet:168598|MedGen:C3661900] |
|
rs72558189
|
- |
- |
|
rs72558191
|
Pathogenic |
Warfarin response [MONDO:MONDO:0007390,MedGen:C0750384,OMIM:122700] |
|
rs72558192
|
- |
- |
|
rs72558403
|
Pathogenic |
Ornithine carbamoyltransferase deficiency [MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664] |
|
rs72558404
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72558406
|
Pathogenic/Likely pathogenic |
not provided|Ornithine carbamoyltransferase deficiency [MedGen:C3661900|MONDO:MONDO:0010703,MedGen:C0268542,OMIM:311250,Orphanet:664] |
|
rs72558407
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72558442
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72558443
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72558444
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72558448
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72558449
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72558450
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72558463
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72558464
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72558465
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72558478
|
LP/P |
Ornithine carbamoyltransferase deficiency (OTCD) [MIM:311250] |
|
rs72624967
|
- |
- |
|
rs727503093
|
Likely pathogenic |
Non-small cell lung carcinoma|Costello syndrome [Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|MONDO:MONDO:0009026,MedGen:C0587248,OMIM:218040,Orphanet:3071] |
|
rs727503108
|
Pathogenic/Likely pathogenic |
Non-small cell lung carcinoma|Cardio-facio-cutaneous syndrome [Human Phenotype Ontology:HP:0030358,MONDO:MONDO:0005233,MeSH:D002289,MedGen:C0007131|MONDO:MONDO:0015280,MedGen:C1275081,OMIM:PS115150,Orphanet:1340]; Noonan syndrome|not provided|RASopathy [MONDO:MONDO:0018997,MeSH:D009634,MedGen:C0028326,OMIM:PS163950,Orphanet:648|MedGen:C3661900|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391] |
|
rs727503109
|
LP/P |
Noonan syndrome 3 (NS3) [MIM:609942] |
|
rs727503109
|
Pathogenic/Likely pathogenic |
RASopathy|not provided|Cardio-facio-cutaneous syndrome [MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391|MedGen:C3661900|MONDO:MONDO:0015280,MedGen:C1275081,OMIM:PS115150,Orphanet:1340]; Noonan syndrome|Cardiofaciocutaneous syndrome 1|Cardiovascular phenotype [MONDO:MONDO:0018997,MeSH:D009634,MedGen:C0028326,OMIM:PS163950,Orphanet:648|MONDO:MONDO:0007265,MedGen:CN029449,OMIM:115150,Orphanet:1340|MedGen:CN230736] |
|
rs727503110
|
LP/P |
Noonan syndrome 3 (NS3) [MIM:609942] |
|
rs727503110
|
Pathogenic |
Noonan syndrome|not provided|RASopathy|not specified|Noonan syndrome 3 [MONDO:MONDO:0018997,MeSH:D009634,MedGen:C0028326,OMIM:PS163950,Orphanet:648|MedGen:C3661900|MONDO:MONDO:0021060,MedGen:C5555857,Orphanet:536391|MedGen:CN169374|MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648]; Cardiofaciocutaneous syndrome 2|Hereditary diffuse gastric adenocarcinoma|Noonan syndrome 3|12 conditions [MONDO:MONDO:0014112,MedGen:C3809005,OMIM:615278,Orphanet:1340|MONDO:MONDO:0007648,MedGen:C1708349,OMIM:137215,Orphanet:26106|MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648|12 conditions] |
|
rs727503942
|
- |
- |
|
rs727503963
|
LP/P |
3-hydroxy-3-methylglutaryl-CoA lyase deficiency (HMGCLD) [MIM:246450] |
|
rs727503963
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of hydroxymethylglutaryl-CoA lyase|Long chain 3-hydroxyacyl-CoA dehydrogenase deficiency|HMGCL-related condition [MedGen:C3661900|MONDO:MONDO:0009520,MedGen:C0268601,OMIM:246450,Orphanet:20|MONDO:MONDO:0012173,MedGen:C3711645,OMIM:609016,Orphanet:5|] |
|
rs727505292
|
US |
Fabry disease (FD) [MIM:301500] |
|
rs730880029
|
Pathogenic |
Amyotrophic lateral sclerosis type 22 [MONDO:MONDO:0014531,MedGen:C4015512,OMIM:616208,Orphanet:803] |
|
rs730880451
|
LP/P |
Fabry disease (FD) [MIM:301500] |
|
rs730880460
|
Pathogenic |
not provided|Costello syndrome [MedGen:C3661900|MONDO:MONDO:0009026,MedGen:C0587248,OMIM:218040,Orphanet:3071] |
|
rs730880471
|
Likely pathogenic |
not provided|Noonan syndrome 3|Autoimmune lymphoproliferative syndrome type 4 [MedGen:CN517202|MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648|MONDO:MONDO:0013767,MedGen:C2674723,OMIM:614470,Orphanet:268114]; Acute myeloid leukemia [Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519]; Cardiofaciocutaneous syndrome 2 [MONDO:MONDO:0014112,MedGen:C3809005,OMIM:615278,Orphanet:1340]; Noonan syndrome 3|KRAS-related RASopathy [MONDO:MONDO:0012371,MedGen:C1860991,OMIM:609942,Orphanet:648|] |
|
rs730880965
|
Pathogenic/Likely pathogenic |
not provided|Noonan syndrome 6 [MedGen:CN517202|MONDO:MONDO:0013186,MedGen:C2750732,OMIM:613224,Orphanet:648] |
|
rs73106685
|
LB/B |
- |
|
rs74205173
|
- |
- |
|
rs74315507
|
Pathogenic |
Neutrophil immunodeficiency syndrome [MONDO:MONDO:0011988,MedGen:C1842398,OMIM:608203,Orphanet:183707] |
|
rs74428123
|
- |
- |
|
rs74451421
|
- |
- |
|
rs74503222
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs745352941
|
- |
- |
|
rs745389409
|
- |
- |
|
rs745404241
|
Pathogenic/Likely pathogenic |
Citrullinemia type I|Citrullinemia [MONDO:MONDO:0008988,MedGen:C4721769,OMIM:215700,Orphanet:247525|Human Phenotype Ontology:HP:0032397,MONDO:MONDO:0015991,MedGen:C0175683,Orphanet:187] |
|
rs745419881
|
- |
- |
|
rs745423719
|
- |
- |
|
rs745572671
|
- |
- |
|
rs745602817
|
- |
- |
|
rs745614904
|
- |
- |
|
rs745620101
|
Pathogenic/Likely pathogenic |
Galactosylceramide beta-galactosidase deficiency|not provided [MONDO:MONDO:0009499,MedGen:C0023521,OMIM:245200,Orphanet:487|MedGen:C3661900] |
|
rs745656120
|
LP/P |
Ethylmalonic encephalopathy (EE) [MIM:602473] |
|
rs745677091
|
- |
- |
|
rs745806214
|
- |
- |
|
rs745844469
|
Likely pathogenic |
Medium-chain acyl-coenzyme A dehydrogenase deficiency [MONDO:MONDO:0008721,MedGen:C0220710,OMIM:201450,Orphanet:42] |
|
rs745967575
|
- |
- |
|
rs74603784
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs746133481
|
- |
- |
|
rs746163132
|
- |
- |
|
rs746203167
|
- |
- |
|
rs746219370
|
Pathogenic |
Methylmalonic aciduria, cblB type|not provided|Inborn genetic diseases [MONDO:MONDO:0009614,MedGen:C1855102,OMIM:251110,Orphanet:28,Orphanet:79311|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs746316064
|
- |
- |
|
rs746356539
|
- |
- |
|
rs746363298
|
- |
- |
|
rs746419489
|
Pathogenic |
Primary hyperoxaluria type 3|not provided [MONDO:MONDO:0013327,MedGen:C3150878,OMIM:613616,Orphanet:416,Orphanet:93600|MedGen:C3661900] |
|
rs746575551
|
Likely pathogenic |
Classic homocystinuria [MONDO:MONDO:0009352,MedGen:C0751202,OMIM:236200,Orphanet:394] |
|
rs746699081
|
- |
- |
|
rs746780985
|
- |
- |
|
rs746854963
|
- |
- |
|
rs746871094
|
- |
- |
|
rs746913146
|
Pathogenic |
not provided|Maturity onset diabetes mellitus in young|Monogenic diabetes [MedGen:C3661900|Human Phenotype Ontology:HP:0004904,MONDO:MONDO:0018911,MedGen:C0342276,OMIM:606391,Orphanet:552|MONDO:MONDO:0015967,MedGen:C3888631,Orphanet:183625] |
|
rs747043550
|
Likely pathogenic |
Primary hyperoxaluria, type I [MONDO:MONDO:0009823,MedGen:C0268164,OMIM:259900,Orphanet:416,Orphanet:93598] |
|
rs747089244
|
- |
- |
|
rs747097960
|
LP/P |
Pyruvate kinase deficiency of red cells (PKRD) [MIM:266200] |
|
rs747199032
|
- |
- |
|
rs747199032
|
Pathogenic |
GNE myopathy|GNE myopathy [MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602|MONDO:MONDO:0011603,MedGen:C1853926,OMIM:605820,Orphanet:602]; Sialuria|not provided [MONDO:MONDO:0010028,MedGen:C0342853,OMIM:269921,Orphanet:3166|MedGen:C3661900] |
|
rs747209153
|
- |
- |
|
rs747262651
|
- |
- |
|
rs747273688
|
- |
- |
|
rs747274803
|
- |
- |
|
rs747280993
|
- |
- |
|
rs747281324
|
LP/P |
Bloom syndrome (BLM) [MIM:210900] |
|
rs747319728
|
- |
- |
|
rs747367976
|
- |
- |
|
rs74744080
|
- |
- |
|
rs747480526
|
Pathogenic/Likely pathogenic |
Complex cortical dysplasia with other brain malformations 1|not provided|Inborn genetic diseases [MONDO:MONDO:0013541,MedGen:C3808397,OMIM:614039,Orphanet:300570|MedGen:C3661900|MeSH:D030342,MedGen:C0950123] |
|
rs747544959
|
- |
- |
|
rs747608698
|
- |
- |
|
rs747624770
|
Pathogenic/Likely pathogenic |
Congenital microcephaly - severe encephalopathy - progressive cerebral atrophy syndrome|not provided [MONDO:MONDO:0014258,MedGen:C3809971,OMIM:615574,Orphanet:391376|MedGen:C3661900] |
|
rs747714452
|
Pathogenic/Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs747747667
|
- |
- |
|
rs747837917
|
- |
- |
|
rs747847507
|
- |
- |
|
rs747951792
|
- |
- |
|
rs747971446
|
- |
- |
|
rs748170674
|
Pathogenic |
Succinate-semialdehyde dehydrogenase deficiency [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22] |
|
rs748190164
|
US |
GM2-gangliosidosis 1 (GM2G1) [MIM:272800] |
|
rs748225017
|
- |
- |
|
rs748242677
|
- |
- |
|
rs748277180
|
- |
- |
|
rs748303093
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of acetyl-CoA acetyltransferase [MedGen:C3661900|MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs748318386
|
Pathogenic/Likely pathogenic |
not provided|Inborn genetic diseases|3-methylglutaconic aciduria type 1 [MedGen:C3661900|MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0009610,MedGen:C0342727,OMIM:250950,Orphanet:67046] |
|
rs748337518
|
- |
- |
|
rs748337823
|
Pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs748408705
|
- |
- |
|
rs748439275
|
Likely pathogenic |
Deficiency of aromatic-L-amino-acid decarboxylase [MONDO:MONDO:0012084,MedGen:C1291564,OMIM:608643,Orphanet:35708] |
|
rs748571395
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs748682601
|
Pathogenic |
Pyruvate dehydrogenase E3 deficiency [MONDO:MONDO:0009529,MedGen:C5574660,OMIM:246900,Orphanet:2394,Orphanet:765] |
|
rs748683840
|
- |
- |
|
rs748725086
|
- |
- |
|
rs748780943
|
- |
- |
|
rs748793710
|
- |
- |
|
rs748809586
|
- |
- |
|
rs748837763
|
- |
- |
|
rs748902766
|
Pathogenic/Likely pathogenic |
not provided|Retinal dystrophy|Leber congenital amaurosis 9 [MedGen:C3661900|Human Phenotype Ontology:HP:0000556,Human Phenotype Ontology:HP:0007736,Human Phenotype Ontology:HP:0007910,Human Phenotype Ontology:HP:0007974,Human Phenotype Ontology:HP:0007982,MONDO:MONDO:0019118,MeSH:D058499,MedGen:C0854723,Orphanet:71862|MONDO:MONDO:0012056,MedGen:C1837873,OMIM:608553,Orphanet:65] |
|
rs748925635
|
Pathogenic |
ALDH18A1-related de Barsy syndrome|not provided [MONDO:MONDO:0009053,MedGen:C5234852,OMIM:219150,Orphanet:2962,Orphanet:35664|MedGen:C3661900] |
|
rs748930040
|
- |
- |
|
rs748947397
|
- |
- |
|
rs749042624
|
- |
- |
|
rs749093544
|
- |
- |
|
rs749145675
|
- |
- |
|
rs749209037
|
- |
- |
|
rs749211062
|
- |
- |
|
rs749246739
|
LP/P |
Desbuquois dysplasia 1 (DBQD1) [MIM:251450] |
|
rs749313159
|
- |
- |
|
rs749406391
|
- |
- |
|
rs749461746
|
- |
- |
|
rs749484894
|
Pathogenic/Likely pathogenic |
Severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-negative, NK cell-negative, due to adenosine deaminase deficiency [MONDO:MONDO:0007064,MedGen:C1863236,OMIM:102700,Orphanet:277] |
|
rs749485571
|
- |
- |
|
rs749568989
|
- |
- |
|
rs749574339
|
- |
- |
|
rs749670133
|
- |
- |
|
rs749698460
|
- |
- |
|
rs749729349
|
- |
- |
|
rs749758687
|
LP/P |
Methylmalonic aciduria type cblB (MMAB) [MIM:251110] |
|
rs749758704
|
- |
- |
|
rs749803238
|
- |
- |
|
rs749803238
|
Pathogenic/Likely pathogenic |
Ethylmalonic encephalopathy|not provided [MONDO:MONDO:0011229,MedGen:C1865349,OMIM:602473,Orphanet:51188|MedGen:C3661900] |
|
rs749866079
|
LP/P |
Hypervalinemia and hyperleucine-isoleucinemia (HVLI) [MIM:618850] |
|
rs749994897
|
- |
- |
|
rs750018725
|
- |
- |
|
rs750026492
|
Pathogenic/Likely pathogenic |
Hereditary fructosuria [Human Phenotype Ontology:HP:0005973,MONDO:MONDO:0009249,MedGen:C0016751,OMIM:229600,Orphanet:469] |
|
rs750090886
|
- |
- |
|
rs750176786
|
LP/P |
Neurodegeneration with brain iron accumulation 1 (NBIA1) [MIM:234200] |
|
rs750195919
|
Likely pathogenic |
Deficiency of acetyl-CoA acetyltransferase [MONDO:MONDO:0008760,MedGen:C1536500,OMIM:203750,Orphanet:134] |
|
rs750203790
|
- |
- |
|
rs750389182
|
- |
- |
|
rs750433997
|
- |
- |
|
rs750452858
|
- |
- |
|
rs750496798
|
LP/P |
Mucopolysaccharidosis 1H/S (MPS1H/S) [MIM:607015] |
|
rs750510348
|
- |
- |
|
rs750515748
|
Pathogenic |
Tatton-Brown-Rahman overgrowth syndrome [MONDO:MONDO:0014382,MedGen:C4014545,OMIM:615879,Orphanet:404443] |
|
rs750541652
|
- |
- |
|
rs750594890
|
Pathogenic |
Maple syrup urine disease [MONDO:MONDO:0009563,MeSH:D008375,MedGen:C0024776,OMIM:PS248600,Orphanet:511] |
|
rs750632554
|
- |
- |
|
rs750660594
|
- |
- |
|
rs750670270
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs750714549
|
- |
- |
|
rs750765230
|
- |
- |
|
rs750849178
|
LP/P |
Immunodeficiency-centromeric instability-facial anomalies syndrome 1 (ICF1) [MIM:242860] |
|
rs750905647
|
- |
- |
|
rs750918391
|
- |
- |
|
rs750974539
|
Pathogenic/Likely pathogenic |
not provided|Primary hyperoxaluria type 3 [MedGen:C3661900|MONDO:MONDO:0013327,MedGen:C3150878,OMIM:613616,Orphanet:416,Orphanet:93600] |
|
rs750982871
|
- |
- |
|
rs751012777
|
- |
- |
|
rs751141
|
LB/B |
- |
|
rs751156234
|
- |
- |
|
rs751202598
|
- |
- |
|
rs751203209
|
Likely pathogenic |
Phenylketonuria [MONDO:MONDO:0009861,MedGen:C0031485,OMIM:261600,Orphanet:716] |
|
rs751223752
|
US |
Neurodevelopmental disorder with cardiomyopathy, spasticity, and brain abnormalities (NEDCASB) [MIM:619121] |
|
rs751305531
|
- |
- |
|
rs751350053
|
- |
- |
|
rs751383208
|
- |
- |
|
rs751393950
|
Pathogenic/Likely pathogenic |
Tay-Sachs disease [MONDO:MONDO:0010100,MedGen:C0039373,OMIM:272800,Orphanet:845] |
|
rs751395832
|
- |
- |
|
rs751451775
|
- |
- |
|
rs751571666
|
- |
- |
|
rs751600310
|
- |
- |
|
rs751703979
|
LP/P |
Interstitial nephritis, karyomegalic (KMIN) [MIM:614817] |
|
rs751816050
|
- |
- |
|
rs751841116
|
- |
- |
|
rs751888532
|
Pathogenic/Likely pathogenic |
Succinate-semialdehyde dehydrogenase deficiency|not provided|ALDH5A1-related condition [MONDO:MONDO:0010083,MedGen:C0268631,OMIM:271980,Orphanet:22|MedGen:C3661900|] |
|
rs751894166
|
- |
- |
|
rs75193786
|
LP/P |
Phenylketonuria (PKU) [MIM:261600] |
|
rs751972865
|
LP/P |
Erythrocytosis, familial, 8 (ECYT8) [MIM:222800] |
|
rs752007321
|
- |
- |
|
rs7520453
|
- |
- |
|
rs752054462
|
- |
- |
|
rs75205792
|
- |
- |
|
rs752087770
|
- |
- |
|
rs752127722
|
- |
- |
|
rs752132182
|
- |
- |
|
rs752133024
|
- |
- |
|
rs752157350
|
- |
- |
|
rs752258545
|
- |
- |
|
rs752311258
|
- |
- |
|
rs752339705
|
- |
- |
|
rs752339705
|
LP/P |
Carbamoyl phosphate synthetase 1 deficiency (CPS1D) [MIM:237300] |
|
rs752456881
|
LB/B |
- |
|
rs752563477
|
- |
- |
|
rs752669339
|
LP/P |
Spastic paraplegia 9B, autosomal recessive (SPG9B) [MIM:616586] |
|
rs752669339
|
Likely pathogenic |
Autosomal recessive complex spastic paraplegia type 9B|Cutis laxa, autosomal dominant 3|Cutis laxa, autosomal dominant 3 [MONDO:MONDO:0014702,MedGen:C5568980,OMIM:616586,Orphanet:447760|MONDO:MONDO:0014706,MedGen:C4225268,OMIM:616603,Orphanet:90348|MONDO:MONDO:0014706,MedGen:C4225268,OMIM:616603,Orphanet:90348]; Autosomal dominant spastic paraplegia type 9 [MONDO:MONDO:0015091,MedGen:C1832669]; de Barsy syndrome [MONDO:MONDO:0017569,MedGen:C0268354,Orphanet:2962] |
|
rs752691887
|
- |
- |
|
rs752731774
|
- |
- |
|
rs752767411
|
- |
- |
|
rs752807581
|
- |
- |
|
rs752811843
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of steroid 17-alpha-monooxygenase [MedGen:C3661900|MONDO:MONDO:0008730,MedGen:C0268285,OMIM:202110,Orphanet:90793] |
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rs752819438
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- |
- |
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rs752823953
|
- |
- |
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rs752838004
|
- |
- |
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rs752838693
|
- |
- |
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rs752868920
|
- |
- |
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rs752931737
|
- |
- |
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rs753034981
|
- |
- |
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rs753068609
|
- |
- |
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rs753228876
|
- |
- |
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rs753258609
|
- |
- |
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rs753265856
|
- |
- |
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rs753270728
|
- |
- |
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rs753288504
|
- |
- |
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rs753379195
|
- |
- |
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rs753407393
|
- |
- |
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rs753521841
|
- |
- |
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rs753617532
|
- |
- |
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rs753623153
|
- |
- |
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rs753634322
|
- |
- |
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rs753635972
|
LP/P |
Neurodevelopmental disorder with microcephaly, epilepsy, and hypomyelination (NEDMEHM) [MIM:618367] |
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rs753704338
|
- |
- |
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rs753721054
|
- |
- |
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rs753774484
|
Pathogenic/Likely pathogenic |
not provided|Deficiency of steroid 11-beta-monooxygenase|Congenital adrenal hyperplasia [MedGen:C3661900|MONDO:MONDO:0008729,MedGen:C0268292,OMIM:202010,Orphanet:90795|Human Phenotype Ontology:HP:0008258,MONDO:MONDO:0018479,MedGen:C0001627,Orphanet:418] |
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rs753816946
|
- |
- |
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rs753830206
|
- |
- |
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rs753866967
|
LP/P |
Myasthenic syndrome, congenital, 12 (CMS12) [MIM:610542] |
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rs75391579
|
LP/P |
Galactosemia 1 (GALAC1) [MIM:230400] |
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rs753936155
|
- |
- |
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rs754008203
|
- |
- |
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rs754015864
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
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rs754049561
|
- |
- |
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rs754054554
|
- |
- |
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rs754079169
|
- |
- |
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rs754154200
|
LP/P |
Mucopolysaccharidosis 1H (MPS1H) [MIM:607014] |
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rs754160997
|
- |
- |
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rs754185312
|
- |
- |
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rs754259099
|
Likely pathogenic |
Arginase deficiency [MONDO:MONDO:0008814,MedGen:C0268548,OMIM:207800,Orphanet:90] |
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rs754312469
|
- |
- |
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rs754337553
|
- |
- |
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rs754406296
|
- |
- |
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rs754465217
|
- |
- |
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rs754529217
|
- |
- |
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rs754563323
|
- |
- |
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rs754624667
|
- |
- |
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rs754829627
|
- |
- |
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rs754960642
|
- |
- |
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rs754966840
|
LP/P |
Mucopolysaccharidosis 1S (MPS1S) [MIM:607016] |
|
rs754966840
|
Pathogenic/Likely pathogenic |
Mucopolysaccharidosis type 1|not provided|Mucopolysaccharidosis, MPS-I-S [MONDO:MONDO:0001586,MedGen:C0023786,Orphanet:579|MedGen:C3661900|MONDO:MONDO:0011760,MedGen:C0026708,OMIM:607016,Orphanet:93474]; Hurler syndrome [Human Phenotype Ontology:HP:0000943,MONDO:MONDO:0011758,MedGen:C0086795,OMIM:607014,Orphanet:93473]; Mucopolysaccharidosis, MPS-I-H/S [MONDO:MONDO:0011759,MedGen:C0086431,OMIM:607015,Orphanet:93476] |
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rs754967473
|
- |
- |
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rs754967473
|
LP/P |
Galactosemia 2 (GALAC2) [MIM:230200] |
|
rs754980119
|
LP/P |
Homocystinuria due to deficiency of N(5,10)-methylenetetrahydrofolate reductase activity (MTHFRD) [MIM:236250] |
|
rs754980119
|
Pathogenic/Likely pathogenic |
Homocystinuria due to methylene tetrahydrofolate reductase deficiency|not provided|Homocystinuria due to methylene tetrahydrofolate reductase deficiency [MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395|MedGen:C3661900|MONDO:MONDO:0009353,MedGen:C1856058,OMIM:236250,Orphanet:395]; Thrombophilia due to thrombin defect [MONDO:MONDO:0008559,MedGen:C3160733,OMIM:188050]; Neural tube defects, folate-sensitive [MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823]; Schizophrenia|Neural tube defects, folate-sensitive [Human Phenotype Ontology:HP:0100753,MONDO:MONDO:0005090,MeSH:D012559,MedGen:C0036341,OMIM:181500|MONDO:MONDO:0011120,MedGen:C1866558,OMIM:601634,Orphanet:823] |
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